F282722

General Info

Members Datasets Scaffolds Average Seq Length
184 143 184 222

Family's Representative Sequence

Representative Sequence 3300025986|Ga0207658_10253622|Ga0207658_102536222
Length 238
Sequence MPRGGQIRDTRRRRTVTDNYEDLRQWRLPRGRHGLPRELVERSQRERLLAAVVRVTVANGYESTTVGDILGEAGVGRESFYELFDDKLDCMLAAHKILADDLEERVRAAYLDEGPWPERARHALGTILDWFAADPGTARFFLVELSTVGPAFRATFKDEYSRFTELLDEGLGEDGPDPELSRATQLAVGAIMARIYEEVVLGRAAELPRLLPELTYGFLVPFVGEEAARREQELAQAG

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
82 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
83 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
90 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
91 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
92 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
93 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
94 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
95 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
96 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
115 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
141 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 1.09
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.09
Nodule 0
Rhizoplane 8.7
Rhizosphere 83.7
Stem 0
Stem Tuber 0
Unclassified 6.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000416 3300001979 Bacteria 18213
2 JGI25404J52841_10012147 3300003659 Bacteria 1862
3 Ga0070658_10123859 3300005327 Bacteria 2150
4 Ga0070683_100002179 3300005329 Bacteria 15491
5 Ga0070683_100037511 3300005329 Bacteria 4437
6 Ga0070690_100084021 3300005330 Bacteria 2086
7 Ga0070666_10029130 3300005335 Bacteria 3628
8 Ga0070682_100000080 3300005337 Bacteria 85683
9 Ga0070682_100091588 3300005337 Bacteria 1990
10 Ga0070682_100322685 3300005337 Unclassified 1141
11 Ga0070692_10032943 3300005345 Bacteria 2609
12 Ga0070675_100000192 3300005354 Bacteria 38351
13 Ga0070688_100000012 3300005365 Bacteria 79406
14 Ga0070688_100012815 3300005365 Bacteria 4708
15 Ga0070688_100016910 3300005365 Bacteria 4177
16 Ga0070659_100024609 3300005366 Bacteria 4616
17 Ga0070667_100100317 3300005367 Bacteria 2500
18 Ga0070667_100290265 3300005367 Bacteria 1471
19 Ga0070713_100000933 3300005436 Bacteria 18678
20 Ga0070713_100049950 3300005436 Bacteria 3453
21 Ga0070711_100333536 3300005439 Unclassified 1215
22 Ga0070700_100232618 3300005441 Unclassified 1312
23 Ga0070663_100025972 3300005455 Bacteria 3961
24 Ga0070685_10000018 3300005466 Bacteria 110132
25 Ga0070685_10004378 3300005466 Bacteria 7129
26 Ga0070685_10119252 3300005466 Bacteria 1636
27 Ga0070679_100035317 3300005530 Bacteria 4959
28 Ga0070684_100037690 3300005535 Bacteria 4149
29 Ga0070684_100073640 3300005535 Bacteria 3010
30 Ga0068853_100161693 3300005539 Bacteria 2021
31 Ga0070686_100038418 3300005544 Bacteria 2976
32 Ga0070665_100005634 3300005548 Bacteria 12874
33 Ga0070665_100728557 3300005548 Bacteria 1005
34 Ga0068855_100161358 3300005563 Bacteria 2544
35 Ga0068857_100542163 3300005577 Bacteria 1095
36 Ga0068854_100001007 3300005578 Bacteria 16940
37 Ga0068856_100002319 3300005614 Bacteria 19601
38 Ga0068856_100034034 3300005614 Bacteria 4990
39 Ga0068852_100000012 3300005616 Bacteria 140734
40 Ga0068852_100058553 3300005616 Bacteria 3338
41 Ga0068851_10008723 3300005834 Bacteria 4696
42 Ga0068870_10119655 3300005840 Unclassified 1515
43 Ga0081455_10245019 3300005937 Bacteria 1315
44 Ga0081540_1000006 3300005983 Bacteria 208724
45 Ga0081539_10001003 3300005985 Bacteria 52435
46 Ga0070712_100002610 3300006175 Bacteria 11127
47 Ga0068865_100000101 3300006881 Bacteria 44302
48 Ga0105245_10000283 3300009098 Bacteria 48302
49 Ga0105245_10044235 3300009098 Bacteria 3974
50 Ga0105247_10004151 3300009101 Bacteria 9298
51 Ga0105243_10013917 3300009148 Bacteria 6088
52 Ga0105242_10000357 3300009176 Bacteria 36537
53 Ga0105248_10000032 3300009177 Bacteria 201114
54 Ga0105238_10521795 3300009551 Bacteria 1190
55 Ga0105239_10093565 3300010375 Bacteria 3319
56 Ga0157371_10003923 3300013102 Bacteria 13232
57 Ga0157369_10000142 3300013105 Bacteria 101760
58 Ga0157378_10003055 3300013297 Bacteria 14877
59 Ga0157378_10055810 3300013297 Bacteria 3519
60 Ga0157378_10131082 3300013297 Bacteria 2321
61 Ga0157372_10002742 3300013307 Bacteria 19035
62 Ga0157375_10002378 3300013308 Bacteria 16278
63 Ga0157380_10008530 3300014326 Bacteria 7324
64 Ga0157376_10005648 3300014969 Bacteria 8756
65 Ga0163161_10036546 3300017792 Bacteria 3517
66 Ga0206356_11027955 3300020070 Bacteria 1168
67 Ga0206353_10171651 3300020082 Bacteria 1783
68 Ga0207656_10045712 3300025321 Bacteria 1875
69 Ga0207710_10000580 3300025900 Bacteria 21659
70 Ga0207710_10156243 3300025900 Bacteria 1109
71 Ga0207680_10002472 3300025903 Bacteria 8628
72 Ga0207680_10361518 3300025903 Bacteria 1021
73 Ga0207685_10163478 3300025905 Bacteria 1018
74 Ga0207643_10131750 3300025908 Unclassified 1488
75 Ga0207707_10374102 3300025912 Unclassified 1225
76 Ga0207671_10255612 3300025914 Bacteria 1378
77 Ga0207693_10020740 3300025915 Bacteria 5227
78 Ga0207663_10264337 3300025916 Bacteria 1272
79 Ga0207660_10254822 3300025917 Bacteria 1386
80 Ga0207652_10029627 3300025921 Bacteria 4579
81 Ga0207659_10000020 3300025926 Bacteria 151552
82 Ga0207687_10000007 3300025927 Bacteria 604185
83 Ga0207687_10004304 3300025927 Bacteria 9506
84 Ga0207700_10000070 3300025928 Bacteria 62833
85 Ga0207686_10001286 3300025934 Bacteria 14405
86 Ga0207704_10000025 3300025938 Bacteria 135523
87 Ga0207711_10000020 3300025941 Bacteria 363325
88 Ga0207661_10002561 3300025944 Bacteria 12511
89 Ga0207661_10010893 3300025944 Bacteria 6563
90 Ga0207658_10082719 3300025986 Bacteria 2466
91 Ga0207658_10253622 3300025986 Bacteria 1496
92 Ga0207677_10005697 3300026023 Bacteria 6775
93 Ga0207639_10534503 3300026041 Bacteria 1075
94 Ga0207678_10049330 3300026067 Bacteria 3638
95 Ga0207702_10000016 3300026078 Bacteria 226633
96 Ga0207702_10019788 3300026078 Bacteria 5573
97 Ga0207674_10544685 3300026116 Bacteria 1121
98 Ga0207675_100381396 3300026118 Bacteria 1386
99 Ga0207683_10038479 3300026121 Bacteria 4169
100 Ga0207698_10000012 3300026142 Bacteria 260061
101 Ga0207698_10004988 3300026142 Bacteria 8138
102 Ga0268266_10002478 3300028379 Bacteria 19728
103 Ga0268266_10065925 3300028379 Bacteria 3131
104 Ga0268266_10318215 3300028379 Bacteria 1456
105 Ga0307415_100003289 3300032126 Bacteria 8212
106 Ga0316582_0178987 3300036647 Bacteria 1442
107 Ga0451807_0988646 3300041486 Bacteria 1111
108 Ga0451849_0770733 3300041505 Bacteria 1220
109 Ga0451849_0810359 3300041505 Bacteria 1396
110 Ga0466957_0003132 3300044842 Bacteria 9006
111 Ga0466958_0186809 3300045836 Bacteria 1316
112 Ga0466967_0000046 3300045976 Bacteria 43911
113 Ga0495629_0024568 3300046459 Bacteria 4291
114 Ga0495629_0029573 3300046459 Bacteria 3884
115 Ga0495638_0084209 3300046460 Unclassified 1925
116 Ga0495662_0004612 3300046476 Bacteria 6909
117 Ga0495606_0000211 3300046507 Bacteria 103386
118 Ga0495608_0000031 3300046511 Bacteria 145255
119 Ga0495620_0070213 3300046515 Bacteria 1435
120 Ga0495628_0000323 3300046516 Bacteria 43212
121 Ga0495630_0000018 3300046517 Bacteria 186064
122 Ga0495640_0106877 3300046533 Unclassified 1832
123 Ga0495667_0000075 3300046559 Bacteria 73540
124 Ga0495625_0000122 3300046660 Bacteria 121146
125 Ga0495588_0000198 3300046674 Bacteria 60956
126 Ga0495657_0000024 3300046675 Bacteria 145255
127 Ga0495599_0206659 3300046678 Unclassified 1205
128 Ga0495647_0000437 3300046681 Bacteria 11967
129 Ga0495658_0019737 3300046683 Bacteria 3523
130 Ga0495669_0147093 3300046684 Bacteria 1114
131 Ga0495613_0000352 3300046689 Bacteria 40662
132 Ga0495624_0000037 3300046690 Bacteria 83796
133 Ga0495600_0024991 3300046809 Bacteria 3848
134 Ga0495604_0000073 3300047317 Bacteria 86844
135 Ga0495674_0000042 3300047319 Bacteria 94820
136 Ga0495672_0111018 3300047320 Bacteria 1471
137 Ga0495676_0229350 3300047321 Bacteria 1276
138 Ga0495680_0003091 3300047322 Bacteria 16592
139 Ga0495675_0000209 3300047444 Bacteria 42691
140 Ga0495686_0060283 3300047472 Bacteria 2359
141 Ga0495593_0033158 3300047673 Bacteria 2814
142 Ga0495602_0000021 3300048088 Bacteria 168585
143 Ga0495602_0273229 3300048088 Bacteria 1248
144 Ga0496103_0063054 3300048906 Bacteria 2308
145 Ga0496104_0000002 3300048907 Bacteria 686017
146 Ga0496104_0031192 3300048907 Bacteria 4956
147 Ga0496105_0000001 3300048908 Bacteria 1328178
148 Ga0496108_0000150 3300048911 Bacteria 67068
149 Ga0496108_0057002 3300048911 Bacteria 3283
150 Ga0496109_0000007 3300048912 Bacteria 247554
151 Ga0496109_0000028 3300048912 Bacteria 168138
152 Ga0496110_0000033 3300048913 Bacteria 65539
153 Ga0496110_0110931 3300048913 Unclassified 2465
154 Ga0496111_0000125 3300048914 Bacteria 33642
155 Ga0496111_0179597 3300048914 Unclassified 1573
156 Ga0496111_0257474 3300048914 Bacteria 1295
157 Ga0496112_0001891 3300048915 Bacteria 16517
158 Ga0496113_0000007 3300048916 Bacteria 95884
159 Ga0496116_0000819 3300048919 Bacteria 39388
160 Ga0496117_0007580 3300048920 Bacteria 10557
161 Ga0496118_0002138 3300048921 Bacteria 27578
162 Ga0496118_0061977 3300048921 Bacteria 2765
163 Ga0496119_0004262 3300048922 Bacteria 14330
164 Ga0496119_0005629 3300048922 Bacteria 11911
165 Ga0496120_0001229 3300048923 Bacteria 32395
166 Ga0496121_0026538 3300048924 Bacteria 5453
167 Ga0496121_0109811 3300048924 Bacteria 2106
168 Ga0496125_0135561 3300048928 Bacteria 1723
169 Ga0501042_0032199 3300049578 Bacteria 3712
170 Ga0501047_0086332 3300049581 Bacteria 3015
171 Ga0501070_0048387 3300049586 Bacteria 3532
172 Ga0501070_0074025 3300049586 Bacteria 2819
173 Ga0501080_0387753 3300049742 Bacteria 1258
174 Ga0501083_0023483 3300049744 Bacteria 4275
175 Ga0501035_0547365 3300049822 Bacteria 948
176 Ga0501044_0384527 3300049823 Bacteria 1318
177 Ga0501044_0468594 3300049823 Bacteria 1164
178 Ga0495601_0000122 3300053077 Bacteria 43268
179 Ga0495612_0014413 3300053078 Bacteria 3179
180 Ga0495595_0000014 3300053084 Bacteria 145255
181 Ga0495619_0000022 3300053085 Bacteria 184144
182 Ga0495619_0000114 3300053085 Bacteria 59624
183 Ga0500566_0012227 3300053094 Bacteria 5054
184 Ga0500566_0244754 3300053094 Unclassified 876

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0074025 Ga0501070_0074025_346_942 197
2 3300049581 Ga0501047_0086332 Ga0501047_0086332_286_891 199
3 3300049744 Ga0501083_0023483 Ga0501083_0023483_2266_2871 199
4 3300049823 Ga0501044_0384527 Ga0501044_0384527_484_1089 199
5 3300046559 Ga0495667_0000075 Ga0495667_0000075_31937_32590 203
6 3300047322 Ga0495680_0003091 Ga0495680_0003091_9611_10264 203
7 3300046459 Ga0495629_0029573 Ga0495629_0029573_370_999 204
8 3300048911 Ga0496108_0000150 Ga0496108_0000150_57184_57855 206
9 3300048912 Ga0496109_0000007 Ga0496109_0000007_237861_238532 206
10 3300013308 Ga0157375_10002378 Ga0157375_1000237815 208
11 3300044842 Ga0466957_0003132 Ga0466957_0003132_4309_4980 209
12 3300005614 Ga0068856_100002319 Ga0068856_1000023194 210
13 3300026078 Ga0207702_10000016 Ga0207702_10000016131 210
14 3300046516 Ga0495628_0000323 Ga0495628_0000323_30574_31284 210
15 3300009551 Ga0105238_10521795 Ga0105238_105217951 211
16 3300010375 Ga0105239_10093565 Ga0105239_100935653 211
17 3300025914 Ga0207671_10255612 Ga0207671_102556122 211
18 3300047472 Ga0495686_0060283 Ga0495686_0060283_161_823 211
19 3300009177 Ga0105248_10000032 Ga0105248_10000032159 212
20 3300025941 Ga0207711_10000020 Ga0207711_10000020215 212
21 3300005455 Ga0070663_100025972 Ga0070663_1000259721 214
22 3300005530 Ga0070679_100035317 Ga0070679_1000353171 214
23 3300025912 Ga0207707_10374102 Ga0207707_103741021 214
24 3300025917 Ga0207660_10254822 Ga0207660_102548221 214
25 3300025921 Ga0207652_10029627 Ga0207652_100296271 214
26 3300026067 Ga0207678_10049330 Ga0207678_100493304 214
27 3300048924 Ga0496121_0026538 Ga0496121_0026538_2226_2933 215
28 3300049742 Ga0501080_0387753 Ga0501080_0387753_152_826 215
29 3300049822 Ga0501035_0547365 Ga0501035_0547365_214_888 215
30 3300005367 Ga0070667_100290265 Ga0070667_1002902652 216
31 3300005548 Ga0070665_100728557 Ga0070665_1007285572 216
32 3300005937 Ga0081455_10245019 Ga0081455_102450192 216
33 3300025903 Ga0207680_10361518 Ga0207680_103615181 216
34 3300028379 Ga0268266_10065925 Ga0268266_100659251 216
35 3300048906 Ga0496103_0063054 Ga0496103_0063054_574_1272 216
36 3300048919 Ga0496116_0000819 Ga0496116_0000819_13548_14219 216
37 3300048920 Ga0496117_0007580 Ga0496117_0007580_9678_10376 216
38 3300048921 Ga0496118_0002138 Ga0496118_0002138_9750_10448 216
39 3300048921 Ga0496118_0061977 Ga0496118_0061977_1516_2226 216
40 3300048922 Ga0496119_0004262 Ga0496119_0004262_117_788 216
41 3300048923 Ga0496120_0001229 Ga0496120_0001229_19802_20512 216
42 3300048924 Ga0496121_0109811 Ga0496121_0109811_438_1106 216
43 3300048928 Ga0496125_0135561 Ga0496125_0135561_973_1686 216
44 3300049586 Ga0501070_0048387 Ga0501070_0048387_2166_2846 216
45 3300049823 Ga0501044_0468594 Ga0501044_0468594_374_1054 216
46 3300053094 Ga0500566_0244754 Ga0500566_0244754_13_681 216
47 3300036647 Ga0316582_0178987 Ga0316582_0178987_80_739 217
48 3300048088 Ga0495602_0273229 Ga0495602_0273229_425_1081 217
49 3300005365 Ga0070688_100012815 Ga0070688_1000128154 218
50 3300005436 Ga0070713_100000933 Ga0070713_10000093314 218
51 3300005466 Ga0070685_10000018 Ga0070685_1000001884 218
52 3300005539 Ga0068853_100161693 Ga0068853_1001616932 218
53 3300005614 Ga0068856_100034034 Ga0068856_1000340343 218
54 3300005616 Ga0068852_100000012 Ga0068852_10000001288 218
55 3300006881 Ga0068865_100000101 Ga0068865_10000010110 218
56 3300009098 Ga0105245_10000283 Ga0105245_1000028333 218
57 3300013102 Ga0157371_10003923 Ga0157371_1000392310 218
58 3300013105 Ga0157369_10000142 Ga0157369_1000014295 218
59 3300025927 Ga0207687_10000007 Ga0207687_10000007161 218
60 3300025928 Ga0207700_10000070 Ga0207700_1000007025 218
61 3300025938 Ga0207704_10000025 Ga0207704_10000025129 218
62 3300026041 Ga0207639_10534503 Ga0207639_105345032 218
63 3300026078 Ga0207702_10019788 Ga0207702_100197884 218
64 3300026142 Ga0207698_10000012 Ga0207698_10000012207 218
65 3300046683 Ga0495658_0019737 Ga0495658_0019737_1957_2628 218
66 3300047673 Ga0495593_0033158 Ga0495593_0033158_369_1040 218
67 3300005337 Ga0070682_100000080 Ga0070682_10000008087 219
68 3300005345 Ga0070692_10032943 Ga0070692_100329432 219
69 3300005365 Ga0070688_100016910 Ga0070688_1000169104 219
70 3300005436 Ga0070713_100049950 Ga0070713_1000499504 219
71 3300005439 Ga0070711_100333536 Ga0070711_1003335362 219
72 3300005578 Ga0068854_100001007 Ga0068854_1000010075 219
73 3300009098 Ga0105245_10044235 Ga0105245_100442352 219
74 3300013307 Ga0157372_10002742 Ga0157372_100027424 219
75 3300020082 Ga0206353_10171651 Ga0206353_101716512 219
76 3300025905 Ga0207685_10163478 Ga0207685_101634782 219
77 3300025916 Ga0207663_10264337 Ga0207663_102643372 219
78 3300025927 Ga0207687_10004304 Ga0207687_100043042 219
79 3300045836 Ga0466958_0186809 Ga0466958_0186809_588_1250 219
80 3300045976 Ga0466967_0000046 Ga0466967_0000046_40138_40800 219
81 3300046511 Ga0495608_0000031 Ga0495608_0000031_38806_39468 219
82 3300046675 Ga0495657_0000024 Ga0495657_0000024_38806_39468 219
83 3300046684 Ga0495669_0147093 Ga0495669_0147093_272_937 219
84 3300047444 Ga0495675_0000209 Ga0495675_0000209_38809_39471 219
85 3300048913 Ga0496110_0000033 Ga0496110_0000033_31918_32583 219
86 3300048914 Ga0496111_0000125 Ga0496111_0000125_29844_30509 219
87 3300048915 Ga0496112_0001891 Ga0496112_0001891_13407_14072 219
88 3300048916 Ga0496113_0000007 Ga0496113_0000007_63140_63805 219
89 3300053084 Ga0495595_0000014 Ga0495595_0000014_105788_106450 219
90 3300053085 Ga0495619_0000022 Ga0495619_0000022_157922_158587 219
91 3300053085 Ga0495619_0000114 Ga0495619_0000114_5091_5753 219
92 3300046476 Ga0495662_0004612 Ga0495662_0004612_2962_3627 220
93 3300005329 Ga0070683_100002179 Ga0070683_10000217913 221
94 3300005329 Ga0070683_100037511 Ga0070683_1000375113 221
95 3300005354 Ga0070675_100000192 Ga0070675_1000001927 221
96 3300005365 Ga0070688_100000012 Ga0070688_1000000126 221
97 3300005466 Ga0070685_10004378 Ga0070685_100043784 221
98 3300005535 Ga0070684_100037690 Ga0070684_1000376904 221
99 3300005535 Ga0070684_100073640 Ga0070684_1000736402 221
100 3300005544 Ga0070686_100038418 Ga0070686_1000384183 221
101 3300005577 Ga0068857_100542163 Ga0068857_1005421632 221
102 3300005616 Ga0068852_100058553 Ga0068852_1000585533 221
103 3300006175 Ga0070712_100002610 Ga0070712_1000026104 221
104 3300013297 Ga0157378_10003055 Ga0157378_1000305513 221
105 3300025915 Ga0207693_10020740 Ga0207693_100207403 221
106 3300025926 Ga0207659_10000020 Ga0207659_1000002029 221
107 3300025944 Ga0207661_10002561 Ga0207661_100025618 221
108 3300025944 Ga0207661_10010893 Ga0207661_100108933 221
109 3300026116 Ga0207674_10544685 Ga0207674_105446852 221
110 3300026121 Ga0207683_10038479 Ga0207683_100384794 221
111 3300026142 Ga0207698_10004988 Ga0207698_100049889 221
112 3300028379 Ga0268266_10318215 Ga0268266_103182152 221
113 3300032126 Ga0307415_100003289 Ga0307415_1000032892 221
114 3300046517 Ga0495630_0000018 Ga0495630_0000018_29831_30499 221
115 3300046674 Ga0495588_0000198 Ga0495588_0000198_27586_28254 221
116 3300046681 Ga0495647_0000437 Ga0495647_0000437_2845_3513 221
117 3300046689 Ga0495613_0000352 Ga0495613_0000352_21394_22059 221
118 3300046690 Ga0495624_0000037 Ga0495624_0000037_69318_69986 221
119 3300047321 Ga0495676_0229350 Ga0495676_0229350_353_1021 221
120 3300048911 Ga0496108_0057002 Ga0496108_0057002_1975_2643 221
121 3300048912 Ga0496109_0000028 Ga0496109_0000028_127262_127930 221
122 3300053077 Ga0495601_0000122 Ga0495601_0000122_22228_22893 221
123 3300003659 JGI25404J52841_10012147 JGI25404J52841_100121472 222
124 3300005327 Ga0070658_10123859 Ga0070658_101238592 222
125 3300005330 Ga0070690_100084021 Ga0070690_1000840212 222
126 3300005335 Ga0070666_10029130 Ga0070666_100291304 222
127 3300005548 Ga0070665_100005634 Ga0070665_10000563411 222
128 3300005834 Ga0068851_10008723 Ga0068851_100087235 222
129 3300005983 Ga0081540_1000006 Ga0081540_1000006110 222
130 3300009176 Ga0105242_10000357 Ga0105242_100003574 222
131 3300013297 Ga0157378_10055810 Ga0157378_100558104 222
132 3300014326 Ga0157380_10008530 Ga0157380_100085303 222
133 3300020070 Ga0206356_11027955 Ga0206356_110279552 222
134 3300025321 Ga0207656_10045712 Ga0207656_100457122 222
135 3300025900 Ga0207710_10156243 Ga0207710_101562432 222
136 3300025903 Ga0207680_10002472 Ga0207680_100024722 222
137 3300025934 Ga0207686_10001286 Ga0207686_100012868 222
138 3300025986 Ga0207658_10253622 Ga0207658_102536222 222
139 3300026023 Ga0207677_10005697 Ga0207677_100056972 222
140 3300028379 Ga0268266_10002478 Ga0268266_100024787 222
141 3300046460 Ga0495638_0084209 Ga0495638_0084209_1121_1813 222
142 3300046507 Ga0495606_0000211 Ga0495606_0000211_31472_32143 222
143 3300047320 Ga0495672_0111018 Ga0495672_0111018_390_1082 222
144 3300048907 Ga0496104_0000002 Ga0496104_0000002_673389_674060 222
145 3300048908 Ga0496105_0000001 Ga0496105_0000001_654119_654790 222
146 3300048913 Ga0496110_0110931 Ga0496110_0110931_244_915 222
147 3300048914 Ga0496111_0179597 Ga0496111_0179597_58_729 222
148 3300048914 Ga0496111_0257474 Ga0496111_0257474_239_910 222
149 3300048922 Ga0496119_0005629 Ga0496119_0005629_4187_4858 222
150 3300049578 Ga0501042_0032199 Ga0501042_0032199_2349_3023 222
151 3300053078 Ga0495612_0014413 Ga0495612_0014413_1245_1916 222
152 3300001979 JGI24740J21852_10000416 JGI24740J21852_100004165 223
153 3300005337 Ga0070682_100091588 Ga0070682_1000915882 223
154 3300005337 Ga0070682_100322685 Ga0070682_1003226851 223
155 3300005366 Ga0070659_100024609 Ga0070659_1000246094 223
156 3300005367 Ga0070667_100100317 Ga0070667_1001003173 223
157 3300005441 Ga0070700_100232618 Ga0070700_1002326181 223
158 3300005466 Ga0070685_10119252 Ga0070685_101192522 223
159 3300005563 Ga0068855_100161358 Ga0068855_1001613583 223
160 3300005840 Ga0068870_10119655 Ga0068870_101196552 223
161 3300005985 Ga0081539_10001003 Ga0081539_100010039 223
162 3300009101 Ga0105247_10004151 Ga0105247_100041514 223
163 3300009148 Ga0105243_10013917 Ga0105243_100139175 223
164 3300013297 Ga0157378_10131082 Ga0157378_101310822 223
165 3300014969 Ga0157376_10005648 Ga0157376_100056486 223
166 3300017792 Ga0163161_10036546 Ga0163161_100365464 223
167 3300025900 Ga0207710_10000580 Ga0207710_1000058015 223
168 3300025908 Ga0207643_10131750 Ga0207643_101317502 223
169 3300025986 Ga0207658_10082719 Ga0207658_100827192 223
170 3300026118 Ga0207675_100381396 Ga0207675_1003813962 223
171 3300041486 Ga0451807_0988646 Ga0451807_0988646_103_789 223
172 3300041505 Ga0451849_0770733 Ga0451849_0770733_132_833 223
173 3300041505 Ga0451849_0810359 Ga0451849_0810359_593_1279 223
174 3300046459 Ga0495629_0024568 Ga0495629_0024568_2999_3685 223
175 3300046515 Ga0495620_0070213 Ga0495620_0070213_475_1158 223
176 3300046533 Ga0495640_0106877 Ga0495640_0106877_416_1114 223
177 3300046660 Ga0495625_0000122 Ga0495625_0000122_98186_98869 223
178 3300046678 Ga0495599_0206659 Ga0495599_0206659_66_761 223
179 3300046809 Ga0495600_0024991 Ga0495600_0024991_2282_2959 223
180 3300047317 Ga0495604_0000073 Ga0495604_0000073_20647_21324 223
181 3300047319 Ga0495674_0000042 Ga0495674_0000042_41471_42169 223
182 3300048088 Ga0495602_0000021 Ga0495602_0000021_11109_11786 223
183 3300048907 Ga0496104_0031192 Ga0496104_0031192_3150_3827 223
184 3300053094 Ga0500566_0012227 Ga0500566_0012227_3320_4006 223

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

48

94

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gpc-assembly1.cif.gz_B structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.8619 29 202
5gpa-assembly1.cif.gz_B structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.8438 31 203
5gpa-assembly1.cif.gz_A structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.8369 29 205
7jnp-assembly1.cif.gz_B mtrr bound to the rpoh operator from neisseria gonorrhoeae 0.8207 29 198
3whc-assembly2.cif.gz_D crystal structure of a transcriptional regulator fadr from bacillus subtilis in complex with stearoyl-coa 0.8126 29 208
ID Description Score Start End Superfamily
6azhA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9615 28 76 1.10.10.60
3btjA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9543 29 76 1.10.10.60
2dtzA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9512 29 76 1.10.10.60
2hq5A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9497 29 76 1.10.10.60
1jupA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9497 29 76 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A537YT36-F1-model_v4 TetR/AcrR family transcriptional regulator 0.953 26 222 GO:0000976
GO:0003700
AF-A0A7W9M1G1-F1-model_v4 AcrR family transcriptional regulator 0.9529 26 219 GO:0000976
GO:0003700
AF-A0A6H9YBF4-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9401 20 212
AF-A0A117MPW8-F1-model_v4 TetR family transcriptional regulator 0.9355 14 216 GO:0000976
GO:0003700
AF-A0A1M3BIS8-F1-model_v4 HTH tetR-type domain-containing protein 0.9318 13 216 GO:0000976
GO:0003700

Feature Viewer

pLDDT pTM Quality
90.67 0.84 High
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Predicted Structure (AlphaFold2)

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