F287119

General Info

Members Datasets Scaffolds Average Seq Length
187 134 374 776

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100016046|Ga0068869_1000160462
Length 841
Sequence MSVNWWCAVGQPKLNRLFIFGGSLASQVDVDASNNNKAMTAKRPFPTIQYNVPNGGKTATSKPALLIQYRPYKKAIAVFVSLIFLYSVQYGQPIVAAGQPAQLDIRTAGKNALRITLRPLSYKNEFPYSPALNESLQYPAPVISIREIKTTITKKAGAFNVQLSPAPLTIAIFNAGNQLVQRIIFENDGRLSFTTGNQPVLGMGEGGPKPLPGADWRHLPIQFDRRGELDSMQPRWQSGAYGSRNPVPMLLGTAGWGLFVASPWVLVDLKNSDRGYFIPWQPHSNNHIPQNEKNQDLNQGKGLPPIDSMLAGAYDFFVFDGHQPAALMQDFSLITGPAAMPPKWALGYMQSHRTLVNEYQMIGIADTFRNKQIPLDAVIYLGTGFAPVGWNTQQPSFDPNPVVFKRDISDFITDMHTRHVKVILHMVPWDRDKLPGLHGNIPARKDEVMDAAHIQNYWQQHLGLVNKGVDGFWPDEGDWFNLFERIKRHQLYYQGQLSAHPDIRPWSLQRNGYPGIAQWGGWVWSGDTESSWKTLEGQVAVGINYSLSTGPYWGSDIGGFYSNTETTGELYARWFQFAAFCGSFRSHGRTWRTRLPWGWGLSYMGPSEDRQPPLASELNNPLIEQVTKKYDELRYQLLPYTYTLAWEARNTGLPLMRAMWLHYPQDENVRGMGTQYLWGRDLLIAPVFEKGATSRKVYLPNGDWYDWWTNEKQRGGQTIERKVDLSTMPLYVRAGAIIPTDPVRQYTAEPITAPTTLTIYSGADGDYTLYDDDGISQDYIKQRGEWIHVQWKDKTRKLILQPGPPRGAINIARPQKFKVRVLPENMVKEINYTGKPTGISF

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
63 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
104 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
112 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
123 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
129 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
130 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
131 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
132 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
133 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
134 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.93
Metatranscriptomes 0
Isolates 1.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.63
Nodule 0
Rhizoplane 0
Rhizosphere 83.42
Stem 0
Stem Tuber 0
Unclassified 8.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100016046 3300005334 Bacteria 5041
2 JGI24743J22301_10000053 3300001991 Bacteria 10584
3 JGI24033J26618_1000042 3300002155 Bacteria 17638
4 JGI25154J39366_1000042 3300002738 Bacteria 143170
5 JGI25153J46596_10005853 3300003215 Bacteria 6371
6 rootH2_10000327 3300003320 Bacteria 51947
7 rootH2_10001404 3300003320 Bacteria 78895
8 rootH2_10014478 3300003320 Bacteria 13847
9 rootH2_10043986 3300003320 Bacteria 14600
10 rootL2_10234874 3300003322 Bacteria 2641
11 JGI25160J50197_1001434 3300003354 Bacteria 11915
12 JGI25160J50197_1004462 3300003354 Bacteria 6046
13 Ga0055526_1002734 3300003771 Bacteria 11716
14 Ga0055526_1008922 3300003771 Bacteria 4918
15 Ga0055528_1000179 3300003790 Bacteria 53605
16 Ga0065165_1000280 3300005262 Bacteria 87088
17 Ga0065715_10112032 3300005293 Unclassified 2547
18 Ga0070683_100006819 3300005329 Bacteria 9599
19 Ga0068869_100000183 3300005334 Bacteria 32160
20 Ga0070666_10000078 3300005335 Bacteria 69922
21 Ga0068868_100033004 3300005338 Bacteria 3987
22 Ga0070689_100002570 3300005340 Bacteria 11899
23 Ga0070661_100000397 3300005344 Bacteria 33690
24 Ga0070661_100008172 3300005344 Bacteria 7220
25 Ga0070671_100023475 3300005355 Bacteria 5047
26 Ga0070659_100013603 3300005366 Bacteria 6062
27 Ga0070667_100008104 3300005367 Bacteria 8714
28 Ga0070678_100006680 3300005456 Bacteria 6789
29 Ga0068867_100013212 3300005459 Bacteria 5849
30 Ga0070707_100002391 3300005468 Bacteria 17912
31 Ga0070698_100031403 3300005471 Bacteria 5507
32 Ga0070679_100030176 3300005530 Bacteria 5352
33 Ga0070684_100045594 3300005535 Bacteria 3796
34 Ga0068853_100089202 3300005539 Unclassified 2708
35 Ga0070704_100013960 3300005549 Bacteria 5005
36 Ga0068855_100001157 3300005563 Bacteria 32696
37 Ga0068855_100048588 3300005563 Bacteria 5007
38 Ga0070664_100036450 3300005564 Bacteria 4132
39 Ga0070664_100037676 3300005564 Bacteria 4066
40 Ga0068854_100015697 3300005578 Bacteria 5028
41 Ga0068856_100000202 3300005614 Bacteria 63636
42 Ga0068856_100030674 3300005614 Bacteria 5256
43 Ga0068852_100001148 3300005616 Bacteria 17515
44 Ga0068859_100000003 3300005617 Bacteria 479218
45 Ga0068859_100007240 3300005617 Bacteria 11254
46 Ga0068863_100006905 3300005841 Bacteria 11124
47 Ga0068858_100034835 3300005842 Unclassified 4669
48 Ga0068860_100001024 3300005843 Bacteria 30859
49 Ga0068860_100002159 3300005843 Bacteria 20717
50 Ga0081455_10014245 3300005937 Bacteria 7803
51 Ga0075365_10023599 3300006038 Bacteria 3870
52 Ga0075366_10002736 3300006195 Bacteria 9110
53 Ga0068871_100001628 3300006358 Bacteria 15122
54 Ga0068871_100010833 3300006358 Bacteria 6673
55 Ga0075428_100011325 3300006844 Bacteria 9923
56 Ga0075428_100076451 3300006844 Unclassified 3655
57 Ga0075430_100005996 3300006846 Bacteria 10262
58 Ga0075430_100012217 3300006846 Bacteria 7312
59 Ga0068865_100000818 3300006881 Bacteria 17540
60 Ga0097620_100000003 3300006931 Bacteria 479218
61 Ga0097620_100007240 3300006931 Bacteria 11254
62 Ga0097620_100058924 3300006931 Unclassified 3868
63 Ga0075435_100002031 3300007076 Bacteria 13243
64 Ga0105240_10000147 3300009093 Bacteria 142340
65 Ga0105240_10000168 3300009093 Bacteria 133212
66 Ga0105240_10008415 3300009093 Bacteria 14761
67 Ga0105240_10018443 3300009093 Bacteria 9369
68 Ga0105240_10028461 3300009093 Bacteria 7299
69 Ga0111539_10000117 3300009094 Bacteria 88188
70 Ga0111539_10000332 3300009094 Bacteria 57943
71 Ga0111539_10004698 3300009094 Bacteria 17856
72 Ga0111539_10045668 3300009094 Bacteria 5243
73 Ga0111539_10066472 3300009094 Unclassified 4259
74 Ga0105245_10058959 3300009098 Unclassified 3456
75 Ga0105247_10013303 3300009101 Unclassified 4939
76 Ga0114129_10001429 3300009147 Bacteria 32259
77 Ga0105241_10005898 3300009174 Bacteria 9038
78 Ga0105241_10006474 3300009174 Bacteria 8633
79 Ga0105237_10002292 3300009545 Bacteria 23786
80 Ga0105237_10004181 3300009545 Bacteria 16811
81 Ga0105239_10000896 3300010375 Bacteria 42315
82 Ga0105239_10067891 3300010375 Unclassified 3918
83 Ga0157370_10001053 3300013104 Bacteria 34691
84 Ga0157370_10003222 3300013104 Bacteria 19271
85 Ga0157374_10000002 3300013296 Bacteria 1054226
86 Ga0157378_10036674 3300013297 Bacteria 4339
87 Ga0157372_10000894 3300013307 Bacteria 32388
88 Ga0157375_10032951 3300013308 Unclassified 4918
89 Ga0157375_10106849 3300013308 Bacteria 2891
90 Ga0157379_10040255 3300014968 Unclassified 4170
91 Ga0157376_10000543 3300014969 Bacteria 24254
92 Ga0209646_1000017 3300025246 Bacteria 488265
93 Ga0209673_1000014 3300025273 Bacteria 537082
94 Ga0209673_1000018 3300025273 Bacteria 458281
95 Ga0209758_1004251 3300025297 Bacteria 12112
96 Ga0209050_1000481 3300025298 Bacteria 70155
97 Ga0207426_1000418 3300025302 Bacteria 70035
98 Ga0207426_1001281 3300025302 Bacteria 21820
99 Ga0209257_1004554 3300025304 Bacteria 10613
100 Ga0207680_10000102 3300025903 Bacteria 39308
101 Ga0207645_10000306 3300025907 Bacteria 41222
102 Ga0207695_10000023 3300025913 Bacteria 657903
103 Ga0207695_10000031 3300025913 Bacteria 526801
104 Ga0207695_10000110 3300025913 Bacteria 250079
105 Ga0207671_10013026 3300025914 Bacteria 6652
106 Ga0207671_10043624 3300025914 Bacteria 3316
107 Ga0207649_10000113 3300025920 Bacteria 68458
108 Ga0207649_10006734 3300025920 Bacteria 6243
109 Ga0207646_10008217 3300025922 Bacteria 10489
110 Ga0207650_10034686 3300025925 Bacteria 3660
111 Ga0207690_10009106 3300025932 Bacteria 5890
112 Ga0207670_10014440 3300025936 Bacteria 4688
113 Ga0207704_10000834 3300025938 Bacteria 13648
114 Ga0207704_10036502 3300025938 Bacteria 2828
115 Ga0207689_10001868 3300025942 Bacteria 19941
116 Ga0207689_10006315 3300025942 Bacteria 10498
117 Ga0207661_10010354 3300025944 Bacteria 6711
118 Ga0207679_10022720 3300025945 Bacteria 4276
119 Ga0207667_10000144 3300025949 Bacteria 108295
120 Ga0207667_10003062 3300025949 Bacteria 20722
121 Ga0207667_10047115 3300025949 Bacteria 4564
122 Ga0207712_10019908 3300025961 Unclassified 4389
123 Ga0207703_10024221 3300026035 Unclassified 4775
124 Ga0207639_10050660 3300026041 Unclassified 3154
125 Ga0207702_10000909 3300026078 Bacteria 30703
126 Ga0207702_10027426 3300026078 Bacteria 4730
127 Ga0207641_10000026 3300026088 Bacteria 245091
128 Ga0207648_10001977 3300026089 Bacteria 22375
129 Ga0207648_10002657 3300026089 Bacteria 19075
130 Ga0207648_10029203 3300026089 Bacteria 4890
131 Ga0207676_10021930 3300026095 Unclassified 4692
132 Ga0207674_10006611 3300026116 Bacteria 13626
133 Ga0207683_10000574 3300026121 Bacteria 34037
134 Ga0207428_10000122 3300027907 Bacteria 106165
135 Ga0268264_10000614 3300028381 Bacteria 42551
136 Ga0268264_10016604 3300028381 Bacteria 6028
137 Ga0268264_10084551 3300028381 Bacteria 2721
138 Ga0307515_10000780 3300028794 Bacteria 73338
139 Ga0307511_10000264 3300030521 Bacteria 54303
140 Ga0307509_10022235 3300031507 Bacteria 7156
141 Ga0307408_100010440 3300031548 Bacteria 6126
142 Ga0307406_10013927 3300031901 Bacteria 4617
143 Ga0307414_10000003 3300032004 Bacteria 519751
144 Ga0395899_0001717 3300037312 Bacteria 18207
145 Ga0395905_0000030 3300037471 Bacteria 289430
146 Ga0395905_0003970 3300037471 Bacteria 15563
147 Ga0395901_0004335 3300038443 Bacteria 14316
148 Ga0436365_1195956 3300039437 Bacteria 11309
149 Ga0466972_0000004 3300044658 Bacteria 314413
150 Ga0466971_0000155 3300044719 Bacteria 25574
151 Ga0466970_0003819 3300044765 Bacteria 7377
152 Ga0495641_0015496 3300046461 Bacteria 4065
153 Ga0495630_0000366 3300046517 Bacteria 35779
154 Ga0495640_0012897 3300046533 Bacteria 6373
155 Ga0495586_0000017 3300046535 Bacteria 116426
156 Ga0495674_0001210 3300047319 Bacteria 24994
157 Ga0495672_0001152 3300047320 Bacteria 26729
158 Ga0501032_0000027 3300049569 Bacteria 136304
159 Ga0501033_0000002 3300049570 Bacteria 668574
160 Ga0501033_0001047 3300049570 Bacteria 25220
161 Ga0501038_0000180 3300049574 Bacteria 53794
162 Ga0501038_0004524 3300049574 Bacteria 12941
163 Ga0501048_0056520 3300049582 Bacteria 2784
164 Ga0501067_0009122 3300049583 Bacteria 5494
165 Ga0501071_0037691 3300049587 Bacteria 3453
166 Ga0501071_0042516 3300049587 Bacteria 3257
167 Ga0501075_0024166 3300049591 Bacteria 4452
168 Ga0501076_0019354 3300049592 Bacteria 5204
169 Ga0501081_0049070 3300049743 Bacteria 2906
170 Ga0501083_0057904 3300049744 Unclassified 2594
171 nmdc:mga0yw44_25734_c1 3300050492 Bacteria 3352
172 nmdc:mga06z11_4145_c1 3300050494 Bacteria 5671
173 nmdc:mga05p37_27_c1 3300050507 Bacteria 115422
174 nmdc:mga05p37_7040_c1 3300050507 Bacteria 13256
175 nmdc:mga0qj67_13156_c1 3300050509 Bacteria 6248
176 nmdc:mga08y16_12183_c1 3300050511 Bacteria 9038
177 nmdc:mga08y16_163593_c1 3300050511 Bacteria 2312
178 nmdc:mga08y16_413_c1 3300050511 Bacteria 39237
179 nmdc:mga0n895_17408_c1 3300050512 Bacteria 6621
180 nmdc:mga0rr50_6308_c1 3300050513 Bacteria 7203
181 nmdc:mga0a205_119876_c1 3300050515 Bacteria 2530
182 Ga0501084_0088406 3300054114 Bacteria 2601
183 Ga0501084_0111175 3300054114 Bacteria 2302
184 Ga0501082_0079447 3300060353 Bacteria 2830
185 Ga0466962_0000060 3300061719 Bacteria 44650
186 2929925397 2929921140 Bacteria 8649150
187 8003155395 8003151029 Bacteria 8187759
188 Ga0068869_100016046
189 JGI24743J22301_10000053
190 JGI24033J26618_1000042
191 JGI25154J39366_1000042
192 JGI25153J46596_10005853
193 rootH2_10000327
194 rootH2_10001404
195 rootH2_10014478
196 rootH2_10043986
197 rootL2_10234874
198 JGI25160J50197_1001434
199 JGI25160J50197_1004462
200 Ga0055526_1002734
201 Ga0055526_1008922
202 Ga0055528_1000179
203 Ga0065165_1000280
204 Ga0065715_10112032
205 Ga0070683_100006819
206 Ga0068869_100000183
207 Ga0070666_10000078
208 Ga0068868_100033004
209 Ga0070689_100002570
210 Ga0070661_100000397
211 Ga0070661_100008172
212 Ga0070671_100023475
213 Ga0070659_100013603
214 Ga0070667_100008104
215 Ga0070678_100006680
216 Ga0068867_100013212
217 Ga0070707_100002391
218 Ga0070698_100031403
219 Ga0070679_100030176
220 Ga0070684_100045594
221 Ga0068853_100089202
222 Ga0070704_100013960
223 Ga0068855_100001157
224 Ga0068855_100048588
225 Ga0070664_100036450
226 Ga0070664_100037676
227 Ga0068854_100015697
228 Ga0068856_100000202
229 Ga0068856_100030674
230 Ga0068852_100001148
231 Ga0068859_100000003
232 Ga0068859_100007240
233 Ga0068863_100006905
234 Ga0068858_100034835
235 Ga0068860_100001024
236 Ga0068860_100002159
237 Ga0081455_10014245
238 Ga0075365_10023599
239 Ga0075366_10002736
240 Ga0068871_100001628
241 Ga0068871_100010833
242 Ga0075428_100011325
243 Ga0075428_100076451
244 Ga0075430_100005996
245 Ga0075430_100012217
246 Ga0068865_100000818
247 Ga0097620_100000003
248 Ga0097620_100007240
249 Ga0097620_100058924
250 Ga0075435_100002031
251 Ga0105240_10000147
252 Ga0105240_10000168
253 Ga0105240_10008415
254 Ga0105240_10018443
255 Ga0105240_10028461
256 Ga0111539_10000117
257 Ga0111539_10000332
258 Ga0111539_10004698
259 Ga0111539_10045668
260 Ga0111539_10066472
261 Ga0105245_10058959
262 Ga0105247_10013303
263 Ga0114129_10001429
264 Ga0105241_10005898
265 Ga0105241_10006474
266 Ga0105237_10002292
267 Ga0105237_10004181
268 Ga0105239_10000896
269 Ga0105239_10067891
270 Ga0157370_10001053
271 Ga0157370_10003222
272 Ga0157374_10000002
273 Ga0157378_10036674
274 Ga0157372_10000894
275 Ga0157375_10032951
276 Ga0157375_10106849
277 Ga0157379_10040255
278 Ga0157376_10000543
279 Ga0209646_1000017
280 Ga0209673_1000014
281 Ga0209673_1000018
282 Ga0209758_1004251
283 Ga0209050_1000481
284 Ga0207426_1000418
285 Ga0207426_1001281
286 Ga0209257_1004554
287 Ga0207680_10000102
288 Ga0207645_10000306
289 Ga0207695_10000023
290 Ga0207695_10000031
291 Ga0207695_10000110
292 Ga0207671_10013026
293 Ga0207671_10043624
294 Ga0207649_10000113
295 Ga0207649_10006734
296 Ga0207646_10008217
297 Ga0207650_10034686
298 Ga0207690_10009106
299 Ga0207670_10014440
300 Ga0207704_10000834
301 Ga0207704_10036502
302 Ga0207689_10001868
303 Ga0207689_10006315
304 Ga0207661_10010354
305 Ga0207679_10022720
306 Ga0207667_10000144
307 Ga0207667_10003062
308 Ga0207667_10047115
309 Ga0207712_10019908
310 Ga0207703_10024221
311 Ga0207639_10050660
312 Ga0207702_10000909
313 Ga0207702_10027426
314 Ga0207641_10000026
315 Ga0207648_10001977
316 Ga0207648_10002657
317 Ga0207648_10029203
318 Ga0207676_10021930
319 Ga0207674_10006611
320 Ga0207683_10000574
321 Ga0207428_10000122
322 Ga0268264_10000614
323 Ga0268264_10016604
324 Ga0268264_10084551
325 Ga0307515_10000780
326 Ga0307511_10000264
327 Ga0307509_10022235
328 Ga0307408_100010440
329 Ga0307406_10013927
330 Ga0307414_10000003
331 Ga0395899_0001717
332 Ga0395905_0000030
333 Ga0395905_0003970
334 Ga0395901_0004335
335 Ga0436365_1195956
336 Ga0466972_0000004
337 Ga0466971_0000155
338 Ga0466970_0003819
339 Ga0495641_0015496
340 Ga0495630_0000366
341 Ga0495640_0012897
342 Ga0495586_0000017
343 Ga0495674_0001210
344 Ga0495672_0001152
345 Ga0501032_0000027
346 Ga0501033_0000002
347 Ga0501033_0001047
348 Ga0501038_0000180
349 Ga0501038_0004524
350 Ga0501048_0056520
351 Ga0501067_0009122
352 Ga0501071_0037691
353 Ga0501071_0042516
354 Ga0501075_0024166
355 Ga0501076_0019354
356 Ga0501081_0049070
357 Ga0501083_0057904
358 nmdc:mga0yw44_25734_c1
359 nmdc:mga06z11_4145_c1
360 nmdc:mga05p37_27_c1
361 nmdc:mga05p37_7040_c1
362 nmdc:mga0qj67_13156_c1
363 nmdc:mga08y16_12183_c1
364 nmdc:mga08y16_163593_c1
365 nmdc:mga08y16_413_c1
366 nmdc:mga0n895_17408_c1
367 nmdc:mga0rr50_6308_c1
368 nmdc:mga0a205_119876_c1
369 Ga0501084_0088406
370 Ga0501084_0111175
371 Ga0501082_0079447
372 Ga0466962_0000060
373 2929925397
374 8003155395

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21365

Glyco_hydro_31_3rd

Glycosyl hydrolase family 31 C-terminal domain

652

738

0.98

PF17137

DUF5110

Domain of unknown function (DUF5110)

754

823

0.9

PF01055

Glyco_hydro_31_2nd

Glycosyl hydrolases family 31 TIM-barrel domain

338

644

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7l9e-assembly1.cif.gz_A crystal structure of apo-alpha glucosidase 0.8385 250 740
5npd-assembly1.cif.gz_A crystal structure of d412n nucleophile mutant cjagd31b (alpha-transglucosylase from glycoside hydrolase family 31) in complex with alpha cyclophellitol aziridine probe cf021 0.8122 32 745
6jr8-assembly4.cif.gz_D flavobacterium johnsoniae gh31 dextranase, fjdex31a, mutant d412a complexed with isomaltotriose 0.811 27 733
4b9y-assembly1.cif.gz_A crystal structure of apo agd31b, alpha-transglucosylase in glycoside hydrolase family 31 0.8081 32 745
6jr7-assembly3.cif.gz_C flavobacterium johnsoniae gh31 dextranase, fjdex31a, complexed with glucose 0.807 27 733
ID Description Score Start End Superfamily
af_Q8TET4_702_775_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9851 577 647 2.60.40.1180
af_B3DIZ3_680_779_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9797 555 647 2.60.40.1180
2xvlA04 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.978 569 646 2.60.40.1180
5f7sB04 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.97 567 648 2.60.40.1180
af_A0A0R0JT00_607_679_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9661 577 647 2.60.40.1180
ID Description Score Start End GO Terms
AF-W1VKW2-F1-model_v4 Alpha-glucosidase 0.9969 587 647
AF-A0A4V1S5P9-F1-model_v4 Glycoside hydrolase 0.9878 38 657 GO:0004553
GO:0005975
AF-A0A7X3V4I1-F1-model_v4 Glycoside hydrolase family 31 protein 0.9824 244 748 GO:0004553
GO:0005975
AF-A0A2E9TYU3-F1-model_v4 Glycoside hydrolase 0.9816 112 747 GO:0004553
GO:0005975
AF-A0A3D0CVZ4-F1-model_v4 Glycosyl hydrolase family 31 C-terminal domain-containing protein 0.9808 549 649

Map