F280847

General Info

Members Datasets Scaffolds Average Seq Length
183 116 366 378

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10001266|Ga0157370_1000126630
Length 433
Sequence MKIIHITASYKPAYIYGGPIQSVGRLCEVLSDSKLSRVLREGILVCVKDDKPLTLDDKSSAQYGKCIEVEVITTTANGANELDVKIGEPVFVEGVQVSYFKRLTKDHSHFSPGLLWGLRKEILRYSKDNNNIKIPKLQAPNSKLIIHIHAWWNLVSVLSCLIAKWYRIPVTLSPRGMLTSYTLGNRNSISKKLIHKLLGKNLLQYCHVHATSEQEKADILKIVTPKSIRVVPNLVSLPLEKHDPKSPASISENQAEGYFKIIFLSRIEEKKGLEVLFNALATVDIPWKLTIAGSGEEQYLQDLKLLTNKLKLSDNIYWIGQVSNEDKYTLIAAHDLLVLTSYNENFANVVVESLSVGTPVLISEYVGLADYVKDNELGWVTNLEIAEIKNNIIFAYQNPEKRQNIRNTAPSTIREDFNDDVLANRYLEFYKTL

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
47 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
48 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
76 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
85 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
86 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
87 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
88 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
89 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
90 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
91 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
92 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
93 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
94 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
95 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
96 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
97 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
98 2738541283 Pedobacter sp. OK701 Isolate Unclassified
99 2738541284 Pedobacter sp. YR016 Isolate Unclassified
100 2738541302 Pedobacter sp. CF074 Isolate Unclassified
101 2738543023 Pedobacter sp. OK628 Isolate Unclassified
102 2739367651 Pedobacter sp. OK291 Isolate Unclassified
103 2739367656 Pedobacter sp. CF523 Isolate Unclassified
104 2739367663 Pedobacter sp. YR510 Isolate Unclassified
105 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
106 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
107 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
108 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
109 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
110 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
111 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
112 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
113 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
114 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
115 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
116 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.07
Metatranscriptomes 0
Isolates 10.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.29
Nodule 0
Rhizoplane 0
Rhizosphere 76.5
Stem 0
Stem Tuber 0
Unclassified 8.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10001266 3300013104 Bacteria 31553
2 JGI25162J39368_1001024 3300002737 Bacteria 17293
3 JGI25164J39214_1001274 3300002772 Bacteria 6499
4 JGI25165J46597_1000995 3300003214 Bacteria 18835
5 rootH1_10018616 3300003316 Bacteria 5902
6 rootH1_10020301 3300003316 Bacteria 7251
7 rootH2_10002321 3300003320 Bacteria 110257
8 rootH2_10063779 3300003320 Bacteria 20382
9 rootH2_10107823 3300003320 Bacteria 1982
10 rootH2_10266304 3300003320 Unclassified 3240
11 rootL2_10073720 3300003322 Bacteria 5506
12 rootL2_10139201 3300003322 Bacteria 5659
13 rootH1_10073596 3300003323 Bacteria 6101
14 rootH1_10170134 3300003323 Bacteria 15889
15 Ga0055536_1000024 3300003781 Bacteria 185534
16 Ga0055530_10001039 3300003791 Bacteria 22138
17 Ga0065714_10068335 3300005288 Bacteria 4787
18 Ga0065704_10134711 3300005289 Bacteria 1585
19 Ga0070658_10000301 3300005327 Bacteria 42860
20 Ga0070676_10000362 3300005328 Bacteria 20809
21 Ga0068868_100051585 3300005338 Unclassified 3237
22 Ga0070674_100138057 3300005356 Bacteria 1826
23 Ga0070678_100003311 3300005456 Bacteria 8958
24 Ga0068867_100001115 3300005459 Bacteria 18389
25 Ga0068853_100005336 3300005539 Bacteria 10062
26 Ga0070665_100000010 3300005548 Bacteria 529545
27 Ga0068855_100000098 3300005563 Bacteria 105977
28 Ga0068855_100002259 3300005563 Bacteria 23782
29 Ga0068855_100027365 3300005563 Bacteria 6821
30 Ga0068855_100046014 3300005563 Bacteria 5159
31 Ga0068857_100127641 3300005577 Unclassified 2292
32 Ga0068856_100000006 3300005614 Bacteria 223827
33 Ga0068856_100001243 3300005614 Bacteria 26769
34 Ga0068856_100055107 3300005614 Unclassified 3924
35 Ga0068856_100362817 3300005614 Bacteria 1467
36 Ga0068852_100002461 3300005616 Bacteria 12747
37 Ga0068852_100088741 3300005616 Bacteria 2762
38 Ga0075366_10000492 3300006195 Bacteria 18283
39 Ga0097621_100000011 3300006237 Bacteria 111116
40 Ga0075370_10123490 3300006353 Bacteria 1508
41 Ga0068871_100000323 3300006358 Bacteria 33311
42 Ga0068865_100000128 3300006881 Bacteria 39251
43 Ga0105240_10010258 3300009093 Bacteria 13188
44 Ga0105240_10011030 3300009093 Bacteria 12638
45 Ga0105240_10093289 3300009093 Bacteria 3675
46 Ga0105240_10472543 3300009093 Unclassified 1399
47 Ga0105241_10000504 3300009174 Bacteria 29406
48 Ga0105241_10027970 3300009174 Bacteria 4199
49 Ga0105241_10277156 3300009174 Unclassified 1431
50 Ga0105237_10000247 3300009545 Bacteria 76464
51 Ga0105237_10000456 3300009545 Bacteria 57925
52 Ga0105237_10003934 3300009545 Bacteria 17398
53 Ga0105239_10000015 3300010375 Bacteria 319892
54 Ga0105239_10006988 3300010375 Bacteria 13004
55 Ga0105239_10014678 3300010375 Bacteria 8687
56 Ga0157373_10006279 3300013100 Bacteria 8881
57 Ga0157373_10045398 3300013100 Bacteria 3136
58 Ga0157373_10053149 3300013100 Bacteria 2880
59 Ga0157371_10016318 3300013102 Bacteria 5547
60 Ga0157370_10000472 3300013104 Bacteria 50203
61 Ga0157370_10001399 3300013104 Bacteria 29911
62 Ga0157370_10002368 3300013104 Bacteria 22717
63 Ga0157370_10003245 3300013104 Bacteria 19171
64 Ga0157370_10005939 3300013104 Bacteria 13603
65 Ga0157370_10019299 3300013104 Bacteria 6843
66 Ga0157370_10037121 3300013104 Bacteria 4724
67 Ga0157370_10054847 3300013104 Bacteria 3799
68 Ga0157370_10113490 3300013104 Bacteria 2532
69 Ga0157369_10000007 3300013105 Bacteria 402562
70 Ga0157369_10000555 3300013105 Bacteria 49015
71 Ga0157369_10073355 3300013105 Unclassified 3672
72 Ga0157374_10000643 3300013296 Bacteria 30783
73 Ga0157374_10007568 3300013296 Bacteria 9270
74 Ga0157374_10032703 3300013296 Bacteria 4738
75 Ga0163162_10000099 3300013306 Bacteria 78696
76 Ga0163162_10007703 3300013306 Bacteria 10491
77 Ga0163162_10045575 3300013306 Bacteria 4393
78 Ga0163162_10046629 3300013306 Unclassified 4344
79 Ga0157375_10008900 3300013308 Bacteria 8787
80 Ga0157375_10107774 3300013308 Bacteria 2880
81 Ga0157375_10345395 3300013308 Bacteria 1654
82 Ga0182008_10000006 3300014497 Bacteria 378521
83 Ga0182008_10001185 3300014497 Bacteria 17968
84 Ga0157376_10104712 3300014969 Unclassified 2480
85 Ga0182006_1000945 3300015261 Bacteria 19365
86 Ga0182006_1001061 3300015261 Bacteria 17700
87 Ga0182006_1025903 3300015261 Bacteria 2406
88 Ga0182007_10000065 3300015262 Bacteria 85433
89 Ga0183373_1001 3300015682 Bacteria 1410374
90 Ga0163161_10000147 3300017792 Bacteria 64299
91 Ga0163161_10000287 3300017792 Bacteria 44102
92 Ga0163161_10000337 3300017792 Bacteria 39961
93 Ga0163161_10000864 3300017792 Bacteria 23630
94 Ga0207427_100113 3300025231 Bacteria 107320
95 Ga0209437_100010 3300025233 Bacteria 838447
96 Ga0209233_1000017 3300025261 Bacteria 898076
97 Ga0209455_1005174 3300025272 Unclassified 4092
98 Ga0209676_1000008 3300025292 Bacteria 991778
99 Ga0209050_1000055 3300025298 Bacteria 339254
100 Ga0207647_10000641 3300025904 Bacteria 27308
101 Ga0207645_10001718 3300025907 Bacteria 17779
102 Ga0207705_10000336 3300025909 Bacteria 42484
103 Ga0207654_10081599 3300025911 Bacteria 1948
104 Ga0207695_10006565 3300025913 Bacteria 15056
105 Ga0207695_10042590 3300025913 Bacteria 4846
106 Ga0207695_10146852 3300025913 Unclassified 2301
107 Ga0207671_10000441 3300025914 Bacteria 57099
108 Ga0207671_10009061 3300025914 Bacteria 8366
109 Ga0207671_10024206 3300025914 Bacteria 4569
110 Ga0207686_10015535 3300025934 Unclassified 4258
111 Ga0207669_10143949 3300025937 Bacteria 1659
112 Ga0207704_10000019 3300025938 Bacteria 152734
113 Ga0207667_10000014 3300025949 Bacteria 421261
114 Ga0207667_10001944 3300025949 Bacteria 25894
115 Ga0207667_10012520 3300025949 Bacteria 9764
116 Ga0207677_10040541 3300026023 Unclassified 3071
117 Ga0207702_10000023 3300026078 Bacteria 189234
118 Ga0207702_10016172 3300026078 Bacteria 6178
119 Ga0207702_10069685 3300026078 Unclassified 3024
120 Ga0207648_10000061 3300026089 Bacteria 101034
121 Ga0207683_10004385 3300026121 Bacteria 12193
122 Ga0207698_10039449 3300026142 Unclassified 3499
123 Ga0268266_10000032 3300028379 Bacteria 395079
124 Ga0307515_10000643 3300028794 Bacteria 80674
125 Ga0307515_10004205 3300028794 Bacteria 29953
126 Ga0307515_10056309 3300028794 Bacteria 5718
127 Ga0265338_10012833 3300028800 Bacteria 9523
128 Ga0307408_100002090 3300031548 Bacteria 14384
129 Ga0307405_10000003 3300031731 Bacteria 569064
130 Ga0307407_10000020 3300031903 Bacteria 126218
131 Ga0307416_100000042 3300032002 Bacteria 130512
132 Ga0307414_10053442 3300032004 Bacteria 2817
133 Ga0307414_10081640 3300032004 Bacteria 2368
134 Ga0307507_10000502 3300033179 Bacteria 82354
135 Ga0373941_0001850 3300035115 Bacteria 4566
136 Ga0395900_0000541 3300037418 Bacteria 52877
137 Ga0395900_0004918 3300037418 Bacteria 14068
138 Ga0395900_0047362 3300037418 Bacteria 4426
139 Ga0395900_0085855 3300037418 Bacteria 3234
140 Ga0395898_0312450 3300037466 Bacteria 1499
141 Ga0395905_0000462 3300037471 Bacteria 56533
142 Ga0395905_0000977 3300037471 Bacteria 36694
143 Ga0395905_0060009 3300037471 Bacteria 3556
144 Ga0395901_0285392 3300038443 Bacteria 1714
145 Ga0436361_0589614 3300039447 Bacteria 2383
146 Ga0495585_0032253 3300046492 Bacteria 2968
147 Ga0495610_0000051 3300046512 Bacteria 143715
148 Ga0495610_0000314 3300046512 Bacteria 51348
149 Ga0495610_0027753 3300046512 Bacteria 3003
150 Ga0495644_0005328 3300046523 Bacteria 5022
151 Ga0495642_0076420 3300046528 Bacteria 1406
152 Ga0495633_0000026 3300046558 Bacteria 204722
153 Ga0495668_0000122 3300046616 Bacteria 115217
154 Ga0495625_0001221 3300046660 Bacteria 32622
155 Ga0495687_009601 3300047443 Bacteria 5389
156 Ga0495686_0000071 3300047472 Bacteria 216594
157 Ga0495686_0175735 3300047472 Bacteria 1243
158 Ga0496122_0002455 3300048925 Bacteria 26237
159 Ga0496123_0004452 3300048926 Bacteria 14719
160 nmdc:mga0k408_22_c2 3300050493 Bacteria 93033
161 Ga0500651_0000256 3300053093 Bacteria 32006
162 Ga0500608_011369 3300053122 Bacteria 3862
163 Ga0500618_000010 3300053125 Bacteria 203909
164 2586207882 2585427687 Bacteria 5544917
165 2738756945 2738541283 Bacteria 7222293
166 2738760240 2738541284 Bacteria 5199923
167 2738852172 2738541302 Bacteria 5944758
168 2739302106 2738543023 Bacteria 6767879
169 2739589628 2739367651 Bacteria 6359826
170 2739616425 2739367656 Bacteria 5152243
171 2739647076 2739367663 Bacteria 5040914
172 2842725416 2842722452 Bacteria 6263924
173 2842912694 2842909656 Bacteria 6185908
174 2849281948 2849281842 Bacteria 6065644
175 2852624562 2852623160 Bacteria 4376875
176 2857629560 2857627736 Bacteria 5625397
177 2884936552 2884933994 Bacteria 4535041
178 2902052259 2902048731 Bacteria 4976191
179 2904446840 2904445276 Bacteria 5310396
180 2911143752 2911138879 Bacteria 5811561
181 2919438073 2919437846 Bacteria 6199444
182 2946002338 2945997725 Bacteria 6404843
183 2954019231 2954016120 Bacteria 6446024
184 Ga0157370_10001266
185 JGI25162J39368_1001024
186 JGI25164J39214_1001274
187 JGI25165J46597_1000995
188 rootH1_10018616
189 rootH1_10020301
190 rootH2_10002321
191 rootH2_10063779
192 rootH2_10107823
193 rootH2_10266304
194 rootL2_10073720
195 rootL2_10139201
196 rootH1_10073596
197 rootH1_10170134
198 Ga0055536_1000024
199 Ga0055530_10001039
200 Ga0065714_10068335
201 Ga0065704_10134711
202 Ga0070658_10000301
203 Ga0070676_10000362
204 Ga0068868_100051585
205 Ga0070674_100138057
206 Ga0070678_100003311
207 Ga0068867_100001115
208 Ga0068853_100005336
209 Ga0070665_100000010
210 Ga0068855_100000098
211 Ga0068855_100002259
212 Ga0068855_100027365
213 Ga0068855_100046014
214 Ga0068857_100127641
215 Ga0068856_100000006
216 Ga0068856_100001243
217 Ga0068856_100055107
218 Ga0068856_100362817
219 Ga0068852_100002461
220 Ga0068852_100088741
221 Ga0075366_10000492
222 Ga0097621_100000011
223 Ga0075370_10123490
224 Ga0068871_100000323
225 Ga0068865_100000128
226 Ga0105240_10010258
227 Ga0105240_10011030
228 Ga0105240_10093289
229 Ga0105240_10472543
230 Ga0105241_10000504
231 Ga0105241_10027970
232 Ga0105241_10277156
233 Ga0105237_10000247
234 Ga0105237_10000456
235 Ga0105237_10003934
236 Ga0105239_10000015
237 Ga0105239_10006988
238 Ga0105239_10014678
239 Ga0157373_10006279
240 Ga0157373_10045398
241 Ga0157373_10053149
242 Ga0157371_10016318
243 Ga0157370_10000472
244 Ga0157370_10001399
245 Ga0157370_10002368
246 Ga0157370_10003245
247 Ga0157370_10005939
248 Ga0157370_10019299
249 Ga0157370_10037121
250 Ga0157370_10054847
251 Ga0157370_10113490
252 Ga0157369_10000007
253 Ga0157369_10000555
254 Ga0157369_10073355
255 Ga0157374_10000643
256 Ga0157374_10007568
257 Ga0157374_10032703
258 Ga0163162_10000099
259 Ga0163162_10007703
260 Ga0163162_10045575
261 Ga0163162_10046629
262 Ga0157375_10008900
263 Ga0157375_10107774
264 Ga0157375_10345395
265 Ga0182008_10000006
266 Ga0182008_10001185
267 Ga0157376_10104712
268 Ga0182006_1000945
269 Ga0182006_1001061
270 Ga0182006_1025903
271 Ga0182007_10000065
272 Ga0183373_1001
273 Ga0163161_10000147
274 Ga0163161_10000287
275 Ga0163161_10000337
276 Ga0163161_10000864
277 Ga0207427_100113
278 Ga0209437_100010
279 Ga0209233_1000017
280 Ga0209455_1005174
281 Ga0209676_1000008
282 Ga0209050_1000055
283 Ga0207647_10000641
284 Ga0207645_10001718
285 Ga0207705_10000336
286 Ga0207654_10081599
287 Ga0207695_10006565
288 Ga0207695_10042590
289 Ga0207695_10146852
290 Ga0207671_10000441
291 Ga0207671_10009061
292 Ga0207671_10024206
293 Ga0207686_10015535
294 Ga0207669_10143949
295 Ga0207704_10000019
296 Ga0207667_10000014
297 Ga0207667_10001944
298 Ga0207667_10012520
299 Ga0207677_10040541
300 Ga0207702_10000023
301 Ga0207702_10016172
302 Ga0207702_10069685
303 Ga0207648_10000061
304 Ga0207683_10004385
305 Ga0207698_10039449
306 Ga0268266_10000032
307 Ga0307515_10000643
308 Ga0307515_10004205
309 Ga0307515_10056309
310 Ga0265338_10012833
311 Ga0307408_100002090
312 Ga0307405_10000003
313 Ga0307407_10000020
314 Ga0307416_100000042
315 Ga0307414_10053442
316 Ga0307414_10081640
317 Ga0307507_10000502
318 Ga0373941_0001850
319 Ga0395900_0000541
320 Ga0395900_0004918
321 Ga0395900_0047362
322 Ga0395900_0085855
323 Ga0395898_0312450
324 Ga0395905_0000462
325 Ga0395905_0000977
326 Ga0395905_0060009
327 Ga0395901_0285392
328 Ga0436361_0589614
329 Ga0495585_0032253
330 Ga0495610_0000051
331 Ga0495610_0000314
332 Ga0495610_0027753
333 Ga0495644_0005328
334 Ga0495642_0076420
335 Ga0495633_0000026
336 Ga0495668_0000122
337 Ga0495625_0001221
338 Ga0495687_009601
339 Ga0495686_0000071
340 Ga0495686_0175735
341 Ga0496122_0002455
342 Ga0496123_0004452
343 nmdc:mga0k408_22_c2
344 Ga0500651_0000256
345 Ga0500608_011369
346 Ga0500618_000010
347 2586207882
348 2738756945
349 2738760240
350 2738852172
351 2739302106
352 2739589628
353 2739616425
354 2739647076
355 2842725416
356 2842912694
357 2849281948
358 2852624562
359 2857629560
360 2884936552
361 2902052259
362 2904446840
363 2911143752
364 2919438073
365 2946002338
366 2954019231

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

246

412

0.95

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

60

238

0.88

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

258

398

0.88

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

212

415

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5i45-assembly1.cif.gz_A 1.35 angstrom crystal structure of c-terminal domain of glycosyl transferase group 1 family protein (lpcc) from francisella tularensis. 0.8601 202 359
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8596 202 355
3qhp-assembly2.cif.gz_B crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8466 202 355
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.825 202 355
3qhp-assembly2.cif.gz_B crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.821 202 355
ID Description Score Start End Superfamily
af_P9WMZ3_200_365_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9088 205 358 3.40.50.2000
af_Q59002_191_368_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9071 200 355 3.40.50.2000
af_Q9VZU8_216_412_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.905 200 375 3.40.50.2000
af_P9WMY9_212_374_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9033 196 355 3.40.50.2000
5d00A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8892 200 359 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A2E6J8Y5-F1-model_v4 Glycosyltransferase 0.9269 1 378 GO:0016758
AF-A0A2E6J8Y5-F1-model_v4 Glycosyltransferase 0.9222 1 378 GO:0016758
AF-I4BZN3-F1-model_v4 Glycosyltransferase 0.9168 1 376 GO:0016757
AF-A0A7C5BRK7-F1-model_v4 Glycosyltransferase 0.9118 146 377 GO:0016757
AF-A0A2V6R030-F1-model_v4 Glycosyl transferase 0.9095 1 168 GO:0016757

Map