F284192

General Info

Members Datasets Scaffolds Average Seq Length
185 119 370 595

Family's Representative Sequence

Representative Sequence 3300006881|Ga0068865_100001323|Ga0068865_10000132312
Length 613
Sequence MEEWRLADGGAGLGYLGVTRSLSGRLWRERGAEGALCRQLQLAQGLSEPLARALVARGVGADQAETYLNPTLKALFPDPSSFTDMDRAAGILVDALERRRALVVFADYDVDGAASAAQLVRWFRAMGAELPIYVPDRIAEGYGPSPAAFRRLKAEGAELVVTVDCGAAAHDALACAAEIGLEVVVIDHHLMRGEDIPHVAALVNPNRPDDTSGQGHLAAAGVTFVLTAALNREARRRGLFGDHEGGRAEPDLRQALDLAAMGAICDVTELRGFNRALAAQGLKVMSAWRNPGLAALMQVAGGFKDEGQAVASVFTAGFILGPRINAGGRIGRADLGARLLSTDDPAEARDLAIELDGLNASRKEVEREVTEAAIAHIETQSNAPDAPMLLVAADDWHPGVIGIVAGRLREKYRKPTIVVGVDRAANVGKGSGRSQPGVNLGRAVQAAFDQGLLLAGGGHAMAAGLSVRPDTIPELRAFLCERLAAESEIAAAEDVVDVDALVTTRAADRALWQDFQRMAPFGPGNVEPLFALSDVRVERPMALRGGHVRVTLTDGSGGRLKAVAWRCEGTPLGQRLLQEGGAIHVAGKLKPDDWQGRAGVELEIEDAADPRRG

Samples

Sample ID Description Type Environment
1 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
2 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
36 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
37 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
63 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
78 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
79 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
80 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
81 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
82 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
85 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
88 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
89 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
90 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
91 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
92 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
93 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
94 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
95 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
96 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
100 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
101 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
102 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
103 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
104 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
105 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
106 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
107 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
108 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
109 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
110 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
111 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
112 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
113 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
114 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
115 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
116 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
117 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
118 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
119 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.84
Metatranscriptomes 0
Isolates 2.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.14
Nodule 0
Rhizoplane 2.16
Rhizosphere 72.97
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068865_100001323 3300006881 Bacteria 14451
2 Ga0055530_10000559 3300003791 Bacteria 32231
3 Ga0055531_10001956 3300003794 Bacteria 14387
4 Ga0055531_10018192 3300003794 Bacteria 2916
5 Ga0065165_1000277 3300005262 Bacteria 87540
6 Ga0070670_100000039 3300005331 Bacteria 152618
7 Ga0070670_100036354 3300005331 Bacteria 4238
8 Ga0070670_100054017 3300005331 Bacteria 3449
9 Ga0070680_100003371 3300005336 Bacteria 11923
10 Ga0070660_100008620 3300005339 Bacteria 7138
11 Ga0070691_10012652 3300005341 Bacteria 3864
12 Ga0070668_100000605 3300005347 Bacteria 23992
13 Ga0070668_100003765 3300005347 Bacteria 11194
14 Ga0070668_100005679 3300005347 Bacteria 9248
15 Ga0070671_100073331 3300005355 Bacteria 2859
16 Ga0070659_100006179 3300005366 Bacteria 8649
17 Ga0070659_100013772 3300005366 Bacteria 6031
18 Ga0070667_100001045 3300005367 Bacteria 25251
19 Ga0070681_10095042 3300005458 Bacteria 2929
20 Ga0070679_100021748 3300005530 Bacteria 6264
21 Ga0070665_100000327 3300005548 Bacteria 73382
22 Ga0070665_100000801 3300005548 Bacteria 41188
23 Ga0070665_100000934 3300005548 Bacteria 37393
24 Ga0068859_100005005 3300005617 Bacteria 13453
25 Ga0068859_100122932 3300005617 Bacteria 2662
26 Ga0068864_100000462 3300005618 Bacteria 35199
27 Ga0068864_100000521 3300005618 Bacteria 33096
28 Ga0068864_100068562 3300005618 Bacteria 3082
29 Ga0068863_100000007 3300005841 Bacteria 257578
30 Ga0068863_100003983 3300005841 Bacteria 14583
31 Ga0068858_100000031 3300005842 Bacteria 143397
32 Ga0068858_100033379 3300005842 Bacteria 4777
33 Ga0068860_100000128 3300005843 Bacteria 122731
34 Ga0068860_100000139 3300005843 Bacteria 119188
35 Ga0068862_100000121 3300005844 Bacteria 91849
36 Ga0068862_100002991 3300005844 Bacteria 14749
37 Ga0068862_100020961 3300005844 Bacteria 5461
38 Ga0068862_100087734 3300005844 Bacteria 2706
39 Ga0075368_10007127 3300006042 Bacteria 3937
40 Ga0075367_10000368 3300006178 Bacteria 16264
41 Ga0097620_100005005 3300006931 Bacteria 13453
42 Ga0097620_100122932 3300006931 Bacteria 2662
43 Ga0105240_10001061 3300009093 Bacteria 48640
44 Ga0105240_10003509 3300009093 Bacteria 24319
45 Ga0105240_10061285 3300009093 Bacteria 4688
46 Ga0105245_10067983 3300009098 Bacteria 3227
47 Ga0105248_10000559 3300009177 Bacteria 42238
48 Ga0105248_10005115 3300009177 Bacteria 14471
49 Ga0105248_10027236 3300009177 Bacteria 6360
50 Ga0105248_10212522 3300009177 Bacteria 2179
51 Ga0105238_10010241 3300009551 Bacteria 9404
52 Ga0105249_10000890 3300009553 Bacteria 26461
53 Ga0105239_10039199 3300010375 Bacteria 5191
54 Ga0157372_10051047 3300013307 Bacteria 4602
55 Ga0163163_10005169 3300014325 Bacteria 11255
56 Ga0163163_10038671 3300014325 Bacteria 4651
57 Ga0157379_10000697 3300014968 Bacteria 27269
58 Ga0157379_10032615 3300014968 Bacteria 4644
59 Ga0213876_10000252 3300021384 Bacteria 50523
60 Ga0209026_1000744 3300025250 Bacteria 18612
61 Ga0209758_1000920 3300025297 Bacteria 39827
62 Ga0209050_1000200 3300025298 Bacteria 134115
63 Ga0209257_1000225 3300025304 Bacteria 134023
64 Ga0209257_1000514 3300025304 Bacteria 67345
65 Ga0207705_10004697 3300025909 Bacteria 10299
66 Ga0207707_10034428 3300025912 Bacteria 4432
67 Ga0207695_10000728 3300025913 Bacteria 63935
68 Ga0207695_10002233 3300025913 Bacteria 29071
69 Ga0207695_10007649 3300025913 Bacteria 13691
70 Ga0207657_10011754 3300025919 Bacteria 8671
71 Ga0207657_10051476 3300025919 Bacteria 3579
72 Ga0207652_10006483 3300025921 Bacteria 9435
73 Ga0207681_10009366 3300025923 Bacteria 5982
74 Ga0207694_10090758 3300025924 Bacteria 2410
75 Ga0207650_10000099 3300025925 Bacteria 113522
76 Ga0207650_10035607 3300025925 Bacteria 3617
77 Ga0207644_10000460 3300025931 Bacteria 26333
78 Ga0207690_10000288 3300025932 Bacteria 35803
79 Ga0207704_10002947 3300025938 Bacteria 7683
80 Ga0207711_10001408 3300025941 Bacteria 22531
81 Ga0207711_10006196 3300025941 Bacteria 10109
82 Ga0207711_10030667 3300025941 Bacteria 4536
83 Ga0207711_10054436 3300025941 Bacteria 3434
84 Ga0207667_10006492 3300025949 Bacteria 14147
85 Ga0207667_10020622 3300025949 Bacteria 7325
86 Ga0207668_10000046 3300025972 Bacteria 102051
87 Ga0207668_10000465 3300025972 Bacteria 25478
88 Ga0207668_10011498 3300025972 Bacteria 5382
89 Ga0207658_10000106 3300025986 Bacteria 90920
90 Ga0207703_10000038 3300026035 Bacteria 175917
91 Ga0207703_10003531 3300026035 Bacteria 13081
92 Ga0207703_10011431 3300026035 Bacteria 6903
93 Ga0207639_10025884 3300026041 Bacteria 4258
94 Ga0207641_10000012 3300026088 Bacteria 375486
95 Ga0207641_10001351 3300026088 Bacteria 24324
96 Ga0207641_10022014 3300026088 Bacteria 5242
97 Ga0207676_10000119 3300026095 Bacteria 69303
98 Ga0207676_10000360 3300026095 Bacteria 38926
99 Ga0207676_10103621 3300026095 Bacteria 2365
100 Ga0207698_10123850 3300026142 Bacteria 2194
101 Ga0268266_10000064 3300028379 Bacteria 249533
102 Ga0268266_10000636 3300028379 Bacteria 47724
103 Ga0268266_10017199 3300028379 Bacteria 6174
104 Ga0268265_10002082 3300028380 Bacteria 15603
105 Ga0268265_10003418 3300028380 Bacteria 11427
106 Ga0268265_10049183 3300028380 Bacteria 3169
107 Ga0268264_10000046 3300028381 Bacteria 364597
108 Ga0268264_10000059 3300028381 Bacteria 306927
109 Ga0265318_10019139 3300028577 Bacteria 2781
110 Ga0307517_10001866 3300028786 Bacteria 34489
111 Ga0307517_10020632 3300028786 Bacteria 8382
112 Ga0265338_10008709 3300028800 Bacteria 12263
113 Ga0265338_10028201 3300028800 Bacteria 5605
114 Ga0265338_10044475 3300028800 Bacteria 4099
115 Ga0265338_10067144 3300028800 Bacteria 3099
116 Ga0307511_10014641 3300030521 Bacteria 7629
117 Ga0265327_10000166 3300031251 Bacteria 141539
118 Ga0265327_10004410 3300031251 Bacteria 12485
119 Ga0265327_10004508 3300031251 Bacteria 12291
120 Ga0307513_10000181 3300031456 Bacteria 91264
121 Ga0307513_10001569 3300031456 Bacteria 32781
122 Ga0307513_10005989 3300031456 Bacteria 15965
123 Ga0307516_10000004 3300031730 Bacteria 367451
124 Ga0373927_0001060 3300035695 Bacteria 20988
125 Ga0373925_0000039 3300037068 Bacteria 138537
126 Ga0373925_0170115 3300037068 Bacteria 1720
127 Ga0395899_0000100 3300037312 Bacteria 151710
128 Ga0395900_0000009 3300037418 Bacteria 476249
129 Ga0395900_0007233 3300037418 Bacteria 11499
130 Ga0395898_0002693 3300037466 Bacteria 20548
131 Ga0395898_0155876 3300037466 Bacteria 2184
132 Ga0395905_0044276 3300037471 Bacteria 4177
133 Ga0395901_0000014 3300038443 Bacteria 375100
134 Ga0395901_0064075 3300038443 Bacteria 3825
135 Ga0436365_1281841 3300039437 Bacteria 4231
136 Ga0436365_1573894 3300039437 Bacteria 40649
137 Ga0436365_1695015 3300039437 Bacteria 2373
138 Ga0436360_0682573 3300039438 Bacteria 3022
139 Ga0436361_0655108 3300039447 Bacteria 35382
140 Ga0439445_0009715 3300042004 Bacteria 2269
141 Ga0495642_0007243 3300046528 Bacteria 4258
142 Ga0495609_0013227 3300046538 Bacteria 3902
143 Ga0495597_0006698 3300046542 Bacteria 5931
144 Ga0495645_0075264 3300046543 Bacteria 2430
145 Ga0495622_0004757 3300046557 Bacteria 6286
146 Ga0495669_0000114 3300046684 Bacteria 52644
147 Ga0495669_0000375 3300046684 Bacteria 22695
148 Ga0495669_0038234 3300046684 Bacteria 2125
149 Ga0495613_0002023 3300046689 Bacteria 15400
150 Ga0495581_0022641 3300047315 Bacteria 3640
151 Ga0495672_0068765 3300047320 Bacteria 2012
152 Ga0495687_016315 3300047443 Bacteria 3737
153 Ga0495677_0007404 3300047445 Bacteria 4106
154 Ga0495686_0003284 3300047472 Bacteria 14140
155 Ga0496102_0164986 3300048905 Bacteria 2084
156 Ga0496106_0092015 3300048909 Bacteria 2342
157 Ga0496115_0000727 3300048918 Bacteria 24368
158 Ga0496115_0014482 3300048918 Bacteria 5971
159 Ga0496118_0021896 3300048921 Bacteria 5606
160 Ga0496121_0000009 3300048924 Bacteria 836971
161 Ga0501047_0000805 3300049581 Bacteria 32767
162 Ga0501047_0118015 3300049581 Bacteria 2535
163 Ga0501044_0017266 3300049823 Bacteria 7740
164 nmdc:mga06z11_4274_c1 3300050494 Bacteria 5608
165 nmdc:mga07m45_20953_c1 3300050496 Bacteria 3555
166 Ga0500635_0000054 3300053080 Bacteria 74486
167 Ga0500643_011480 3300053087 Bacteria 3231
168 Ga0500651_0032582 3300053093 Bacteria 3284
169 Ga0500566_0008158 3300053094 Bacteria 6196
170 Ga0500641_0010508 3300053096 Bacteria 3346
171 Ga0500555_000776 3300053103 Bacteria 11719
172 Ga0500572_001483 3300053111 Bacteria 6337
173 Ga0500595_001580 3300053119 Bacteria 12021
174 Ga0500608_000677 3300053122 Bacteria 12474
175 Ga0500642_0061577 3300053130 Bacteria 1686
176 Ga0500559_0000040 3300053136 Bacteria 106740
177 Ga0500559_0018914 3300053136 Bacteria 2910
178 Ga0500619_000364 3300053154 Bacteria 8485
179 Ga0500636_0008259 3300053177 Bacteria 6039
180 Ga0500637_0024884 3300053178 Bacteria 3283
181 Ga0500645_000749 3300053730 Bacteria 19921
182 2644000078 2643221598 Bacteria 4578346
183 2644085103 2643221614 Bacteria 4260023
184 2644342655 2643221661 Bacteria 4267604
185 2644365955 2643221666 Bacteria 4265935
186 Ga0068865_100001323
187 Ga0055530_10000559
188 Ga0055531_10001956
189 Ga0055531_10018192
190 Ga0065165_1000277
191 Ga0070670_100000039
192 Ga0070670_100036354
193 Ga0070670_100054017
194 Ga0070680_100003371
195 Ga0070660_100008620
196 Ga0070691_10012652
197 Ga0070668_100000605
198 Ga0070668_100003765
199 Ga0070668_100005679
200 Ga0070671_100073331
201 Ga0070659_100006179
202 Ga0070659_100013772
203 Ga0070667_100001045
204 Ga0070681_10095042
205 Ga0070679_100021748
206 Ga0070665_100000327
207 Ga0070665_100000801
208 Ga0070665_100000934
209 Ga0068859_100005005
210 Ga0068859_100122932
211 Ga0068864_100000462
212 Ga0068864_100000521
213 Ga0068864_100068562
214 Ga0068863_100000007
215 Ga0068863_100003983
216 Ga0068858_100000031
217 Ga0068858_100033379
218 Ga0068860_100000128
219 Ga0068860_100000139
220 Ga0068862_100000121
221 Ga0068862_100002991
222 Ga0068862_100020961
223 Ga0068862_100087734
224 Ga0075368_10007127
225 Ga0075367_10000368
226 Ga0097620_100005005
227 Ga0097620_100122932
228 Ga0105240_10001061
229 Ga0105240_10003509
230 Ga0105240_10061285
231 Ga0105245_10067983
232 Ga0105248_10000559
233 Ga0105248_10005115
234 Ga0105248_10027236
235 Ga0105248_10212522
236 Ga0105238_10010241
237 Ga0105249_10000890
238 Ga0105239_10039199
239 Ga0157372_10051047
240 Ga0163163_10005169
241 Ga0163163_10038671
242 Ga0157379_10000697
243 Ga0157379_10032615
244 Ga0213876_10000252
245 Ga0209026_1000744
246 Ga0209758_1000920
247 Ga0209050_1000200
248 Ga0209257_1000225
249 Ga0209257_1000514
250 Ga0207705_10004697
251 Ga0207707_10034428
252 Ga0207695_10000728
253 Ga0207695_10002233
254 Ga0207695_10007649
255 Ga0207657_10011754
256 Ga0207657_10051476
257 Ga0207652_10006483
258 Ga0207681_10009366
259 Ga0207694_10090758
260 Ga0207650_10000099
261 Ga0207650_10035607
262 Ga0207644_10000460
263 Ga0207690_10000288
264 Ga0207704_10002947
265 Ga0207711_10001408
266 Ga0207711_10006196
267 Ga0207711_10030667
268 Ga0207711_10054436
269 Ga0207667_10006492
270 Ga0207667_10020622
271 Ga0207668_10000046
272 Ga0207668_10000465
273 Ga0207668_10011498
274 Ga0207658_10000106
275 Ga0207703_10000038
276 Ga0207703_10003531
277 Ga0207703_10011431
278 Ga0207639_10025884
279 Ga0207641_10000012
280 Ga0207641_10001351
281 Ga0207641_10022014
282 Ga0207676_10000119
283 Ga0207676_10000360
284 Ga0207676_10103621
285 Ga0207698_10123850
286 Ga0268266_10000064
287 Ga0268266_10000636
288 Ga0268266_10017199
289 Ga0268265_10002082
290 Ga0268265_10003418
291 Ga0268265_10049183
292 Ga0268264_10000046
293 Ga0268264_10000059
294 Ga0265318_10019139
295 Ga0307517_10001866
296 Ga0307517_10020632
297 Ga0265338_10008709
298 Ga0265338_10028201
299 Ga0265338_10044475
300 Ga0265338_10067144
301 Ga0307511_10014641
302 Ga0265327_10000166
303 Ga0265327_10004410
304 Ga0265327_10004508
305 Ga0307513_10000181
306 Ga0307513_10001569
307 Ga0307513_10005989
308 Ga0307516_10000004
309 Ga0373927_0001060
310 Ga0373925_0000039
311 Ga0373925_0170115
312 Ga0395899_0000100
313 Ga0395900_0000009
314 Ga0395900_0007233
315 Ga0395898_0002693
316 Ga0395898_0155876
317 Ga0395905_0044276
318 Ga0395901_0000014
319 Ga0395901_0064075
320 Ga0436365_1281841
321 Ga0436365_1573894
322 Ga0436365_1695015
323 Ga0436360_0682573
324 Ga0436361_0655108
325 Ga0439445_0009715
326 Ga0495642_0007243
327 Ga0495609_0013227
328 Ga0495597_0006698
329 Ga0495645_0075264
330 Ga0495622_0004757
331 Ga0495669_0000114
332 Ga0495669_0000375
333 Ga0495669_0038234
334 Ga0495613_0002023
335 Ga0495581_0022641
336 Ga0495672_0068765
337 Ga0495687_016315
338 Ga0495677_0007404
339 Ga0495686_0003284
340 Ga0496102_0164986
341 Ga0496106_0092015
342 Ga0496115_0000727
343 Ga0496115_0014482
344 Ga0496118_0021896
345 Ga0496121_0000009
346 Ga0501047_0000805
347 Ga0501047_0118015
348 Ga0501044_0017266
349 nmdc:mga06z11_4274_c1
350 nmdc:mga07m45_20953_c1
351 Ga0500635_0000054
352 Ga0500643_011480
353 Ga0500651_0032582
354 Ga0500566_0008158
355 Ga0500641_0010508
356 Ga0500555_000776
357 Ga0500572_001483
358 Ga0500595_001580
359 Ga0500608_000677
360 Ga0500642_0061577
361 Ga0500559_0000040
362 Ga0500559_0018914
363 Ga0500619_000364
364 Ga0500636_0008259
365 Ga0500637_0024884
366 Ga0500645_000749
367 2644000078
368 2644085103
369 2644342655
370 2644365955

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17768

RecJ_OB

RecJ OB domain

498

606

0.96

PF02272

DHHA1

DHHA1 domain

355

483

0.89

PF01368

DHH

DHH family

101

262

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lrd-assembly1.cif.gz_A structure of recj complexed with a 5'-p-dspacer-modified ssdna 0.8599 22 592
5f56-assembly1.cif.gz_A structure of recj complexed with dna and ssb-ct 0.8506 22 592
2zxp-assembly1.cif.gz_A crystal structure of recj in complex with mn2+ from thermus thermophilus hb8 0.8455 22 598
3kdf-assembly3.cif.gz_D x-ray crystal structure of the human replication protein a complex from wheat germ cell free expression 0.8379 514 596
5f54-assembly1.cif.gz_A structure of recj complexed with dtmp 0.8299 20 593
ID Description Score Start End Superfamily
5f56A03 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.9582 346 470 3.10.310.30
af_P21893_50_326_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9541 73 343 3.90.1640.30
af_Q2FXT9_57_316_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9432 73 343 3.90.1640.30
af_Q2FXT9_57_316_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9328 73 343 3.90.1640.30
af_P21893_50_326_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9307 73 343 3.90.1640.30
ID Description Score Start End GO Terms
AF-A0A4Q3TJJ7-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.965 1 364 GO:0004527
AF-A0A4Q3TJJ7-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9624 1 364 GO:0004527
AF-A0A350KP93-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9556 6 363 GO:0004527
AF-A0A7V0UAA7-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9518 22 364 GO:0004527
AF-A0A388PYR0-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9498 15 275 GO:0004527
GO:0016020

Map