F281389

General Info

Members Datasets Scaffolds Average Seq Length
183 100 182 194

Family's Representative Sequence

Representative Sequence 3300046663|Ga0495635_0242912|Ga0495635_0242912_420_1082
Length 220
Sequence VRSHRSVRLAVFASGYGSNFEALANAAARDGLGGSIVALLCDTAGAPVLERARRHGVEALLPPVGRFRTRLEDERPWLAALRERRVDVILLAGFMRRLHALVLEAFAGRILNIHPSLLPAFPGLDAIRQAWRRGVRVTGCTVHLVEAALDAGPIVAQAPVEVHDGDTLASLEARVHDAEHALYPRAVRRWLVEPWGVEDGRLEFGRGAGLVLPEAEAAHG

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
16 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
17 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
18 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
19 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
20 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
21 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
31 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
32 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
33 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
34 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
35 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
36 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
37 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
40 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
41 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
42 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
43 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
44 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
45 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
46 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
47 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
60 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
61 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
62 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
68 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
71 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
72 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
75 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
76 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
79 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
80 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
95 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
100 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.45
Metatranscriptomes 0
Isolates 0.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.27
Stem 0
Stem Tuber 0
Unclassified 2.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10183061 3300003320 Bacteria 7998
2 rootH2_10221064 3300003320 Bacteria 1151
3 rootL2_10020464 3300003322 Bacteria 2715
4 Ga0070683_100093367 3300005329 Unclassified 2827
5 Ga0068869_100000048 3300005334 Bacteria 50814
6 Ga0068869_101058938 3300005334 Bacteria 708
7 Ga0068868_100033424 3300005338 Bacteria 3964
8 Ga0070708_100288409 3300005445 Bacteria 1545
9 Ga0068867_100000269 3300005459 Bacteria 34206
10 Ga0068857_100020981 3300005577 Bacteria 5748
11 Ga0068856_100001531 3300005614 Bacteria 24224
12 Ga0068866_10018473 3300005718 Bacteria 3154
13 Ga0068863_100899731 3300005841 Bacteria 885
14 Ga0070717_10001137 3300006028 Bacteria 17980
15 Ga0070717_10311559 3300006028 Bacteria 1401
16 Ga0097621_100098100 3300006237 Bacteria 2461
17 Ga0068871_100002339 3300006358 Bacteria 12917
18 Ga0068865_100002033 3300006881 Bacteria 11937
19 Ga0105246_10375691 3300011119 Bacteria 1173
20 Ga0157378_10062912 3300013297 Bacteria 3315
21 Ga0163163_10375388 3300014325 Bacteria 1479
22 Ga0157376_11613549 3300014969 Bacteria 683
23 Ga0207642_10094432 3300025899 Bacteria 1486
24 Ga0207704_10005143 3300025938 Bacteria 6023
25 Ga0207689_10000731 3300025942 Bacteria 31579
26 Ga0207661_10049380 3300025944 Bacteria 3349
27 Ga0207677_10013836 3300026023 Bacteria 4689
28 Ga0207702_10001191 3300026078 Bacteria 26401
29 Ga0207702_10344854 3300026078 Bacteria 1424
30 Ga0207641_10746423 3300026088 Bacteria 966
31 Ga0207648_10002825 3300026089 Bacteria 18422
32 Ga0207674_10035536 3300026116 Bacteria 5200
33 Ga0265337_1015580 3300028556 Bacteria 2483
34 Ga0265326_10023102 3300028558 Unclassified 1778
35 Ga0265319_1003846 3300028563 Bacteria 7682
36 Ga0265319_1024597 3300028563 Bacteria 2165
37 Ga0265334_10037273 3300028573 Unclassified 1917
38 Ga0265334_10037401 3300028573 Bacteria 1913
39 Ga0265318_10000002 3300028577 Bacteria 428208
40 Ga0265318_10001556 3300028577 Bacteria 13329
41 Ga0265318_10014431 3300028577 Bacteria 3315
42 Ga0265318_10018079 3300028577 Bacteria 2883
43 Ga0265318_10025336 3300028577 Bacteria 2343
44 Ga0265318_10146932 3300028577 Bacteria 865
45 Ga0265323_10000387 3300028653 Bacteria 25382
46 Ga0265323_10001967 3300028653 Bacteria 9682
47 Ga0265323_10009347 3300028653 Bacteria 4012
48 Ga0265323_10011296 3300028653 Unclassified 3606
49 Ga0265323_10024151 3300028653 Bacteria 2314
50 Ga0265323_10045503 3300028653 Bacteria 1576
51 Ga0265323_10056301 3300028653 Bacteria 1379
52 Ga0265323_10057366 3300028653 Unclassified 1363
53 Ga0265322_10005863 3300028654 Bacteria 3623
54 Ga0265336_10003496 3300028666 Bacteria 6147
55 Ga0265338_10003113 3300028800 Bacteria 23744
56 Ga0265338_10043259 3300028800 Bacteria 4180
57 Ga0265338_10059862 3300028800 Bacteria 3352
58 Ga0265324_10010362 3300029957 Bacteria 3597
59 Ga0265324_10097372 3300029957 Unclassified 1000
60 Ga0265330_10005843 3300031235 Bacteria 6106
61 Ga0265330_10015772 3300031235 Bacteria 3491
62 Ga0265330_10033244 3300031235 Bacteria 2307
63 Ga0265330_10101892 3300031235 Bacteria 1229
64 Ga0265330_10105215 3300031235 Bacteria 1207
65 Ga0265330_10200087 3300031235 Bacteria 845
66 Ga0265332_10019981 3300031238 Bacteria 2958
67 Ga0265328_10014673 3300031239 Bacteria 3081
68 Ga0265328_10018993 3300031239 Unclassified 2644
69 Ga0265320_10004402 3300031240 Bacteria 9236
70 Ga0265320_10004866 3300031240 Bacteria 8721
71 Ga0265320_10007138 3300031240 Bacteria 6965
72 Ga0265320_10011043 3300031240 Bacteria 5335
73 Ga0265320_10072359 3300031240 Bacteria 1622
74 Ga0265325_10011092 3300031241 Bacteria 5186
75 Ga0265329_10106993 3300031242 Unclassified 892
76 Ga0265331_10060351 3300031250 Bacteria 1792
77 Ga0265327_10002371 3300031251 Bacteria 20068
78 Ga0265327_10005771 3300031251 Bacteria 10192
79 Ga0265327_10006032 3300031251 Bacteria 9832
80 Ga0265327_10038385 3300031251 Bacteria 2613
81 Ga0265316_10013739 3300031344 Bacteria 7177
82 Ga0265316_10014945 3300031344 Bacteria 6807
83 Ga0265316_10020449 3300031344 Bacteria 5632
84 Ga0265316_10022793 3300031344 Bacteria 5270
85 Ga0265316_10047143 3300031344 Bacteria 3410
86 Ga0265316_10057907 3300031344 Bacteria 3020
87 Ga0265316_10113639 3300031344 Bacteria 2049
88 Ga0265316_10277292 3300031344 Bacteria 1226
89 Ga0307408_100000003 3300031548 Bacteria 618438
90 Ga0265313_10001890 3300031595 Bacteria 19029
91 Ga0265313_10003194 3300031595 Bacteria 13493
92 Ga0265313_10014672 3300031595 Bacteria 4615
93 Ga0265313_10028342 3300031595 Bacteria 2913
94 Ga0265314_10002425 3300031711 Bacteria 19125
95 Ga0265314_10002589 3300031711 Bacteria 18305
96 Ga0265314_10061243 3300031711 Bacteria 2564
97 Ga0265314_10084488 3300031711 Bacteria 2084
98 Ga0265314_10229233 3300031711 Bacteria 1079
99 Ga0265342_10011144 3300031712 Bacteria 6170
100 Ga0265342_10067994 3300031712 Bacteria 2083
101 Ga0265342_10070950 3300031712 Bacteria 2031
102 Ga0265342_10097046 3300031712 Unclassified 1683
103 Ga0265342_10120701 3300031712 Bacteria 1476
104 Ga0307413_10039209 3300031824 Bacteria 2753
105 Ga0307410_10000009 3300031852 Bacteria 91471
106 Ga0307407_10001545 3300031903 Bacteria 8446
107 Ga0307412_10004508 3300031911 Bacteria 7761
108 Ga0307409_100000005 3300031995 Bacteria 84226
109 Ga0307416_100000275 3300032002 Bacteria 27144
110 Ga0307416_100254738 3300032002 Bacteria 1711
111 Ga0373934_0000309 3300035086 Bacteria 17140
112 Ga0373951_0011717 3300035091 Bacteria 1971
113 Ga0373956_0183578 3300035119 Unclassified 989
114 Ga0373955_0008705 3300035172 Bacteria 4723
115 Ga0373935_0250059 3300035692 Bacteria 1240
116 Ga0373927_0719512 3300035695 Bacteria 659
117 Ga0373933_0049673 3300035724 Bacteria 2502
118 Ga0395905_0000016 3300037471 Bacteria 382308
119 Ga0451853_1246797 3300041512 Bacteria 796
120 Ga0439431_0071181 3300041997 Bacteria 927
121 Ga0451577_0001800 3300042876 Bacteria 27427
122 Ga0451577_0123036 3300042876 Bacteria 2324
123 Ga0451577_0195516 3300042876 Bacteria 1825
124 Ga0451577_0278604 3300042876 Bacteria 1515
125 Ga0453683_0000873 3300044673 Bacteria 28991
126 Ga0453683_0022963 3300044673 Bacteria 3976
127 Ga0453683_0094240 3300044673 Bacteria 1878
128 Ga0453683_0326806 3300044673 Bacteria 983
129 Ga0453684_0118661 3300044712 Bacteria 3199
130 Ga0453684_0448300 3300044712 Bacteria 1437
131 Ga0451576_0000396 3300045051 Bacteria 101504
132 Ga0451576_0001157 3300045051 Bacteria 47541
133 Ga0451576_0007079 3300045051 Bacteria 13549
134 Ga0451576_0023945 3300045051 Bacteria 6600
135 Ga0466967_0152784 3300045976 Bacteria 2159
136 Ga0495592_0036062 3300046454 Bacteria 3725
137 Ga0495608_0054231 3300046511 Bacteria 2650
138 Ga0495635_0242912 3300046663 Bacteria 1215
139 Ga0495657_0023002 3300046675 Bacteria 4458
140 Ga0495600_0292739 3300046809 Bacteria 1028
141 Ga0495680_0069487 3300047322 Bacteria 2687
142 Ga0501031_0018362 3300049568 Bacteria 4553
143 Ga0501032_0000674 3300049569 Bacteria 27770
144 Ga0501032_0000742 3300049569 Bacteria 26486
145 Ga0501032_0056326 3300049569 Bacteria 2643
146 Ga0501033_0001582 3300049570 Bacteria 20025
147 Ga0501033_0040356 3300049570 Bacteria 3484
148 Ga0501034_0129963 3300049571 Bacteria 2502
149 Ga0501036_0080230 3300049572 Bacteria 2758
150 Ga0501036_0194619 3300049572 Unclassified 1706
151 Ga0501037_0227425 3300049573 Unclassified 1310
152 Ga0501038_0001870 3300049574 Bacteria 19444
153 Ga0501039_0131951 3300049575 Bacteria 1960
154 Ga0501042_0053417 3300049578 Bacteria 2882
155 Ga0501043_0072052 3300049579 Unclassified 2714
156 Ga0501043_0125968 3300049579 Bacteria 2008
157 Ga0501046_0005595 3300049580 Bacteria 11217
158 Ga0501046_0005695 3300049580 Bacteria 11118
159 Ga0501046_0039019 3300049580 Bacteria 3806
160 Ga0501046_0081182 3300049580 Bacteria 2504
161 Ga0501047_0020229 3300049581 Bacteria 6392
162 Ga0501047_0024576 3300049581 Bacteria 5783
163 Ga0501047_0037427 3300049581 Bacteria 4691
164 Ga0501047_0346970 3300049581 Bacteria 1321
165 Ga0501048_0013159 3300049582 Bacteria 6140
166 Ga0501048_0133020 3300049582 Unclassified 1758
167 Ga0501048_0133329 3300049582 Bacteria 1755
168 Ga0501070_0106887 3300049586 Bacteria 2313
169 Ga0501070_0260344 3300049586 Bacteria 1418
170 Ga0501227_047987 3300049665 Bacteria 1071
171 Ga0501243_000256 3300049675 Bacteria 6759
172 Ga0501080_0251552 3300049742 Unclassified 1611
173 Ga0501035_0000520 3300049822 Bacteria 43341
174 Ga0501035_0003775 3300049822 Bacteria 14435
175 Ga0501035_0007609 3300049822 Bacteria 10119
176 Ga0501044_0000626 3300049823 Bacteria 42628
177 Ga0501044_0001980 3300049823 Bacteria 23675
178 Ga0501044_0010903 3300049823 Bacteria 9864
179 Ga0501044_0100868 3300049823 Bacteria 2904
180 Ga0501044_0109212 3300049823 Bacteria 2775
181 Ga0495601_0353490 3300053077 Bacteria 955
182 Ga0466962_0105180 3300061719 Unclassified 1357

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031235 Ga0265330_10101892 Ga0265330_101018922 160
2 3300028800 Ga0265338_10043259 Ga0265338_100432592 165
3 3300005841 Ga0068863_100899731 Ga0068863_1008997311 167
4 3300026088 Ga0207641_10746423 Ga0207641_107464231 167
5 3300035086 Ga0373934_0000309 Ga0373934_0000309_15387_16049 170
6 3300035119 Ga0373956_0183578 Ga0373956_0183578_94_756 170
7 3300035172 Ga0373955_0008705 Ga0373955_0008705_3517_4179 170
8 3300035724 Ga0373933_0049673 Ga0373933_0049673_796_1458 170
9 3300046454 Ga0495592_0036062 Ga0495592_0036062_538_1200 170
10 3300046511 Ga0495608_0054231 Ga0495608_0054231_1578_2240 171
11 3300046675 Ga0495657_0023002 Ga0495657_0023002_3453_4115 171
12 3300053077 Ga0495601_0353490 Ga0495601_0353490_194_856 171
13 3300026078 Ga0207702_10344854 Ga0207702_103448541 175
14 3300028653 Ga0265323_10056301 Ga0265323_100563011 175
15 3300031235 Ga0265330_10015772 Ga0265330_100157723 175
16 3300049582 Ga0501048_0133020 Ga0501048_0133020_389_937 182
17 iso_pu_bacteria 2786546940 2788432973 187
18 3300005445 Ga0070708_100288409 Ga0070708_1002884092 188
19 3300013297 Ga0157378_10062912 Ga0157378_100629122 188
20 3300046663 Ga0495635_0242912 Ga0495635_0242912_420_1082 188
21 3300046809 Ga0495600_0292739 Ga0495600_0292739_356_1018 188
22 3300047322 Ga0495680_0069487 Ga0495680_0069487_601_1263 188
23 3300028563 Ga0265319_1003846 Ga0265319_10038466 189
24 3300028563 Ga0265319_1024597 Ga0265319_10245972 189
25 3300028577 Ga0265318_10018079 Ga0265318_100180793 189
26 3300031239 Ga0265328_10014673 Ga0265328_100146734 189
27 3300031240 Ga0265320_10007138 Ga0265320_100071383 189
28 3300031240 Ga0265320_10011043 Ga0265320_100110433 189
29 3300031251 Ga0265327_10038385 Ga0265327_100383851 189
30 3300031344 Ga0265316_10020449 Ga0265316_100204492 189
31 3300031595 Ga0265313_10003194 Ga0265313_100031946 189
32 3300031711 Ga0265314_10084488 Ga0265314_100844883 189
33 3300031711 Ga0265314_10229233 Ga0265314_102292332 189
34 3300031712 Ga0265342_10011144 Ga0265342_100111446 189
35 3300031903 Ga0307407_10001545 Ga0307407_100015458 189
36 3300045051 Ga0451576_0000396 Ga0451576_0000396_4277_4846 189
37 3300045051 Ga0451576_0007079 Ga0451576_0007079_7959_8528 189
38 3300028577 Ga0265318_10001556 Ga0265318_100015567 190
39 3300028577 Ga0265318_10146932 Ga0265318_101469322 190
40 3300028653 Ga0265323_10045503 Ga0265323_100455031 190
41 3300029957 Ga0265324_10097372 Ga0265324_100973722 190
42 3300031235 Ga0265330_10005843 Ga0265330_100058436 190
43 3300031251 Ga0265327_10005771 Ga0265327_100057715 190
44 3300031251 Ga0265327_10006032 Ga0265327_1000603210 190
45 3300031711 Ga0265314_10061243 Ga0265314_100612433 190
46 3300045051 Ga0451576_0001157 Ga0451576_0001157_19758_20330 190
47 3300003320 rootH2_10183061 rootH2_101830617 191
48 3300003320 rootH2_10221064 rootH2_102210642 191
49 3300003322 rootL2_10020464 rootL2_100204643 191
50 3300005329 Ga0070683_100093367 Ga0070683_1000933672 191
51 3300005334 Ga0068869_100000048 Ga0068869_10000004816 191
52 3300005334 Ga0068869_101058938 Ga0068869_1010589381 191
53 3300005338 Ga0068868_100033424 Ga0068868_1000334242 191
54 3300005459 Ga0068867_100000269 Ga0068867_10000026935 191
55 3300005577 Ga0068857_100020981 Ga0068857_1000209816 191
56 3300005614 Ga0068856_100001531 Ga0068856_1000015319 191
57 3300005718 Ga0068866_10018473 Ga0068866_100184732 191
58 3300006028 Ga0070717_10001137 Ga0070717_100011379 191
59 3300006028 Ga0070717_10311559 Ga0070717_103115592 191
60 3300006237 Ga0097621_100098100 Ga0097621_1000981004 191
61 3300006358 Ga0068871_100002339 Ga0068871_1000023399 191
62 3300006881 Ga0068865_100002033 Ga0068865_1000020339 191
63 3300011119 Ga0105246_10375691 Ga0105246_103756912 191
64 3300014325 Ga0163163_10375388 Ga0163163_103753882 191
65 3300014969 Ga0157376_11613549 Ga0157376_116135491 191
66 3300025899 Ga0207642_10094432 Ga0207642_100944321 191
67 3300025938 Ga0207704_10005143 Ga0207704_100051434 191
68 3300025942 Ga0207689_10000731 Ga0207689_1000073116 191
69 3300025944 Ga0207661_10049380 Ga0207661_100493803 191
70 3300026023 Ga0207677_10013836 Ga0207677_100138363 191
71 3300026078 Ga0207702_10001191 Ga0207702_1000119119 191
72 3300026089 Ga0207648_10002825 Ga0207648_100028254 191
73 3300026116 Ga0207674_10035536 Ga0207674_100355366 191
74 3300028556 Ga0265337_1015580 Ga0265337_10155803 191
75 3300028558 Ga0265326_10023102 Ga0265326_100231023 191
76 3300028573 Ga0265334_10037273 Ga0265334_100372732 191
77 3300028573 Ga0265334_10037401 Ga0265334_100374012 191
78 3300028577 Ga0265318_10000002 Ga0265318_10000002281 191
79 3300028577 Ga0265318_10014431 Ga0265318_100144313 191
80 3300028577 Ga0265318_10025336 Ga0265318_100253362 191
81 3300028653 Ga0265323_10000387 Ga0265323_1000038723 191
82 3300028653 Ga0265323_10001967 Ga0265323_100019675 191
83 3300028653 Ga0265323_10009347 Ga0265323_100093475 191
84 3300028653 Ga0265323_10011296 Ga0265323_100112963 191
85 3300028653 Ga0265323_10024151 Ga0265323_100241511 191
86 3300028653 Ga0265323_10057366 Ga0265323_100573662 191
87 3300028654 Ga0265322_10005863 Ga0265322_100058632 191
88 3300028666 Ga0265336_10003496 Ga0265336_100034966 191
89 3300028800 Ga0265338_10003113 Ga0265338_100031135 191
90 3300028800 Ga0265338_10059862 Ga0265338_100598622 191
91 3300029957 Ga0265324_10010362 Ga0265324_100103624 191
92 3300031235 Ga0265330_10033244 Ga0265330_100332442 191
93 3300031235 Ga0265330_10105215 Ga0265330_101052151 191
94 3300031235 Ga0265330_10200087 Ga0265330_102000872 191
95 3300031238 Ga0265332_10019981 Ga0265332_100199813 191
96 3300031239 Ga0265328_10018993 Ga0265328_100189932 191
97 3300031240 Ga0265320_10004402 Ga0265320_100044027 191
98 3300031240 Ga0265320_10004866 Ga0265320_100048663 191
99 3300031240 Ga0265320_10072359 Ga0265320_100723592 191
100 3300031241 Ga0265325_10011092 Ga0265325_100110922 191
101 3300031242 Ga0265329_10106993 Ga0265329_101069931 191
102 3300031250 Ga0265331_10060351 Ga0265331_100603512 191
103 3300031251 Ga0265327_10002371 Ga0265327_100023713 191
104 3300031344 Ga0265316_10013739 Ga0265316_100137398 191
105 3300031344 Ga0265316_10014945 Ga0265316_100149453 191
106 3300031344 Ga0265316_10022793 Ga0265316_100227936 191
107 3300031344 Ga0265316_10047143 Ga0265316_100471432 191
108 3300031344 Ga0265316_10057907 Ga0265316_100579074 191
109 3300031344 Ga0265316_10113639 Ga0265316_101136392 191
110 3300031344 Ga0265316_10277292 Ga0265316_102772922 191
111 3300031548 Ga0307408_100000003 Ga0307408_100000003478 191
112 3300031595 Ga0265313_10001890 Ga0265313_100018908 191
113 3300031595 Ga0265313_10014672 Ga0265313_100146725 191
114 3300031595 Ga0265313_10028342 Ga0265313_100283422 191
115 3300031711 Ga0265314_10002425 Ga0265314_100024253 191
116 3300031711 Ga0265314_10002589 Ga0265314_100025894 191
117 3300031712 Ga0265342_10067994 Ga0265342_100679942 191
118 3300031712 Ga0265342_10070950 Ga0265342_100709502 191
119 3300031712 Ga0265342_10097046 Ga0265342_100970463 191
120 3300031712 Ga0265342_10120701 Ga0265342_101207012 191
121 3300031824 Ga0307413_10039209 Ga0307413_100392094 191
122 3300031852 Ga0307410_10000009 Ga0307410_1000000921 191
123 3300031911 Ga0307412_10004508 Ga0307412_100045084 191
124 3300031995 Ga0307409_100000005 Ga0307409_10000000537 191
125 3300032002 Ga0307416_100000275 Ga0307416_10000027511 191
126 3300032002 Ga0307416_100254738 Ga0307416_1002547383 191
127 3300035091 Ga0373951_0011717 Ga0373951_0011717_1192_1770 191
128 3300035692 Ga0373935_0250059 Ga0373935_0250059_319_894 191
129 3300035695 Ga0373927_0719512 Ga0373927_0719512_35_619 191
130 3300037471 Ga0395905_0000016 Ga0395905_0000016_226792_227367 191
131 3300041512 Ga0451853_1246797 Ga0451853_1246797_111_686 191
132 3300041997 Ga0439431_0071181 Ga0439431_0071181_109_690 191
133 3300042876 Ga0451577_0001800 Ga0451577_0001800_21382_21984 191
134 3300042876 Ga0451577_0123036 Ga0451577_0123036_87_674 191
135 3300042876 Ga0451577_0195516 Ga0451577_0195516_654_1232 191
136 3300042876 Ga0451577_0278604 Ga0451577_0278604_147_725 191
137 3300044673 Ga0453683_0000873 Ga0453683_0000873_3850_4437 191
138 3300044673 Ga0453683_0022963 Ga0453683_0022963_25_612 191
139 3300044673 Ga0453683_0094240 Ga0453683_0094240_316_903 191
140 3300044673 Ga0453683_0326806 Ga0453683_0326806_41_619 191
141 3300044712 Ga0453684_0118661 Ga0453684_0118661_1773_2360 191
142 3300044712 Ga0453684_0448300 Ga0453684_0448300_557_1159 191
143 3300045051 Ga0451576_0023945 Ga0451576_0023945_2095_2682 191
144 3300045976 Ga0466967_0152784 Ga0466967_0152784_215_796 191
145 3300049568 Ga0501031_0018362 Ga0501031_0018362_3223_3813 191
146 3300049569 Ga0501032_0000674 Ga0501032_0000674_1140_1721 191
147 3300049569 Ga0501032_0000742 Ga0501032_0000742_19523_20113 191
148 3300049569 Ga0501032_0056326 Ga0501032_0056326_797_1375 191
149 3300049570 Ga0501033_0001582 Ga0501033_0001582_345_923 191
150 3300049570 Ga0501033_0040356 Ga0501033_0040356_2690_3280 191
151 3300049571 Ga0501034_0129963 Ga0501034_0129963_1480_2070 191
152 3300049572 Ga0501036_0080230 Ga0501036_0080230_691_1281 191
153 3300049572 Ga0501036_0194619 Ga0501036_0194619_750_1331 191
154 3300049573 Ga0501037_0227425 Ga0501037_0227425_704_1282 191
155 3300049574 Ga0501038_0001870 Ga0501038_0001870_18296_18886 191
156 3300049575 Ga0501039_0131951 Ga0501039_0131951_615_1205 191
157 3300049578 Ga0501042_0053417 Ga0501042_0053417_1766_2356 191
158 3300049579 Ga0501043_0072052 Ga0501043_0072052_525_1106 191
159 3300049579 Ga0501043_0125968 Ga0501043_0125968_69_659 191
160 3300049580 Ga0501046_0005595 Ga0501046_0005595_318_899 191
161 3300049580 Ga0501046_0005695 Ga0501046_0005695_8742_9320 191
162 3300049580 Ga0501046_0039019 Ga0501046_0039019_368_946 191
163 3300049580 Ga0501046_0081182 Ga0501046_0081182_1511_2092 191
164 3300049581 Ga0501047_0020229 Ga0501047_0020229_3696_4274 191
165 3300049581 Ga0501047_0024576 Ga0501047_0024576_3358_3936 191
166 3300049581 Ga0501047_0037427 Ga0501047_0037427_2523_3113 191
167 3300049581 Ga0501047_0346970 Ga0501047_0346970_706_1284 191
168 3300049582 Ga0501048_0013159 Ga0501048_0013159_1756_2346 191
169 3300049582 Ga0501048_0133329 Ga0501048_0133329_983_1561 191
170 3300049586 Ga0501070_0106887 Ga0501070_0106887_534_1124 191
171 3300049586 Ga0501070_0260344 Ga0501070_0260344_169_762 191
172 3300049665 Ga0501227_047987 Ga0501227_047987_351_926 191
173 3300049675 Ga0501243_000256 Ga0501243_000256_937_1512 191
174 3300049742 Ga0501080_0251552 Ga0501080_0251552_760_1338 191
175 3300049822 Ga0501035_0000520 Ga0501035_0000520_3246_3827 191
176 3300049822 Ga0501035_0003775 Ga0501035_0003775_12283_12861 191
177 3300049822 Ga0501035_0007609 Ga0501035_0007609_8180_8770 191
178 3300049823 Ga0501044_0000626 Ga0501044_0000626_2470_3051 191
179 3300049823 Ga0501044_0001980 Ga0501044_0001980_11114_11707 191
180 3300049823 Ga0501044_0010903 Ga0501044_0010903_1479_2069 191
181 3300049823 Ga0501044_0100868 Ga0501044_0100868_1437_2015 191
182 3300049823 Ga0501044_0109212 Ga0501044_0109212_1480_2070 191
183 3300061719 Ga0466962_0105180 Ga0466962_0105180_423_1004 191

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

7

187

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kcq-assembly2.cif.gz_B crystal structure of phosphoribosylglycinamide formyltransferase from anaplasma phagocytophilum 0.9626 1 190
3kcq-assembly2.cif.gz_D-3 crystal structure of phosphoribosylglycinamide formyltransferase from anaplasma phagocytophilum 0.9615 1 190
3tqr-assembly1.cif.gz_A structure of the phosphoribosylglycinamide formyltransferase (purn) in complex with ches from coxiella burnetii 0.958 1 190
2ywr-assembly1.cif.gz_A crystal structure of gar transformylase from aquifex aeolicus 0.9554 1 190
1c2t-assembly1.cif.gz_A new insights into inhibitor design from the crystal structure and nmr studies of e. coli gar transformylase in complex with beta-gar and 10-formyl-5,8,10-trideazafolic acid. 0.9542 1 190
ID Description Score Start End Superfamily
3kcqB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9626 1 190 3.40.50.170
af_Q2FZI7_1_188_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.955 1 188 3.40.50.170
2ywrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9521 1 190 3.40.50.170
4s1nA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.949 1 188 3.40.50.170
3aufA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9429 1 190 3.40.50.170
ID Description Score Start End GO Terms
AF-A0A1Z8SVC5-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) 0.9874 107 190 GO:0004644
GO:0005829
GO:0006189
AF-A0A661Q5H0-F1-model_v4 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.9797 71 190 GO:0004644
GO:0005829
GO:0006189
AF-A0A3D0RAG4-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) 0.9769 84 190 GO:0004644
GO:0005829
GO:0006189
AF-D0VFF5-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) 0.9767 104 175 GO:0004644
GO:0005829
GO:0006189
AF-A0A0F3NGM6-F1-model_v4 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.9723 71 190 GO:0004644
GO:0005737
GO:0006189

Feature Viewer

pLDDT pTM Quality
94.59 0.9 High
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Predicted Structure (AlphaFold2)

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