F281233

General Info

Members Datasets Scaffolds Average Seq Length
183 160 95 458

Family's Representative Sequence

Representative Sequence 3300041999|Ga0439433_0002885|Ga0439433_0002885_1229_2698
Length 489
Sequence VNGKGSKPNVERENRVDAGFASQKIEEGSGMSKRMTANAAFIPIDSLRRNFAEVKTGMRPKESIEESNRCLYCYDAPCIKACPTGINIPSFIKKIASGNMKGAARAIMDANPVGATCSRVCPTEELCEGACVLNDSSKPIMIGDLQRYATDWAIKNEQTLFSAGQSNGKSVAVIGGGPAGLSAARELARSGFTVTIFEAKEQAGGLDTYGIVSFRLPQSISLWEVDQVKKLGVDIRTNTKVGVDVSAEELLGQYDAVVLAIGMSKVPMLGIEGEQLEGVFDAIDFVEATKTEIRADFAGKRVAVIGAGNTAIDAATCSVRLGAANVKMVYRRSREEMTAYDFEYDFAKRDGVEFQWLTAPSRIIGDEDGHVKALECIQMRLEEAEDGGRKRPVPVEGSAFLLEVDAVIKAIGQTRHLTLIEQLNLENKRGIVTVDPETYQTSNPKVYAAGDVVFGDGQGGAMVVSAAQQGKLAAYSIYNTLCTRRESYG

Samples

Sample ID Description Type Environment
1 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
2 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
3 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
4 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
5 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
6 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
7 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
8 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
9 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
10 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
11 2643221731 Bacillus sp. Root147 Isolate Unclassified
12 2643221732 Bacillus sp. Root239 Isolate Unclassified
13 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
14 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
15 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
16 2738541295 Bacillus sp. OK085 Isolate Unclassified
17 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
18 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
19 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
20 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
21 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
22 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
23 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
24 2818991459 Paenibacillus sp. 597 Isolate Unclassified
25 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
26 2842682962 Bacillus sp. R-72492 Isolate Unclassified
27 2842882022 Bacillus sp. R-71893 Isolate Unclassified
28 2849139964 Bacillus sp. R-71875 Isolate Unclassified
29 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
30 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
31 2857472729 Cohnella sp. R-74144 Isolate Unclassified
32 2857581216 Bacillus sp. R-71922 Isolate Unclassified
33 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
34 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
35 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
36 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
37 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
38 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
39 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
40 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
41 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
42 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
43 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
44 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
45 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
46 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
47 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
48 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
49 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
50 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
51 2919720352 Priestia megaterium 4340 Isolate Unclassified
52 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
53 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
54 2929004312 Priestia megaterium 1104 Isolate Unclassified
55 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
56 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
57 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
58 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
59 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
60 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
61 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
62 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
63 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
64 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
65 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
66 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
67 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
68 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
69 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
70 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
71 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
72 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
73 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
74 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
75 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
76 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
77 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
78 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
79 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
80 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
81 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
82 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
83 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
84 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
85 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
86 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
87 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
88 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
89 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
90 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
91 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
92 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
93 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
94 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
98 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
101 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
102 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
108 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
109 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
110 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
111 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
112 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
113 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
114 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
115 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
116 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
117 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
118 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
119 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
120 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
121 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
122 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
123 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
124 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
125 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
128 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
129 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
130 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
133 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
134 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
135 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
136 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
153 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
154 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
155 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
156 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
157 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
158 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
159 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
160 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 50.82
Metatranscriptomes 1.09
Isolates 48.09

Biome Distribution

Category Percentage (%)
Aerial Root 1.09
Bulb 0
Endosphere 8.74
Nodule 0
Rhizoplane 8.2
Rhizosphere 55.74
Stem 0
Stem Tuber 0
Unclassified 26.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10003056 3300003316 Bacteria 31355
2 rootH2_10018326 3300003320 Bacteria 6078
3 rootL2_10003046 3300003322 Bacteria 40497
4 Ga0055538_1000127 3300003751 Bacteria 57318
5 Ga0055538_1000221 3300003751 Bacteria 32441
6 Ga0055532_1000062 3300003758 Bacteria 148330
7 Ga0055528_1003688 3300003790 Bacteria 7593
8 Ga0055528_1005400 3300003790 Bacteria 5960
9 Ga0070671_100046978 3300005355 Bacteria 3591
10 Ga0105244_10054899 3300009036 Bacteria 2020
11 Ga0105247_10003788 3300009101 Bacteria 9807
12 Ga0105243_10012613 3300009148 Bacteria 6384
13 Ga0105246_10000842 3300011119 Bacteria 17522
14 Ga0105246_10008842 3300011119 Bacteria 6199
15 Ga0157371_10005540 3300013102 Bacteria 10624
16 Ga0157378_10005417 3300013297 Bacteria 11192
17 Ga0209784_100031 3300025224 Bacteria 318854
18 Ga0209566_100628 3300025225 Bacteria 21710
19 Ga0209147_100010 3300025229 Bacteria 741391
20 Ga0209437_101126 3300025233 Bacteria 8207
21 Ga0209673_1001544 3300025273 Bacteria 20804
22 Ga0209676_1011118 3300025292 Bacteria 3664
23 Ga0209676_1020782 3300025292 Bacteria 2219
24 Ga0209025_1000130 3300025294 Bacteria 198745
25 Ga0209025_1006879 3300025294 Bacteria 8671
26 Ga0209025_1014338 3300025294 Bacteria 4884
27 Ga0207426_1005630 3300025302 Bacteria 5668
28 Ga0207696_1003570 3300025711 Bacteria 7024
29 Ga0207655_1004809 3300025728 Bacteria 9406
30 Ga0207655_1013483 3300025728 Bacteria 4690
31 Ga0207713_1005591 3300025735 Bacteria 7826
32 Ga0207709_10010077 3300025935 Bacteria 5206
33 Ga0209371_1014008 3300027312 Bacteria 2219
34 Ga0265337_1000672 3300028556 Bacteria 18087
35 Ga0265326_10025256 3300028558 Unclassified 1694
36 Ga0265319_1000209 3300028563 Bacteria 44508
37 Ga0265319_1000547 3300028563 Bacteria 25573
38 Ga0265334_10001648 3300028573 Bacteria 10708
39 Ga0265318_10002739 3300028577 Bacteria 9238
40 Ga0265322_10000062 3300028654 Bacteria 52588
41 Ga0265322_10000080 3300028654 Bacteria 45842
42 Ga0265336_10000281 3300028666 Bacteria 35708
43 Ga0265338_10000261 3300028800 Bacteria 96027
44 Ga0265338_10001058 3300028800 Bacteria 45770
45 Ga0265338_10004016 3300028800 Bacteria 20193
46 Ga0265338_10015719 3300028800 Bacteria 8293
47 Ga0265338_10019324 3300028800 Bacteria 7235
48 Ga0265324_10000304 3300029957 Bacteria 36504
49 Ga0268256_1013296 3300030500 Bacteria 2502
50 Ga0265320_10003073 3300031240 Bacteria 11331
51 Ga0265320_10004979 3300031240 Bacteria 8612
52 Ga0265329_10000728 3300031242 Bacteria 16708
53 Ga0265340_10001991 3300031247 Bacteria 11686
54 Ga0265340_10035224 3300031247 Bacteria 2487
55 Ga0265339_10011245 3300031249 Bacteria 5521
56 Ga0265331_10001411 3300031250 Bacteria 17641
57 Ga0265316_10008735 3300031344 Bacteria 9374
58 Ga0265316_10012992 3300031344 Bacteria 7428
59 Ga0265313_10002095 3300031595 Bacteria 17791
60 Ga0265313_10026580 3300031595 Bacteria 3046
61 Ga0265314_10001187 3300031711 Bacteria 29922
62 Ga0265342_10000142 3300031712 Bacteria 80728
63 Ga0265342_10015394 3300031712 Bacteria 5031
64 Ga0395901_0309994 3300038443 Bacteria 1635
65 Ga0439436_0017797 3300041404 Bacteria 2126
66 Ga0439433_0002885 3300041999 Bacteria 3676
67 Ga0439449_0001036 3300042007 Bacteria 10948
68 Ga0439462_0007464 3300042015 Bacteria 2737
69 Ga0439462_0009695 3300042015 Bacteria 2435
70 Ga0451576_0000902 3300045051 Bacteria 56322
71 Ga0495591_022814 3300046458 Bacteria 2017
72 Ga0495660_0042685 3300046810 Bacteria 2505
73 Ga0495683_0017921 3300047323 Bacteria 3666
74 Ga0496100_0019071 3300048903 Bacteria 4083
75 Ga0496102_0051293 3300048905 Bacteria 3758
76 Ga0496105_0000730 3300048908 Bacteria 22282
77 Ga0496106_0000104 3300048909 Bacteria 64967
78 Ga0496107_0008464 3300048910 Bacteria 7120
79 Ga0496108_0004203 3300048911 Bacteria 11601
80 Ga0496110_0012492 3300048913 Bacteria 6984
81 Ga0496110_0030246 3300048913 Bacteria 4666
82 Ga0496110_0098145 3300048913 Bacteria 2625
83 Ga0496111_0017522 3300048914 Bacteria 4952
84 Ga0496111_0051311 3300048914 Bacteria 2977
85 Ga0496112_0041339 3300048915 Bacteria 4510
86 Ga0496112_0106466 3300048915 Bacteria 2774
87 Ga0496117_0046670 3300048920 Bacteria 3114
88 Ga0496119_0002859 3300048922 Bacteria 18413
89 Ga0496124_0030505 3300048927 Bacteria 4785
90 Ga0496125_0021521 3300048928 Bacteria 6013
91 Ga0501305_001412 3300049161 Bacteria 2342
92 Ga0501312_001799 3300049528 Bacteria 2197
93 Ga0501079_0029368 3300049741 Bacteria 4221
94 Ga0501081_0069391 3300049743 Bacteria 2455
95 Ga0530510_0120462 3300061734 Bacteria 1926

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042015 Ga0439462_0009695 Ga0439462_0009695_1253_2413 383
2 3300041404 Ga0439436_0017797 Ga0439436_0017797_838_2097 419
3 3300047323 Ga0495683_0017921 Ga0495683_0017921_47_1309 420
4 3300061734 Ga0530510_0120462 Ga0530510_0120462_165_1508 422
5 3300013102 Ga0157371_10005540 Ga0157371_100055405 432
6 3300025294 Ga0209025_1006879 Ga0209025_10068793 438
7 3300028654 Ga0265322_10000062 Ga0265322_1000006222 441
8 iso_pu_bacteria 2593339131 2595088832 441
9 iso_pu_bacteria 2757320391 2757564587 441
10 iso_pu_bacteria 2775507177 2777763185 441
11 iso_pu_bacteria 2775507192 2777837854 441
12 iso_pu_bacteria 2936340661 2936344229 441
13 3300045051 Ga0451576_0000902 Ga0451576_0000902_13701_15047 442
14 3300028563 Ga0265319_1000547 Ga0265319_10005473 443
15 3300028654 Ga0265322_10000080 Ga0265322_1000008022 443
16 3300028800 Ga0265338_10015719 Ga0265338_100157195 443
17 3300029957 Ga0265324_10000304 Ga0265324_1000030416 443
18 3300031240 Ga0265320_10004979 Ga0265320_100049795 443
19 3300031242 Ga0265329_10000728 Ga0265329_100007285 443
20 3300031247 Ga0265340_10035224 Ga0265340_100352242 443
21 3300031249 Ga0265339_10011245 Ga0265339_100112453 443
22 3300031250 Ga0265331_10001411 Ga0265331_100014116 443
23 3300031344 Ga0265316_10012992 Ga0265316_100129924 443
24 3300031711 Ga0265314_10001187 Ga0265314_100011874 443
25 3300031712 Ga0265342_10000142 Ga0265342_1000014278 443
26 iso_pu_bacteria 2711768088 2712196989 443
27 iso_pu_bacteria 2852673933 2852675854 443
28 iso_pu_bacteria 2916971899 2916974146 443
29 iso_pu_bacteria 2928510474 2928512000 443
30 3300028556 Ga0265337_1000672 Ga0265337_10006722 444
31 3300028558 Ga0265326_10025256 Ga0265326_100252562 444
32 3300028563 Ga0265319_1000209 Ga0265319_100020928 444
33 3300028573 Ga0265334_10001648 Ga0265334_100016482 444
34 3300028577 Ga0265318_10002739 Ga0265318_100027399 444
35 3300028666 Ga0265336_10000281 Ga0265336_1000028127 444
36 3300028800 Ga0265338_10000261 Ga0265338_1000026135 444
37 3300028800 Ga0265338_10004016 Ga0265338_100040164 444
38 3300028800 Ga0265338_10019324 Ga0265338_100193245 444
39 3300031240 Ga0265320_10003073 Ga0265320_100030735 444
40 3300031247 Ga0265340_10001991 Ga0265340_100019913 444
41 3300031344 Ga0265316_10008735 Ga0265316_100087352 444
42 3300031595 Ga0265313_10002095 Ga0265313_100020952 444
43 3300031595 Ga0265313_10026580 Ga0265313_100265803 444
44 3300031712 Ga0265342_10015394 Ga0265342_100153943 444
45 iso_pu_bacteria 2554235469 2556065418 444
46 3300003758 Ga0055532_1000062 Ga0055532_1000062116 445
47 3300025229 Ga0209147_100010 Ga0209147_100010497 445
48 3300025294 Ga0209025_1000130 Ga0209025_100013034 445
49 3300038443 Ga0395901_0309994 Ga0395901_0309994_31_1368 445
50 3300046458 Ga0495591_022814 Ga0495591_022814_606_1958 445
51 3300046810 Ga0495660_0042685 Ga0495660_0042685_444_1796 445
52 3300049741 Ga0501079_0029368 Ga0501079_0029368_129_1535 445
53 3300049743 Ga0501081_0069391 Ga0501081_0069391_166_1572 445
54 iso_pu_bacteria 8055632911 8055635035 445
55 iso_pu_bacteria 2939593269 2939594496 446
56 3300028800 Ga0265338_10001058 Ga0265338_100010582 447
57 iso_pu_bacteria 2919425241 2919431338 448
58 iso_pu_bacteria 2964375228 2964377743 448
59 iso_pu_bacteria 3001892409 3001892624 448
60 iso_pu_bacteria 8022948649 8022949722 448
61 iso_pu_bacteria 2585428059 2587738210 449
62 iso_pu_bacteria 2643221676 2644421312 449
63 iso_pu_bacteria 2643221731 2644715890 449
64 iso_pu_bacteria 2643221732 2644724239 449
65 iso_pu_bacteria 2818991459 2819673536 449
66 iso_pu_bacteria 2818991465 2819709362 449
67 iso_pu_bacteria 2842882022 2842884390 449
68 iso_pu_bacteria 2857453340 2857456815 449
69 iso_pu_bacteria 2904524088 2904524580 449
70 iso_pu_bacteria 2904755435 2904757052 449
71 iso_pu_bacteria 2919143609 2919146824 449
72 iso_pu_bacteria 2919517244 2919518747 449
73 iso_pu_bacteria 2919720352 2919723114 449
74 iso_pu_bacteria 2928093941 2928096359 449
75 iso_pu_bacteria 2929004312 2929006265 449
76 iso_pu_bacteria 2960319331 2960319980 449
77 iso_pu_bacteria 2960375949 2960380808 449
78 iso_pu_bacteria 8022914991 8022917244 449
79 iso_pu_bacteria 2671180330 2672333664 450
80 iso_pu_bacteria 2738541295 2738813241 450
81 iso_pu_bacteria 2816332186 2816866288 450
82 iso_pu_bacteria 2842682962 2842688036 450
83 iso_pu_bacteria 2849139964 2849144896 450
84 iso_pu_bacteria 2857581216 2857585791 450
85 iso_pu_bacteria 2919414237 2919417831 450
86 iso_pu_bacteria 2936361878 2936366111 450
87 iso_pu_bacteria 2971410472 2971411617 450
88 iso_pu_bacteria 8056533031 8056539589 450
89 3300048915 Ga0496112_0106466 Ga0496112_0106466_409_1776 451
90 iso_pu_bacteria 2788500588 2791212763 451
91 iso_pu_bacteria 2818991451 2819626906 451
92 iso_pu_bacteria 2904113452 2904118631 451
93 iso_pu_bacteria 2904606771 2904607021 451
94 iso_pu_bacteria 2931384279 2931385316 451
95 iso_pu_bacteria 2956897341 2956900929 451
96 iso_pu_bacteria 2977254563 2977257390 451
97 iso_pu_bacteria 2990275345 2990278353 451
98 iso_pu_bacteria 3006969106 3006970966 451
99 iso_pu_bacteria 8055531788 8055533495 451
100 iso_pu_bacteria 8057632132 8057634833 451
101 3300009036 Ga0105244_10054899 Ga0105244_100548992 452
102 3300011119 Ga0105246_10000842 Ga0105246_100008426 452
103 3300025225 Ga0209566_100628 Ga0209566_1006289 452
104 3300025233 Ga0209437_101126 Ga0209437_1011266 452
105 3300025292 Ga0209676_1011118 Ga0209676_10111183 452
106 3300025728 Ga0207655_1013483 Ga0207655_10134831 452
107 3300027312 Ga0209371_1014008 Ga0209371_10140082 452
108 3300030500 Ga0268256_1013296 Ga0268256_10132962 452
109 3300041999 Ga0439433_0002885 Ga0439433_0002885_1229_2698 452
110 3300042007 Ga0439449_0001036 Ga0439449_0001036_4058_5527 452
111 3300042015 Ga0439462_0007464 Ga0439462_0007464_97_1566 452
112 3300048913 Ga0496110_0012492 Ga0496110_0012492_3563_4921 452
113 3300048913 Ga0496110_0098145 Ga0496110_0098145_225_1595 452
114 3300048914 Ga0496111_0017522 Ga0496111_0017522_1006_2364 452
115 3300048927 Ga0496124_0030505 Ga0496124_0030505_2224_3657 452
116 3300048928 Ga0496125_0021521 Ga0496125_0021521_4477_5844 452
117 3300049161 Ga0501305_001412 Ga0501305_001412_230_1594 452
118 3300049528 Ga0501312_001799 Ga0501312_001799_229_1593 452
119 iso_pu_bacteria 2864733723 2864736584 452
120 iso_pu_bacteria 2885526491 2885532418 452
121 iso_pu_bacteria 2889042446 2889048199 452
122 iso_pu_bacteria 2904162308 2904167946 452
123 iso_pu_bacteria 2904490793 2904494467 452
124 iso_pu_bacteria 2919160200 2919165003 452
125 iso_pu_bacteria 2939679117 2939680505 452
126 iso_pu_bacteria 2945991243 2945996042 452
127 iso_pu_bacteria 2946053406 2946058746 452
128 3300003316 rootH1_10003056 rootH1_1000305621 453
129 3300003320 rootH2_10018326 rootH2_100183263 453
130 3300003322 rootL2_10003046 rootL2_1000304613 453
131 3300003751 Ga0055538_1000127 Ga0055538_10001275 453
132 3300003751 Ga0055538_1000221 Ga0055538_100022119 453
133 3300003790 Ga0055528_1003688 Ga0055528_10036885 453
134 3300003790 Ga0055528_1005400 Ga0055528_10054003 453
135 3300005355 Ga0070671_100046978 Ga0070671_1000469783 453
136 3300009101 Ga0105247_10003788 Ga0105247_100037883 453
137 3300009148 Ga0105243_10012613 Ga0105243_100126133 453
138 3300011119 Ga0105246_10008842 Ga0105246_100088423 453
139 3300013297 Ga0157378_10005417 Ga0157378_100054172 453
140 3300025224 Ga0209784_100031 Ga0209784_100031202 453
141 3300025273 Ga0209673_1001544 Ga0209673_100154411 453
142 3300025292 Ga0209676_1020782 Ga0209676_10207822 453
143 3300025294 Ga0209025_1014338 Ga0209025_10143384 453
144 3300025302 Ga0207426_1005630 Ga0207426_10056303 453
145 3300025711 Ga0207696_1003570 Ga0207696_10035706 453
146 3300025728 Ga0207655_1004809 Ga0207655_10048093 453
147 3300025735 Ga0207713_1005591 Ga0207713_10055916 453
148 3300025935 Ga0207709_10010077 Ga0207709_100100774 453
149 3300048903 Ga0496100_0019071 Ga0496100_0019071_2279_3781 453
150 3300048905 Ga0496102_0051293 Ga0496102_0051293_175_1677 453
151 3300048908 Ga0496105_0000730 Ga0496105_0000730_10397_11899 453
152 3300048909 Ga0496106_0000104 Ga0496106_0000104_61478_62980 453
153 3300048910 Ga0496107_0008464 Ga0496107_0008464_3339_4841 453
154 3300048911 Ga0496108_0004203 Ga0496108_0004203_9903_11405 453
155 3300048913 Ga0496110_0030246 Ga0496110_0030246_994_2496 453
156 3300048914 Ga0496111_0051311 Ga0496111_0051311_545_2047 453
157 3300048915 Ga0496112_0041339 Ga0496112_0041339_1989_3491 453
158 3300048920 Ga0496117_0046670 Ga0496117_0046670_1096_2598 453
159 3300048922 Ga0496119_0002859 Ga0496119_0002859_12961_14463 453
160 iso_pu_bacteria 2571042143 2571528176 453
161 iso_pu_bacteria 2571042588 2573036893 453
162 iso_pu_bacteria 2576861424 2578339167 453
163 iso_pu_bacteria 2579778775 2580931023 453
164 iso_pu_bacteria 2600255286 2601640298 453
165 iso_pu_bacteria 2619619294 2621277624 453
166 iso_pu_bacteria 2728368933 2728531198 453
167 iso_pu_bacteria 2738541299 2738840536 453
168 iso_pu_bacteria 2857472729 2857477949 453
169 iso_pu_bacteria 2857604169 2857605910 453
170 iso_pu_bacteria 2881636855 2881641810 453
171 iso_pu_bacteria 2889049205 2889054138 453
172 iso_pu_bacteria 2938649242 2938652681 453
173 iso_pu_bacteria 2968558590 2968561846 453
174 iso_pu_bacteria 2971403814 2971410208 453
175 iso_pu_bacteria 2971511577 2971514237 453
176 iso_pu_bacteria 2980176882 2980180453 453
177 iso_pu_bacteria 2984527788 2984532628 453
178 iso_pu_bacteria 2984532647 2984533885 453
179 iso_pu_bacteria 2988225383 2988227597 453
180 iso_pu_bacteria 2996632988 2996637934 453
181 iso_pu_bacteria 3006984091 3006985799 453
182 iso_pu_bacteria 8022893055 8022898062 453
183 iso_pu_bacteria 8054465665 8054471602 453

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

178

206

0.97

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

173

212

0.97

PF14691

Fer4_20

Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster

47

158

0.96

PF00890

FAD_binding_2

FAD binding domain

170

210

0.93

PF01266

DAO

FAD dependent oxidoreductase

170

210

0.92

PF01494

FAD_binding_3

FAD binding domain

169

206

0.92

PF12831

FAD_oxidored

FAD dependent oxidoreductase

170

240

0.92

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

301

377

0.88

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

169

470

0.84

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

170

250

0.8

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

223

450

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lke-assembly1.cif.gz_A in meso full-length rat kmo in complex with an inhibitor identified via dna-encoded chemical library screening 0.9906 132 165
4mig-assembly1.cif.gz_A pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9659 132 163
4mig-assembly1.cif.gz_C pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9636 132 163
4mif-assembly1.cif.gz_D pyranose 2-oxidase from phanerochaete chrysosporium, wild type from natural source 0.9633 132 163
4mih-assembly2.cif.gz_H pyranose 2-oxidase from phanerochaete chrysosporium, recombinant h158a mutant 0.9598 132 163
ID Description Score Start End Superfamily
af_A0A1D6E7M3_47_537_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9966 134 168 3.50.50.60
af_Q8H191_31_475_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9889 135 168 3.50.50.60
af_O53734_9_416_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9611 135 168 3.50.50.60
af_Q46820_444_536_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9592 258 348 3.50.50.60
af_M9NFH8_1768_1873_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9569 132 234 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3D1UBC4-F1-model_v4 deleted 0.9716 267 385
AF-C2Z1C8-F1-model_v4 deleted 0.9705 179 451
AF-A0A1H2TAJ7-F1-model_v4 Glutamate synthase (NADPH/NADH) small chain 0.9677 6 447 GO:0016491
GO:0051536
AF-A0A485D8H6-F1-model_v4 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.965 128 218 GO:0004355
AF-A0A5J6SPL2-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9632 6 453 GO:0016491
GO:0051536

Feature Viewer

pLDDT pTM Quality
90.05 0.88 High
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Predicted Structure (AlphaFold2)

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