F280925

General Info

Members Datasets Scaffolds Average Seq Length
183 158 362 466

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10011886|Ga0213876_100118862
Length 512
Sequence VVCDVTETVQAEPGVNGQQPQNGERPQLTLATEAARNLATTTKSQPQMQAITSRWLLRVLPWVEAVGGTFRVNRRASFTLGDGRIQFRMNGDENIKPIPEELCELPMLRQLNYVEHRDMLVELADAFQLRNIERGSTVVQQGQPADRLFLIAHGKANKIGPGKYGDPTVLGTLHDGDYFGDRELVTESDNWTYTVRAVTPLKVLELPEQAFRQLVDRSEPLRNSYEKFRDIVANAAEAADEHGEKRIQLSADHPQEHLLDGTYVDYQLSPREYQLSVAQTVLRVHTRVADLYNNPMNQFEEQLRLTIEALREKQENELMNNTDFGLLHNAEPQQRVSTRSGPPTPDDLDELIATVWKEPDVMLAHPRAIAAFGRECNNRGIYPMSIDLGGQKVPAWRGIPMLPCNKIPIDKYQTSSIVLMRTGLEKQGVIGLHQTGLPDEVQPGLNVRFMHIDDKAIMHYLVSAYYSAAVMVPDALGILENVEVGVYHDDDSLSPNGQTPQSSESRSSRKSK

Samples

Sample ID Description Type Environment
1 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
13 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
15 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
16 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
17 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
18 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
19 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
20 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
21 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
22 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
26 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
28 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
43 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
44 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
47 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
48 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
49 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
50 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
51 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
52 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
53 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
54 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
55 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
56 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
57 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
58 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
65 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
66 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
72 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
78 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
81 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
82 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
83 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
84 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
85 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
86 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
87 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
90 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
91 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
95 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
96 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
97 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
98 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
100 2506783011 Frankia datiscae Dg1 Isolate Nodule
101 2527291627 Frankia casuarinae Thr Isolate Nodule
102 2527291629 Frankia sp. BMG5.23 Isolate Nodule
103 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
104 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
105 2576861822 Frankia sp. CeD Isolate Nodule
106 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
107 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
108 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
109 2619618881 Frankia sp. ACN1ag Isolate Unclassified
110 2619619003 Frankia sp. CpI1-P Isolate Nodule
111 2626541554 Frankia sp. AvcI.1 Isolate Nodule
112 2643221692 Nocardia sp. Root136 Isolate Unclassified
113 2671180195 Frankia sp. CcI49 Isolate Nodule
114 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
115 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
116 2684623036 Frankia sp. CgIM4 Isolate Nodule
117 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
118 2710264753 Frankia sp. KB5 Isolate Nodule
119 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
120 2773857922 Frankia sp. CcI49 Isolate Nodule
121 2773857924 Frankia sp. CgIS1 Isolate Nodule
122 2773857933 Frankia sp. BMG5.30 Isolate Nodule
123 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
124 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
125 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
126 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
127 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
128 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
129 2867369537 Streptomyces sp. Z26 Isolate Unclassified
130 2867475112 Streptomyces sp. TM32 Isolate Unclassified
131 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
132 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
133 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
134 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
135 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
136 2891562705 Microbispora tritici MT50 Isolate Unclassified
137 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
138 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
139 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
140 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
141 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
142 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
143 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
144 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
145 637000116 Frankia casuarinae CcI3 Isolate Nodule
146 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified
147 8002775197 Frankia nepalensis CN7 Isolate Nodule
148 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
149 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
150 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
151 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
152 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
153 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
154 8054920844 Frankia tisae Agncl-8 Isolate Nodule
155 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule
156 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
157 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
158 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.03
Metatranscriptomes 2.73
Isolates 32.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.73
Nodule 10.93
Rhizoplane 1.64
Rhizosphere 61.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213876_10011886 3300021384 Bacteria 4641
2 rootH2_10147786 3300003320 Bacteria 2290
3 Ga0070658_10154356 3300005327 Bacteria 1924
4 Ga0070714_100013864 3300005435 Bacteria 6464
5 Ga0070714_100099469 3300005435 Bacteria 2560
6 Ga0070713_100056706 3300005436 Bacteria 3259
7 Ga0068853_100139865 3300005539 Bacteria 2173
8 Ga0070665_100028149 3300005548 Bacteria 5659
9 Ga0068855_100007437 3300005563 Bacteria 13263
10 Ga0068856_100123032 3300005614 Bacteria 2597
11 Ga0068859_100064392 3300005617 Bacteria 3698
12 Ga0068858_100000152 3300005842 Bacteria 72991
13 Ga0070717_10004985 3300006028 Bacteria 9658
14 Ga0070717_10035017 3300006028 Bacteria 4061
15 Ga0070717_10116953 3300006028 Bacteria 2280
16 Ga0097620_100064391 3300006931 Bacteria 3698
17 Ga0105240_10041060 3300009093 Bacteria 5909
18 Ga0105247_10000262 3300009101 Bacteria 48787
19 Ga0105247_10003289 3300009101 Bacteria 10588
20 Ga0105241_10001210 3300009174 Bacteria 19717
21 Ga0105248_10009655 3300009177 Bacteria 10628
22 Ga0105237_10043135 3300009545 Bacteria 4546
23 Ga0157374_10103806 3300013296 Bacteria 2728
24 Ga0157379_10000543 3300014968 Bacteria 30457
25 Ga0157379_10018415 3300014968 Bacteria 6158
26 Ga0197907_10768831 3300020069 Bacteria 3607
27 Ga0206356_11061856 3300020070 Bacteria 1842
28 Ga0206352_10861308 3300020078 Bacteria 2537
29 Ga0206350_10076506 3300020080 Bacteria 3060
30 Ga0213875_10000333 3300021388 Bacteria 44800
31 Ga0224712_10011971 3300022467 Bacteria 2711
32 Ga0207426_1000533 3300025302 Bacteria 54735
33 Ga0207426_1001103 3300025302 Bacteria 24859
34 Ga0207710_10000040 3300025900 Bacteria 229443
35 Ga0207710_10000168 3300025900 Bacteria 69338
36 Ga0207647_10034052 3300025904 Bacteria 3255
37 Ga0207695_10038806 3300025913 Bacteria 5122
38 Ga0207671_10000488 3300025914 Bacteria 53807
39 Ga0207694_10012003 3300025924 Bacteria 6532
40 Ga0207700_10080534 3300025928 Bacteria 2540
41 Ga0207664_10029776 3300025929 Bacteria 4162
42 Ga0207711_10013139 3300025941 Bacteria 6876
43 Ga0207667_10129937 3300025949 Bacteria 2594
44 Ga0207668_10052021 3300025972 Bacteria 2833
45 Ga0207640_10097793 3300025981 Bacteria 2050
46 Ga0207703_10000181 3300026035 Bacteria 73537
47 Ga0207708_10182703 3300026075 Bacteria 1666
48 Ga0207702_10094553 3300026078 Bacteria 2624
49 Ga0307517_10003847 3300028786 Bacteria 23277
50 Ga0316177_1045912 3300030731 Bacteria 1536
51 Ga0307513_10000001 3300031456 Bacteria 1660464
52 Ga0307508_10003791 3300031616 Bacteria 15104
53 Ga0307508_10196722 3300031616 Bacteria 1617
54 Ga0307518_10001182 3300031838 Bacteria 19605
55 Ga0307507_10017533 3300033179 Bacteria 8216
56 Ga0307510_10016526 3300033180 Bacteria 8709
57 Ga0373956_0000750 3300035119 Bacteria 13404
58 Ga0436364_0769832 3300037853 Bacteria 3350
59 Ga0436364_0971903 3300037853 Bacteria 128436
60 Ga0436365_0553183 3300039437 Bacteria 6008
61 Ga0436360_0405004 3300039438 Bacteria 3515
62 Ga0439436_0002400 3300041404 Bacteria 5617
63 Ga0439439_0008253 3300041406 Bacteria 2454
64 Ga0439449_0008095 3300042007 Bacteria 3993
65 Ga0439457_003453 3300042014 Bacteria 4299
66 Ga0450907_010894 3300042146 Bacteria 1510
67 Ga0466969_0002084 3300044656 Bacteria 10678
68 Ga0466969_0007631 3300044656 Bacteria 5749
69 Ga0466972_0011752 3300044658 Bacteria 4396
70 Ga0466972_0017842 3300044658 Bacteria 3551
71 Ga0466965_0001746 3300044683 Bacteria 8969
72 Ga0466965_0027229 3300044683 Bacteria 2773
73 Ga0466965_0034112 3300044683 Bacteria 2489
74 Ga0466966_0115861 3300044684 Bacteria 1649
75 Ga0466961_0015554 3300044693 Bacteria 4883
76 Ga0466963_0001129 3300044694 Bacteria 13930
77 Ga0466971_0000501 3300044719 Bacteria 15356
78 Ga0466968_0000276 3300044735 Bacteria 16350
79 Ga0466968_0010940 3300044735 Bacteria 3526
80 Ga0466970_0028535 3300044765 Bacteria 2933
81 Ga0466960_0007546 3300044901 Bacteria 4424
82 Ga0466960_0051686 3300044901 Bacteria 1986
83 Ga0466959_0001990 3300045049 Bacteria 12880
84 Ga0466958_0000046 3300045836 Bacteria 36245
85 Ga0466958_0071086 3300045836 Bacteria 2130
86 Ga0466958_0216942 3300045836 Bacteria 1220
87 Ga0466967_0018692 3300045976 Bacteria 5548
88 Ga0466967_0072715 3300045976 Bacteria 3083
89 Ga0495627_038720 3300046453 Bacteria 1473
90 Ga0495592_0114543 3300046454 Bacteria 1904
91 Ga0495651_0001487 3300046462 Bacteria 18134
92 Ga0495651_0008991 3300046462 Bacteria 7668
93 Ga0495651_0112274 3300046462 Bacteria 2014
94 Ga0495662_0079890 3300046476 Bacteria 1590
95 Ga0495618_0013694 3300046514 Bacteria 4935
96 Ga0495628_0087272 3300046516 Bacteria 2419
97 Ga0495643_0002247 3300046522 Bacteria 15681
98 Ga0495652_0001715 3300046529 Bacteria 23615
99 Ga0495645_0039186 3300046543 Bacteria 3457
100 Ga0495635_0019194 3300046663 Bacteria 4770
101 Ga0495588_0099075 3300046674 Bacteria 1531
102 Ga0495613_0120059 3300046689 Bacteria 1888
103 Ga0495600_0026930 3300046809 Bacteria 3714
104 Ga0495600_0037144 3300046809 Bacteria 3166
105 Ga0495636_0068237 3300047318 Bacteria 1514
106 Ga0495685_002529 3300047447 Bacteria 5741
107 Ga0495615_0007338 3300048090 Bacteria 2088
108 Ga0496108_0000013 3300048911 Bacteria 249814
109 Ga0496117_0077999 3300048920 Bacteria 2189
110 Ga0496119_0004271 3300048922 Bacteria 14317
111 Ga0496119_0100314 3300048922 Bacteria 1626
112 Ga0496120_0001706 3300048923 Bacteria 25132
113 Ga0496121_0003574 3300048924 Bacteria 21974
114 Ga0501037_0062430 3300049573 Bacteria 2716
115 Ga0501047_0000056 3300049581 Bacteria 143501
116 Ga0495601_0005837 3300053077 Bacteria 7181
117 Ga0495612_0074745 3300053078 Bacteria 1417
118 Ga0500553_019019 3300053101 Bacteria 3480
119 Ga0500658_0046390 3300053134 Bacteria 1759
120 Ga0500573_0054229 3300053140 Bacteria 2302
121 Ga0466962_0000303 3300061719 Bacteria 21120
122 Ga0466962_0002021 3300061719 Bacteria 9575
123 2506868058 2506783011 Bacteria 5323186
124 2528205915 2527291627 Bacteria 5309833
125 2528215070 2527291629 Bacteria 5267418
126 2546948724 2546825537 Bacteria 5389291
127 2558912164 2558860112 Bacteria 9931328
128 2579750248 2576861822 Bacteria 5004595
129 2579858025 2579778521 Bacteria 7624758
130 2586061039 2585427649 Bacteria 9053857
131 2617912759 2617270889 Bacteria 9064343
132 2619854879 2619618881 Bacteria 7521104
133 2620353753 2619619003 Bacteria 7619552
134 2626639988 2626541554 Bacteria 7741902
135 2644516447 2643221692 Bacteria 7282860
136 2671836287 2671180195 Bacteria 9757215
137 2676199236 2675902999 Bacteria 9438463
138 2686535653 2684623035 Bacteria 8032739
139 2686540629 2684623036 Bacteria 5199090
140 2689994554 2687453743 Bacteria 8361025
141 2710604869 2710264753 Bacteria 5455564
142 2774843814 2773857921 Bacteria 9435764
143 2774854443 2773857922 Bacteria 9757215
144 2774867672 2773857924 Bacteria 5256821
145 2774905653 2773857933 Bacteria 5818019
146 2776372256 2775506925 Bacteria 7237746
147 2809589925 2808606522 Bacteria 9488490
148 2862389152 2862382967 Bacteria 10317375
149 2863075252 2863067949 Bacteria 8541735
150 2866554990 2866552031 Bacteria 5824618
151 2867346761 2867346516 Bacteria 7608576
152 2867375183 2867369537 Bacteria 6501581
153 2867477573 2867475112 Bacteria 6909112
154 2870787037 2870782633 Bacteria 9624083
155 2886630475 2886627955 Bacteria 7618130
156 2891330043 2891326441 Bacteria 6439512
157 2891396538 2891395885 Bacteria 9251614
158 2891555808 2891554331 Bacteria 8812224
159 2891567885 2891562705 Bacteria 8039471
160 2895431972 2895427314 Bacteria 13147766
161 2895885409 2895880812 Bacteria 11255272
162 2912763308 2912757875 Bacteria 7940295
163 2913852027 2913844669 Bacteria 8381711
164 2913943560 2913939268 Bacteria 8559644
165 2915769168 2915768154 Bacteria 8424322
166 2997452018 2997451912 Bacteria 8492419
167 2997602538 2997600082 Bacteria 9896405
168 637881556 637000116 Bacteria 5433628
169 642601851 642555144 Bacteria 9059191
170 8002775871 8002775197 Bacteria 10728764
171 8047710877 8047710418 Bacteria 11023148
172 8048135381 8048127548 Bacteria 11053136
173 8048364857 8048356638 Bacteria 11044339
174 8048370859 8048369669 Bacteria 11666822
175 8048388563 8048379754 Bacteria 11877923
176 8054163251 8054160619 Bacteria 7783213
177 8054921939 8054920844 Bacteria 7068637
178 8055159358 8055157932 Bacteria 6429399
179 8056058750 8056054917 Bacteria 5736694
180 8056210281 8056207758 Bacteria 8639239
181 8056836750 8056829672 Bacteria 9045328
182 Ga0213876_10011886
183 rootH2_10147786
184 Ga0070658_10154356
185 Ga0070714_100013864
186 Ga0070714_100099469
187 Ga0070713_100056706
188 Ga0068853_100139865
189 Ga0070665_100028149
190 Ga0068855_100007437
191 Ga0068856_100123032
192 Ga0068859_100064392
193 Ga0068858_100000152
194 Ga0070717_10004985
195 Ga0070717_10035017
196 Ga0070717_10116953
197 Ga0097620_100064391
198 Ga0105240_10041060
199 Ga0105247_10000262
200 Ga0105247_10003289
201 Ga0105241_10001210
202 Ga0105248_10009655
203 Ga0105237_10043135
204 Ga0157374_10103806
205 Ga0157379_10000543
206 Ga0157379_10018415
207 Ga0197907_10768831
208 Ga0206356_11061856
209 Ga0206352_10861308
210 Ga0206350_10076506
211 Ga0213875_10000333
212 Ga0224712_10011971
213 Ga0207426_1000533
214 Ga0207426_1001103
215 Ga0207710_10000040
216 Ga0207710_10000168
217 Ga0207647_10034052
218 Ga0207695_10038806
219 Ga0207671_10000488
220 Ga0207694_10012003
221 Ga0207700_10080534
222 Ga0207664_10029776
223 Ga0207711_10013139
224 Ga0207667_10129937
225 Ga0207668_10052021
226 Ga0207640_10097793
227 Ga0207703_10000181
228 Ga0207708_10182703
229 Ga0207702_10094553
230 Ga0307517_10003847
231 Ga0316177_1045912
232 Ga0307513_10000001
233 Ga0307508_10003791
234 Ga0307508_10196722
235 Ga0307518_10001182
236 Ga0307507_10017533
237 Ga0307510_10016526
238 Ga0373956_0000750
239 Ga0436364_0769832
240 Ga0436364_0971903
241 Ga0436365_0553183
242 Ga0436360_0405004
243 Ga0439436_0002400
244 Ga0439439_0008253
245 Ga0439449_0008095
246 Ga0439457_003453
247 Ga0450907_010894
248 Ga0466969_0002084
249 Ga0466969_0007631
250 Ga0466972_0011752
251 Ga0466972_0017842
252 Ga0466965_0001746
253 Ga0466965_0027229
254 Ga0466965_0034112
255 Ga0466966_0115861
256 Ga0466961_0015554
257 Ga0466963_0001129
258 Ga0466971_0000501
259 Ga0466968_0000276
260 Ga0466968_0010940
261 Ga0466970_0028535
262 Ga0466960_0007546
263 Ga0466960_0051686
264 Ga0466959_0001990
265 Ga0466958_0000046
266 Ga0466958_0071086
267 Ga0466958_0216942
268 Ga0466967_0018692
269 Ga0466967_0072715
270 Ga0495627_038720
271 Ga0495592_0114543
272 Ga0495651_0001487
273 Ga0495651_0008991
274 Ga0495651_0112274
275 Ga0495662_0079890
276 Ga0495618_0013694
277 Ga0495628_0087272
278 Ga0495643_0002247
279 Ga0495652_0001715
280 Ga0495645_0039186
281 Ga0495635_0019194
282 Ga0495588_0099075
283 Ga0495613_0120059
284 Ga0495600_0026930
285 Ga0495600_0037144
286 Ga0495636_0068237
287 Ga0495685_002529
288 Ga0495615_0007338
289 Ga0496108_0000013
290 Ga0496117_0077999
291 Ga0496119_0004271
292 Ga0496119_0100314
293 Ga0496120_0001706
294 Ga0496121_0003574
295 Ga0501037_0062430
296 Ga0501047_0000056
297 Ga0495601_0005837
298 Ga0495612_0074745
299 Ga0500553_019019
300 Ga0500658_0046390
301 Ga0500573_0054229
302 Ga0466962_0000303
303 Ga0466962_0002021
304 2506868058
305 2528205915
306 2528215070
307 2546948724
308 2558912164
309 2579750248
310 2579858025
311 2586061039
312 2617912759
313 2619854879
314 2620353753
315 2626639988
316 2644516447
317 2671836287
318 2676199236
319 2686535653
320 2686540629
321 2689994554
322 2710604869
323 2774843814
324 2774854443
325 2774867672
326 2774905653
327 2776372256
328 2809589925
329 2862389152
330 2863075252
331 2866554990
332 2867346761
333 2867375183
334 2867477573
335 2870787037
336 2886630475
337 2891330043
338 2891396538
339 2891555808
340 2891567885
341 2895431972
342 2895885409
343 2912763308
344 2913852027
345 2913943560
346 2915769168
347 2997452018
348 2997602538
349 637881556
350 642601851
351 8002775871
352 8047710877
353 8048135381
354 8048364857
355 8048370859
356 8048388563
357 8054163251
358 8054921939
359 8055159358
360 8056058750
361 8056210281
362 8056836750

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19307

SrpI-like

Type 2A encapsulin shell protein SrpI-like

232

486

0.99

PF00027

cNMP_binding

Cyclic nucleotide-binding domain

129

218

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3plq-assembly1.cif.gz_A crystal structure of pka type i regulatory subunit bound with rp-8-br-camps 0.9098 96 207
6x8m-assembly1.cif.gz_A cryoem structure of the holo-srpi encapsulin complex from synechococcus elongatus pcc 7942 0.9044 29 473
6cjt-assembly1.cif.gz_A structure of the sthk cyclic nucleotide-gated potassium channel in complex with cgmp 0.8891 99 216
5c8w-assembly6.cif.gz_F pkg ii's amino terminal cyclic nucleotide binding domain (cnb-a) in a complex with cgmp 0.8887 93 208
5jr7-assembly2.cif.gz_D crystal structure of an acrdys heterodimer [ria(92-365):c] of pka 0.8853 93 209
ID Description Score Start End Superfamily
4wbbA02 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9319 99 206 2.60.120.10
af_Q8I719_160_276_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9292 105 206 2.60.120.10
af_O76360_174_305_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9157 102 211 2.60.120.10
af_Q61410_136_272_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8973 93 211 2.60.120.10
3of1A01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8951 107 204 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A830HC67-F1-model_v4 Calmodulin 0.9136 93 208 GO:0005509
GO:0005829
AF-A0A0M3GSG2-F1-model_v4 deleted 0.8964 96 223
AF-A0A520Y4W7-F1-model_v4 Cyclic nucleotide-binding domain-containing protein 0.894 118 199 GO:0016137
GO:0016811
AF-A0A847F1G5-F1-model_v4 Cyclic nucleotide-binding domain-containing protein 0.8908 93 216
AF-A0A7V6CC55-F1-model_v4 Cyclic nucleotide-binding domain-containing protein 0.8877 102 199 GO:0004862
GO:0005829
GO:0005952
GO:0030552
GO:0034236

Map