F287310

General Info

Members Datasets Scaffolds Average Seq Length
187 139 374 1152

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100004400|Ga0070707_1000044009
Length 1281
Sequence MACAVGAYFREVKVVVSGNFRRFEADERFEQLVAEVRAGRRLVRVAGLVGGAKALTIAALQRATGRRLAVLALRGRDLEDLERDLRFFYCALNSRAECEGEVFTLPASESDPYSGTSPHAEILERRALALWRLAAGAGDIVMLTARSLMRRFVALEEMRRAGVSLRVGEELPLDYLRDHLAAIGYVRSDPVGGVGEFSSRGGILDFYSPSGRTDGVAHPVRVEFFGDTIDSIREFDPESQRSIREVEETVIAPMRDERATERDFREWARAARGQWRDERYERALRDRLVFAEEGEAFQGWEYLMPLVRPLTASVFDYLQDMVLVVDEPAEVEKHVRDTLDELRRGYERTEAADEIALAPDRLFLTPEELRERMATVQRVELRLLGSAPLAIEEELGTENIGMGQRASAADQTRPTPFLQGSSTAPLFLFPPEPTVSEVEIPSRSVRRWHGRLAELAADLKQQAGAGHQTIFVLPSTGVADRIREVLNEYNVAGVTIAECGMRIADLSNEDGGLKNGAADQHSAIRIPHSAITLTVGQLSVGFALPSSGLTVYTERDVFDEAVSVERPAKGKRSQAAAFLSDFRDLKIGDYVVHIDHGIGQFQGLVQLSTDGAQTPAAIYARMTGAETKAETDGKREFMLLVYADGAKLYVPVERLDLVQKYSSAEGHVPTLDRLGGIAWQKTKARAKRAMRDMAEELLKLYAERKLVTGYAFSGDSPWQQEFEDAFPYELTPDQATAISDAKRDMEQPTPMDRLLCGDVGYGKTEVAMRSAFKAVMDGKQVAVLAPTTVLAYQHYQTFRARFAAFPARIELLSRFRSPKEQKEIVAAVEAGAIDVLIGTHRILSRDLHFKDLGLVVVDEEQRFGVAHKERLKQLKKKVDVLTMTATPIPRTLNMSLLGLRDMSVIETPPRDRLAIQTNVVLFSETVIRSAIESELQRQGQVFFVHNRVESIVSVAELIQRIVPSARLVVAHGQMGEKEMENAMLDFIAYQYDVLVATTIIENGIDIPRANTIVINRADNYGLAQLYQLRGRVGRSNRRAYAYLLIPSDQELTPIARRRLAAIREFSDLGAGFRIAALDLELRGAGNLLGGQQSGHIDDIGFDLYCQMLERTVSELRGEEIEEEVSTQLNLGVDTRIPDEYISDMSQRLRTYKRIASARSDQDLERIRDEMADRYGRLPEPVENLFAYARVRREAERLGIISIDRVGEGLAIKLGEKARVEPDRLLKFLADHPAASFTPGGVLKVKLESGTEEELNQRVFATLNGVLKRMQKTVESREVRGK

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
73 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
85 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
88 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
93 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
100 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
101 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
102 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
103 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
113 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
114 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
136 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
137 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
138 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
139 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.47
Metatranscriptomes 0
Isolates 0.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.07
Nodule 0
Rhizoplane 16.58
Rhizosphere 79.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100004400 3300005468 Bacteria 13203
2 Ga0070658_10003364 3300005327 Bacteria 13179
3 Ga0070683_100004174 3300005329 Bacteria 11836
4 Ga0070683_100011592 3300005329 Bacteria 7627
5 Ga0068868_100016046 3300005338 Bacteria 5555
6 Ga0070660_100005125 3300005339 Bacteria 9051
7 Ga0070689_100001100 3300005340 Bacteria 16984
8 Ga0070669_100004626 3300005353 Bacteria 9931
9 Ga0070671_100027122 3300005355 Bacteria 4712
10 Ga0070659_100002968 3300005366 Bacteria 12090
11 Ga0070714_100000252 3300005435 Bacteria 41753
12 Ga0070711_100000612 3300005439 Bacteria 18621
13 Ga0070694_100010929 3300005444 Bacteria 5618
14 Ga0070708_100001552 3300005445 Bacteria 17598
15 Ga0070708_100003275 3300005445 Bacteria 12643
16 Ga0070681_10037925 3300005458 Bacteria 4833
17 Ga0070685_10009267 3300005466 Bacteria 5082
18 Ga0070707_100004127 3300005468 Bacteria 13628
19 Ga0070698_100034691 3300005471 Bacteria 5221
20 Ga0070699_100018496 3300005518 Bacteria 5984
21 Ga0070679_100028204 3300005530 Bacteria 5533
22 Ga0070684_100000098 3300005535 Bacteria 56167
23 Ga0068853_100000171 3300005539 Bacteria 45170
24 Ga0070696_100007407 3300005546 Bacteria 7336
25 Ga0068855_100003304 3300005563 Bacteria 19733
26 Ga0070664_100015015 3300005564 Bacteria 6322
27 Ga0068854_100000175 3300005578 Bacteria 43607
28 Ga0068852_100011269 3300005616 Bacteria 6722
29 Ga0068859_100043332 3300005617 Bacteria 4522
30 Ga0068864_100016341 3300005618 Bacteria 6177
31 Ga0068863_100006454 3300005841 Bacteria 11502
32 Ga0081455_10000642 3300005937 Bacteria 45291
33 Ga0081539_10000663 3300005985 Bacteria 69078
34 Ga0081539_10001904 3300005985 Bacteria 32329
35 Ga0081539_10002451 3300005985 Bacteria 26173
36 Ga0081539_10003067 3300005985 Bacteria 21541
37 Ga0081539_10006335 3300005985 Bacteria 11413
38 Ga0075434_100000868 3300006871 Bacteria 24157
39 Ga0075434_100001541 3300006871 Bacteria 19513
40 Ga0068865_100009969 3300006881 Bacteria 5903
41 Ga0075436_100001111 3300006914 Bacteria 18193
42 Ga0097620_100043333 3300006931 Bacteria 4522
43 Ga0075435_100001083 3300007076 Bacteria 17320
44 Ga0075435_100016643 3300007076 Bacteria 5545
45 Ga0105240_10004346 3300009093 Bacteria 21634
46 Ga0105240_10010265 3300009093 Bacteria 13183
47 Ga0105247_10007004 3300009101 Bacteria 6938
48 Ga0105247_10009745 3300009101 Bacteria 5824
49 Ga0105238_10008010 3300009551 Bacteria 10571
50 Ga0105238_10026319 3300009551 Bacteria 5929
51 Ga0105249_10011704 3300009553 Bacteria 7717
52 Ga0105249_10013910 3300009553 Bacteria 7114
53 Ga0157378_10013315 3300013297 Bacteria 7190
54 Ga0163162_10042327 3300013306 Bacteria 4558
55 Ga0157375_10017788 3300013308 Bacteria 6428
56 Ga0163163_10062970 3300014325 Bacteria 3677
57 Ga0157380_10003753 3300014326 Bacteria 10447
58 Ga0163161_10001849 3300017792 Bacteria 15463
59 Ga0213876_10000006 3300021384 Bacteria 700803
60 Ga0213876_10001003 3300021384 Bacteria 18424
61 Ga0207695_10017730 3300025913 Bacteria 8266
62 Ga0207695_10024198 3300025913 Bacteria 6838
63 Ga0207657_10006648 3300025919 Bacteria 11965
64 Ga0207657_10011694 3300025919 Bacteria 8697
65 Ga0207646_10000854 3300025922 Bacteria 39429
66 Ga0207681_10002485 3300025923 Bacteria 11701
67 Ga0207694_10005027 3300025924 Bacteria 10228
68 Ga0207687_10000096 3300025927 Bacteria 64544
69 Ga0207664_10000044 3300025929 Bacteria 147216
70 Ga0207690_10001350 3300025932 Bacteria 15401
71 Ga0207665_10008222 3300025939 Bacteria 6888
72 Ga0207661_10002389 3300025944 Bacteria 12923
73 Ga0207667_10013029 3300025949 Bacteria 9545
74 Ga0207667_10020829 3300025949 Bacteria 7281
75 Ga0207667_10037546 3300025949 Bacteria 5177
76 Ga0207640_10000117 3300025981 Bacteria 60081
77 Ga0207639_10000500 3300026041 Bacteria 27109
78 Ga0207641_10018922 3300026088 Bacteria 5649
79 Ga0207676_10006424 3300026095 Bacteria 8305
80 Ga0207674_10036939 3300026116 Bacteria 5083
81 Ga0207683_10000153 3300026121 Bacteria 57625
82 Ga0207698_10009955 3300026142 Bacteria 6082
83 Ga0209998_10000275 3300027717 Bacteria 16267
84 Ga0207428_10001144 3300027907 Bacteria 28744
85 Ga0265338_10016949 3300028800 Bacteria 7884
86 Ga0265327_10002280 3300031251 Bacteria 20612
87 Ga0307513_10031882 3300031456 Bacteria 5956
88 Ga0307410_10000476 3300031852 Bacteria 16217
89 Ga0307409_100001647 3300031995 Bacteria 11198
90 Ga0373943_0005600 3300035170 Bacteria 5637
91 Ga0373946_0002106 3300035171 Bacteria 6984
92 Ga0373947_0002036 3300035725 Bacteria 12340
93 Ga0395905_0020272 3300037471 Bacteria 6300
94 Ga0436365_0695157 3300039437 Bacteria 511493
95 Ga0436365_1753418 3300039437 Bacteria 95553
96 Ga0466963_0002159 3300044694 Bacteria 10876
97 Ga0466963_0007583 3300044694 Bacteria 6475
98 Ga0466957_0005305 3300044842 Bacteria 7226
99 Ga0466967_0012911 3300045976 Bacteria 6422
100 Ga0466967_0020314 3300045976 Bacteria 5365
101 Ga0495603_0002823 3300046455 Bacteria 10260
102 Ga0495603_0012537 3300046455 Bacteria 5132
103 Ga0495629_0007212 3300046459 Bacteria 8187
104 Ga0495629_0011746 3300046459 Bacteria 6355
105 Ga0495650_0000037 3300046471 Bacteria 390090
106 Ga0495650_0008979 3300046471 Bacteria 5747
107 Ga0495580_0012175 3300046472 Bacteria 6611
108 Ga0495664_0000007 3300046477 Bacteria 386710
109 Ga0495664_0003722 3300046477 Bacteria 8316
110 Ga0495594_0001334 3300046499 Bacteria 12825
111 Ga0495594_0001791 3300046499 Bacteria 11163
112 Ga0495630_0002537 3300046517 Bacteria 12660
113 Ga0495644_0000010 3300046523 Bacteria 106185
114 Ga0495598_0000228 3300046537 Bacteria 9973
115 Ga0495645_0002497 3300046543 Bacteria 12483
116 Ga0495667_0009159 3300046559 Bacteria 6723
117 Ga0495667_0014974 3300046559 Bacteria 5240
118 Ga0495668_0001319 3300046616 Bacteria 24414
119 Ga0495634_0001938 3300046642 Bacteria 17702
120 Ga0495611_0003514 3300046648 Bacteria 6898
121 Ga0495625_0000166 3300046660 Bacteria 102927
122 Ga0495625_0016215 3300046660 Bacteria 5870
123 Ga0495635_0004651 3300046663 Bacteria 9527
124 Ga0495657_0000008 3300046675 Bacteria 221090
125 Ga0495613_0004301 3300046689 Bacteria 10665
126 Ga0495600_0017650 3300046809 Bacteria 4540
127 Ga0495581_0002059 3300047315 Bacteria 11309
128 Ga0495604_0000047 3300047317 Bacteria 109717
129 Ga0495604_0013493 3300047317 Bacteria 6511
130 Ga0495672_0010447 3300047320 Bacteria 6612
131 Ga0495675_0002217 3300047444 Bacteria 11591
132 Ga0495614_0005566 3300048089 Bacteria 5679
133 Ga0496100_0001397 3300048903 Bacteria 11826
134 Ga0496101_0000771 3300048904 Bacteria 18938
135 Ga0496101_0001422 3300048904 Bacteria 14315
136 Ga0496101_0008745 3300048904 Bacteria 6624
137 Ga0496101_0028594 3300048904 Bacteria 3893
138 Ga0496102_0000002 3300048905 Bacteria 814588
139 Ga0496102_0005630 3300048905 Bacteria 10632
140 Ga0496102_0026984 3300048905 Bacteria 5128
141 Ga0496103_0000046 3300048906 Bacteria 161981
142 Ga0496104_0000001 3300048907 Bacteria 711867
143 Ga0496104_0008909 3300048907 Bacteria 8916
144 Ga0496104_0009263 3300048907 Bacteria 8757
145 Ga0496106_0005226 3300048909 Bacteria 9615
146 Ga0496106_0013677 3300048909 Bacteria 5992
147 Ga0496107_0001864 3300048910 Bacteria 13331
148 Ga0496107_0017151 3300048910 Bacteria 5094
149 Ga0496107_0020713 3300048910 Bacteria 4647
150 Ga0496108_0003362 3300048911 Bacteria 12841
151 Ga0496108_0020838 3300048911 Bacteria 5391
152 Ga0496109_0000015 3300048912 Bacteria 214913
153 Ga0496109_0035818 3300048912 Bacteria 4479
154 Ga0496109_0048016 3300048912 Bacteria 3883
155 Ga0496110_0000311 3300048913 Bacteria 32164
156 Ga0496110_0003825 3300048913 Bacteria 11593
157 Ga0496111_0019791 3300048914 Bacteria 4681
158 Ga0496112_0001956 3300048915 Bacteria 16273
159 Ga0496112_0002648 3300048915 Bacteria 14469
160 Ga0496113_0003514 3300048916 Bacteria 9401
161 Ga0496114_0023983 3300048917 Bacteria 4978
162 Ga0496115_0000329 3300048918 Bacteria 40480
163 Ga0496115_0007173 3300048918 Bacteria 8186
164 Ga0496126_0001139 3300048929 Bacteria 44245
165 Ga0501036_0006089 3300049572 Bacteria 9788
166 Ga0501038_0012365 3300049574 Bacteria 7801
167 Ga0501042_0012031 3300049578 Bacteria 5852
168 Ga0501067_0000624 3300049583 Bacteria 19082
169 Ga0501069_0000101 3300049585 Bacteria 40172
170 Ga0501070_0010477 3300049586 Bacteria 7840
171 Ga0501071_0010604 3300049587 Bacteria 6180
172 Ga0501072_0001441 3300049588 Bacteria 17829
173 Ga0501075_0009743 3300049591 Bacteria 6731
174 Ga0501079_0004885 3300049741 Bacteria 9938
175 Ga0501079_0004900 3300049741 Bacteria 9923
176 Ga0501080_0037355 3300049742 Bacteria 4536
177 Ga0501045_0006033 3300049824 Bacteria 8389
178 nmdc:mga0n895_204_c1 3300050512 Bacteria 37184
179 nmdc:mga0n895_710_c1 3300050512 Bacteria 23413
180 nmdc:mga0rr50_2931_c1 3300050513 Bacteria 9747
181 nmdc:mga0rr50_4079_c1 3300050513 Bacteria 8528
182 nmdc:mga08x19_2133_c1 3300050514 Bacteria 12089
183 Ga0495601_0000276 3300053077 Bacteria 27580
184 Ga0495612_0000092 3300053078 Bacteria 39332
185 Ga0500651_0000009 3300053093 Bacteria 270362
186 Ga0500595_000040 3300053119 Bacteria 97854
187 2884218393 2884215851 Bacteria 4554841
188 Ga0070707_100004400
189 Ga0070658_10003364
190 Ga0070683_100004174
191 Ga0070683_100011592
192 Ga0068868_100016046
193 Ga0070660_100005125
194 Ga0070689_100001100
195 Ga0070669_100004626
196 Ga0070671_100027122
197 Ga0070659_100002968
198 Ga0070714_100000252
199 Ga0070711_100000612
200 Ga0070694_100010929
201 Ga0070708_100001552
202 Ga0070708_100003275
203 Ga0070681_10037925
204 Ga0070685_10009267
205 Ga0070707_100004127
206 Ga0070698_100034691
207 Ga0070699_100018496
208 Ga0070679_100028204
209 Ga0070684_100000098
210 Ga0068853_100000171
211 Ga0070696_100007407
212 Ga0068855_100003304
213 Ga0070664_100015015
214 Ga0068854_100000175
215 Ga0068852_100011269
216 Ga0068859_100043332
217 Ga0068864_100016341
218 Ga0068863_100006454
219 Ga0081455_10000642
220 Ga0081539_10000663
221 Ga0081539_10001904
222 Ga0081539_10002451
223 Ga0081539_10003067
224 Ga0081539_10006335
225 Ga0075434_100000868
226 Ga0075434_100001541
227 Ga0068865_100009969
228 Ga0075436_100001111
229 Ga0097620_100043333
230 Ga0075435_100001083
231 Ga0075435_100016643
232 Ga0105240_10004346
233 Ga0105240_10010265
234 Ga0105247_10007004
235 Ga0105247_10009745
236 Ga0105238_10008010
237 Ga0105238_10026319
238 Ga0105249_10011704
239 Ga0105249_10013910
240 Ga0157378_10013315
241 Ga0163162_10042327
242 Ga0157375_10017788
243 Ga0163163_10062970
244 Ga0157380_10003753
245 Ga0163161_10001849
246 Ga0213876_10000006
247 Ga0213876_10001003
248 Ga0207695_10017730
249 Ga0207695_10024198
250 Ga0207657_10006648
251 Ga0207657_10011694
252 Ga0207646_10000854
253 Ga0207681_10002485
254 Ga0207694_10005027
255 Ga0207687_10000096
256 Ga0207664_10000044
257 Ga0207690_10001350
258 Ga0207665_10008222
259 Ga0207661_10002389
260 Ga0207667_10013029
261 Ga0207667_10020829
262 Ga0207667_10037546
263 Ga0207640_10000117
264 Ga0207639_10000500
265 Ga0207641_10018922
266 Ga0207676_10006424
267 Ga0207674_10036939
268 Ga0207683_10000153
269 Ga0207698_10009955
270 Ga0209998_10000275
271 Ga0207428_10001144
272 Ga0265338_10016949
273 Ga0265327_10002280
274 Ga0307513_10031882
275 Ga0307410_10000476
276 Ga0307409_100001647
277 Ga0373943_0005600
278 Ga0373946_0002106
279 Ga0373947_0002036
280 Ga0395905_0020272
281 Ga0436365_0695157
282 Ga0436365_1753418
283 Ga0466963_0002159
284 Ga0466963_0007583
285 Ga0466957_0005305
286 Ga0466967_0012911
287 Ga0466967_0020314
288 Ga0495603_0002823
289 Ga0495603_0012537
290 Ga0495629_0007212
291 Ga0495629_0011746
292 Ga0495650_0000037
293 Ga0495650_0008979
294 Ga0495580_0012175
295 Ga0495664_0000007
296 Ga0495664_0003722
297 Ga0495594_0001334
298 Ga0495594_0001791
299 Ga0495630_0002537
300 Ga0495644_0000010
301 Ga0495598_0000228
302 Ga0495645_0002497
303 Ga0495667_0009159
304 Ga0495667_0014974
305 Ga0495668_0001319
306 Ga0495634_0001938
307 Ga0495611_0003514
308 Ga0495625_0000166
309 Ga0495625_0016215
310 Ga0495635_0004651
311 Ga0495657_0000008
312 Ga0495613_0004301
313 Ga0495600_0017650
314 Ga0495581_0002059
315 Ga0495604_0000047
316 Ga0495604_0013493
317 Ga0495672_0010447
318 Ga0495675_0002217
319 Ga0495614_0005566
320 Ga0496100_0001397
321 Ga0496101_0000771
322 Ga0496101_0001422
323 Ga0496101_0008745
324 Ga0496101_0028594
325 Ga0496102_0000002
326 Ga0496102_0005630
327 Ga0496102_0026984
328 Ga0496103_0000046
329 Ga0496104_0000001
330 Ga0496104_0008909
331 Ga0496104_0009263
332 Ga0496106_0005226
333 Ga0496106_0013677
334 Ga0496107_0001864
335 Ga0496107_0017151
336 Ga0496107_0020713
337 Ga0496108_0003362
338 Ga0496108_0020838
339 Ga0496109_0000015
340 Ga0496109_0035818
341 Ga0496109_0048016
342 Ga0496110_0000311
343 Ga0496110_0003825
344 Ga0496111_0019791
345 Ga0496112_0001956
346 Ga0496112_0002648
347 Ga0496113_0003514
348 Ga0496114_0023983
349 Ga0496115_0000329
350 Ga0496115_0007173
351 Ga0496126_0001139
352 Ga0501036_0006089
353 Ga0501038_0012365
354 Ga0501042_0012031
355 Ga0501067_0000624
356 Ga0501069_0000101
357 Ga0501070_0010477
358 Ga0501071_0010604
359 Ga0501072_0001441
360 Ga0501075_0009743
361 Ga0501079_0004885
362 Ga0501079_0004900
363 Ga0501080_0037355
364 Ga0501045_0006033
365 nmdc:mga0n895_204_c1
366 nmdc:mga0n895_710_c1
367 nmdc:mga0rr50_2931_c1
368 nmdc:mga0rr50_4079_c1
369 nmdc:mga08x19_2133_c1
370 Ga0495601_0000276
371 Ga0495612_0000092
372 Ga0500651_0000009
373 Ga0500595_000040
374 2884218393

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03461

TRCF

TRCF domain

1130

1224

0.97

PF17757

UvrB_inter

UvrB interaction domain

163

256

0.91

PF02559

CarD_TRCF_RID

CarD-like/TRCF RID domain

585

662

0.89

PF00271

Helicase_C

Helicase conserved C-terminal domain

924

1036

0.88

PF04851

ResIII

Type III restriction enzyme, res subunit

727

889

0.81

PF00270

DEAD

DEAD/DEAH box helicase

731

895

0.8

Map