F281563
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 183 | 142 | 166 | 561 |
Family's Representative Sequence
| Representative Sequence | 3300049823|Ga0501044_0039901|Ga0501044_0039901_2353_4149 |
| Length | 593 |
| Sequence | MTAGSHRTIVRAKTGAESAALDHSMSTVDDDAMPSLAPARGLSALLDRATGSHRRAAALLIVFSLIAFLPGFFQIPPVDRDEARFAQSSKQMMESGEYIDIHFQGEVRYKKPVGIYWLQVAAVEAGEAIGIPQARTTIWLYRIPSLIGATGAVLLTYWAALAFVGRRAALLASSILLGVEARLAKTDAMLLSMCVAAMGAMGRLYLSTRGGPEEVRGWRLPAILWTAAAGGVLLKGPLILMFIGLAAATLSICDRSVRWLRALRPIAGIAWMLLLAVPWFAAIVAKSGASFFVQSVGHDMLAKVASGQEAHGAPPGLYLLLFFVTFWPGAVLATLAAPRVWQTRREPAVRFLLAWLIPSWIVFEAVITKLPHYVLPLYPAIAILIAMVVDQGALVKTRWLIRGTVGWFIFPVVIAILVPIAFILIDRDLGIVAWPTAAAAMIFGLFAWWLYEVDGPERSLLRGMMASVFMAFTVYAVTFPALTPLFPSALVAQAVGAADCANPRVASTGYYQEPSLVFLLGTKTQFTDGPGAAEFLNKGVCRFALVDARSERSFVQRANAIGLRYALSQRIDGYNISVGRPVSMTMFRSMTNR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513237096 | Bradyrhizobium pachyrhizi USDA 3259 | Isolate | Nodule |
| 2 | 2667528175 | Rhizobium tropici NFR14 | Isolate | Rhizoplane |
| 3 | 2791355197 | Bradyrhizobium sp. C9 | Isolate | Nodule |
| 4 | 2885374607 | Bradyrhizobium sp. NAS96.2 | Isolate | Unclassified |
| 5 | 2903748898 | Bradyrhizobium uaiense UFLA 03-164 | Isolate | Nodule |
| 6 | 2904690495 | Bradyrhizobium ivorense CI-1B | Isolate | Nodule |
| 7 | 2906610324 | |||
| 8 | 2906635258 | Bradyrhizobium sp. USDA 3458 | Isolate | Unclassified |
| 9 | 2906660503 | Bradyrhizobium brasilense UFLA 03-321 | Isolate | Unclassified |
| 10 | 2908739725 | Bradyrhizobium sp. UFLA03-84 | Isolate | Nodule |
| 11 | 2908756301 | Bradyrhizobium ivorense CI-41S | Isolate | Nodule |
| 12 | 2922425934 | |||
| 13 | 2935630451 | Bradyrhizobium sp. I1.14.4 | Isolate | Nodule |
| 14 | 2941507105 | Bradyrhizobium sp. i1.12.3 | Isolate | Nodule |
| 15 | 2941515067 | Bradyrhizobium sp. i1.14.1 | Isolate | Nodule |
| 16 | 2941523033 | Bradyrhizobium sp. i1.8.4 | Isolate | Nodule |
| 17 | 3005474847 | Bradyrhizobium sp. CCBAU 53421 | Isolate | Nodule |
| 18 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 19 | 3300003659 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 20 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 28 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 29 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 30 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 31 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 32 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 33 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 35 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 36 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 37 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 38 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 39 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 40 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 41 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 42 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 43 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 44 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 45 | 3300006942 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW | Metagenome | Nodule |
| 46 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 47 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 53 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300027357 | Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 76 | 3300027361 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 77 | 3300027363 | Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) | Metagenome | Nodule |
| 78 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 79 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 80 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 81 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 82 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 83 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 84 | 3300033442 | Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 | Metagenome | Nodule |
| 85 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 86 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 87 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 88 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 89 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 90 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 91 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 92 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 93 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 94 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 95 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 96 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 120 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 121 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 122 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 123 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 124 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 137 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 141 | 3300053163 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere | Metagenome | Endosphere |
| 142 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 91.71 |
| Metatranscriptomes | 0 |
| Isolates | 8.29 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.73 |
| Nodule | 8.74 |
| Rhizoplane | 3.28 |
| Rhizosphere | 80.33 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.92 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10012049 | 3300003203 | Bacteria | 3768 |
| 2 | JGI25404J52841_10000614 | 3300003659 | Bacteria | 5347 |
| 3 | JGI25404J52841_10010637 | 3300003659 | Bacteria | 1977 |
| 4 | Ga0070680_100018695 | 3300005336 | Bacteria | 5482 |
| 5 | Ga0070682_100000913 | 3300005337 | Bacteria | 17276 |
| 6 | Ga0070659_100031039 | 3300005366 | Bacteria | 4137 |
| 7 | Ga0070709_10009448 | 3300005434 | Bacteria | 5382 |
| 8 | Ga0070709_10029079 | 3300005434 | Bacteria | 3301 |
| 9 | Ga0070713_100024755 | 3300005436 | Bacteria | 4683 |
| 10 | Ga0070713_100152538 | 3300005436 | Bacteria | 2057 |
| 11 | Ga0070710_10020231 | 3300005437 | Bacteria | 3450 |
| 12 | Ga0070662_100045292 | 3300005457 | Bacteria | 3155 |
| 13 | Ga0070681_10004380 | 3300005458 | Bacteria | 13435 |
| 14 | Ga0070706_100151620 | 3300005467 | Bacteria | 2164 |
| 15 | Ga0070679_100025359 | 3300005530 | Bacteria | 5818 |
| 16 | Ga0070697_100000548 | 3300005536 | Bacteria | 28232 |
| 17 | Ga0068853_100002075 | 3300005539 | Bacteria | 14867 |
| 18 | Ga0070695_100009808 | 3300005545 | Bacteria | 5705 |
| 19 | Ga0070693_100004559 | 3300005547 | Bacteria | 6571 |
| 20 | Ga0068855_100031373 | 3300005563 | Bacteria | 6345 |
| 21 | Ga0068864_100086166 | 3300005618 | Bacteria | 2763 |
| 22 | Ga0081455_10024813 | 3300005937 | Bacteria | 5543 |
| 23 | Ga0081455_10027509 | 3300005937 | Bacteria | 5212 |
| 24 | Ga0081538_10027940 | 3300005981 | Bacteria | 3894 |
| 25 | Ga0081540_1000766 | 3300005983 | Bacteria | 29582 |
| 26 | Ga0081540_1000972 | 3300005983 | Bacteria | 25862 |
| 27 | Ga0081540_1001527 | 3300005983 | Bacteria | 19886 |
| 28 | Ga0081539_10000258 | 3300005985 | Bacteria | 122213 |
| 29 | Ga0081539_10003691 | 3300005985 | Bacteria | 18289 |
| 30 | Ga0075365_10078375 | 3300006038 | Bacteria | 2234 |
| 31 | Ga0075364_10045477 | 3300006051 | Bacteria | 2857 |
| 32 | Ga0070712_100007397 | 3300006175 | Bacteria | 6853 |
| 33 | Ga0070712_100030021 | 3300006175 | Bacteria | 3649 |
| 34 | Ga0075367_10009842 | 3300006178 | Bacteria | 5009 |
| 35 | Ga0075436_100000662 | 3300006914 | Bacteria | 22706 |
| 36 | Ga0075436_100000820 | 3300006914 | Bacteria | 20670 |
| 37 | Ga0099824_1003047 | 3300006942 | Bacteria | 24492 |
| 38 | Ga0075435_100038006 | 3300007076 | Bacteria | 3837 |
| 39 | Ga0105240_10021770 | 3300009093 | Bacteria | 8519 |
| 40 | Ga0105245_10031922 | 3300009098 | Bacteria | 4663 |
| 41 | Ga0105245_10196928 | 3300009098 | Bacteria | 1933 |
| 42 | Ga0105242_10026888 | 3300009176 | Bacteria | 4564 |
| 43 | Ga0105242_10080851 | 3300009176 | Bacteria | 2716 |
| 44 | Ga0105237_10025982 | 3300009545 | Bacteria | 5986 |
| 45 | Ga0105249_10000526 | 3300009553 | Bacteria | 35181 |
| 46 | Ga0099796_10001682 | 3300010159 | Bacteria | 4577 |
| 47 | Ga0157373_10066245 | 3300013100 | Bacteria | 2555 |
| 48 | Ga0157370_10011786 | 3300013104 | Bacteria | 9124 |
| 49 | Ga0157369_10044007 | 3300013105 | Bacteria | 4862 |
| 50 | Ga0157378_10075121 | 3300013297 | Bacteria | 3042 |
| 51 | Ga0157372_10002718 | 3300013307 | Bacteria | 19144 |
| 52 | Ga0163163_10030215 | 3300014325 | Bacteria | 5218 |
| 53 | Ga0157380_10034949 | 3300014326 | Bacteria | 3879 |
| 54 | Ga0163161_10076941 | 3300017792 | Bacteria | 2450 |
| 55 | Ga0207692_10047312 | 3300025898 | Bacteria | 2159 |
| 56 | Ga0207707_10004394 | 3300025912 | Bacteria | 12450 |
| 57 | Ga0207695_10057474 | 3300025913 | Bacteria | 4041 |
| 58 | Ga0207693_10005300 | 3300025915 | Bacteria | 10776 |
| 59 | Ga0207693_10038772 | 3300025915 | Bacteria | 3751 |
| 60 | Ga0207693_10051115 | 3300025915 | Bacteria | 3244 |
| 61 | Ga0207657_10057088 | 3300025919 | Bacteria | 3366 |
| 62 | Ga0207652_10033142 | 3300025921 | Bacteria | 4348 |
| 63 | Ga0207690_10006630 | 3300025932 | Bacteria | 6859 |
| 64 | Ga0207709_10057526 | 3300025935 | Bacteria | 2412 |
| 65 | Ga0207665_10034325 | 3300025939 | Bacteria | 3366 |
| 66 | Ga0207667_10030364 | 3300025949 | Bacteria | 5848 |
| 67 | Ga0207712_10002615 | 3300025961 | Bacteria | 11540 |
| 68 | Ga0207668_10079057 | 3300025972 | Bacteria | 2377 |
| 69 | Ga0207639_10064167 | 3300026041 | Bacteria | 2846 |
| 70 | Ga0207676_10056482 | 3300026095 | Bacteria | 3087 |
| 71 | Ga0209589_1000003 | 3300027357 | Bacteria | 629130 |
| 72 | Ga0209489_100003 | 3300027361 | Bacteria | 663105 |
| 73 | Ga0209700_100003 | 3300027363 | Bacteria | 663105 |
| 74 | Ga0265338_10009524 | 3300028800 | Bacteria | 11568 |
| 75 | Ga0265340_10004355 | 3300031247 | Bacteria | 7932 |
| 76 | Ga0265339_10000286 | 3300031249 | Bacteria | 40859 |
| 77 | Ga0265339_10002929 | 3300031249 | Bacteria | 12066 |
| 78 | Ga0265339_10003132 | 3300031249 | Bacteria | 11646 |
| 79 | Ga0265339_10041144 | 3300031249 | Bacteria | 2567 |
| 80 | Ga0307513_10029449 | 3300031456 | Bacteria | 6259 |
| 81 | Ga0265313_10000450 | 3300031595 | Bacteria | 43434 |
| 82 | Ga0265342_10000392 | 3300031712 | Bacteria | 48362 |
| 83 | Ga0315911_1000001 | 3300033442 | Bacteria | 1088602 |
| 84 | Ga0373939_0007789 | 3300035114 | Bacteria | 2609 |
| 85 | Ga0373945_0018007 | 3300035116 | Bacteria | 2399 |
| 86 | Ga0373943_0035456 | 3300035170 | Bacteria | 2384 |
| 87 | Ga0373943_0046003 | 3300035170 | Bacteria | 2128 |
| 88 | Ga0373946_0000317 | 3300035171 | Bacteria | 15643 |
| 89 | Ga0373935_0037338 | 3300035692 | Bacteria | 3040 |
| 90 | Ga0373927_0001762 | 3300035695 | Bacteria | 16152 |
| 91 | Ga0373927_0009252 | 3300035695 | Bacteria | 6608 |
| 92 | Ga0373947_0001344 | 3300035725 | Bacteria | 15110 |
| 93 | Ga0373947_0006398 | 3300035725 | Bacteria | 6846 |
| 94 | Ga0373925_0006921 | 3300037068 | Bacteria | 8294 |
| 95 | Ga0373925_0061563 | 3300037068 | Bacteria | 2819 |
| 96 | Ga0395898_0052583 | 3300037466 | Bacteria | 3980 |
| 97 | Ga0436365_0376836 | 3300039437 | Bacteria | 5003 |
| 98 | Ga0436365_0949571 | 3300039437 | Bacteria | 9218 |
| 99 | Ga0466958_0041189 | 3300045836 | Bacteria | 2778 |
| 100 | Ga0495603_0021958 | 3300046455 | Bacteria | 3864 |
| 101 | Ga0495629_0046175 | 3300046459 | Bacteria | 3055 |
| 102 | Ga0495629_0062974 | 3300046459 | Bacteria | 2590 |
| 103 | Ga0495653_0032461 | 3300046463 | Bacteria | 4145 |
| 104 | Ga0495653_0066257 | 3300046463 | Bacteria | 2717 |
| 105 | Ga0495582_0024868 | 3300046473 | Bacteria | 3280 |
| 106 | Ga0495662_0001401 | 3300046476 | Bacteria | 11959 |
| 107 | Ga0495662_0083240 | 3300046476 | Bacteria | 1557 |
| 108 | Ga0495664_0003453 | 3300046477 | Bacteria | 8597 |
| 109 | Ga0495664_0012075 | 3300046477 | Bacteria | 4884 |
| 110 | Ga0495584_0063747 | 3300046491 | Bacteria | 1853 |
| 111 | Ga0495618_0002683 | 3300046514 | Bacteria | 11336 |
| 112 | Ga0495618_0002983 | 3300046514 | Bacteria | 10697 |
| 113 | Ga0495630_0017242 | 3300046517 | Bacteria | 5289 |
| 114 | Ga0495630_0065133 | 3300046517 | Bacteria | 2738 |
| 115 | Ga0495630_0081656 | 3300046517 | Bacteria | 2439 |
| 116 | Ga0495652_0050971 | 3300046529 | Bacteria | 3537 |
| 117 | Ga0495640_0022012 | 3300046533 | Bacteria | 4667 |
| 118 | Ga0495645_0012325 | 3300046543 | Bacteria | 6021 |
| 119 | Ga0495634_0002668 | 3300046642 | Bacteria | 14667 |
| 120 | Ga0495634_0006876 | 3300046642 | Bacteria | 8601 |
| 121 | Ga0495635_0003861 | 3300046663 | Bacteria | 10413 |
| 122 | Ga0495646_0032492 | 3300046680 | Bacteria | 3248 |
| 123 | Ga0495647_0023243 | 3300046681 | Bacteria | 2247 |
| 124 | Ga0495613_0072698 | 3300046689 | Bacteria | 2507 |
| 125 | Ga0495624_0014908 | 3300046690 | Bacteria | 5263 |
| 126 | Ga0495581_0070639 | 3300047315 | Bacteria | 2020 |
| 127 | Ga0495674_0019712 | 3300047319 | Bacteria | 6255 |
| 128 | Ga0495674_0022331 | 3300047319 | Bacteria | 5837 |
| 129 | Ga0495676_0045790 | 3300047321 | Bacteria | 3557 |
| 130 | Ga0495684_0001238 | 3300047471 | Bacteria | 20564 |
| 131 | Ga0495684_0002294 | 3300047471 | Bacteria | 15313 |
| 132 | Ga0495684_0014739 | 3300047471 | Bacteria | 6019 |
| 133 | Ga0495593_0005942 | 3300047673 | Bacteria | 7193 |
| 134 | Ga0496105_0017911 | 3300048908 | Bacteria | 5684 |
| 135 | Ga0496106_0067122 | 3300048909 | Bacteria | 2734 |
| 136 | Ga0496106_0160681 | 3300048909 | Bacteria | 1777 |
| 137 | Ga0496109_0079070 | 3300048912 | Bacteria | 3029 |
| 138 | Ga0496112_0053986 | 3300048915 | Bacteria | 3948 |
| 139 | Ga0496126_0034224 | 3300048929 | Bacteria | 4773 |
| 140 | Ga0501034_0045018 | 3300049571 | Bacteria | 4461 |
| 141 | Ga0501038_0012720 | 3300049574 | Bacteria | 7688 |
| 142 | Ga0501038_0196995 | 3300049574 | Bacteria | 1619 |
| 143 | Ga0501043_0110653 | 3300049579 | Bacteria | 2157 |
| 144 | Ga0501046_0041010 | 3300049580 | Bacteria | 3696 |
| 145 | Ga0501047_0008589 | 3300049581 | Bacteria | 9642 |
| 146 | Ga0501070_0076622 | 3300049586 | Bacteria | 2768 |
| 147 | Ga0501073_0061536 | 3300049589 | Bacteria | 2619 |
| 148 | Ga0501074_0034712 | 3300049590 | Bacteria | 3656 |
| 149 | Ga0501080_0099093 | 3300049742 | Bacteria | 2704 |
| 150 | Ga0501044_0039901 | 3300049823 | Bacteria | 4895 |
| 151 | Ga0501044_0100623 | 3300049823 | Bacteria | 2909 |
| 152 | Ga0501044_0101524 | 3300049823 | Bacteria | 2894 |
| 153 | nmdc:mga06r32_117827_c1 | 3300050510 | Bacteria | 2617 |
| 154 | nmdc:mga0n895_137976_c1 | 3300050512 | Bacteria | 2466 |
| 155 | nmdc:mga08x19_3724_c1 | 3300050514 | Bacteria | 9077 |
| 156 | nmdc:mga08x19_4_c1 | 3300050514 | Bacteria | 335979 |
| 157 | Ga0495601_0010482 | 3300053077 | Bacteria | 5517 |
| 158 | Ga0495601_0059546 | 3300053077 | Bacteria | 2422 |
| 159 | Ga0495612_0003327 | 3300053078 | Bacteria | 6663 |
| 160 | Ga0495612_0004175 | 3300053078 | Bacteria | 5989 |
| 161 | Ga0495619_0003520 | 3300053085 | Bacteria | 10097 |
| 162 | Ga0495619_0017574 | 3300053085 | Bacteria | 4529 |
| 163 | Ga0495619_0026342 | 3300053085 | Bacteria | 3739 |
| 164 | Ga0500643_020726 | 3300053087 | Bacteria | 2142 |
| 165 | Ga0500639_049504 | 3300053163 | Bacteria | 2192 |
| 166 | Ga0501082_0115272 | 3300060353 | Bacteria | 2327 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046476 | Ga0495662_0083240 | Ga0495662_0083240_14_1465 | 454 |
| 2 | 3300053087 | Ga0500643_020726 | Ga0500643_020726_696_2123 | 454 |
| 3 | 3300049574 | Ga0501038_0196995 | Ga0501038_0196995_161_1600 | 458 |
| 4 | 3300046680 | Ga0495646_0032492 | Ga0495646_0032492_1514_2968 | 465 |
| 5 | 3300049580 | Ga0501046_0041010 | Ga0501046_0041010_464_1987 | 471 |
| 6 | 3300050512 | nmdc:mga0n895_137976_c1 | nmdc:mga0n895_137976_c1_919_2445 | 479 |
| 7 | 3300049823 | Ga0501044_0100623 | Ga0501044_0100623_152_1828 | 504 |
| 8 | 3300035114 | Ga0373939_0007789 | Ga0373939_0007789_827_2554 | 511 |
| 9 | 3300006175 | Ga0070712_100030021 | Ga0070712_1000300212 | 512 |
| 10 | 3300039437 | Ga0436365_0949571 | Ga0436365_0949571_5193_6920 | 513 |
| 11 | 3300049571 | Ga0501034_0045018 | Ga0501034_0045018_1040_2716 | 515 |
| 12 | 3300048909 | Ga0496106_0160681 | Ga0496106_0160681_33_1652 | 518 |
| 13 | 3300009176 | Ga0105242_10026888 | Ga0105242_100268884 | 519 |
| 14 | 3300014326 | Ga0157380_10034949 | Ga0157380_100349491 | 519 |
| 15 | 3300017792 | Ga0163161_10076941 | Ga0163161_100769412 | 519 |
| 16 | 3300025935 | Ga0207709_10057526 | Ga0207709_100575262 | 519 |
| 17 | 3300025972 | Ga0207668_10079057 | Ga0207668_100790571 | 519 |
| 18 | 3300006175 | Ga0070712_100007397 | Ga0070712_1000073976 | 524 |
| 19 | 3300025915 | Ga0207693_10005300 | Ga0207693_1000530011 | 524 |
| 20 | 3300049586 | Ga0501070_0076622 | Ga0501070_0076622_608_2272 | 525 |
| 21 | 3300049589 | Ga0501073_0061536 | Ga0501073_0061536_103_1767 | 525 |
| 22 | 3300049590 | Ga0501074_0034712 | Ga0501074_0034712_1003_2667 | 525 |
| 23 | 3300049742 | Ga0501080_0099093 | Ga0501080_0099093_952_2616 | 525 |
| 24 | 3300049823 | Ga0501044_0101524 | Ga0501044_0101524_466_2130 | 525 |
| 25 | 3300031456 | Ga0307513_10029449 | Ga0307513_100294495 | 527 |
| 26 | iso_pu_bacteria | 2935630451 | 2935633564 | 528 |
| 27 | iso_pu_bacteria | 2941507105 | 2941510455 | 528 |
| 28 | iso_pu_bacteria | 2941515067 | 2941517808 | 528 |
| 29 | iso_pu_bacteria | 2941523033 | 2941525824 | 528 |
| 30 | iso_pu_bacteria | 2513237096 | 2513654260 | 529 |
| 31 | iso_pu_bacteria | 2667528175 | 2671117559 | 529 |
| 32 | iso_pu_bacteria | 2791355197 | 2793068168 | 529 |
| 33 | iso_pu_bacteria | 2885374607 | 2885380227 | 529 |
| 34 | iso_pu_bacteria | 2903748898 | 2903757827 | 529 |
| 35 | iso_pu_bacteria | 2904690495 | 2904696182 | 529 |
| 36 | iso_pu_bacteria | 2906610324 | 2906618075 | 529 |
| 37 | iso_pu_bacteria | 2906635258 | 2906639404 | 529 |
| 38 | iso_pu_bacteria | 2906660503 | 2906661558 | 529 |
| 39 | iso_pu_bacteria | 2908739725 | 2908743296 | 529 |
| 40 | iso_pu_bacteria | 2908756301 | 2908760815 | 529 |
| 41 | iso_pu_bacteria | 2922425934 | 2922429998 | 529 |
| 42 | iso_pu_bacteria | 3005474847 | 3005479736 | 529 |
| 43 | 3300009093 | Ga0105240_10021770 | Ga0105240_100217702 | 530 |
| 44 | 3300009553 | Ga0105249_10000526 | Ga0105249_1000052615 | 530 |
| 45 | 3300013105 | Ga0157369_10044007 | Ga0157369_100440073 | 530 |
| 46 | 3300025913 | Ga0207695_10057474 | Ga0207695_100574742 | 530 |
| 47 | 3300037466 | Ga0395898_0052583 | Ga0395898_0052583_33_1775 | 530 |
| 48 | 3300013100 | Ga0157373_10066245 | Ga0157373_100662452 | 531 |
| 49 | 3300003659 | JGI25404J52841_10000614 | JGI25404J52841_100006145 | 532 |
| 50 | 3300035695 | Ga0373927_0009252 | Ga0373927_0009252_2693_4438 | 532 |
| 51 | 3300037068 | Ga0373925_0061563 | Ga0373925_0061563_174_1919 | 532 |
| 52 | 3300046455 | Ga0495603_0021958 | Ga0495603_0021958_72_1817 | 532 |
| 53 | 3300006942 | Ga0099824_1003047 | Ga0099824_10030473 | 533 |
| 54 | 3300027357 | Ga0209589_1000003 | Ga0209589_1000003378 | 533 |
| 55 | 3300027361 | Ga0209489_100003 | Ga0209489_100003429 | 533 |
| 56 | 3300027363 | Ga0209700_100003 | Ga0209700_100003429 | 533 |
| 57 | 3300033442 | Ga0315911_1000001 | Ga0315911_1000001864 | 533 |
| 58 | 3300049581 | Ga0501047_0008589 | Ga0501047_0008589_5117_6835 | 535 |
| 59 | 3300035170 | Ga0373943_0035456 | Ga0373943_0035456_322_1989 | 536 |
| 60 | 3300046459 | Ga0495629_0046175 | Ga0495629_0046175_308_1975 | 536 |
| 61 | 3300046463 | Ga0495653_0032461 | Ga0495653_0032461_1701_3368 | 536 |
| 62 | 3300046477 | Ga0495664_0012075 | Ga0495664_0012075_2190_3857 | 536 |
| 63 | 3300046514 | Ga0495618_0002983 | Ga0495618_0002983_5242_6909 | 536 |
| 64 | 3300046517 | Ga0495630_0065133 | Ga0495630_0065133_943_2610 | 536 |
| 65 | 3300047319 | Ga0495674_0022331 | Ga0495674_0022331_2088_3755 | 536 |
| 66 | 3300047471 | Ga0495684_0014739 | Ga0495684_0014739_2425_4092 | 536 |
| 67 | 3300053078 | Ga0495612_0003327 | Ga0495612_0003327_2769_4436 | 536 |
| 68 | 3300053085 | Ga0495619_0026342 | Ga0495619_0026342_531_2198 | 536 |
| 69 | 3300005536 | Ga0070697_100000548 | Ga0070697_1000005487 | 538 |
| 70 | 3300005545 | Ga0070695_100009808 | Ga0070695_1000098085 | 538 |
| 71 | 3300006914 | Ga0075436_100000820 | Ga0075436_10000082010 | 538 |
| 72 | 3300050514 | nmdc:mga08x19_4_c1 | nmdc:mga08x19_4_c1_198336_200033 | 538 |
| 73 | 3300005985 | Ga0081539_10003691 | Ga0081539_100036912 | 539 |
| 74 | 3300005436 | Ga0070713_100152538 | Ga0070713_1001525382 | 542 |
| 75 | 3300028800 | Ga0265338_10009524 | Ga0265338_100095243 | 544 |
| 76 | 3300031249 | Ga0265339_10000286 | Ga0265339_100002869 | 544 |
| 77 | 3300031595 | Ga0265313_10000450 | Ga0265313_1000045030 | 544 |
| 78 | 3300025915 | Ga0207693_10038772 | Ga0207693_100387722 | 545 |
| 79 | 3300046642 | Ga0495634_0002668 | Ga0495634_0002668_203_1918 | 545 |
| 80 | 3300005336 | Ga0070680_100018695 | Ga0070680_1000186954 | 546 |
| 81 | 3300005337 | Ga0070682_100000913 | Ga0070682_10000091313 | 546 |
| 82 | 3300005366 | Ga0070659_100031039 | Ga0070659_1000310393 | 546 |
| 83 | 3300005458 | Ga0070681_10004380 | Ga0070681_100043801 | 546 |
| 84 | 3300005530 | Ga0070679_100025359 | Ga0070679_1000253596 | 546 |
| 85 | 3300005539 | Ga0068853_100002075 | Ga0068853_10000207513 | 546 |
| 86 | 3300005547 | Ga0070693_100004559 | Ga0070693_1000045594 | 546 |
| 87 | 3300005563 | Ga0068855_100031373 | Ga0068855_1000313734 | 546 |
| 88 | 3300013104 | Ga0157370_10011786 | Ga0157370_100117867 | 546 |
| 89 | 3300013307 | Ga0157372_10002718 | Ga0157372_100027185 | 546 |
| 90 | 3300025912 | Ga0207707_10004394 | Ga0207707_100043945 | 546 |
| 91 | 3300025919 | Ga0207657_10057088 | Ga0207657_100570883 | 546 |
| 92 | 3300025921 | Ga0207652_10033142 | Ga0207652_100331422 | 546 |
| 93 | 3300025932 | Ga0207690_10006630 | Ga0207690_100066303 | 546 |
| 94 | 3300025949 | Ga0207667_10030364 | Ga0207667_100303644 | 546 |
| 95 | 3300025961 | Ga0207712_10002615 | Ga0207712_100026155 | 546 |
| 96 | 3300026041 | Ga0207639_10064167 | Ga0207639_100641671 | 546 |
| 97 | 3300049574 | Ga0501038_0012720 | Ga0501038_0012720_298_1995 | 546 |
| 98 | 3300049579 | Ga0501043_0110653 | Ga0501043_0110653_190_1887 | 546 |
| 99 | 3300005618 | Ga0068864_100086166 | Ga0068864_1000861662 | 547 |
| 100 | 3300009098 | Ga0105245_10031922 | Ga0105245_100319221 | 547 |
| 101 | 3300009176 | Ga0105242_10080851 | Ga0105242_100808512 | 547 |
| 102 | 3300026095 | Ga0207676_10056482 | Ga0207676_100564822 | 547 |
| 103 | 3300035116 | Ga0373945_0018007 | Ga0373945_0018007_309_2024 | 547 |
| 104 | 3300035170 | Ga0373943_0046003 | Ga0373943_0046003_69_1784 | 547 |
| 105 | 3300035171 | Ga0373946_0000317 | Ga0373946_0000317_2332_4047 | 547 |
| 106 | 3300035695 | Ga0373927_0001762 | Ga0373927_0001762_10944_12659 | 547 |
| 107 | 3300035725 | Ga0373947_0001344 | Ga0373947_0001344_4884_6599 | 547 |
| 108 | 3300035725 | Ga0373947_0006398 | Ga0373947_0006398_3314_5029 | 547 |
| 109 | 3300037068 | Ga0373925_0006921 | Ga0373925_0006921_2687_4402 | 547 |
| 110 | 3300046459 | Ga0495629_0062974 | Ga0495629_0062974_329_2044 | 547 |
| 111 | 3300046463 | Ga0495653_0066257 | Ga0495653_0066257_666_2381 | 547 |
| 112 | 3300046476 | Ga0495662_0001401 | Ga0495662_0001401_6949_8664 | 547 |
| 113 | 3300046477 | Ga0495664_0003453 | Ga0495664_0003453_5998_7713 | 547 |
| 114 | 3300046514 | Ga0495618_0002683 | Ga0495618_0002683_341_2056 | 547 |
| 115 | 3300046517 | Ga0495630_0017242 | Ga0495630_0017242_2794_4509 | 547 |
| 116 | 3300046517 | Ga0495630_0081656 | Ga0495630_0081656_691_2406 | 547 |
| 117 | 3300046529 | Ga0495652_0050971 | Ga0495652_0050971_182_1897 | 547 |
| 118 | 3300046533 | Ga0495640_0022012 | Ga0495640_0022012_35_1750 | 547 |
| 119 | 3300046543 | Ga0495645_0012325 | Ga0495645_0012325_3728_5443 | 547 |
| 120 | 3300046642 | Ga0495634_0006876 | Ga0495634_0006876_4789_6504 | 547 |
| 121 | 3300046663 | Ga0495635_0003861 | Ga0495635_0003861_4871_6586 | 547 |
| 122 | 3300046681 | Ga0495647_0023243 | Ga0495647_0023243_456_2171 | 547 |
| 123 | 3300046690 | Ga0495624_0014908 | Ga0495624_0014908_336_2051 | 547 |
| 124 | 3300047315 | Ga0495581_0070639 | Ga0495581_0070639_64_1779 | 547 |
| 125 | 3300047319 | Ga0495674_0019712 | Ga0495674_0019712_28_1743 | 547 |
| 126 | 3300047321 | Ga0495676_0045790 | Ga0495676_0045790_1494_3209 | 547 |
| 127 | 3300047471 | Ga0495684_0001238 | Ga0495684_0001238_9153_10868 | 547 |
| 128 | 3300047471 | Ga0495684_0002294 | Ga0495684_0002294_12730_14445 | 547 |
| 129 | 3300047673 | Ga0495593_0005942 | Ga0495593_0005942_154_1869 | 547 |
| 130 | 3300053077 | Ga0495601_0010482 | Ga0495601_0010482_2918_4633 | 547 |
| 131 | 3300053078 | Ga0495612_0004175 | Ga0495612_0004175_1363_3078 | 547 |
| 132 | 3300053085 | Ga0495619_0003520 | Ga0495619_0003520_1873_3588 | 547 |
| 133 | 3300049823 | Ga0501044_0039901 | Ga0501044_0039901_2353_4149 | 548 |
| 134 | 3300060353 | Ga0501082_0115272 | Ga0501082_0115272_318_2114 | 548 |
| 135 | 3300005457 | Ga0070662_100045292 | Ga0070662_1000452922 | 549 |
| 136 | 3300013297 | Ga0157378_10075121 | Ga0157378_100751213 | 549 |
| 137 | 3300035692 | Ga0373935_0037338 | Ga0373935_0037338_333_2069 | 549 |
| 138 | 3300039437 | Ga0436365_0376836 | Ga0436365_0376836_455_2182 | 549 |
| 139 | 3300046689 | Ga0495613_0072698 | Ga0495613_0072698_548_2284 | 549 |
| 140 | 3300048915 | Ga0496112_0053986 | Ga0496112_0053986_1134_2861 | 549 |
| 141 | 3300053077 | Ga0495601_0059546 | Ga0495601_0059546_612_2348 | 549 |
| 142 | 3300053085 | Ga0495619_0017574 | Ga0495619_0017574_527_2254 | 549 |
| 143 | 3300005983 | Ga0081540_1000766 | Ga0081540_10007668 | 550 |
| 144 | 3300006038 | Ga0075365_10078375 | Ga0075365_100783752 | 550 |
| 145 | 3300046473 | Ga0495582_0024868 | Ga0495582_0024868_1313_3031 | 551 |
| 146 | 3300046491 | Ga0495584_0063747 | Ga0495584_0063747_35_1753 | 551 |
| 147 | 3300053163 | Ga0500639_049504 | Ga0500639_049504_392_2143 | 551 |
| 148 | 3300003659 | JGI25404J52841_10010637 | JGI25404J52841_100106371 | 552 |
| 149 | 3300005434 | Ga0070709_10009448 | Ga0070709_100094482 | 552 |
| 150 | 3300005434 | Ga0070709_10029079 | Ga0070709_100290792 | 552 |
| 151 | 3300005437 | Ga0070710_10020231 | Ga0070710_100202312 | 552 |
| 152 | 3300005467 | Ga0070706_100151620 | Ga0070706_1001516201 | 552 |
| 153 | 3300005937 | Ga0081455_10024813 | Ga0081455_100248133 | 552 |
| 154 | 3300005937 | Ga0081455_10027509 | Ga0081455_100275093 | 552 |
| 155 | 3300005983 | Ga0081540_1000972 | Ga0081540_100097214 | 552 |
| 156 | 3300005983 | Ga0081540_1001527 | Ga0081540_10015273 | 552 |
| 157 | 3300005985 | Ga0081539_10000258 | Ga0081539_1000025855 | 552 |
| 158 | 3300009098 | Ga0105245_10196928 | Ga0105245_101969281 | 552 |
| 159 | 3300014325 | Ga0163163_10030215 | Ga0163163_100302155 | 552 |
| 160 | 3300025898 | Ga0207692_10047312 | Ga0207692_100473122 | 552 |
| 161 | 3300025915 | Ga0207693_10051115 | Ga0207693_100511152 | 552 |
| 162 | 3300025939 | Ga0207665_10034325 | Ga0207665_100343251 | 552 |
| 163 | 3300031249 | Ga0265339_10002929 | Ga0265339_100029295 | 552 |
| 164 | 3300045836 | Ga0466958_0041189 | Ga0466958_0041189_765_2486 | 552 |
| 165 | 3300048908 | Ga0496105_0017911 | Ga0496105_0017911_2737_4458 | 552 |
| 166 | 3300048909 | Ga0496106_0067122 | Ga0496106_0067122_691_2412 | 552 |
| 167 | 3300048912 | Ga0496109_0079070 | Ga0496109_0079070_741_2462 | 552 |
| 168 | 3300048929 | Ga0496126_0034224 | Ga0496126_0034224_371_2146 | 552 |
| 169 | 3300003203 | JGI25406J46586_10012049 | JGI25406J46586_100120492 | 553 |
| 170 | 3300005436 | Ga0070713_100024755 | Ga0070713_1000247551 | 553 |
| 171 | 3300005981 | Ga0081538_10027940 | Ga0081538_100279404 | 553 |
| 172 | 3300006051 | Ga0075364_10045477 | Ga0075364_100454771 | 553 |
| 173 | 3300006178 | Ga0075367_10009842 | Ga0075367_100098423 | 553 |
| 174 | 3300006914 | Ga0075436_100000662 | Ga0075436_1000006622 | 553 |
| 175 | 3300007076 | Ga0075435_100038006 | Ga0075435_1000380062 | 553 |
| 176 | 3300009545 | Ga0105237_10025982 | Ga0105237_100259821 | 553 |
| 177 | 3300010159 | Ga0099796_10001682 | Ga0099796_100016822 | 553 |
| 178 | 3300031247 | Ga0265340_10004355 | Ga0265340_100043554 | 553 |
| 179 | 3300031249 | Ga0265339_10003132 | Ga0265339_100031324 | 553 |
| 180 | 3300031249 | Ga0265339_10041144 | Ga0265339_100411442 | 553 |
| 181 | 3300031712 | Ga0265342_10000392 | Ga0265342_100003927 | 553 |
| 182 | 3300050510 | nmdc:mga06r32_117827_c1 | nmdc:mga06r32_117827_c1_196_1947 | 553 |
| 183 | 3300050514 | nmdc:mga08x19_3724_c1 | nmdc:mga08x19_3724_c1_6236_7963 | 553 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5ezm-assembly1.cif.gz_A | crystal structure of arnt from cupriavidus metallidurans in the apo state | 0.7437 | 33 | 544 |
| 5ezm-assembly1.cif.gz_A | crystal structure of arnt from cupriavidus metallidurans in the apo state | 0.7113 | 33 | 544 |
| 5f15-assembly1.cif.gz_A | crystal structure of arnt from cupriavidus metallidurans bound to undecaprenyl phosphate | 0.7094 | 33 | 544 |
| 5f15-assembly1.cif.gz_A | crystal structure of arnt from cupriavidus metallidurans bound to undecaprenyl phosphate | 0.6744 | 33 | 544 |
| 6p25-assembly1.cif.gz_A | structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt2 complex bound to the sugar donor and a peptide acceptor | 0.6189 | 19 | 269 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O06152_111_270_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.6807 | 92 | 258 | 1.20.1250.20 |
| af_O06152_111_270_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.6665 | 92 | 258 | 1.20.1250.20 |
| af_Q57857_254_394_3.30.70.2160 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.5362 | 474 | 548 | 3.30.70.2160 |
| af_A0A1D6GPI2_538_640_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.5357 | 460 | 548 | 3.40.50.150 |
| 5yacA03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.5178 | 447 | 550 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-D7A769-F1-model_v4 | Glycosyl transferase family 39 | 0.937 | 27 | 552 |
GO:0005886
GO:0009103 GO:0010041 GO:0016763 |
| AF-A0A327MCB7-F1-model_v4 | Glycosyltransferase family 39 protein | 0.9343 | 29 | 550 |
GO:0005886
GO:0009103 GO:0010041 GO:0016763 |
| AF-A0A850PK32-F1-model_v4 | Glycosyltransferase family 39 protein | 0.9334 | 32 | 551 |
GO:0000030
GO:0005886 GO:0006493 GO:0009103 GO:0010041 GO:0016763 |
| AF-A0A560HI20-F1-model_v4 | 4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase | 0.9266 | 31 | 550 |
GO:0000030
GO:0005886 GO:0006493 GO:0009103 GO:0010041 GO:0016763 |
| AF-A0A7Y8MQJ9-F1-model_v4 | Glycosyltransferase family 39 protein | 0.9226 | 28 | 551 |
GO:0000030
GO:0005886 GO:0006493 GO:0009103 GO:0010041 GO:0016763 |
Predicted Structure (AlphaFold2)
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