F286529

General Info

Members Datasets Scaffolds Average Seq Length
186 137 372 255

Family's Representative Sequence

Representative Sequence 3300046517|Ga0495630_0001225|Ga0495630_0001225_4515_5375
Length 286
Sequence MSGSVLARVRLLQARLLPQGWLDVLRQVALFAAAYLAYRLVRGLAEGDAGAAFAHARDLISLERATHLFVEPSIQAWASSSRVLMGFSSWLYVNAQTTVTVAALVYLYVRHNRNFYFVRNMFMIAMFIALVGYTVFPTAPPRFMPEWGFIDSVSDFTGVRVSHSSASMTALFNPYAAVPSMHVAFALMIGWPLARLARRRFVSVLWLLYPLLMAFVIVVTANHFIVDALLGALTAGASAYGAMWLARTRPAVWRFAGAPASAPAAAGWSSPAGASAFAAAHDGTRG

Samples

Sample ID Description Type Environment
1 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
36 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
39 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
64 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
65 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
66 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
67 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
68 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
75 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
80 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
88 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
89 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
90 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
91 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
92 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
97 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
98 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
102 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
117 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
130 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
134 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
135 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.92
Metatranscriptomes 1.08
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.84
Nodule 0
Rhizoplane 20.43
Rhizosphere 73.66
Stem 0
Stem Tuber 0
Unclassified 3.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495630_0001225 3300046517 Bacteria 17729
2 Ga0070683_100172046 3300005329 Bacteria 2056
3 Ga0070690_100464204 3300005330 Bacteria 941
4 Ga0070682_100063040 3300005337 Bacteria 2349
5 Ga0070671_100220047 3300005355 Bacteria 1611
6 Ga0070659_100313796 3300005366 Bacteria 1309
7 Ga0070709_10211199 3300005434 Bacteria 1380
8 Ga0070714_100063622 3300005435 Bacteria 3173
9 Ga0070710_10068516 3300005437 Bacteria 2039
10 Ga0070711_100000637 3300005439 Bacteria 18301
11 Ga0070684_100309697 3300005535 Bacteria 1450
12 Ga0070684_100344692 3300005535 Bacteria 1370
13 Ga0068856_100027346 3300005614 Bacteria 5565
14 Ga0070702_100388161 3300005615 Archaea 995
15 Ga0068852_100025636 3300005616 Bacteria 4780
16 Ga0068852_100152925 3300005616 Bacteria 2147
17 Ga0068859_100386037 3300005617 Unclassified 1496
18 Ga0068870_10190120 3300005840 Archaea 1238
19 Ga0068863_100445272 3300005841 Bacteria 1271
20 Ga0081455_10009088 3300005937 Bacteria 10251
21 Ga0081455_10098869 3300005937 Bacteria 2348
22 Ga0081540_1000535 3300005983 Bacteria 36758
23 Ga0081539_10011180 3300005985 Bacteria 7148
24 Ga0075365_10179738 3300006038 Bacteria 1479
25 Ga0075363_100115909 3300006048 Bacteria 1492
26 Ga0075363_100207920 3300006048 Bacteria 1119
27 Ga0070712_100014849 3300006175 Bacteria 5005
28 Ga0070712_100266504 3300006175 Bacteria 1374
29 Ga0070712_100318672 3300006175 Bacteria 1264
30 Ga0075367_10132945 3300006178 Bacteria 1538
31 Ga0075428_100600496 3300006844 Bacteria 1175
32 Ga0075430_100035065 3300006846 Bacteria 4259
33 Ga0097620_100385999 3300006931 Unclassified 1496
34 Ga0105240_10005215 3300009093 Bacteria 19441
35 Ga0111539_11079912 3300009094 Bacteria 933
36 Ga0105237_10025339 3300009545 Bacteria 6066
37 Ga0105239_10579640 3300010375 Bacteria 1279
38 Ga0163162_10533294 3300013306 Bacteria 1303
39 Ga0163162_11294928 3300013306 Unclassified 828
40 Ga0157372_10747374 3300013307 Bacteria 1137
41 Ga0157372_10951468 3300013307 Bacteria 996
42 Ga0157375_10328203 3300013308 Bacteria 1695
43 Ga0157377_10502992 3300014745 Bacteria 847
44 Ga0206356_11035735 3300020070 Unclassified 1122
45 Ga0206349_1229399 3300020075 Bacteria 2343
46 Ga0207426_1072753 3300025302 Bacteria 953
47 Ga0207692_10011585 3300025898 Bacteria 3759
48 Ga0207692_10240730 3300025898 Bacteria 1080
49 Ga0207642_10103892 3300025899 Bacteria 1432
50 Ga0207688_10111223 3300025901 Bacteria 1590
51 Ga0207699_10024182 3300025906 Bacteria 3318
52 Ga0207695_10003355 3300025913 Bacteria 22624
53 Ga0207671_10005574 3300025914 Bacteria 11557
54 Ga0207693_10061591 3300025915 Bacteria 2939
55 Ga0207693_10320867 3300025915 Bacteria 1213
56 Ga0207663_10000426 3300025916 Bacteria 18302
57 Ga0207657_10071038 3300025919 Bacteria 2949
58 Ga0207649_10156926 3300025920 Bacteria 1573
59 Ga0207681_10165253 3300025923 Bacteria 1673
60 Ga0207687_10082258 3300025927 Bacteria 2329
61 Ga0207664_10572318 3300025929 Unclassified 1014
62 Ga0207690_10427274 3300025932 Bacteria 1061
63 Ga0207704_10134053 3300025938 Bacteria 1721
64 Ga0207689_10204023 3300025942 Bacteria 1632
65 Ga0207661_10098031 3300025944 Bacteria 2456
66 Ga0207668_10148262 3300025972 Bacteria 1813
67 Ga0207640_10669001 3300025981 Unclassified 887
68 Ga0207677_10077319 3300026023 Bacteria 2373
69 Ga0207639_10585005 3300026041 Bacteria 1028
70 Ga0207678_10414839 3300026067 Bacteria 1167
71 Ga0207683_10286643 3300026121 Bacteria 1505
72 Ga0207698_10084094 3300026142 Bacteria 2578
73 Ga0207698_10092682 3300026142 Bacteria 2478
74 Ga0265337_1002425 3300028556 Bacteria 8576
75 Ga0265326_10000385 3300028558 Bacteria 18004
76 Ga0265319_1000458 3300028563 Bacteria 28965
77 Ga0265334_10095355 3300028573 Bacteria 1082
78 Ga0265318_10000825 3300028577 Bacteria 20474
79 Ga0265336_10000001 3300028666 Bacteria 916179
80 Ga0265338_10000004 3300028800 Bacteria 644793
81 Ga0265338_10019015 3300028800 Bacteria 7317
82 Ga0265324_10031053 3300029957 Bacteria 1873
83 Ga0265340_10000002 3300031247 Bacteria 711693
84 Ga0265327_10005341 3300031251 Bacteria 10761
85 Ga0265327_10043362 3300031251 Bacteria 2407
86 Ga0265327_10085736 3300031251 Bacteria 1546
87 Ga0265342_10097546 3300031712 Bacteria 1678
88 Ga0316576_10355229 3300031727 Bacteria 1090
89 Ga0307410_10088490 3300031852 Bacteria 2193
90 Ga0307410_10701135 3300031852 Bacteria 853
91 Ga0307410_10714011 3300031852 Bacteria 846
92 Ga0307406_10260468 3300031901 Bacteria 1312
93 Ga0307411_10197541 3300032005 Bacteria 1542
94 Ga0307415_100033894 3300032126 Bacteria 3318
95 Ga0316574_0088157 3300035398 Bacteria 1976
96 Ga0373947_0044116 3300035725 Bacteria 2664
97 Ga0316584_0142183 3300036712 Bacteria 1789
98 Ga0436365_1605536 3300039437 Bacteria 1666
99 Ga0466965_0095525 3300044683 Bacteria 1516
100 Ga0466963_0022333 3300044694 Bacteria 4006
101 Ga0466960_0065704 3300044901 Bacteria 1792
102 Ga0466960_0279467 3300044901 Unclassified 935
103 Ga0466967_0031759 3300045976 Bacteria 4451
104 Ga0495641_0016616 3300046461 Bacteria 3868
105 Ga0495653_0010808 3300046463 Bacteria 7471
106 Ga0495664_0000029 3300046477 Bacteria 96330
107 Ga0495585_0147859 3300046492 Bacteria 1227
108 Ga0495608_0106280 3300046511 Bacteria 1807
109 Ga0495618_0000108 3300046514 Bacteria 60531
110 Ga0495645_0000018 3300046543 Bacteria 155263
111 Ga0495645_0000091 3300046543 Bacteria 63295
112 Ga0495611_0129025 3300046648 Bacteria 1180
113 Ga0495657_0000016 3300046675 Bacteria 183127
114 Ga0495599_0061249 3300046678 Bacteria 2352
115 Ga0495581_0096165 3300047315 Bacteria 1720
116 Ga0495604_0000624 3300047317 Bacteria 30428
117 Ga0495604_0154383 3300047317 Bacteria 1628
118 Ga0495676_0067014 3300047321 Bacteria 2779
119 Ga0495684_0019706 3300047471 Bacteria 5198
120 Ga0495684_0177730 3300047471 Bacteria 1579
121 Ga0496100_0012136 3300048903 Bacteria 4928
122 Ga0496100_0061099 3300048903 Bacteria 2482
123 Ga0496100_0151354 3300048903 Bacteria 1655
124 Ga0496101_0003901 3300048904 Bacteria 9319
125 Ga0496101_0182460 3300048904 Bacteria 1617
126 Ga0496101_0362631 3300048904 Bacteria 1139
127 Ga0496102_0000099 3300048905 Bacteria 123625
128 Ga0496102_0676150 3300048905 Bacteria 955
129 Ga0496103_0000016 3300048906 Bacteria 266127
130 Ga0496103_0084348 3300048906 Bacteria 2001
131 Ga0496103_0141448 3300048906 Bacteria 1539
132 Ga0496104_0000006 3300048907 Bacteria 536446
133 Ga0496104_0080335 3300048907 Bacteria 3109
134 Ga0496104_0091718 3300048907 Bacteria 2904
135 Ga0496106_0001105 3300048909 Bacteria 19947
136 Ga0496106_0008627 3300048909 Bacteria 7542
137 Ga0496106_0469612 3300048909 Bacteria 1011
138 Ga0496107_0006169 3300048910 Bacteria 8232
139 Ga0496107_0125879 3300048910 Bacteria 1890
140 Ga0496108_0005325 3300048911 Bacteria 10393
141 Ga0496108_0016958 3300048911 Bacteria 5953
142 Ga0496109_0001916 3300048912 Bacteria 17274
143 Ga0496109_0640742 3300048912 Bacteria 1000
144 Ga0496110_0000785 3300048913 Bacteria 22145
145 Ga0496110_0003621 3300048913 Bacteria 11884
146 Ga0496111_0000340 3300048914 Bacteria 23301
147 Ga0496111_0009082 3300048914 Bacteria 6617
148 Ga0496111_0072564 3300048914 Bacteria 2505
149 Ga0496112_0521008 3300048915 Bacteria 1123
150 Ga0496113_0014294 3300048916 Bacteria 5412
151 Ga0496113_0040650 3300048916 Bacteria 3428
152 Ga0496114_0119364 3300048917 Bacteria 2267
153 Ga0496114_0235877 3300048917 Bacteria 1608
154 Ga0496114_0387521 3300048917 Bacteria 1237
155 Ga0496114_0706448 3300048917 Bacteria 884
156 Ga0496115_0000884 3300048918 Bacteria 21818
157 Ga0496115_0002240 3300048918 Bacteria 13856
158 Ga0496115_0005827 3300048918 Bacteria 8976
159 Ga0496121_0127292 3300048924 Bacteria 1913
160 Ga0501031_0188089 3300049568 Bacteria 1348
161 Ga0501034_0273475 3300049571 Bacteria 1630
162 Ga0501039_0036495 3300049575 Bacteria 3793
163 Ga0501041_0018585 3300049577 Bacteria 4140
164 Ga0501042_0081703 3300049578 Bacteria 2316
165 Ga0501067_0086716 3300049583 Bacteria 1737
166 Ga0501070_0049672 3300049586 Bacteria 3483
167 Ga0501070_0215734 3300049586 Bacteria 1574
168 Ga0501070_0267507 3300049586 Bacteria 1396
169 Ga0501071_0151842 3300049587 Bacteria 1728
170 Ga0501072_0150186 3300049588 Bacteria 1857
171 Ga0501074_0169373 3300049590 Bacteria 1559
172 Ga0501074_0246648 3300049590 Bacteria 1270
173 Ga0501075_0276866 3300049591 Bacteria 1279
174 Ga0501080_0065264 3300049742 Bacteria 3386
175 nmdc:mga03n38_111631_c1 3300050490 Bacteria 1332
176 nmdc:mga03n38_84831_c1 3300050490 Bacteria 1496
177 nmdc:mga00v17_61717_c1 3300050491 Bacteria 2304
178 nmdc:mga0qj67_1748_c1 3300050509 Bacteria 15355
179 nmdc:mga06r32_181977_c1 3300050510 Bacteria 2087
180 Ga0495601_0000753 3300053077 Bacteria 17457
181 Ga0495601_0036882 3300053077 Bacteria 3055
182 Ga0495612_0000027 3300053078 Bacteria 100974
183 Ga0500568_0059420 3300053139 Bacteria 1483
184 Ga0501084_0735560 3300054114 Bacteria 831
185 Ga0530510_0063141 3300061734 Bacteria 2682
186 Ga0530510_0278700 3300061734 Bacteria 1249
187 Ga0495630_0001225
188 Ga0070683_100172046
189 Ga0070690_100464204
190 Ga0070682_100063040
191 Ga0070671_100220047
192 Ga0070659_100313796
193 Ga0070709_10211199
194 Ga0070714_100063622
195 Ga0070710_10068516
196 Ga0070711_100000637
197 Ga0070684_100309697
198 Ga0070684_100344692
199 Ga0068856_100027346
200 Ga0070702_100388161
201 Ga0068852_100025636
202 Ga0068852_100152925
203 Ga0068859_100386037
204 Ga0068870_10190120
205 Ga0068863_100445272
206 Ga0081455_10009088
207 Ga0081455_10098869
208 Ga0081540_1000535
209 Ga0081539_10011180
210 Ga0075365_10179738
211 Ga0075363_100115909
212 Ga0075363_100207920
213 Ga0070712_100014849
214 Ga0070712_100266504
215 Ga0070712_100318672
216 Ga0075367_10132945
217 Ga0075428_100600496
218 Ga0075430_100035065
219 Ga0097620_100385999
220 Ga0105240_10005215
221 Ga0111539_11079912
222 Ga0105237_10025339
223 Ga0105239_10579640
224 Ga0163162_10533294
225 Ga0163162_11294928
226 Ga0157372_10747374
227 Ga0157372_10951468
228 Ga0157375_10328203
229 Ga0157377_10502992
230 Ga0206356_11035735
231 Ga0206349_1229399
232 Ga0207426_1072753
233 Ga0207692_10011585
234 Ga0207692_10240730
235 Ga0207642_10103892
236 Ga0207688_10111223
237 Ga0207699_10024182
238 Ga0207695_10003355
239 Ga0207671_10005574
240 Ga0207693_10061591
241 Ga0207693_10320867
242 Ga0207663_10000426
243 Ga0207657_10071038
244 Ga0207649_10156926
245 Ga0207681_10165253
246 Ga0207687_10082258
247 Ga0207664_10572318
248 Ga0207690_10427274
249 Ga0207704_10134053
250 Ga0207689_10204023
251 Ga0207661_10098031
252 Ga0207668_10148262
253 Ga0207640_10669001
254 Ga0207677_10077319
255 Ga0207639_10585005
256 Ga0207678_10414839
257 Ga0207683_10286643
258 Ga0207698_10084094
259 Ga0207698_10092682
260 Ga0265337_1002425
261 Ga0265326_10000385
262 Ga0265319_1000458
263 Ga0265334_10095355
264 Ga0265318_10000825
265 Ga0265336_10000001
266 Ga0265338_10000004
267 Ga0265338_10019015
268 Ga0265324_10031053
269 Ga0265340_10000002
270 Ga0265327_10005341
271 Ga0265327_10043362
272 Ga0265327_10085736
273 Ga0265342_10097546
274 Ga0316576_10355229
275 Ga0307410_10088490
276 Ga0307410_10701135
277 Ga0307410_10714011
278 Ga0307406_10260468
279 Ga0307411_10197541
280 Ga0307415_100033894
281 Ga0316574_0088157
282 Ga0373947_0044116
283 Ga0316584_0142183
284 Ga0436365_1605536
285 Ga0466965_0095525
286 Ga0466963_0022333
287 Ga0466960_0065704
288 Ga0466960_0279467
289 Ga0466967_0031759
290 Ga0495641_0016616
291 Ga0495653_0010808
292 Ga0495664_0000029
293 Ga0495585_0147859
294 Ga0495608_0106280
295 Ga0495618_0000108
296 Ga0495645_0000018
297 Ga0495645_0000091
298 Ga0495611_0129025
299 Ga0495657_0000016
300 Ga0495599_0061249
301 Ga0495581_0096165
302 Ga0495604_0000624
303 Ga0495604_0154383
304 Ga0495676_0067014
305 Ga0495684_0019706
306 Ga0495684_0177730
307 Ga0496100_0012136
308 Ga0496100_0061099
309 Ga0496100_0151354
310 Ga0496101_0003901
311 Ga0496101_0182460
312 Ga0496101_0362631
313 Ga0496102_0000099
314 Ga0496102_0676150
315 Ga0496103_0000016
316 Ga0496103_0084348
317 Ga0496103_0141448
318 Ga0496104_0000006
319 Ga0496104_0080335
320 Ga0496104_0091718
321 Ga0496106_0001105
322 Ga0496106_0008627
323 Ga0496106_0469612
324 Ga0496107_0006169
325 Ga0496107_0125879
326 Ga0496108_0005325
327 Ga0496108_0016958
328 Ga0496109_0001916
329 Ga0496109_0640742
330 Ga0496110_0000785
331 Ga0496110_0003621
332 Ga0496111_0000340
333 Ga0496111_0009082
334 Ga0496111_0072564
335 Ga0496112_0521008
336 Ga0496113_0014294
337 Ga0496113_0040650
338 Ga0496114_0119364
339 Ga0496114_0235877
340 Ga0496114_0387521
341 Ga0496114_0706448
342 Ga0496115_0000884
343 Ga0496115_0002240
344 Ga0496115_0005827
345 Ga0496121_0127292
346 Ga0501031_0188089
347 Ga0501034_0273475
348 Ga0501039_0036495
349 Ga0501041_0018585
350 Ga0501042_0081703
351 Ga0501067_0086716
352 Ga0501070_0049672
353 Ga0501070_0215734
354 Ga0501070_0267507
355 Ga0501071_0151842
356 Ga0501072_0150186
357 Ga0501074_0169373
358 Ga0501074_0246648
359 Ga0501075_0276866
360 Ga0501080_0065264
361 nmdc:mga03n38_111631_c1
362 nmdc:mga03n38_84831_c1
363 nmdc:mga00v17_61717_c1
364 nmdc:mga0qj67_1748_c1
365 nmdc:mga06r32_181977_c1
366 Ga0495601_0000753
367 Ga0495601_0036882
368 Ga0495612_0000027
369 Ga0500568_0059420
370 Ga0501084_0735560
371 Ga0530510_0063141
372 Ga0530510_0278700

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14378

PAP2_3

PAP2 superfamily

57

241

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ipb-assembly2.cif.gz_D crystal structure of t159d mutant of s. typhimurium phon protein 0.7298 115 236
6ebu-assembly1.cif.gz_A crystal structure of aquifex aeolicus lpxe 0.6714 70 237
2akc-assembly1.cif.gz_B crystal structure of tungstate complex of the phon protein from s. typhimurium 0.6634 135 251
7f18-assembly3.cif.gz_C crystal structure of a mutant of acid phosphatase from pseudomonas aeruginosa (q57h/w58p/d135r) 0.6188 67 248
6ebu-assembly1.cif.gz_A crystal structure of aquifex aeolicus lpxe 0.6109 70 237
ID Description Score Start End Superfamily
af_A0A1D6N735_201_272_1.20.144.10 Mainly Alpha;Up-down Bundle;Vanadium-containing Chloroperoxidase; domain 1;Phosphatidic acid phosphatase type 2/haloperoxidase 0.8689 174 239 1.20.144.10
af_Q9M325_172_243_1.20.144.10 Mainly Alpha;Up-down Bundle;Vanadium-containing Chloroperoxidase; domain 1;Phosphatidic acid phosphatase type 2/haloperoxidase 0.8685 174 236 1.20.144.10
af_A0A0R4J2K6_172_243_1.20.144.10 Mainly Alpha;Up-down Bundle;Vanadium-containing Chloroperoxidase; domain 1;Phosphatidic acid phosphatase type 2/haloperoxidase 0.861 172 236 1.20.144.10
af_I1N2R0_172_243_1.20.144.10 Mainly Alpha;Up-down Bundle;Vanadium-containing Chloroperoxidase; domain 1;Phosphatidic acid phosphatase type 2/haloperoxidase 0.8578 172 239 1.20.144.10
af_Q9SH93_171_243_1.20.144.10 Mainly Alpha;Up-down Bundle;Vanadium-containing Chloroperoxidase; domain 1;Phosphatidic acid phosphatase type 2/haloperoxidase 0.8559 174 240 1.20.144.10
ID Description Score Start End GO Terms
AF-A0A7V9GTD5-F1-model_v4 Phosphatase PAP2 family protein 0.95 9 240 GO:0016020
AF-A0A6J4TI82-F1-model_v4 Inositolphosphotransferase Aur1/Ipt1 domain-containing protein 0.9349 22 246 GO:0016020
AF-A0A7V9PQF1-F1-model_v4 Phosphatase PAP2 family protein 0.934 1 229 GO:0016020
AF-A0A428YQB8-F1-model_v4 Inositolphosphotransferase Aur1/Ipt1 domain-containing protein 0.9324 20 236 GO:0016020
AF-A0A0Q6VYZ0-F1-model_v4 Inositolphosphotransferase Aur1/Ipt1 domain-containing protein 0.9311 16 246 GO:0016020

Map