F285124

General Info

Members Datasets Scaffolds Average Seq Length
185 137 371 330

Family's Representative Sequence

Representative Sequence 3300053156|Ga0500622_0009826|Ga0500622_0009826_356_1459
Length 367
Sequence LIVFQRIDNQGEYKQNYLLKNILYISGIETTVVLKIDSHTHILPKKLPNWTEKFGYGDFIYLQHHKKGFAKMMRGNQFFREIKENAWNPELRIREYEKFHTQVQVVCTIPVMFSYWANPLDCLDLSRFLNDHLAELVLKYPQNYLGLATIPMQDAELAIVELERCKQIGLSGVQIGSNINDLNLNEPRFYPIFEACEKLGMAMLVHPWNMMGQKQMQRYWLPWLVGMPAETSRAICSMIFGGIFEKLPQLRVNFAHAGGSFLPTIGRIQHGYDCRPDLVVIDNMHPPKDYLGRFWVDSVTHDPLMLEYVLKTLGSKRITLGSDYPFPLGDLEIGQYIEDMNLDDGVKEDIFYKAALEWLDLKKERFT

Samples

Sample ID Description Type Environment
1 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
98 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
99 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
100 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
111 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
117 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
118 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
119 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
120 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
121 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
122 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
123 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
124 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
127 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
131 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
132 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
133 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
134 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
135 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
136 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
137 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.92
Metatranscriptomes 0
Isolates 1.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.19
Nodule 0
Rhizoplane 1.08
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 8.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500622_0009826 3300053156 Bacteria 5282
2 JGI25406J46586_10002819 3300003203 Bacteria 8177
3 rootH1_10000284 3300003316 Bacteria 58926
4 rootH2_10000321 3300003320 Bacteria 84740
5 rootL2_10001244 3300003322 Bacteria 13257
6 rootL2_10009100 3300003322 Bacteria 9845
7 rootL2_10132146 3300003322 Bacteria 8273
8 rootH1_10000712 3300003316 Bacteria 27638
9 rootH1_10000712 3300003323 Bacteria 88392
10 rootH1_10033562 3300003323 Bacteria 3078
11 rootH1_10112786 3300003323 Bacteria 18142
12 Ga0055531_10000087 3300003794 Bacteria 101553
13 Ga0065165_1001451 3300005262 Bacteria 25653
14 Ga0065707_10129913 3300005295 Bacteria 1939
15 Ga0070676_10071348 3300005328 Bacteria 2086
16 Ga0070676_10150182 3300005328 Bacteria 1491
17 Ga0070670_100076169 3300005331 Bacteria 2882
18 Ga0070670_100085064 3300005331 Bacteria 2717
19 Ga0068869_100066241 3300005334 Bacteria 2660
20 Ga0070682_100000005 3300005337 Bacteria 386439
21 Ga0070689_100384997 3300005340 Bacteria 1183
22 Ga0070669_100001238 3300005353 Bacteria 18500
23 Ga0070671_100026953 3300005355 Unclassified 4727
24 Ga0070671_100198927 3300005355 Bacteria 1699
25 Ga0070673_100002836 3300005364 Bacteria 10670
26 Ga0070688_100003767 3300005365 Bacteria 7856
27 Ga0070694_100052859 3300005444 Bacteria 2747
28 Ga0070678_100200077 3300005456 Bacteria 1648
29 Ga0070662_100006364 3300005457 Bacteria 7605
30 Ga0068867_100018175 3300005459 Bacteria 4996
31 Ga0068867_100110510 3300005459 Bacteria 2111
32 Ga0070698_100303362 3300005471 Bacteria 1528
33 Ga0070699_100142521 3300005518 Unclassified 2117
34 Ga0068853_100083121 3300005539 Unclassified 2805
35 Ga0070672_100285861 3300005543 Bacteria 1395
36 Ga0068855_100252204 3300005563 Bacteria 1968
37 Ga0070664_100027889 3300005564 Unclassified 4696
38 Ga0068857_100195223 3300005577 Bacteria 1844
39 Ga0070702_100175777 3300005615 Bacteria 1397
40 Ga0068852_100232385 3300005616 Bacteria 1758
41 Ga0068859_100236093 3300005617 Bacteria 1917
42 Ga0068861_100009559 3300005719 Bacteria 6699
43 Ga0068861_100010538 3300005719 Bacteria 6418
44 Ga0068870_10007286 3300005840 Bacteria 4927
45 Ga0068863_100256542 3300005841 Bacteria 1690
46 Ga0068858_100444547 3300005842 Bacteria 1249
47 Ga0068862_100022129 3300005844 Bacteria 5320
48 Ga0081539_10000037 3300005985 Bacteria 296160
49 Ga0070716_100054457 3300006173 Bacteria 2285
50 Ga0075366_10017779 3300006195 Bacteria 4099
51 Ga0097621_100209547 3300006237 Bacteria 1695
52 Ga0075428_100000041 3300006844 Bacteria 102565
53 Ga0075428_100037309 3300006844 Bacteria 5351
54 Ga0075430_100018740 3300006846 Bacteria 5890
55 Ga0075430_100145271 3300006846 Bacteria 1976
56 Ga0075431_100002546 3300006847 Bacteria 17595
57 Ga0075433_10021029 3300006852 Bacteria 5466
58 Ga0075429_100000878 3300006880 Bacteria 23738
59 Ga0097620_100236091 3300006931 Bacteria 1917
60 Ga0111539_10007760 3300009094 Bacteria 13703
61 Ga0111539_10066396 3300009094 Bacteria 4261
62 Ga0114129_10377259 3300009147 Bacteria 1874
63 Ga0105249_10005718 3300009553 Bacteria 10751
64 Ga0105246_10396884 3300011119 Bacteria 1144
65 Ga0157373_10211860 3300013100 Bacteria 1366
66 Ga0157371_10011568 3300013102 Bacteria 6785
67 Ga0157370_10030982 3300013104 Bacteria 5237
68 Ga0157374_10315369 3300013296 Bacteria 1549
69 Ga0157378_10101314 3300013297 Bacteria 2630
70 Ga0163162_10005134 3300013306 Bacteria 12619
71 Ga0163162_10090940 3300013306 Bacteria 3134
72 Ga0157372_10000901 3300013307 Bacteria 32275
73 Ga0157375_10190663 3300013308 Bacteria 2205
74 Ga0157380_10000027 3300014326 Bacteria 101082
75 Ga0157380_10004279 3300014326 Bacteria 9885
76 Ga0157380_10005627 3300014326 Bacteria 8758
77 Ga0157380_10030959 3300014326 Unclassified 4103
78 Ga0157380_10051918 3300014326 Bacteria 3245
79 Ga0157380_10082748 3300014326 Bacteria 2628
80 Ga0157380_10329812 3300014326 Bacteria 1419
81 Ga0157377_10000827 3300014745 Bacteria 12822
82 Ga0209050_1012659 3300025298 Bacteria 3841
83 Ga0209050_1017002 3300025298 Bacteria 2933
84 Ga0209257_1000006 3300025304 Bacteria 1570111
85 Ga0207688_10017289 3300025901 Unclassified 3919
86 Ga0207645_10071503 3300025907 Bacteria 2220
87 Ga0207643_10011996 3300025908 Unclassified 4679
88 Ga0207650_10137401 3300025925 Bacteria 1919
89 Ga0207659_10266552 3300025926 Bacteria 1396
90 Ga0207706_10010994 3300025933 Bacteria 8252
91 Ga0207665_10041868 3300025939 Bacteria 3061
92 Ga0207691_10176204 3300025940 Bacteria 1870
93 Ga0207689_10204420 3300025942 Bacteria 1631
94 Ga0207679_10023050 3300025945 Unclassified 4250
95 Ga0207679_10356165 3300025945 Bacteria 1277
96 Ga0207667_10215183 3300025949 Bacteria 1969
97 Ga0207639_10104940 3300026041 Bacteria 2292
98 Ga0207708_10216805 3300026075 Bacteria 1532
99 Ga0207641_10234561 3300026088 Bacteria 1707
100 Ga0207648_10031485 3300026089 Bacteria 4690
101 Ga0207674_10123695 3300026116 Bacteria 2553
102 Ga0207674_10607487 3300026116 Bacteria 1056
103 Ga0207675_100000762 3300026118 Bacteria 32039
104 Ga0207675_100002685 3300026118 Bacteria 17555
105 Ga0207675_100377487 3300026118 Bacteria 1393
106 Ga0207683_10031618 3300026121 Bacteria 4593
107 Ga0207428_10036791 3300027907 Bacteria 3988
108 Ga0268265_10032886 3300028380 Bacteria 3764
109 Ga0307515_10000010 3300028794 Bacteria 651586
110 Ga0307515_10000681 3300028794 Bacteria 78150
111 Ga0307515_10088313 3300028794 Bacteria 3920
112 Ga0265327_10000219 3300031251 Bacteria 116606
113 Ga0265327_10009514 3300031251 Bacteria 6998
114 Ga0307513_10088049 3300031456 Bacteria 3175
115 Ga0307509_10017961 3300031507 Bacteria 8122
116 Ga0307509_10263166 3300031507 Bacteria 1498
117 Ga0307408_100170152 3300031548 Bacteria 1739
118 Ga0307514_10078433 3300031649 Bacteria 2453
119 Ga0307413_10366461 3300031824 Unclassified 1117
120 Ga0307406_10048950 3300031901 Bacteria 2673
121 Ga0307411_10017073 3300032005 Bacteria 4124
122 Ga0307411_10159879 3300032005 Bacteria 1686
123 Ga0307415_100084988 3300032126 Bacteria 2272
124 Ga0395899_0000040 3300037312 Bacteria 261561
125 Ga0395905_0000001 3300037471 Bacteria 2037079
126 Ga0436364_0100627 3300037853 Bacteria 2062
127 Ga0451791_0412068 3300041451 Bacteria 1135
128 Ga0451843_0224169 3300041509 Bacteria 1548
129 Ga0450899_002868 3300042135 Bacteria 1865
130 Ga0439434_0009537 3300042435 Bacteria 2856
131 Ga0451577_0014603 3300042876 Bacteria 7317
132 Ga0451577_0015488 3300042876 Bacteria 7094
133 Ga0451577_0032947 3300042876 Bacteria 4670
134 Ga0451577_0291680 3300042876 Unclassified 1478
135 Ga0453683_0019283 3300044673 Bacteria 4371
136 Ga0453683_0209734 3300044673 Bacteria 1237
137 Ga0453684_0003210 3300044712 Bacteria 37486
138 Ga0453684_0025914 3300044712 Bacteria 8491
139 Ga0451576_0000002 3300045051 Bacteria 1670975
140 Ga0451576_0006463 3300045051 Bacteria 14370
141 Ga0451576_0020174 3300045051 Bacteria 7262
142 Ga0451576_0056214 3300045051 Bacteria 4117
143 Ga0451576_0115403 3300045051 Bacteria 2796
144 Ga0495638_0000003 3300046460 Bacteria 888792
145 Ga0495638_0031019 3300046460 Bacteria 3437
146 Ga0495594_0036249 3300046499 Bacteria 2689
147 Ga0495630_0167350 3300046517 Bacteria 1674
148 Ga0495668_0000097 3300046616 Bacteria 139246
149 Ga0495634_0095923 3300046642 Bacteria 1921
150 Ga0495625_0159690 3300046660 Bacteria 1511
151 Ga0495635_0278094 3300046663 Bacteria 1125
152 Ga0495686_0000261 3300047472 Bacteria 94540
153 Ga0496114_0001407 3300048917 Bacteria 18259
154 Ga0501034_0000115 3300049571 Bacteria 146825
155 Ga0501047_0113778 3300049581 Bacteria 2588
156 Ga0501202_007724 3300049652 Bacteria 1948
157 Ga0501257_002600 3300049686 Unclassified 3804
158 Ga0501257_037376 3300049686 Bacteria 1184
159 Ga0501261_004319 3300049690 Unclassified 1752
160 Ga0501219_000283 3300049703 Bacteria 9024
161 Ga0501225_0017775 3300049705 Bacteria 1973
162 Ga0501225_0045753 3300049705 Unclassified 1212
163 Ga0501241_000757 3300049758 Bacteria 6943
164 Ga0501264_001321 3300049761 Bacteria 2723
165 Ga0501284_00041 3300050005 Bacteria 50589
166 nmdc:mga0k408_79861_c1 3300050493 Bacteria 1914
167 nmdc:mga05p37_244397_c1 3300050507 Bacteria 2156
168 nmdc:mga05p37_3306_c1 3300050507 Bacteria 18809
169 nmdc:mga09592_212638_c1 3300050508 Bacteria 1676
170 nmdc:mga09592_854_c1 3300050508 Bacteria 23738
171 nmdc:mga0qj67_14788_c1 3300050509 Bacteria 5900
172 nmdc:mga0qj67_184834_c1 3300050509 Bacteria 1693
173 nmdc:mga0qj67_26445_c1 3300050509 Bacteria 4492
174 nmdc:mga06r32_482_c2 3300050510 Bacteria 32195
175 nmdc:mga08y16_117260_c1 3300050511 Bacteria 2771
176 Ga0500583_0013856 3300053092 Unclassified 3136
177 Ga0500651_0165428 3300053093 Unclassified 1321
178 Ga0500568_0004712 3300053139 Bacteria 7234
179 Ga0500616_0000007 3300053153 Bacteria 836875
180 Ga0500616_0060879 3300053153 Bacteria 1956
181 Ga0500622_0000006 3300053156 Bacteria 464021
182 Ga0500622_0000213 3300053156 Bacteria 61430
183 Ga0500627_0004139 3300053158 Bacteria 4607
184 Ga0500611_000077 3300053727 Bacteria 38126
185 2673162363 2671180531 Bacteria 9045424
186 2881956470 2881955468 Bacteria 3545609
187 Ga0500622_0009826
188 JGI25406J46586_10002819
189 rootH1_10000284
190 rootH2_10000321
191 rootL2_10001244
192 rootL2_10009100
193 rootL2_10132146
194 rootH1_10000712
195 rootH1_10033562
196 rootH1_10112786
197 Ga0055531_10000087
198 Ga0065165_1001451
199 Ga0065707_10129913
200 Ga0070676_10071348
201 Ga0070676_10150182
202 Ga0070670_100076169
203 Ga0070670_100085064
204 Ga0068869_100066241
205 Ga0070682_100000005
206 Ga0070689_100384997
207 Ga0070669_100001238
208 Ga0070671_100026953
209 Ga0070671_100198927
210 Ga0070673_100002836
211 Ga0070688_100003767
212 Ga0070694_100052859
213 Ga0070678_100200077
214 Ga0070662_100006364
215 Ga0068867_100018175
216 Ga0068867_100110510
217 Ga0070698_100303362
218 Ga0070699_100142521
219 Ga0068853_100083121
220 Ga0070672_100285861
221 Ga0068855_100252204
222 Ga0070664_100027889
223 Ga0068857_100195223
224 Ga0070702_100175777
225 Ga0068852_100232385
226 Ga0068859_100236093
227 Ga0068861_100009559
228 Ga0068861_100010538
229 Ga0068870_10007286
230 Ga0068863_100256542
231 Ga0068858_100444547
232 Ga0068862_100022129
233 Ga0081539_10000037
234 Ga0070716_100054457
235 Ga0075366_10017779
236 Ga0097621_100209547
237 Ga0075428_100000041
238 Ga0075428_100037309
239 Ga0075430_100018740
240 Ga0075430_100145271
241 Ga0075431_100002546
242 Ga0075433_10021029
243 Ga0075429_100000878
244 Ga0097620_100236091
245 Ga0111539_10007760
246 Ga0111539_10066396
247 Ga0114129_10377259
248 Ga0105249_10005718
249 Ga0105246_10396884
250 Ga0157373_10211860
251 Ga0157371_10011568
252 Ga0157370_10030982
253 Ga0157374_10315369
254 Ga0157378_10101314
255 Ga0163162_10005134
256 Ga0163162_10090940
257 Ga0157372_10000901
258 Ga0157375_10190663
259 Ga0157380_10000027
260 Ga0157380_10004279
261 Ga0157380_10005627
262 Ga0157380_10030959
263 Ga0157380_10051918
264 Ga0157380_10082748
265 Ga0157380_10329812
266 Ga0157377_10000827
267 Ga0209050_1012659
268 Ga0209050_1017002
269 Ga0209257_1000006
270 Ga0207688_10017289
271 Ga0207645_10071503
272 Ga0207643_10011996
273 Ga0207650_10137401
274 Ga0207659_10266552
275 Ga0207706_10010994
276 Ga0207665_10041868
277 Ga0207691_10176204
278 Ga0207689_10204420
279 Ga0207679_10023050
280 Ga0207679_10356165
281 Ga0207667_10215183
282 Ga0207639_10104940
283 Ga0207708_10216805
284 Ga0207641_10234561
285 Ga0207648_10031485
286 Ga0207674_10123695
287 Ga0207674_10607487
288 Ga0207675_100000762
289 Ga0207675_100002685
290 Ga0207675_100377487
291 Ga0207683_10031618
292 Ga0207428_10036791
293 Ga0268265_10032886
294 Ga0307515_10000010
295 Ga0307515_10000681
296 Ga0307515_10088313
297 Ga0265327_10000219
298 Ga0265327_10009514
299 Ga0307513_10088049
300 Ga0307509_10017961
301 Ga0307509_10263166
302 Ga0307408_100170152
303 Ga0307514_10078433
304 Ga0307413_10366461
305 Ga0307406_10048950
306 Ga0307411_10017073
307 Ga0307411_10159879
308 Ga0307415_100084988
309 Ga0395899_0000040
310 Ga0395905_0000001
311 Ga0436364_0100627
312 Ga0451791_0412068
313 Ga0451843_0224169
314 Ga0450899_002868
315 Ga0439434_0009537
316 Ga0451577_0014603
317 Ga0451577_0015488
318 Ga0451577_0032947
319 Ga0451577_0291680
320 Ga0453683_0019283
321 Ga0453683_0209734
322 Ga0453684_0003210
323 Ga0453684_0025914
324 Ga0451576_0000002
325 Ga0451576_0006463
326 Ga0451576_0020174
327 Ga0451576_0056214
328 Ga0451576_0115403
329 Ga0495638_0000003
330 Ga0495638_0031019
331 Ga0495594_0036249
332 Ga0495630_0167350
333 Ga0495668_0000097
334 Ga0495634_0095923
335 Ga0495625_0159690
336 Ga0495635_0278094
337 Ga0495686_0000261
338 Ga0496114_0001407
339 Ga0501034_0000115
340 Ga0501047_0113778
341 Ga0501202_007724
342 Ga0501257_002600
343 Ga0501257_037376
344 Ga0501261_004319
345 Ga0501219_000283
346 Ga0501225_0017775
347 Ga0501225_0045753
348 Ga0501241_000757
349 Ga0501264_001321
350 Ga0501284_00041
351 nmdc:mga0k408_79861_c1
352 nmdc:mga05p37_244397_c1
353 nmdc:mga05p37_3306_c1
354 nmdc:mga09592_212638_c1
355 nmdc:mga09592_854_c1
356 nmdc:mga0qj67_14788_c1
357 nmdc:mga0qj67_184834_c1
358 nmdc:mga0qj67_26445_c1
359 nmdc:mga06r32_482_c2
360 nmdc:mga08y16_117260_c1
361 Ga0500583_0013856
362 Ga0500651_0165428
363 Ga0500568_0004712
364 Ga0500616_0000007
365 Ga0500616_0060879
366 Ga0500622_0000006
367 Ga0500622_0000213
368 Ga0500627_0004139
369 Ga0500611_000077
370 2673162363
371 2881956470

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04909

Amidohydro_2

Amidohydrolase

36

361

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ign-assembly2.cif.gz_B 2.32 angstrom x-ray crystal structure of r47a mutant of human acmsd 0.9881 1 329
4ign-assembly2.cif.gz_B 2.32 angstrom x-ray crystal structure of r47a mutant of human acmsd 0.9852 1 329
4ofc-assembly1.cif.gz_A 2.0 angstroms x-ray crystal structure of human 2-amino-3-carboxymuconate-6-semialdehye decarboxylase 0.9839 1 328
4ofc-assembly1.cif.gz_A 2.0 angstroms x-ray crystal structure of human 2-amino-3-carboxymuconate-6-semialdehye decarboxylase 0.978 1 328
7pwy-assembly2.cif.gz_C structure of human dimeric acmsd in complex with the inhibitor tes-1025 0.9771 2 328
ID Description Score Start End Superfamily
4ofcD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9856 1 328 3.20.20.140
4ofcD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9797 1 328 3.20.20.140
4eraA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9615 2 326 3.20.20.140
4eraA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9473 2 326 3.20.20.140
4lalD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8595 1 328 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A4Q3USS2-F1-model_v4 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) (Picolinate carboxylase) 0.9968 1 227 GO:0005829
GO:0016787
GO:0016831
GO:0019748
AF-A0A1S9CVB0-F1-model_v4 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) (Picolinate carboxylase) 0.9963 66 328 GO:0005829
GO:0016787
GO:0016831
GO:0019748
AF-A0A1E4L9U1-F1-model_v4 deleted 0.9938 53 328
AF-A0A3M1A0R6-F1-model_v4 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) (Picolinate carboxylase) 0.9935 93 329 GO:0005829
GO:0016020
GO:0016787
GO:0016831
GO:0019748
AF-A0A522R520-F1-model_v4 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) (Picolinate carboxylase) 0.9932 110 328 GO:0005829
GO:0016787
GO:0016831
GO:0019748

Map