F284906

General Info

Members Datasets Scaffolds Average Seq Length
185 132 370 520

Family's Representative Sequence

Representative Sequence 3300046538|Ga0495609_0017328|Ga0495609_0017328_452_2176
Length 574
Sequence MGFTTKFLALIIIFLFCIIFICFEMFCSVTSISETEVEHLNFTNMMSNERNKIIEGLADSNTVWDVIIVGGGATGLGTALDAASRGYKTLLLEQIDFAKGTSSRSTKLAHGGVRYLAQGDIGLVVEALHERGLMLKNAAHLVKNESFIIPNYEWWGGIFYTIGLTLYDLLAGKWGFGRAKYISKKEVARRLPTIQQKGLYGGVVYHDGQFDDSRLAVNIAQTSLEQGATVLNYFKVTNLVKDAQGRVAGVVTTDTETGTSYTVKGKTVINATGVFADEILQMDKPGNRAMLRPSQGIHLVVDMSFMPAEDALMIPKTSDGRVLFAVPWHDKLVIGTTDTPLTQHSLEPLALDEEIEFIMRTADQYLVKAPARKDVLSMFAGLRPLAAPQGGSEKTKEISRSHKIFVSDSGLITITGGKWTTYRKMAEDTVNKAIEVGKLVKRPVKTKDLPIHGSTPIVDRNNHLYVYGSDRDAVLALVNENKAWGEKLHPRAEYIAAEVVWAVRHEMARTLEDVLARRVRILFLDARMAIDVAPKVAALIAAELKKDAQWEKEQTDTFIALAKTYLLEPYPLPA

Samples

Sample ID Description Type Environment
1 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
99 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
111 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
120 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
121 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
122 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
125 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
126 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
127 2738541283 Pedobacter sp. OK701 Isolate Unclassified
128 2738541284 Pedobacter sp. YR016 Isolate Unclassified
129 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
130 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
131 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
132 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.76
Metatranscriptomes 0
Isolates 3.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.32
Nodule 0
Rhizoplane 0.54
Rhizosphere 87.57
Stem 0
Stem Tuber 0
Unclassified 2.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495609_0017328 3300046538 Bacteria 3344
2 SwRhRL2b_contig_3584547 2162886007 Bacteria 2516
3 SwRhRL2b_contig_639718 2162886007 Bacteria 1883
4 JGI24744J21845_10002004 3300002077 Bacteria 4118
5 JGI25162J39368_1000022 3300002737 Bacteria 239510
6 rootH2_10000823 3300003320 Bacteria 101452
7 rootH1_10151545 3300003323 Bacteria 4960
8 Ga0065714_10064583 3300005288 Bacteria 32320
9 Ga0065704_10074395 3300005289 Bacteria 6304
10 Ga0065704_10086599 3300005289 Bacteria 3102
11 Ga0065712_10005399 3300005290 Bacteria 4184
12 Ga0070670_100047023 3300005331 Bacteria 3712
13 Ga0068869_100153756 3300005334 Bacteria 1786
14 Ga0070689_100007087 3300005340 Bacteria 7807
15 Ga0070668_100054060 3300005347 Bacteria 3097
16 Ga0070669_100002930 3300005353 Bacteria 12298
17 Ga0070673_100002153 3300005364 Bacteria 11938
18 Ga0070673_100016899 3300005364 Bacteria 5174
19 Ga0070688_100019589 3300005365 Bacteria 3922
20 Ga0070714_100194138 3300005435 Bacteria 1854
21 Ga0068867_100153905 3300005459 Bacteria 1808
22 Ga0068853_100004534 3300005539 Bacteria 10778
23 Ga0070665_100000012 3300005548 Bacteria 508937
24 Ga0068855_100000026 3300005563 Bacteria 175140
25 Ga0068855_100001018 3300005563 Bacteria 34919
26 Ga0068855_100077304 3300005563 Bacteria 3862
27 Ga0068857_100055963 3300005577 Bacteria 3500
28 Ga0068854_100067518 3300005578 Bacteria 2605
29 Ga0068856_100000015 3300005614 Bacteria 157353
30 Ga0068856_100008226 3300005614 Bacteria 10167
31 Ga0068852_100023605 3300005616 Bacteria 4953
32 Ga0068859_100034367 3300005617 Bacteria 5088
33 Ga0068859_100085036 3300005617 Bacteria 3208
34 Ga0068864_100074883 3300005618 Bacteria 2954
35 Ga0068861_100007928 3300005719 Bacteria 7306
36 Ga0068870_10005653 3300005840 Bacteria 5469
37 Ga0068863_100096139 3300005841 Bacteria 2812
38 Ga0068858_100003012 3300005842 Bacteria 16898
39 Ga0068860_100150499 3300005843 Bacteria 2241
40 Ga0068862_100009176 3300005844 Bacteria 8193
41 Ga0075366_10012315 3300006195 Bacteria 4849
42 Ga0068871_100000569 3300006358 Bacteria 25274
43 Ga0075429_100054603 3300006880 Unclassified 3475
44 Ga0068865_100000098 3300006881 Bacteria 45185
45 Ga0097620_100034369 3300006931 Bacteria 5088
46 Ga0097620_100085038 3300006931 Bacteria 3208
47 Ga0105240_10002523 3300009093 Bacteria 29393
48 Ga0105240_10004044 3300009093 Bacteria 22562
49 Ga0105240_10017980 3300009093 Bacteria 9510
50 Ga0105240_10063603 3300009093 Bacteria 4589
51 Ga0111539_10028248 3300009094 Bacteria 6847
52 Ga0105243_10000004 3300009148 Bacteria 601266
53 Ga0105248_10035734 3300009177 Bacteria 5558
54 Ga0105237_10000088 3300009545 Bacteria 124518
55 Ga0105237_10000354 3300009545 Bacteria 64712
56 Ga0105237_10001433 3300009545 Bacteria 31542
57 Ga0105237_10044448 3300009545 Bacteria 4472
58 Ga0105237_10092995 3300009545 Bacteria 3005
59 Ga0105238_10001410 3300009551 Bacteria 24084
60 Ga0105238_10187042 3300009551 Bacteria 2047
61 Ga0105249_10060162 3300009553 Unclassified 3484
62 Ga0105239_10000042 3300010375 Bacteria 199662
63 Ga0105239_10000094 3300010375 Bacteria 124925
64 Ga0105239_10061710 3300010375 Bacteria 4114
65 Ga0105239_10124286 3300010375 Bacteria 2867
66 Ga0157373_10005541 3300013100 Bacteria 9465
67 Ga0157373_10089863 3300013100 Bacteria 2163
68 Ga0157371_10003209 3300013102 Bacteria 15016
69 Ga0157370_10002986 3300013104 Bacteria 20118
70 Ga0157370_10004909 3300013104 Bacteria 15153
71 Ga0157370_10007577 3300013104 Bacteria 11787
72 Ga0157370_10013318 3300013104 Bacteria 8471
73 Ga0157369_10011004 3300013105 Bacteria 10298
74 Ga0157369_10011572 3300013105 Bacteria 10016
75 Ga0157369_10015370 3300013105 Bacteria 8632
76 Ga0157378_10069248 3300013297 Bacteria 3165
77 Ga0163162_10000013 3300013306 Bacteria 275366
78 Ga0163162_10002445 3300013306 Bacteria 17518
79 Ga0163162_10047898 3300013306 Bacteria 4283
80 Ga0157372_10004590 3300013307 Bacteria 14688
81 Ga0157372_10022709 3300013307 Bacteria 6790
82 Ga0157372_10023887 3300013307 Bacteria 6632
83 Ga0157372_10109036 3300013307 Unclassified 3170
84 Ga0157375_10002218 3300013308 Bacteria 16810
85 Ga0157375_10027746 3300013308 Bacteria 5297
86 Ga0157375_10063672 3300013308 Bacteria 3670
87 Ga0163163_10000598 3300014325 Bacteria 31471
88 Ga0157380_10005319 3300014326 Bacteria 8996
89 Ga0182008_10000002 3300014497 Bacteria 480216
90 Ga0182008_10000053 3300014497 Bacteria 102934
91 Ga0157377_10002189 3300014745 Bacteria 8597
92 Ga0157379_10017042 3300014968 Bacteria 6396
93 Ga0157379_10131542 3300014968 Bacteria 2253
94 Ga0157376_10006996 3300014969 Bacteria 8002
95 Ga0157376_10075552 3300014969 Bacteria 2876
96 Ga0182006_1041328 3300015261 Bacteria 1810
97 Ga0163161_10010076 3300017792 Bacteria 6542
98 Ga0163161_10026158 3300017792 Bacteria 4134
99 Ga0163161_10036765 3300017792 Bacteria 3507
100 Ga0209437_100024 3300025233 Bacteria 592878
101 Ga0209455_1001713 3300025272 Bacteria 9390
102 Ga0207645_10059789 3300025907 Bacteria 2434
103 Ga0207643_10018158 3300025908 Bacteria 3853
104 Ga0207695_10004466 3300025913 Bacteria 19054
105 Ga0207695_10007478 3300025913 Bacteria 13876
106 Ga0207695_10116504 3300025913 Bacteria 2645
107 Ga0207671_10002636 3300025914 Bacteria 18871
108 Ga0207671_10005983 3300025914 Bacteria 11005
109 Ga0207671_10044097 3300025914 Bacteria 3298
110 Ga0207657_10097760 3300025919 Bacteria 2441
111 Ga0207681_10054864 3300025923 Bacteria 2711
112 Ga0207659_10039214 3300025926 Bacteria 3302
113 Ga0207644_10023666 3300025931 Bacteria 4210
114 Ga0207706_10022379 3300025933 Bacteria 5673
115 Ga0207709_10000010 3300025935 Bacteria 601305
116 Ga0207670_10004471 3300025936 Bacteria 7531
117 Ga0207704_10000334 3300025938 Bacteria 21818
118 Ga0207691_10000285 3300025940 Bacteria 49947
119 Ga0207667_10000022 3300025949 Bacteria 369570
120 Ga0207667_10135826 3300025949 Bacteria 2533
121 Ga0207712_10016671 3300025961 Bacteria 4761
122 Ga0207703_10123383 3300026035 Bacteria 2227
123 Ga0207639_10003841 3300026041 Bacteria 10123
124 Ga0207702_10035669 3300026078 Bacteria 4158
125 Ga0207648_10008540 3300026089 Bacteria 9910
126 Ga0207648_10027786 3300026089 Bacteria 5019
127 Ga0207674_10005257 3300026116 Bacteria 15410
128 Ga0207674_10214756 3300026116 Bacteria 1872
129 Ga0207675_100000085 3300026118 Bacteria 73716
130 Ga0207698_10012636 3300026142 Bacteria 5533
131 Ga0268266_10000080 3300028379 Bacteria 210179
132 Ga0268265_10085312 3300028380 Bacteria 2506
133 Ga0268264_10066623 3300028381 Bacteria 3037
134 Ga0307517_10019437 3300028786 Bacteria 8716
135 Ga0307515_10000010 3300028794 Bacteria 651586
136 Ga0307515_10000820 3300028794 Bacteria 71586
137 Ga0307515_10003704 3300028794 Bacteria 32078
138 Ga0265339_10000079 3300031249 Bacteria 83641
139 Ga0265327_10000099 3300031251 Bacteria 190474
140 Ga0307509_10148186 3300031507 Bacteria 2268
141 Ga0265314_10001365 3300031711 Bacteria 27500
142 Ga0307409_100034956 3300031995 Unclassified 3678
143 Ga0307416_100000927 3300032002 Bacteria 15505
144 Ga0307415_100009665 3300032126 Bacteria 5423
145 Ga0307507_10000034 3300033179 Bacteria 188697
146 Ga0307510_10000218 3300033180 Bacteria 51022
147 Ga0373941_0006551 3300035115 Bacteria 2811
148 Ga0395899_0010962 3300037312 Bacteria 6944
149 Ga0395899_0013441 3300037312 Bacteria 6262
150 Ga0395900_0000507 3300037418 Bacteria 54887
151 Ga0395900_0063821 3300037418 Bacteria 3786
152 Ga0395900_0171105 3300037418 Bacteria 2211
153 Ga0395898_0122347 3300037466 Bacteria 2493
154 Ga0395898_0174294 3300037466 Bacteria 2056
155 Ga0395905_0001895 3300037471 Bacteria 24123
156 Ga0395901_0006474 3300038443 Bacteria 11860
157 Ga0400483_171674 3300039062 Bacteria 31831
158 Ga0451576_0208966 3300045051 Bacteria 2038
159 Ga0466967_0054003 3300045976 Bacteria 3534
160 Ga0495585_0000400 3300046492 Bacteria 41942
161 Ga0495616_0024678 3300046513 Bacteria 3222
162 Ga0495648_0009747 3300046524 Bacteria 7398
163 Ga0495654_0028908 3300046530 Bacteria 2831
164 Ga0495633_0000067 3300046558 Bacteria 139122
165 Ga0495625_0000375 3300046660 Bacteria 68361
166 Ga0495625_0000735 3300046660 Bacteria 45909
167 Ga0495625_0032230 3300046660 Bacteria 3890
168 Ga0495625_0094580 3300046660 Bacteria 2061
169 Ga0495670_0084469 3300046691 Bacteria 1620
170 Ga0495686_0000098 3300047472 Bacteria 183131
171 Ga0496101_0013240 3300048904 Bacteria 5524
172 Ga0496122_0008296 3300048925 Bacteria 11261
173 Ga0496123_0008004 3300048926 Bacteria 9792
174 Ga0501241_000252 3300049758 Bacteria 11959
175 nmdc:mga0k408_858_c1 3300050493 Bacteria 16731
176 nmdc:mga08y16_126254_c1 3300050511 Unclassified 2661
177 Ga0500608_007890 3300053122 Bacteria 4433
178 Ga0500618_000026 3300053125 Bacteria 148672
179 Ga0500624_000467 3300053157 Bacteria 12039
180 2738756010 2738541283 Bacteria 7222293
181 2738762050 2738541284 Bacteria 5199923
182 2833643230 2833640130 Bacteria 4858325
183 2910250657 2910245624 Bacteria 6935613
184 2919441743 2919437846 Bacteria 6199444
185 8055589331 8055588893 Bacteria 3619545
186 Ga0495609_0017328
187 SwRhRL2b_contig_3584547
188 SwRhRL2b_contig_639718
189 JGI24744J21845_10002004
190 JGI25162J39368_1000022
191 rootH2_10000823
192 rootH1_10151545
193 Ga0065714_10064583
194 Ga0065704_10074395
195 Ga0065704_10086599
196 Ga0065712_10005399
197 Ga0070670_100047023
198 Ga0068869_100153756
199 Ga0070689_100007087
200 Ga0070668_100054060
201 Ga0070669_100002930
202 Ga0070673_100002153
203 Ga0070673_100016899
204 Ga0070688_100019589
205 Ga0070714_100194138
206 Ga0068867_100153905
207 Ga0068853_100004534
208 Ga0070665_100000012
209 Ga0068855_100000026
210 Ga0068855_100001018
211 Ga0068855_100077304
212 Ga0068857_100055963
213 Ga0068854_100067518
214 Ga0068856_100000015
215 Ga0068856_100008226
216 Ga0068852_100023605
217 Ga0068859_100034367
218 Ga0068859_100085036
219 Ga0068864_100074883
220 Ga0068861_100007928
221 Ga0068870_10005653
222 Ga0068863_100096139
223 Ga0068858_100003012
224 Ga0068860_100150499
225 Ga0068862_100009176
226 Ga0075366_10012315
227 Ga0068871_100000569
228 Ga0075429_100054603
229 Ga0068865_100000098
230 Ga0097620_100034369
231 Ga0097620_100085038
232 Ga0105240_10002523
233 Ga0105240_10004044
234 Ga0105240_10017980
235 Ga0105240_10063603
236 Ga0111539_10028248
237 Ga0105243_10000004
238 Ga0105248_10035734
239 Ga0105237_10000088
240 Ga0105237_10000354
241 Ga0105237_10001433
242 Ga0105237_10044448
243 Ga0105237_10092995
244 Ga0105238_10001410
245 Ga0105238_10187042
246 Ga0105249_10060162
247 Ga0105239_10000042
248 Ga0105239_10000094
249 Ga0105239_10061710
250 Ga0105239_10124286
251 Ga0157373_10005541
252 Ga0157373_10089863
253 Ga0157371_10003209
254 Ga0157370_10002986
255 Ga0157370_10004909
256 Ga0157370_10007577
257 Ga0157370_10013318
258 Ga0157369_10011004
259 Ga0157369_10011572
260 Ga0157369_10015370
261 Ga0157378_10069248
262 Ga0163162_10000013
263 Ga0163162_10002445
264 Ga0163162_10047898
265 Ga0157372_10004590
266 Ga0157372_10022709
267 Ga0157372_10023887
268 Ga0157372_10109036
269 Ga0157375_10002218
270 Ga0157375_10027746
271 Ga0157375_10063672
272 Ga0163163_10000598
273 Ga0157380_10005319
274 Ga0182008_10000002
275 Ga0182008_10000053
276 Ga0157377_10002189
277 Ga0157379_10017042
278 Ga0157379_10131542
279 Ga0157376_10006996
280 Ga0157376_10075552
281 Ga0182006_1041328
282 Ga0163161_10010076
283 Ga0163161_10026158
284 Ga0163161_10036765
285 Ga0209437_100024
286 Ga0209455_1001713
287 Ga0207645_10059789
288 Ga0207643_10018158
289 Ga0207695_10004466
290 Ga0207695_10007478
291 Ga0207695_10116504
292 Ga0207671_10002636
293 Ga0207671_10005983
294 Ga0207671_10044097
295 Ga0207657_10097760
296 Ga0207681_10054864
297 Ga0207659_10039214
298 Ga0207644_10023666
299 Ga0207706_10022379
300 Ga0207709_10000010
301 Ga0207670_10004471
302 Ga0207704_10000334
303 Ga0207691_10000285
304 Ga0207667_10000022
305 Ga0207667_10135826
306 Ga0207712_10016671
307 Ga0207703_10123383
308 Ga0207639_10003841
309 Ga0207702_10035669
310 Ga0207648_10008540
311 Ga0207648_10027786
312 Ga0207674_10005257
313 Ga0207674_10214756
314 Ga0207675_100000085
315 Ga0207698_10012636
316 Ga0268266_10000080
317 Ga0268265_10085312
318 Ga0268264_10066623
319 Ga0307517_10019437
320 Ga0307515_10000010
321 Ga0307515_10000820
322 Ga0307515_10003704
323 Ga0265339_10000079
324 Ga0265327_10000099
325 Ga0307509_10148186
326 Ga0265314_10001365
327 Ga0307409_100034956
328 Ga0307416_100000927
329 Ga0307415_100009665
330 Ga0307507_10000034
331 Ga0307510_10000218
332 Ga0373941_0006551
333 Ga0395899_0010962
334 Ga0395899_0013441
335 Ga0395900_0000507
336 Ga0395900_0063821
337 Ga0395900_0171105
338 Ga0395898_0122347
339 Ga0395898_0174294
340 Ga0395905_0001895
341 Ga0395901_0006474
342 Ga0400483_171674
343 Ga0451576_0208966
344 Ga0466967_0054003
345 Ga0495585_0000400
346 Ga0495616_0024678
347 Ga0495648_0009747
348 Ga0495654_0028908
349 Ga0495633_0000067
350 Ga0495625_0000375
351 Ga0495625_0000735
352 Ga0495625_0032230
353 Ga0495625_0094580
354 Ga0495670_0084469
355 Ga0495686_0000098
356 Ga0496101_0013240
357 Ga0496122_0008296
358 Ga0496123_0008004
359 Ga0501241_000252
360 nmdc:mga0k408_858_c1
361 nmdc:mga08y16_126254_c1
362 Ga0500608_007890
363 Ga0500618_000026
364 Ga0500624_000467
365 2738756010
366 2738762050
367 2833643230
368 2910250657
369 2919441743
370 8055589331

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

65

128

0.86

PF16901

DAO_C

C-terminal domain of alpha-glycerophosphate oxidase

412

554

0.86

PF01266

DAO

FAD dependent oxidoreductase

65

423

0.77

PF12831

FAD_oxidored

FAD dependent oxidoreductase

65

274

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bkd-assembly1.cif.gz_a formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodislfide reductase core and mobile arm in conformational state 1, composite structure) 0.9563 22 53
5ocm-assembly1.cif.gz_A imine reductase from streptosporangium roseum in complex with nadp+ and 2,2,2-trifluoroacetophenone hydrate 0.9233 20 49
6fqz-assembly1.cif.gz_B plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor nadp+ and in complex with its substrate 6-phosphogluconate 0.9098 21 51
7wnn-assembly1.cif.gz_A crystal structure of imine reductase from actinoalloteichus hymeniacidonis in complex with nadph 0.9083 21 53
8jku-assembly1.cif.gz_A ancestral imine reductase n559 0.9083 21 49
ID Description Score Start End Superfamily
af_Q4DG35_95_220_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9555 424 520 1.10.8.870
af_Q9DBM2_291_471_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9553 22 51 3.40.50.720
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.932 23 53 3.50.50.60
af_O97245_528_652_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9273 418 519 1.10.8.870
af_A0A1D8PMP1_486_641_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.918 424 521 1.10.8.870
ID Description Score Start End GO Terms
AF-A0A1Q4G5S3-F1-model_v4 FAD-dependent oxidoreductase 0.988 1 525 GO:0004368
GO:0046168
AF-A0A357JG47-F1-model_v4 FAD-dependent oxidoreductase 0.9865 4 523 GO:0004368
GO:0046168
AF-A0A1N6Z5X5-F1-model_v4 Glycerol-3-phosphate dehydrogenase 0.9863 7 525 GO:0004368
GO:0046168
AF-A0A3G2G6N6-F1-model_v4 Glycerol-3-phosphate dehydrogenase/oxidase 0.9862 7 525 GO:0004368
GO:0046168
AF-A0A1H8K4P8-F1-model_v4 Glycerol-3-phosphate dehydrogenase 0.9852 4 525 GO:0004368
GO:0046168

Map