F280818

General Info

Members Datasets Scaffolds Average Seq Length
183 130 173 207

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10005868|Ga0105238_1000586817
Length 225
Sequence MTDDIEQRSDDWFAVRCGKATASKIADIIAKTKSGPAASRVNYMAQLVSERLTGVAERGFSNAAMQWGCDFEADARAAYSFREDADVIQVAFVDHPTIAMSGASPDGLVDEDGLVEIKCPNTATHIETLLSGAVPEKYRTQMLWQMACTDRKWCDFVSYDPRLPERMRLFVTRVHRDEAAIADLEDAVAVFLKEVADKVSALRAIYDPQPANDEADNLVNLLRAG

Samples

Sample ID Description Type Environment
1 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
2 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
3 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
4 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
5 2643221582 Rhizobium sp. Root651 Isolate Unclassified
6 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
7 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
8 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
9 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
10 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
54 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
80 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
93 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
94 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
95 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
96 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
97 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
120 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
121 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
122 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
129 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
130 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.54
Metatranscriptomes 0
Isolates 5.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.37
Nodule 1.64
Rhizoplane 6.01
Rhizosphere 82.51
Stem 0
Stem Tuber 0
Unclassified 5.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24742J22300_10007255 3300002244 Bacteria 1827
2 Ga0055530_10015422 3300003791 Viruses 2495
3 Ga0065165_1007640 3300005262 Bacteria 5257
4 Ga0065712_10073430 3300005290 Viruses 4392
5 Ga0065712_10076120 3300005290 Viruses 3727
6 Ga0070676_10353053 3300005328 Unclassified 1011
7 Ga0070683_100056425 3300005329 Bacteria 3648
8 Ga0070683_100313353 3300005329 Bacteria 1493
9 Ga0070690_100000239 3300005330 Bacteria 28291
10 Ga0070690_100365603 3300005330 Bacteria 1051
11 Ga0070670_100002477 3300005331 Bacteria 15231
12 Ga0070670_100003492 3300005331 Bacteria 13063
13 Ga0070666_10162524 3300005335 Unclassified 1561
14 Ga0070675_100000905 3300005354 Bacteria 21111
15 Ga0070675_100016473 3300005354 Bacteria 5869
16 Ga0070675_100123453 3300005354 Viruses 2202
17 Ga0070675_100685733 3300005354 Bacteria 932
18 Ga0070671_100109643 3300005355 Viruses 2318
19 Ga0070671_100243822 3300005355 Bacteria 1526
20 Ga0070673_100151881 3300005364 Bacteria 1962
21 Ga0070688_100093857 3300005365 Viruses 1966
22 Ga0070700_100063245 3300005441 Bacteria 2340
23 Ga0070678_100063261 3300005456 Bacteria 2737
24 Ga0068867_100634529 3300005459 Unclassified 935
25 Ga0070685_10009753 3300005466 Viruses 4977
26 Ga0070679_100151902 3300005530 Bacteria 2292
27 Ga0070672_100060653 3300005543 Unclassified 2979
28 Ga0070686_100018697 3300005544 Viruses 4074
29 Ga0070686_100031475 3300005544 Viruses 3244
30 Ga0070665_100000044 3300005548 Bacteria 276702
31 Ga0070665_100045996 3300005548 Viruses 4384
32 Ga0070665_100551438 3300005548 Bacteria 1165
33 Ga0068855_100052478 3300005563 Viruses 4800
34 Ga0068855_100831974 3300005563 Bacteria 979
35 Ga0068859_100000463 3300005617 Bacteria 40111
36 Ga0068864_100161703 3300005618 Bacteria 2036
37 Ga0068862_100215268 3300005844 Viruses 1737
38 Ga0097621_100785213 3300006237 Bacteria 881
39 Ga0075370_10099045 3300006353 Bacteria 1686
40 Ga0068871_100105178 3300006358 Unclassified 2368
41 Ga0068871_100829280 3300006358 Bacteria 854
42 Ga0068865_100254316 3300006881 Bacteria 1388
43 Ga0097620_100000463 3300006931 Bacteria 40111
44 Ga0111539_10932691 3300009094 Bacteria 1010
45 Ga0105242_10307999 3300009176 Bacteria 1448
46 Ga0105248_10176157 3300009177 Viruses 2410
47 Ga0105248_10582520 3300009177 Viruses 1262
48 Ga0105248_10882774 3300009177 Unclassified 1010
49 Ga0105238_10003079 3300009551 Bacteria 16633
50 Ga0105238_10005868 3300009551 Bacteria 12163
51 Ga0105249_10127007 3300009553 Bacteria 2430
52 Ga0105239_10000831 3300010375 Bacteria 43856
53 Ga0105239_10032043 3300010375 Bacteria 5776
54 Ga0105239_10159422 3300010375 Viruses 2520
55 Ga0157374_10454297 3300013296 Viruses 1283
56 Ga0157374_10496830 3300013296 Viruses 1224
57 Ga0163162_10971111 3300013306 Viruses 960
58 Ga0163162_11045299 3300013306 Unclassified 924
59 Ga0157375_10507053 3300013308 Viruses 1370
60 Ga0157375_11225703 3300013308 Viruses 881
61 Ga0163163_10489604 3300014325 Bacteria 1291
62 Ga0157380_10002723 3300014326 Bacteria 11990
63 Ga0182008_10000291 3300014497 Bacteria 39563
64 Ga0157376_10000909 3300014969 Bacteria 19237
65 Ga0182006_1112537 3300015261 Bacteria 954
66 Ga0182005_1000191 3300015265 Bacteria 41630
67 Ga0213876_10001300 3300021384 Bacteria 15725
68 Ga0209025_1006121 3300025294 Bacteria 9488
69 Ga0209050_1000127 3300025298 Bacteria 187951
70 Ga0209050_1003864 3300025298 Bacteria 10656
71 Ga0207697_10060751 3300025315 Bacteria 1572
72 Ga0207697_10091882 3300025315 Bacteria 1286
73 Ga0207697_10118567 3300025315 Bacteria 1137
74 Ga0207643_10034463 3300025908 Bacteria 2836
75 Ga0207663_10041453 3300025916 Viruses 2806
76 Ga0207652_11016878 3300025921 Bacteria 728
77 Ga0207694_10022512 3300025924 Bacteria 4782
78 Ga0207650_10001391 3300025925 Bacteria 17456
79 Ga0207650_10003043 3300025925 Bacteria 11543
80 Ga0207650_10666350 3300025925 Bacteria 878
81 Ga0207659_10001013 3300025926 Bacteria 16717
82 Ga0207659_10066229 3300025926 Unclassified 2621
83 Ga0207659_10197632 3300025926 Viruses 1604
84 Ga0207686_10001996 3300025934 Bacteria 11251
85 Ga0207670_10000552 3300025936 Bacteria 20727
86 Ga0207691_10155606 3300025940 Unclassified 2008
87 Ga0207691_10200504 3300025940 Bacteria 1737
88 Ga0207711_10122699 3300025941 Viruses 2321
89 Ga0207711_10750533 3300025941 Unclassified 910
90 Ga0207711_11181363 3300025941 Unclassified 706
91 Ga0207661_10033777 3300025944 Bacteria 3973
92 Ga0207661_10556107 3300025944 Bacteria 1051
93 Ga0207667_10003871 3300025949 Bacteria 18419
94 Ga0207667_10713665 3300025949 Bacteria 1004
95 Ga0207651_10118837 3300025960 Bacteria 2000
96 Ga0207702_10008098 3300026078 Bacteria 8893
97 Ga0207702_10171316 3300026078 Viruses 1991
98 Ga0207676_10011923 3300026095 Bacteria 6220
99 Ga0207676_10113313 3300026095 Bacteria 2273
100 Ga0207674_10070923 3300026116 Viruses 3503
101 Ga0207683_10841147 3300026121 Bacteria 852
102 Ga0207698_10000216 3300026142 Bacteria 35942
103 Ga0268266_10000002 3300028379 Bacteria 3059047
104 Ga0268266_10049050 3300028379 Viruses 3619
105 Ga0265338_10076104 3300028800 Bacteria 2844
106 Ga0265324_10018820 3300029957 Bacteria 2491
107 Ga0307509_10103299 3300031507 Bacteria 2878
108 Ga0307408_100107544 3300031548 Bacteria 2136
109 Ga0307408_100175353 3300031548 Bacteria 1715
110 Ga0307405_10147590 3300031731 Bacteria 1649
111 Ga0307412_10006856 3300031911 Bacteria 6464
112 Ga0307409_100455217 3300031995 Bacteria 1236
113 Ga0307416_100000162 3300032002 Bacteria 38202
114 Ga0395899_0001030 3300037312 Bacteria 25396
115 Ga0395900_0000588 3300037418 Bacteria 49918
116 Ga0395900_0612343 3300037418 Viruses 1028
117 Ga0395898_0008014 3300037466 Bacteria 11203
118 Ga0395905_0225863 3300037471 Viruses 1751
119 Ga0395905_0244217 3300037471 Bacteria 1677
120 Ga0395905_0281637 3300037471 Bacteria 1549
121 Ga0395901_0001417 3300038443 Bacteria 25049
122 Ga0395901_0044511 3300038443 Unclassified 4603
123 Ga0436365_1178938 3300039437 Bacteria 34813
124 Ga0450922_015478 3300042124 Bacteria 758
125 Ga0450923_001091 3300042125 Bacteria 3429
126 Ga0451577_0059214 3300042876 Viruses 3415
127 Ga0451577_0822611 3300042876 Bacteria 838
128 Ga0453683_0016496 3300044673 Unclassified 4764
129 Ga0453684_0013409 3300044712 Unclassified 13312
130 Ga0453684_0021190 3300044712 Bacteria 9730
131 Ga0453684_0021763 3300044712 Bacteria 9555
132 Ga0453684_0117261 3300044712 Viruses 3222
133 Ga0453684_0473690 3300044712 Unclassified 1390
134 Ga0466971_0016127 3300044719 Bacteria 3291
135 Ga0451576_0001788 3300045051 Bacteria 35248
136 Ga0451576_0005995 3300045051 Unclassified 15027
137 Ga0451576_0062894 3300045051 Viruses 3869
138 Ga0466958_0011500 3300045836 Bacteria 4984
139 Ga0466958_0137688 3300045836 Bacteria 1536
140 Ga0495592_0014656 3300046454 Bacteria 5951
141 Ga0495606_0033415 3300046507 Bacteria 3548
142 Ga0495620_0000174 3300046515 Bacteria 50528
143 Ga0495628_0017806 3300046516 Bacteria 5899
144 Ga0495630_0000146 3300046517 Bacteria 54905
145 Ga0495630_0000375 3300046517 Bacteria 35444
146 Ga0495632_0000442 3300046519 Bacteria 39532
147 Ga0495625_0002962 3300046660 Bacteria 17653
148 Ga0495625_0170448 3300046660 Bacteria 1454
149 Ga0495659_0001150 3300046664 Bacteria 9181
150 Ga0495599_0012402 3300046678 Bacteria 5252
151 Ga0495674_0032253 3300047319 Unclassified 4753
152 Ga0495674_0140035 3300047319 Bacteria 2034
153 Ga0495675_0000593 3300047444 Bacteria 23327
154 Ga0495626_0000905 3300048091 Bacteria 26197
155 Ga0496104_0313417 3300048907 Viruses 1482
156 Ga0496105_0137149 3300048908 Bacteria 2015
157 Ga0496108_0058301 3300048911 Unclassified 3245
158 Ga0496109_0001948 3300048912 Bacteria 17152
159 Ga0496113_0001846 3300048916 Bacteria 12058
160 Ga0496113_0029759 3300048916 Viruses 3947
161 Ga0496114_0617787 3300048917 Bacteria 955
162 Ga0496115_0000300 3300048918 Bacteria 42070
163 Ga0496121_0496206 3300048924 Bacteria 776
164 Ga0496122_0072414 3300048925 Bacteria 2450
165 Ga0496124_0000477 3300048927 Bacteria 68917
166 Ga0495678_000465 3300049459 Bacteria 40203
167 Ga0501034_0447308 3300049571 Bacteria 1210
168 Ga0501225_0004804 3300049705 Viruses 3998
169 Ga0501044_0000586 3300049823 Bacteria 44151
170 nmdc:mga07m45_31230_c2 3300050496 Bacteria 2479
171 nmdc:mga08y16_754310_c1 3300050511 Bacteria 969
172 Ga0500583_0001720 3300053092 Bacteria 6402
173 Ga0466962_0045955 3300061719 Bacteria 2087

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046515 Ga0495620_0000174 Ga0495620_0000174_41797_42306 167
2 3300049459 Ga0495678_000465 Ga0495678_000465_39303_39812 167
3 3300015261 Ga0182006_1112537 Ga0182006_11125372 168
4 3300046519 Ga0495632_0000442 Ga0495632_0000442_35559_36071 168
5 3300006353 Ga0075370_10099045 Ga0075370_100990452 180
6 3300050496 nmdc:mga07m45_31230_c2 nmdc:mga07m45_31230_c2_1049_1687 180
7 3300037471 Ga0395905_0281637 Ga0395905_0281637_15_650 182
8 3300049571 Ga0501034_0447308 Ga0501034_0447308_351_986 183
9 3300005441 Ga0070700_100063245 Ga0070700_1000632454 185
10 3300015265 Ga0182005_1000191 Ga0182005_10001916 185
11 3300005563 Ga0068855_100052478 Ga0068855_1000524788 188
12 3300010375 Ga0105239_10032043 Ga0105239_1003204310 188
13 3300010375 Ga0105239_10159422 Ga0105239_101594223 188
14 3300025949 Ga0207667_10003871 Ga0207667_1000387113 188
15 3300026078 Ga0207702_10171316 Ga0207702_101713164 188
16 3300026116 Ga0207674_10070923 Ga0207674_100709232 188
17 3300026142 Ga0207698_10000216 Ga0207698_100002168 188
18 3300048918 Ga0496115_0000300 Ga0496115_0000300_7145_7780 188
19 3300025294 Ga0209025_1006121 Ga0209025_100612112 189
20 3300026078 Ga0207702_10008098 Ga0207702_1000809821 189
21 3300005548 Ga0070665_100000044 Ga0070665_10000004495 190
22 3300028379 Ga0268266_10000002 Ga0268266_100000021986 190
23 3300046664 Ga0495659_0001150 Ga0495659_0001150_6707_7336 191
24 3300046454 Ga0495592_0014656 Ga0495592_0014656_3050_3685 193
25 3300014969 Ga0157376_10000909 Ga0157376_1000090928 196
26 3300025921 Ga0207652_11016878 Ga0207652_110168781 196
27 3300044712 Ga0453684_0473690 Ga0453684_0473690_280_900 200
28 3300045051 Ga0451576_0001788 Ga0451576_0001788_3110_3730 200
29 3300013296 Ga0157374_10454297 Ga0157374_104542973 201
30 3300031548 Ga0307408_100175353 Ga0307408_1001753532 201
31 3300044712 Ga0453684_0021763 Ga0453684_0021763_2773_3381 201
32 3300048907 Ga0496104_0313417 Ga0496104_0313417_673_1299 202
33 3300048908 Ga0496105_0137149 Ga0496105_0137149_873_1499 202
34 3300048912 Ga0496109_0001948 Ga0496109_0001948_13775_14401 202
35 3300048916 Ga0496113_0001846 Ga0496113_0001846_5540_6166 202
36 3300005617 Ga0068859_100000463 Ga0068859_10000046340 203
37 3300006931 Ga0097620_100000463 Ga0097620_10000046338 203
38 3300042876 Ga0451577_0059214 Ga0451577_0059214_415_1065 203
39 3300044673 Ga0453683_0016496 Ga0453683_0016496_2176_2814 203
40 3300044712 Ga0453684_0013409 Ga0453684_0013409_2204_2842 203
41 3300045051 Ga0451576_0005995 Ga0451576_0005995_2204_2842 203
42 3300046517 Ga0495630_0000146 Ga0495630_0000146_1808_2437 203
43 3300048917 Ga0496114_0617787 Ga0496114_0617787_202_813 203
44 iso_pu_bacteria 2599185163 2599371566 203
45 iso_pu_bacteria 2599185168 2599402609 203
46 iso_pu_bacteria 2599185185 2599484288 203
47 iso_pu_bacteria 2974289157 2974292404 203
48 3300005354 Ga0070675_100685733 Ga0070675_1006857332 204
49 3300031507 Ga0307509_10103299 Ga0307509_101032992 204
50 3300037312 Ga0395899_0001030 Ga0395899_0001030_24356_24973 204
51 3300037418 Ga0395900_0612343 Ga0395900_0612343_28_645 204
52 3300037471 Ga0395905_0225863 Ga0395905_0225863_385_1002 204
53 3300038443 Ga0395901_0044511 Ga0395901_0044511_2046_2663 204
54 3300042876 Ga0451577_0822611 Ga0451577_0822611_90_716 204
55 3300044712 Ga0453684_0021190 Ga0453684_0021190_6898_7512 204
56 3300044712 Ga0453684_0117261 Ga0453684_0117261_1685_2311 204
57 3300045051 Ga0451576_0062894 Ga0451576_0062894_1002_1616 204
58 3300046516 Ga0495628_0017806 Ga0495628_0017806_3202_3834 204
59 3300046678 Ga0495599_0012402 Ga0495599_0012402_1043_1675 204
60 3300048911 Ga0496108_0058301 Ga0496108_0058301_2284_2904 205
61 3300005844 Ga0068862_100215268 Ga0068862_1002152683 206
62 iso_pu_bacteria 2595698237 2596376679 206
63 iso_pu_bacteria 2643221582 2643918887 206
64 iso_pu_bacteria 2928125067 2928126942 206
65 iso_pu_bacteria 643348564 643601495 206
66 3300003791 Ga0055530_10015422 Ga0055530_100154223 207
67 3300005262 Ga0065165_1007640 Ga0065165_10076408 207
68 3300005329 Ga0070683_100056425 Ga0070683_1000564257 207
69 3300005330 Ga0070690_100000239 Ga0070690_10000023931 207
70 3300005331 Ga0070670_100003492 Ga0070670_10000349220 207
71 3300005530 Ga0070679_100151902 Ga0070679_1001519023 207
72 3300005548 Ga0070665_100045996 Ga0070665_1000459963 207
73 3300005563 Ga0068855_100831974 Ga0068855_1008319742 207
74 3300009551 Ga0105238_10003079 Ga0105238_100030797 207
75 3300009551 Ga0105238_10005868 Ga0105238_1000586817 207
76 3300010375 Ga0105239_10000831 Ga0105239_100008318 207
77 3300014326 Ga0157380_10002723 Ga0157380_1000272320 207
78 3300014497 Ga0182008_10000291 Ga0182008_1000029159 207
79 3300025298 Ga0209050_1000127 Ga0209050_1000127126 207
80 3300025298 Ga0209050_1003864 Ga0209050_100386419 207
81 3300025916 Ga0207663_10041453 Ga0207663_100414532 207
82 3300025924 Ga0207694_10022512 Ga0207694_1002251211 207
83 3300025925 Ga0207650_10666350 Ga0207650_106663501 207
84 3300025936 Ga0207670_10000552 Ga0207670_1000055214 207
85 3300025944 Ga0207661_10033777 Ga0207661_100337779 207
86 3300025949 Ga0207667_10713665 Ga0207667_107136652 207
87 3300028379 Ga0268266_10049050 Ga0268266_100490501 207
88 3300028800 Ga0265338_10076104 Ga0265338_100761045 207
89 3300029957 Ga0265324_10018820 Ga0265324_100188205 207
90 3300031548 Ga0307408_100107544 Ga0307408_1001075442 207
91 3300031731 Ga0307405_10147590 Ga0307405_101475901 207
92 3300031911 Ga0307412_10006856 Ga0307412_100068565 207
93 3300031995 Ga0307409_100455217 Ga0307409_1004552172 207
94 3300032002 Ga0307416_100000162 Ga0307416_1000001625 207
95 3300037418 Ga0395900_0000588 Ga0395900_0000588_2164_2790 207
96 3300037466 Ga0395898_0008014 Ga0395898_0008014_3969_4637 207
97 3300037471 Ga0395905_0244217 Ga0395905_0244217_852_1511 207
98 3300038443 Ga0395901_0001417 Ga0395901_0001417_10674_11342 207
99 3300042124 Ga0450922_015478 Ga0450922_015478_99_722 207
100 3300042125 Ga0450923_001091 Ga0450923_001091_2388_3011 207
101 3300044719 Ga0466971_0016127 Ga0466971_0016127_2524_3159 207
102 3300045836 Ga0466958_0011500 Ga0466958_0011500_1635_2312 207
103 3300045836 Ga0466958_0137688 Ga0466958_0137688_251_886 207
104 3300046507 Ga0495606_0033415 Ga0495606_0033415_1519_2148 207
105 3300046517 Ga0495630_0000375 Ga0495630_0000375_4507_5163 207
106 3300046660 Ga0495625_0002962 Ga0495625_0002962_12528_13157 207
107 3300046660 Ga0495625_0170448 Ga0495625_0170448_797_1432 207
108 3300047319 Ga0495674_0140035 Ga0495674_0140035_67_723 207
109 3300047444 Ga0495675_0000593 Ga0495675_0000593_16030_16668 207
110 3300048091 Ga0495626_0000905 Ga0495626_0000905_24976_25611 207
111 3300048916 Ga0496113_0029759 Ga0496113_0029759_3131_3793 207
112 3300048924 Ga0496121_0496206 Ga0496121_0496206_53_688 207
113 3300048925 Ga0496122_0072414 Ga0496122_0072414_504_1133 207
114 3300048927 Ga0496124_0000477 Ga0496124_0000477_47481_48110 207
115 3300049705 Ga0501225_0004804 Ga0501225_0004804_3209_3847 207
116 3300049823 Ga0501044_0000586 Ga0501044_0000586_13958_14593 207
117 3300053092 Ga0500583_0001720 Ga0500583_0001720_5406_6032 207
118 3300061719 Ga0466962_0045955 Ga0466962_0045955_624_1259 207
119 iso_pu_bacteria 2921208531 2921214188 207
120 iso_pu_bacteria 2970061556 2970066278 207
121 3300005290 Ga0065712_10073430 Ga0065712_1007343010 208
122 3300005328 Ga0070676_10353053 Ga0070676_103530532 208
123 3300005329 Ga0070683_100313353 Ga0070683_1003133533 208
124 3300005331 Ga0070670_100002477 Ga0070670_10000247717 208
125 3300005354 Ga0070675_100000905 Ga0070675_1000009052 208
126 3300005354 Ga0070675_100016473 Ga0070675_1000164731 208
127 3300005355 Ga0070671_100243822 Ga0070671_1002438223 208
128 3300005364 Ga0070673_100151881 Ga0070673_1001518814 208
129 3300005365 Ga0070688_100093857 Ga0070688_1000938572 208
130 3300005456 Ga0070678_100063261 Ga0070678_1000632611 208
131 3300005459 Ga0068867_100634529 Ga0068867_1006345292 208
132 3300005466 Ga0070685_10009753 Ga0070685_100097533 208
133 3300005543 Ga0070672_100060653 Ga0070672_1000606533 208
134 3300005544 Ga0070686_100031475 Ga0070686_1000314752 208
135 3300005548 Ga0070665_100551438 Ga0070665_1005514382 208
136 3300005618 Ga0068864_100161703 Ga0068864_1001617035 208
137 3300006237 Ga0097621_100785213 Ga0097621_1007852131 208
138 3300006358 Ga0068871_100105178 Ga0068871_1001051786 208
139 3300006358 Ga0068871_100829280 Ga0068871_1008292801 208
140 3300009094 Ga0111539_10932691 Ga0111539_109326912 208
141 3300009177 Ga0105248_10582520 Ga0105248_105825202 208
142 3300009177 Ga0105248_10882774 Ga0105248_108827742 208
143 3300009553 Ga0105249_10127007 Ga0105249_101270076 208
144 3300013296 Ga0157374_10496830 Ga0157374_104968301 208
145 3300013308 Ga0157375_10507053 Ga0157375_105070533 208
146 3300014325 Ga0163163_10489604 Ga0163163_104896042 208
147 3300021384 Ga0213876_10001300 Ga0213876_100013005 208
148 3300025315 Ga0207697_10060751 Ga0207697_100607513 208
149 3300025315 Ga0207697_10091882 Ga0207697_100918822 208
150 3300025315 Ga0207697_10118567 Ga0207697_101185672 208
151 3300025908 Ga0207643_10034463 Ga0207643_100344636 208
152 3300025925 Ga0207650_10001391 Ga0207650_1000139129 208
153 3300025925 Ga0207650_10003043 Ga0207650_100030436 208
154 3300025926 Ga0207659_10001013 Ga0207659_1000101311 208
155 3300025926 Ga0207659_10066229 Ga0207659_100662293 208
156 3300025926 Ga0207659_10197632 Ga0207659_101976324 208
157 3300025940 Ga0207691_10155606 Ga0207691_101556062 208
158 3300025940 Ga0207691_10200504 Ga0207691_102005043 208
159 3300025941 Ga0207711_10750533 Ga0207711_107505332 208
160 3300025944 Ga0207661_10556107 Ga0207661_105561072 208
161 3300025960 Ga0207651_10118837 Ga0207651_101188372 208
162 3300026095 Ga0207676_10011923 Ga0207676_1001192311 208
163 3300026095 Ga0207676_10113313 Ga0207676_101133137 208
164 3300026121 Ga0207683_10841147 Ga0207683_108411472 208
165 3300039437 Ga0436365_1178938 Ga0436365_1178938_890_1525 208
166 3300047319 Ga0495674_0032253 Ga0495674_0032253_1739_2383 208
167 3300050511 nmdc:mga08y16_754310_c1 nmdc:mga08y16_754310_c1_139_765 208
168 3300002244 JGI24742J22300_10007255 JGI24742J22300_100072555 212
169 3300005290 Ga0065712_10076120 Ga0065712_100761204 212
170 3300005330 Ga0070690_100365603 Ga0070690_1003656032 212
171 3300005335 Ga0070666_10162524 Ga0070666_101625243 212
172 3300005354 Ga0070675_100123453 Ga0070675_1001234535 212
173 3300005355 Ga0070671_100109643 Ga0070671_1001096431 212
174 3300005544 Ga0070686_100018697 Ga0070686_1000186978 212
175 3300006881 Ga0068865_100254316 Ga0068865_1002543162 212
176 3300009176 Ga0105242_10307999 Ga0105242_103079993 212
177 3300009177 Ga0105248_10176157 Ga0105248_101761572 212
178 3300013306 Ga0163162_10971111 Ga0163162_109711112 212
179 3300013306 Ga0163162_11045299 Ga0163162_110452992 212
180 3300013308 Ga0157375_11225703 Ga0157375_112257032 212
181 3300025934 Ga0207686_10001996 Ga0207686_1000199621 212
182 3300025941 Ga0207711_10122699 Ga0207711_101226992 212
183 3300025941 Ga0207711_11181363 Ga0207711_111813631 212

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09588

YqaJ

YqaJ-like viral recombinase domain

11

152

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3sz4-assembly1.cif.gz_A crystal structure of lhk-exo in complex with damp 0.9732 5 209
3syy-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9634 5 212
3syy-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9585 5 212
3sz4-assembly1.cif.gz_A crystal structure of lhk-exo in complex with damp 0.9585 5 209
3slp-assembly1.cif.gz_B crystal structure of lambda exonuclease in complex with a 12 bp symmetric dna duplex 0.9292 1 203
ID Description Score Start End Superfamily
3syyA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.9634 5 212 3.90.320.10
3syyA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.9585 5 212 3.90.320.10
1avqA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.9101 1 203 3.90.320.10
1avqA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.8615 1 203 3.90.320.10
af_Q8GW93_101_301_3.90.320.10 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.8281 1 195 3.90.320.10
ID Description Score Start End GO Terms
AF-A0A0A8K8N6-F1-model_v4 Phage exonuclease (EC 3.1.11.3) 0.9864 1 207 GO:0051908
AF-J1K5V1-F1-model_v4 deleted 0.986 1 164
AF-A0A1C4DMX1-F1-model_v4 YqaJ-like recombinase domain-containing protein 0.9855 1 105
AF-A0A1B9NMM8-F1-model_v4 Exonuclease 0.9841 1 205 GO:0004527
AF-A0A2N9Y949-F1-model_v4 Exonuclease 0.9825 1 119 GO:0004527

Feature Viewer

pLDDT pTM Quality
93.11 0.89 High
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Predicted Structure (AlphaFold2)

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