F284153

General Info

Members Datasets Scaffolds Average Seq Length
185 132 370 326

Family's Representative Sequence

Representative Sequence 3300006353|Ga0075370_10099524|Ga0075370_100995241
Length 349
Sequence MTTSPMDAAATTSQSPTLAAVAMVTAYDLLVSNLEKDPPEVGAIAIAGDVILEPRDVPLGGPRAMTVRRTLPQRRRSLIGPWCFVDHYGPDPVAEVGGMHVPPHPHTGLQTVSWLFQGEIEHRDSVGSHAMVRPGELNLMTAGRGIQHSEVSTDSTKVLHGAQLWVALPDASRFSAPFFEHYVPSPVRLGETTLRVFLGSLAGETSTATAFSPIVGAQIDLPGSASVELPVEAAFEHGVLLDQGSVAIEGRDLPLSHLAFREAGATSIRLVAGDEGARMLLIGGAPFGESIVMWWNFIGRSHDEIVQFRAEWQSDVIARENLDGPFGSIGEGPALPAPELPAVRLKPRD

Samples

Sample ID Description Type Environment
1 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
7 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
8 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
35 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
38 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
52 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
61 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
62 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
63 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
64 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
65 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
66 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
67 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
68 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
69 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
70 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
71 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
72 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
73 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
74 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
75 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
76 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
77 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
78 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
79 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
80 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
81 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
100 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
105 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
106 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
107 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
108 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
109 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
110 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
111 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
114 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
115 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
116 2643221616 Leifsonia sp. Root227 Isolate Unclassified
117 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
118 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
119 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
120 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
121 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
122 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
123 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
124 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
125 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
126 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
127 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
128 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
129 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
130 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
131 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
132 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.73
Metatranscriptomes 0.54
Isolates 9.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.76
Nodule 0
Rhizoplane 10.27
Rhizosphere 56.76
Stem 0
Stem Tuber 0.54
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075370_10099524 3300006353 Bacteria 1682
2 JGI25164J39214_1000186 3300002772 Bacteria 54746
3 JGI25165J46597_1000055 3300003214 Bacteria 224187
4 Ga0006562J51391_1145100 3300003578 Bacteria 1780
5 Ga0055539_1000019 3300003752 Bacteria 341727
6 Ga0055533_1000023 3300003756 Bacteria 341727
7 Ga0055525_1000125 3300003759 Bacteria 115822
8 Ga0055527_1000032 3300003760 Bacteria 153292
9 Ga0055542_1000164 3300003762 Bacteria 83529
10 Ga0055529_1000499 3300003763 Bacteria 35503
11 Ga0070658_10183433 3300005327 Bacteria 1761
12 Ga0070658_10197068 3300005327 Bacteria 1698
13 Ga0070658_10476042 3300005327 Bacteria 1077
14 Ga0070672_100016086 3300005543 Bacteria 5350
15 Ga0068856_100181569 3300005614 Bacteria 2117
16 Ga0068864_100212081 3300005618 Bacteria 1784
17 Ga0068861_100295328 3300005719 Bacteria 1401
18 Ga0068863_100017437 3300005841 Bacteria 6885
19 Ga0068858_100005146 3300005842 Bacteria 12814
20 Ga0075367_10104523 3300006178 Bacteria 1734
21 Ga0105240_10038979 3300009093 Bacteria 6090
22 Ga0105240_10176610 3300009093 Bacteria 2524
23 Ga0105245_10013845 3300009098 Bacteria 7027
24 Ga0105248_10005514 3300009177 Bacteria 13895
25 Ga0105239_10180288 3300010375 Bacteria 2363
26 Ga0157371_10032627 3300013102 Bacteria 3746
27 Ga0157369_10054673 3300013105 Bacteria 4311
28 Ga0157369_10150858 3300013105 Bacteria 2456
29 Ga0157369_10259583 3300013105 Bacteria 1812
30 Ga0157372_10291009 3300013307 Bacteria 1900
31 Ga0163163_10647025 3300014325 Bacteria 1121
32 Ga0157377_10068595 3300014745 Bacteria 2044
33 Ga0157379_10011998 3300014968 Bacteria 7570
34 Ga0157379_10013159 3300014968 Bacteria 7244
35 Ga0209566_100031 3300025225 Bacteria 341555
36 Ga0209674_100001 3300025226 Bacteria 4013750
37 Ga0209672_100006 3300025228 Bacteria 1004497
38 Ga0209147_100227 3300025229 Bacteria 55956
39 Ga0209563_100001 3300025230 Bacteria 4013775
40 Ga0209563_100609 3300025230 Bacteria 11639
41 Ga0207427_100054 3300025231 Bacteria 216315
42 Ga0209677_100001 3300025253 Bacteria 4013787
43 Ga0209148_1000152 3300025254 Bacteria 153782
44 Ga0209233_1000001 3300025261 Bacteria 2992747
45 Ga0209455_1000134 3300025272 Bacteria 153783
46 Ga0209455_1003210 3300025272 Bacteria 5911
47 Ga0207705_10363619 3300025909 Bacteria 1116
48 Ga0207695_10007866 3300025913 Bacteria 13459
49 Ga0207695_10014110 3300025913 Bacteria 9486
50 Ga0207687_10017317 3300025927 Bacteria 4742
51 Ga0207691_10044121 3300025940 Bacteria 4105
52 Ga0207711_10000546 3300025941 Bacteria 38381
53 Ga0207703_10000607 3300026035 Bacteria 36369
54 Ga0207702_10105342 3300026078 Bacteria 2498
55 Ga0207641_10002264 3300026088 Bacteria 17942
56 Ga0307514_10006371 3300031649 Bacteria 10295
57 Ga0307409_100061448 3300031995 Bacteria 2936
58 Ga0307416_100000338 3300032002 Bacteria 24246
59 Ga0307416_100164084 3300032002 Bacteria 2058
60 Ga0307416_100326733 3300032002 Bacteria 1539
61 Ga0307416_100467804 3300032002 Bacteria 1318
62 Ga0307415_100000230 3300032126 Bacteria 24541
63 Ga0373942_0004319 3300035207 Bacteria 3308
64 Ga0395899_0001849 3300037312 Bacteria 17519
65 Ga0395900_0020196 3300037418 Bacteria 6797
66 Ga0395898_0000060 3300037466 Bacteria 273835
67 Ga0395901_0147664 3300038443 Bacteria 2471
68 Ga0395901_0148071 3300038443 Bacteria 2467
69 Ga0451853_0921284 3300041512 Bacteria 2179
70 Ga0466972_0004563 3300044658 Bacteria 6939
71 Ga0466961_0032770 3300044693 Bacteria 3338
72 Ga0466961_0180983 3300044693 Bacteria 1309
73 Ga0466958_0010643 3300045836 Bacteria 5158
74 Ga0466958_0122908 3300045836 Bacteria 1626
75 Ga0496100_0002239 3300048903 Bacteria 9773
76 Ga0496101_0165005 3300048904 Bacteria 1700
77 Ga0496102_0000244 3300048905 Bacteria 71365
78 Ga0496103_0000437 3300048906 Bacteria 36022
79 Ga0496104_0033330 3300048907 Bacteria 4797
80 Ga0496104_0042615 3300048907 Bacteria 4260
81 Ga0496104_0091370 3300048907 Bacteria 2910
82 Ga0496105_0015038 3300048908 Bacteria 6157
83 Ga0496105_0024628 3300048908 Bacteria 4891
84 Ga0496107_0112047 3300048910 Bacteria 2006
85 Ga0496107_0302694 3300048910 Bacteria 1190
86 Ga0496110_0396500 3300048913 Bacteria 1258
87 Ga0496111_0282793 3300048914 Bacteria 1230
88 Ga0496113_0347799 3300048916 Bacteria 1189
89 Ga0496114_0031291 3300048917 Bacteria 4378
90 Ga0496114_0285293 3300048917 Bacteria 1456
91 Ga0496115_0019615 3300048918 Bacteria 5205
92 Ga0496115_0137049 3300048918 Bacteria 2018
93 Ga0496115_0205047 3300048918 Bacteria 1629
94 Ga0496116_0000354 3300048919 Bacteria 72118
95 Ga0496117_0000410 3300048920 Bacteria 72120
96 Ga0496117_0011452 3300048920 Bacteria 7946
97 Ga0496118_0000114 3300048921 Bacteria 148007
98 Ga0496118_0006045 3300048921 Bacteria 13483
99 Ga0496118_0012992 3300048921 Bacteria 7928
100 Ga0496119_0000311 3300048922 Bacteria 68041
101 Ga0496119_0010210 3300048922 Bacteria 7924
102 Ga0496119_0019316 3300048922 Bacteria 5025
103 Ga0496120_0000356 3300048923 Bacteria 75147
104 Ga0496120_0047458 3300048923 Bacteria 2476
105 Ga0496121_0004223 3300048924 Bacteria 19584
106 Ga0496122_0157679 3300048925 Bacteria 1390
107 Ga0496124_0027001 3300048927 Bacteria 5166
108 Ga0496126_0001059 3300048929 Bacteria 46430
109 Ga0496126_0029129 3300048929 Bacteria 5248
110 Ga0501031_0002710 3300049568 Bacteria 11275
111 Ga0501033_0054263 3300049570 Bacteria 2966
112 Ga0501033_0160895 3300049570 Bacteria 1616
113 Ga0501034_0019171 3300049571 Bacteria 7004
114 Ga0501036_0011453 3300049572 Bacteria 7341
115 Ga0501036_0015094 3300049572 Bacteria 6447
116 Ga0501037_0009031 3300049573 Bacteria 7306
117 Ga0501037_0145942 3300049573 Bacteria 1692
118 Ga0501038_0003139 3300049574 Bacteria 15415
119 Ga0501038_0010147 3300049574 Bacteria 8622
120 Ga0501038_0177579 3300049574 Bacteria 1720
121 Ga0501039_0002346 3300049575 Bacteria 14084
122 Ga0501039_0045963 3300049575 Bacteria 3373
123 Ga0501040_0001036 3300049576 Bacteria 17613
124 Ga0501040_0081716 3300049576 Bacteria 2239
125 Ga0501040_0113365 3300049576 Bacteria 1897
126 Ga0501041_0003367 3300049577 Bacteria 9199
127 Ga0501041_0006516 3300049577 Bacteria 6835
128 Ga0501042_0006079 3300049578 Bacteria 7821
129 Ga0501042_0018718 3300049578 Bacteria 4799
130 Ga0501043_0012594 3300049579 Bacteria 6615
131 Ga0501043_0086405 3300049579 Bacteria 2465
132 Ga0501046_0006504 3300049580 Bacteria 10334
133 Ga0501046_0010473 3300049580 Bacteria 7960
134 Ga0501048_0005847 3300049582 Bacteria 9359
135 Ga0501048_0031298 3300049582 Bacteria 3849
136 Ga0501070_0000034 3300049586 Bacteria 128605
137 Ga0501071_0030770 3300049587 Bacteria 3798
138 Ga0501071_0215521 3300049587 Bacteria 1444
139 Ga0501072_0008316 3300049588 Bacteria 7882
140 Ga0501072_0094496 3300049588 Bacteria 2375
141 Ga0501075_0008295 3300049591 Bacteria 7243
142 Ga0501076_0014280 3300049592 Bacteria 5978
143 Ga0501076_0018373 3300049592 Bacteria 5329
144 Ga0501077_0003477 3300049593 Bacteria 9460
145 Ga0501077_0009883 3300049593 Bacteria 5935
146 Ga0501079_0003637 3300049741 Bacteria 11354
147 Ga0501079_0016214 3300049741 Bacteria 5695
148 Ga0501080_0118159 3300049742 Bacteria 2458
149 Ga0501081_0014734 3300049743 Bacteria 5158
150 Ga0501035_0290771 3300049822 Bacteria 1379
151 Ga0501045_0005770 3300049824 Bacteria 8566
152 Ga0500635_0000002 3300053080 Bacteria 265613
153 Ga0500651_0000494 3300053093 Bacteria 20428
154 Ga0500559_0000129 3300053136 Bacteria 58778
155 Ga0500559_0000898 3300053136 Bacteria 18988
156 Ga0500573_0000052 3300053140 Bacteria 94687
157 Ga0500573_0017483 3300053140 Bacteria 4083
158 Ga0500573_0034522 3300053140 Bacteria 2918
159 Ga0500577_0018514 3300053142 Bacteria 2240
160 Ga0500590_000220 3300053148 Bacteria 17230
161 Ga0501084_0007037 3300054114 Bacteria 9274
162 Ga0501084_0011997 3300054114 Bacteria 7175
163 Ga0501082_0032576 3300060353 Bacteria 4495
164 Ga0501082_0128887 3300060353 Bacteria 2195
165 Ga0466962_0041631 3300061719 Bacteria 2198
166 Ga0530510_0017974 3300061734 Bacteria 5012
167 Ga0530510_0029814 3300061734 Bacteria 3917
168 2537900899 2537561592 Bacteria 4348607
169 2644098062 2643221616 Bacteria 4066575
170 2774394892 2773857762 Bacteria 5971770
171 2809194255 2808606439 Bacteria 5952208
172 2812349007 2811994878 Bacteria 5992952
173 2816509113 2816332139 Bacteria 9138787
174 2837269602 2837268691 Bacteria 7850704
175 2844843479 2844841374 Bacteria 3917147
176 2857712305 2857710386 Bacteria 3186771
177 2870625612 2870622029 Bacteria 3643329
178 2884766620 2884763398 Bacteria 4091164
179 2891973237 2891968417 Bacteria 5821697
180 2919525625 2919523602 Bacteria 3788128
181 2939660724 2939657138 Bacteria 3740283
182 2946034026 2946033335 Bacteria 3835514
183 2956941872 2956939328 Bacteria 3474458
184 2990046485 2990044586 Bacteria 6603797
185 3001119228 3001119090 Bacteria 3449530
186 Ga0075370_10099524
187 JGI25164J39214_1000186
188 JGI25165J46597_1000055
189 Ga0006562J51391_1145100
190 Ga0055539_1000019
191 Ga0055533_1000023
192 Ga0055525_1000125
193 Ga0055527_1000032
194 Ga0055542_1000164
195 Ga0055529_1000499
196 Ga0070658_10183433
197 Ga0070658_10197068
198 Ga0070658_10476042
199 Ga0070672_100016086
200 Ga0068856_100181569
201 Ga0068864_100212081
202 Ga0068861_100295328
203 Ga0068863_100017437
204 Ga0068858_100005146
205 Ga0075367_10104523
206 Ga0105240_10038979
207 Ga0105240_10176610
208 Ga0105245_10013845
209 Ga0105248_10005514
210 Ga0105239_10180288
211 Ga0157371_10032627
212 Ga0157369_10054673
213 Ga0157369_10150858
214 Ga0157369_10259583
215 Ga0157372_10291009
216 Ga0163163_10647025
217 Ga0157377_10068595
218 Ga0157379_10011998
219 Ga0157379_10013159
220 Ga0209566_100031
221 Ga0209674_100001
222 Ga0209672_100006
223 Ga0209147_100227
224 Ga0209563_100001
225 Ga0209563_100609
226 Ga0207427_100054
227 Ga0209677_100001
228 Ga0209148_1000152
229 Ga0209233_1000001
230 Ga0209455_1000134
231 Ga0209455_1003210
232 Ga0207705_10363619
233 Ga0207695_10007866
234 Ga0207695_10014110
235 Ga0207687_10017317
236 Ga0207691_10044121
237 Ga0207711_10000546
238 Ga0207703_10000607
239 Ga0207702_10105342
240 Ga0207641_10002264
241 Ga0307514_10006371
242 Ga0307409_100061448
243 Ga0307416_100000338
244 Ga0307416_100164084
245 Ga0307416_100326733
246 Ga0307416_100467804
247 Ga0307415_100000230
248 Ga0373942_0004319
249 Ga0395899_0001849
250 Ga0395900_0020196
251 Ga0395898_0000060
252 Ga0395901_0147664
253 Ga0395901_0148071
254 Ga0451853_0921284
255 Ga0466972_0004563
256 Ga0466961_0032770
257 Ga0466961_0180983
258 Ga0466958_0010643
259 Ga0466958_0122908
260 Ga0496100_0002239
261 Ga0496101_0165005
262 Ga0496102_0000244
263 Ga0496103_0000437
264 Ga0496104_0033330
265 Ga0496104_0042615
266 Ga0496104_0091370
267 Ga0496105_0015038
268 Ga0496105_0024628
269 Ga0496107_0112047
270 Ga0496107_0302694
271 Ga0496110_0396500
272 Ga0496111_0282793
273 Ga0496113_0347799
274 Ga0496114_0031291
275 Ga0496114_0285293
276 Ga0496115_0019615
277 Ga0496115_0137049
278 Ga0496115_0205047
279 Ga0496116_0000354
280 Ga0496117_0000410
281 Ga0496117_0011452
282 Ga0496118_0000114
283 Ga0496118_0006045
284 Ga0496118_0012992
285 Ga0496119_0000311
286 Ga0496119_0010210
287 Ga0496119_0019316
288 Ga0496120_0000356
289 Ga0496120_0047458
290 Ga0496121_0004223
291 Ga0496122_0157679
292 Ga0496124_0027001
293 Ga0496126_0001059
294 Ga0496126_0029129
295 Ga0501031_0002710
296 Ga0501033_0054263
297 Ga0501033_0160895
298 Ga0501034_0019171
299 Ga0501036_0011453
300 Ga0501036_0015094
301 Ga0501037_0009031
302 Ga0501037_0145942
303 Ga0501038_0003139
304 Ga0501038_0010147
305 Ga0501038_0177579
306 Ga0501039_0002346
307 Ga0501039_0045963
308 Ga0501040_0001036
309 Ga0501040_0081716
310 Ga0501040_0113365
311 Ga0501041_0003367
312 Ga0501041_0006516
313 Ga0501042_0006079
314 Ga0501042_0018718
315 Ga0501043_0012594
316 Ga0501043_0086405
317 Ga0501046_0006504
318 Ga0501046_0010473
319 Ga0501048_0005847
320 Ga0501048_0031298
321 Ga0501070_0000034
322 Ga0501071_0030770
323 Ga0501071_0215521
324 Ga0501072_0008316
325 Ga0501072_0094496
326 Ga0501075_0008295
327 Ga0501076_0014280
328 Ga0501076_0018373
329 Ga0501077_0003477
330 Ga0501077_0009883
331 Ga0501079_0003637
332 Ga0501079_0016214
333 Ga0501080_0118159
334 Ga0501081_0014734
335 Ga0501035_0290771
336 Ga0501045_0005770
337 Ga0500635_0000002
338 Ga0500651_0000494
339 Ga0500559_0000129
340 Ga0500559_0000898
341 Ga0500573_0000052
342 Ga0500573_0017483
343 Ga0500573_0034522
344 Ga0500577_0018514
345 Ga0500590_000220
346 Ga0501084_0007037
347 Ga0501084_0011997
348 Ga0501082_0032576
349 Ga0501082_0128887
350 Ga0466962_0041631
351 Ga0530510_0017974
352 Ga0530510_0029814
353 2537900899
354 2644098062
355 2774394892
356 2809194255
357 2812349007
358 2816509113
359 2837269602
360 2844843479
361 2857712305
362 2870625612
363 2884766620
364 2891973237
365 2919525625
366 2939660724
367 2946034026
368 2956941872
369 2990046485
370 3001119228

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05726

Pirin_C

Pirin C-terminal cupin domain

216

317

0.95

PF02678

Pirin

Pirin

64

166

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6d0g-assembly1.cif.gz_A 1.78 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.9506 24 322
7tfq-assembly1.cif.gz_A crystal structure of the pirin family protein redox-sensitive bicupin yhak bound to copper ion from yersinia pestis 0.929 25 287
6d0g-assembly1.cif.gz_A 1.78 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.9228 24 322
6d0p-assembly4.cif.gz_D 1.88 angstrom resolution crystal structure of quercetin 2,3-dioxygenase from acinetobacter baumannii 0.9118 25 290
5jct-assembly1.cif.gz_A crystal structure of human pirin in complex with a chemical probe pyrrolidine 24 0.8922 25 300
ID Description Score Start End Superfamily
af_I1KYF4_44_139_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9187 56 153 2.60.120.10
af_C0P2Q1_61_325_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9148 30 289 2.60.120.10
af_I1JJF8_30_139_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9091 42 153 2.60.120.10
af_Q557H8_87_213_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9066 38 158 2.60.120.10
af_Q54UY3_11_140_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8974 28 157 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A2S8MJH4-F1-model_v4 deleted 0.9859 27 158
AF-A0A6G9FUA9-F1-model_v4 Pirin 0.9792 40 326
AF-A0A3N2ARF5-F1-model_v4 Pirin N-terminal domain-containing protein 0.9773 23 326 GO:0046872
AF-A0A7K2Q3T1-F1-model_v4 Pirin family protein 0.9772 25 170 GO:0046872
AF-A0A2E2Q367-F1-model_v4 Pirin 0.9746 40 326 GO:0046872

Map