F287876

General Info

Members Datasets Scaffolds Average Seq Length
187 145 374 620

Family's Representative Sequence

Representative Sequence 3300031241|Ga0265325_10016293|Ga0265325_100162932
Length 656
Sequence MCGIAGFILTGNLRDAERRLRAMGDSVRHRGPDGEGYALFSVGDHRYTVGLAHRRLAIIDLVTGEQPMTHQEAGVTLIFNGEIYNFQELRAELEARGERFRTRSDTEVLLNAYVAWGPACVARLRGMFAFALWDHPRRRLMLARDHFGKKPLYLSERDGLILFGSEIKALLAFGAIAPELDRASIADYLVYRYVPAPHTLFAGVRKLMPGSYAVWENGRLSETRFYTPPYGEAPEPGQPIADPVTAFRDKLDEAVRLRMVSDVPFGAFLSGGVDSSTIVALMSRHSARPINTFAVGFREARYSELRYARLVAKKFATRHIEVVVSADDLMQHLPTLIEHGDAPVADPSNIPLYLISCAAAKSVKMVLTGEGADELLAGYPKHSAERFVALYQRLVPRALHRGLVEPLTRLLPYDFRRVKIMAAAIGLRDPRERLPRWLGALSFSERDRLLDASVPRRPVDAQPFVADPGRSALERMLFFDQTSWLPDNLLERGDRISMAASIEARMPFMDTGLAALAARLPDSWRIRGLVQKYILRTAMADILPPVILDRPKVGFRVPVNEWFRGPMRAFVRDHIAGQRSLCRELCDQRQIERVLREHESGRQNHEKLLWTLVNLELFQERYALAPTVTRLADHRSALAARAALAQEYPRATQVGH

Samples

Sample ID Description Type Environment
1 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
2 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
89 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
106 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
107 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.93
Metatranscriptomes 0.53
Isolates 0.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.14
Nodule 0
Rhizoplane 2.14
Rhizosphere 90.37
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265325_10016293 3300031241 Bacteria 4157
2 Ga0055531_10006097 3300003794 Bacteria 6904
3 Ga0070670_100070007 3300005331 Bacteria 3012
4 Ga0068869_100004417 3300005334 Bacteria 8740
5 Ga0068869_100055096 3300005334 Bacteria 2897
6 Ga0070666_10014643 3300005335 Bacteria 4994
7 Ga0070680_100048527 3300005336 Bacteria 3460
8 Ga0070660_100037074 3300005339 Bacteria 3695
9 Ga0070691_10000786 3300005341 Bacteria 12615
10 Ga0070692_10005824 3300005345 Bacteria 5300
11 Ga0070675_100044879 3300005354 Bacteria 3615
12 Ga0070671_100023499 3300005355 Bacteria 5045
13 Ga0070659_100062659 3300005366 Bacteria 2940
14 Ga0070667_100046321 3300005367 Bacteria 3658
15 Ga0070667_100051982 3300005367 Bacteria 3455
16 Ga0070714_100072821 3300005435 Bacteria 2975
17 Ga0070713_100012557 3300005436 Bacteria 6218
18 Ga0070713_100072976 3300005436 Bacteria 2904
19 Ga0070710_10002656 3300005437 Bacteria 8495
20 Ga0070701_10056436 3300005438 Bacteria 2055
21 Ga0070681_10005823 3300005458 Bacteria 11929
22 Ga0070685_10041163 3300005466 Bacteria 2631
23 Ga0070706_100000235 3300005467 Bacteria 67624
24 Ga0070706_100064003 3300005467 Bacteria 3399
25 Ga0070698_100000071 3300005471 Bacteria 75746
26 Ga0070698_100002772 3300005471 Bacteria 19273
27 Ga0070699_100016119 3300005518 Bacteria 6415
28 Ga0070679_100011801 3300005530 Bacteria 8333
29 Ga0070697_100004578 3300005536 Bacteria 10622
30 Ga0068853_100000267 3300005539 Bacteria 36762
31 Ga0068853_100000829 3300005539 Bacteria 21624
32 Ga0070696_100000055 3300005546 Bacteria 53389
33 Ga0070693_100001271 3300005547 Bacteria 11405
34 Ga0070704_100031804 3300005549 Bacteria 3553
35 Ga0068855_100001690 3300005563 Bacteria 27598
36 Ga0070664_100068949 3300005564 Bacteria 3024
37 Ga0068857_100024257 3300005577 Bacteria 5338
38 Ga0070702_100000618 3300005615 Bacteria 13083
39 Ga0068852_100056583 3300005616 Bacteria 3390
40 Ga0068852_100099765 3300005616 Bacteria 2618
41 Ga0068864_100039157 3300005618 Bacteria 4050
42 Ga0068870_10003589 3300005840 Bacteria 6582
43 Ga0068863_100045136 3300005841 Bacteria 4182
44 Ga0068860_100033717 3300005843 Bacteria 4912
45 Ga0097621_100033475 3300006237 Bacteria 4093
46 Ga0068871_100042638 3300006358 Bacteria 3644
47 Ga0075428_100104896 3300006844 Bacteria 3083
48 Ga0075433_10004134 3300006852 Bacteria 11257
49 Ga0075434_100016397 3300006871 Bacteria 7122
50 Ga0075434_100019891 3300006871 Bacteria 6502
51 Ga0068865_100008460 3300006881 Bacteria 6361
52 Ga0075435_100003716 3300007076 Bacteria 10395
53 Ga0075435_100076434 3300007076 Bacteria 2744
54 Ga0105240_10181355 3300009093 Bacteria 2484
55 Ga0111539_10156617 3300009094 Bacteria 2666
56 Ga0105247_10049663 3300009101 Bacteria 2579
57 Ga0114129_10106947 3300009147 Bacteria 3864
58 Ga0105241_10046855 3300009174 Bacteria 3284
59 Ga0105248_10018518 3300009177 Bacteria 7697
60 Ga0105237_10073563 3300009545 Bacteria 3409
61 Ga0105237_10122391 3300009545 Bacteria 2596
62 Ga0105249_10034835 3300009553 Bacteria 4564
63 Ga0105239_10013217 3300010375 Bacteria 9174
64 Ga0157373_10016101 3300013100 Bacteria 5457
65 Ga0157374_10017524 3300013296 Bacteria 6307
66 Ga0157374_10028311 3300013296 Bacteria 5062
67 Ga0157372_10023899 3300013307 Bacteria 6631
68 Ga0157372_10117024 3300013307 Bacteria 3057
69 Ga0157372_10129609 3300013307 Bacteria 2901
70 Ga0157372_10181978 3300013307 Bacteria 2433
71 Ga0157380_10000019 3300014326 Bacteria 116129
72 Ga0157380_10006254 3300014326 Bacteria 8361
73 Ga0157379_10106957 3300014968 Bacteria 2511
74 Ga0157379_10121157 3300014968 Bacteria 2353
75 Ga0224712_10003104 3300022467 Bacteria 4245
76 Ga0209257_1000231 3300025304 Bacteria 131226
77 Ga0207688_10001013 3300025901 Bacteria 14332
78 Ga0207643_10000266 3300025908 Bacteria 36491
79 Ga0207705_10056361 3300025909 Bacteria 2833
80 Ga0207684_10000638 3300025910 Bacteria 41623
81 Ga0207707_10107543 3300025912 Bacteria 2438
82 Ga0207671_10065379 3300025914 Bacteria 2705
83 Ga0207693_10024700 3300025915 Bacteria 4766
84 Ga0207652_10026407 3300025921 Bacteria 4836
85 Ga0207646_10068043 3300025922 Bacteria 3180
86 Ga0207659_10080209 3300025926 Bacteria 2410
87 Ga0207664_10004225 3300025929 Bacteria 9706
88 Ga0207711_10072620 3300025941 Bacteria 2989
89 Ga0207689_10003430 3300025942 Bacteria 14473
90 Ga0207667_10004977 3300025949 Bacteria 16233
91 Ga0207667_10134406 3300025949 Bacteria 2547
92 Ga0207658_10038723 3300025986 Bacteria 3437
93 Ga0207703_10081112 3300026035 Bacteria 2703
94 Ga0207639_10000625 3300026041 Bacteria 24388
95 Ga0207639_10011772 3300026041 Bacteria 6084
96 Ga0207639_10119034 3300026041 Bacteria 2166
97 Ga0207678_10000359 3300026067 Bacteria 41383
98 Ga0207702_10010668 3300026078 Bacteria 7677
99 Ga0207702_10021114 3300026078 Bacteria 5388
100 Ga0207641_10024914 3300026088 Bacteria 4932
101 Ga0207648_10042579 3300026089 Bacteria 3985
102 Ga0207676_10002781 3300026095 Bacteria 12441
103 Ga0207674_10009562 3300026116 Bacteria 11063
104 Ga0207674_10056560 3300026116 Bacteria 3983
105 Ga0207683_10003259 3300026121 Bacteria 14153
106 Ga0207698_10118971 3300026142 Bacteria 2232
107 Ga0268266_10010119 3300028379 Bacteria 8269
108 Ga0268264_10039325 3300028381 Bacteria 3908
109 Ga0265336_10008064 3300028666 Bacteria 3712
110 Ga0265328_10009928 3300031239 Bacteria 3850
111 Ga0265320_10015356 3300031240 Bacteria 4331
112 Ga0265339_10010418 3300031249 Bacteria 5776
113 Ga0265331_10000170 3300031250 Bacteria 80298
114 Ga0265331_10000456 3300031250 Bacteria 39566
115 Ga0265316_10022390 3300031344 Bacteria 5328
116 Ga0265316_10027647 3300031344 Bacteria 4692
117 Ga0265316_10047731 3300031344 Bacteria 3385
118 Ga0265313_10000602 3300031595 Bacteria 37380
119 Ga0265314_10007189 3300031711 Bacteria 9689
120 Ga0265314_10016547 3300031711 Bacteria 5818
121 Ga0265314_10017808 3300031711 Bacteria 5566
122 Ga0265314_10026184 3300031711 Bacteria 4386
123 Ga0265342_10000194 3300031712 Bacteria 67853
124 Ga0307414_10114370 3300032004 Bacteria 2061
125 Ga0373943_0021965 3300035170 Bacteria 2951
126 Ga0373955_0041011 3300035172 Bacteria 2479
127 Ga0373933_0000307 3300035724 Bacteria 31632
128 Ga0373925_0031575 3300037068 Bacteria 3893
129 Ga0395899_0000064 3300037312 Bacteria 207082
130 Ga0395898_0016490 3300037466 Bacteria 7556
131 Ga0395905_0000023 3300037471 Bacteria 319640
132 Ga0400490_40164 3300038726 Bacteria 3595
133 Ga0400483_036056 3300039062 Bacteria 17627
134 Ga0400487_21833 3300039110 Bacteria 12695
135 Ga0400487_25658 3300039110 Bacteria 81592
136 Ga0436361_0610429 3300039447 Bacteria 6116
137 Ga0439448_0002074 3300042005 Bacteria 5378
138 Ga0451577_0002088 3300042876 Bacteria 24584
139 Ga0451577_0061643 3300042876 Bacteria 3345
140 Ga0466972_0003328 3300044658 Bacteria 7972
141 Ga0453683_0010914 3300044673 Bacteria 6006
142 Ga0453684_0032242 3300044712 Bacteria 7340
143 Ga0453684_0048340 3300044712 Bacteria 5627
144 Ga0453684_0097505 3300044712 Bacteria 3608
145 Ga0451576_0000022 3300045051 Bacteria 495037
146 Ga0451576_0002698 3300045051 Bacteria 25805
147 Ga0495633_0000414 3300046558 Bacteria 44428
148 Ga0496102_0003877 3300048905 Bacteria 12670
149 Ga0496108_0071658 3300048911 Bacteria 2924
150 Ga0496112_0002861 3300048915 Bacteria 14023
151 Ga0496115_0029912 3300048918 Bacteria 4282
152 Ga0496117_0006682 3300048920 Bacteria 11550
153 Ga0496118_0000223 3300048921 Bacteria 99360
154 Ga0496121_0020046 3300048924 Bacteria 6646
155 Ga0496122_0001279 3300048925 Bacteria 41853
156 Ga0496123_0002035 3300048926 Bacteria 26128
157 Ga0501031_0001530 3300049568 Bacteria 14371
158 Ga0501031_0002666 3300049568 Bacteria 11360
159 Ga0501033_0000005 3300049570 Bacteria 379089
160 Ga0501033_0027156 3300049570 Bacteria 4305
161 Ga0501034_0000392 3300049571 Bacteria 74503
162 Ga0501034_0002948 3300049571 Bacteria 19720
163 Ga0501036_0007087 3300049572 Bacteria 9120
164 Ga0501036_0062368 3300049572 Bacteria 3157
165 Ga0501037_0000546 3300049573 Bacteria 29911
166 Ga0501038_0000369 3300049574 Bacteria 38828
167 Ga0501039_0012136 3300049575 Bacteria 6569
168 Ga0501043_0007008 3300049579 Bacteria 8979
169 Ga0501043_0010407 3300049579 Bacteria 7288
170 Ga0501046_0012946 3300049580 Bacteria 7088
171 Ga0501047_0012419 3300049581 Bacteria 8062
172 Ga0501073_0000311 3300049589 Bacteria 32246
173 Ga0501080_0003060 3300049742 Bacteria 14764
174 Ga0501080_0013267 3300049742 Bacteria 7570
175 Ga0501080_0025796 3300049742 Bacteria 5460
176 Ga0501035_0006598 3300049822 Bacteria 10868
177 Ga0501035_0007989 3300049822 Bacteria 9860
178 Ga0501044_0006718 3300049823 Bacteria 12681
179 Ga0501044_0023228 3300049823 Bacteria 6598
180 Ga0501045_0000117 3300049824 Bacteria 40734
181 nmdc:mga05p37_83644_c1 3300050507 Bacteria 3931
182 nmdc:mga08y16_4458_c1 3300050511 Bacteria 14639
183 nmdc:mga0a205_26300_c1 3300050515 Bacteria 5548
184 nmdc:mga0a205_76518_c1 3300050515 Bacteria 3234
185 Ga0500610_0000121 3300053079 Bacteria 23676
186 Ga0500651_0000884 3300053093 Bacteria 14701
187 2839991496 2839989709 Bacteria 3773432
188 Ga0265325_10016293
189 Ga0055531_10006097
190 Ga0070670_100070007
191 Ga0068869_100004417
192 Ga0068869_100055096
193 Ga0070666_10014643
194 Ga0070680_100048527
195 Ga0070660_100037074
196 Ga0070691_10000786
197 Ga0070692_10005824
198 Ga0070675_100044879
199 Ga0070671_100023499
200 Ga0070659_100062659
201 Ga0070667_100046321
202 Ga0070667_100051982
203 Ga0070714_100072821
204 Ga0070713_100012557
205 Ga0070713_100072976
206 Ga0070710_10002656
207 Ga0070701_10056436
208 Ga0070681_10005823
209 Ga0070685_10041163
210 Ga0070706_100000235
211 Ga0070706_100064003
212 Ga0070698_100000071
213 Ga0070698_100002772
214 Ga0070699_100016119
215 Ga0070679_100011801
216 Ga0070697_100004578
217 Ga0068853_100000267
218 Ga0068853_100000829
219 Ga0070696_100000055
220 Ga0070693_100001271
221 Ga0070704_100031804
222 Ga0068855_100001690
223 Ga0070664_100068949
224 Ga0068857_100024257
225 Ga0070702_100000618
226 Ga0068852_100056583
227 Ga0068852_100099765
228 Ga0068864_100039157
229 Ga0068870_10003589
230 Ga0068863_100045136
231 Ga0068860_100033717
232 Ga0097621_100033475
233 Ga0068871_100042638
234 Ga0075428_100104896
235 Ga0075433_10004134
236 Ga0075434_100016397
237 Ga0075434_100019891
238 Ga0068865_100008460
239 Ga0075435_100003716
240 Ga0075435_100076434
241 Ga0105240_10181355
242 Ga0111539_10156617
243 Ga0105247_10049663
244 Ga0114129_10106947
245 Ga0105241_10046855
246 Ga0105248_10018518
247 Ga0105237_10073563
248 Ga0105237_10122391
249 Ga0105249_10034835
250 Ga0105239_10013217
251 Ga0157373_10016101
252 Ga0157374_10017524
253 Ga0157374_10028311
254 Ga0157372_10023899
255 Ga0157372_10117024
256 Ga0157372_10129609
257 Ga0157372_10181978
258 Ga0157380_10000019
259 Ga0157380_10006254
260 Ga0157379_10106957
261 Ga0157379_10121157
262 Ga0224712_10003104
263 Ga0209257_1000231
264 Ga0207688_10001013
265 Ga0207643_10000266
266 Ga0207705_10056361
267 Ga0207684_10000638
268 Ga0207707_10107543
269 Ga0207671_10065379
270 Ga0207693_10024700
271 Ga0207652_10026407
272 Ga0207646_10068043
273 Ga0207659_10080209
274 Ga0207664_10004225
275 Ga0207711_10072620
276 Ga0207689_10003430
277 Ga0207667_10004977
278 Ga0207667_10134406
279 Ga0207658_10038723
280 Ga0207703_10081112
281 Ga0207639_10000625
282 Ga0207639_10011772
283 Ga0207639_10119034
284 Ga0207678_10000359
285 Ga0207702_10010668
286 Ga0207702_10021114
287 Ga0207641_10024914
288 Ga0207648_10042579
289 Ga0207676_10002781
290 Ga0207674_10009562
291 Ga0207674_10056560
292 Ga0207683_10003259
293 Ga0207698_10118971
294 Ga0268266_10010119
295 Ga0268264_10039325
296 Ga0265336_10008064
297 Ga0265328_10009928
298 Ga0265320_10015356
299 Ga0265339_10010418
300 Ga0265331_10000170
301 Ga0265331_10000456
302 Ga0265316_10022390
303 Ga0265316_10027647
304 Ga0265316_10047731
305 Ga0265313_10000602
306 Ga0265314_10007189
307 Ga0265314_10016547
308 Ga0265314_10017808
309 Ga0265314_10026184
310 Ga0265342_10000194
311 Ga0307414_10114370
312 Ga0373943_0021965
313 Ga0373955_0041011
314 Ga0373933_0000307
315 Ga0373925_0031575
316 Ga0395899_0000064
317 Ga0395898_0016490
318 Ga0395905_0000023
319 Ga0400490_40164
320 Ga0400483_036056
321 Ga0400487_21833
322 Ga0400487_25658
323 Ga0436361_0610429
324 Ga0439448_0002074
325 Ga0451577_0002088
326 Ga0451577_0061643
327 Ga0466972_0003328
328 Ga0453683_0010914
329 Ga0453684_0032242
330 Ga0453684_0048340
331 Ga0453684_0097505
332 Ga0451576_0000022
333 Ga0451576_0002698
334 Ga0495633_0000414
335 Ga0496102_0003877
336 Ga0496108_0071658
337 Ga0496112_0002861
338 Ga0496115_0029912
339 Ga0496117_0006682
340 Ga0496118_0000223
341 Ga0496121_0020046
342 Ga0496122_0001279
343 Ga0496123_0002035
344 Ga0501031_0001530
345 Ga0501031_0002666
346 Ga0501033_0000005
347 Ga0501033_0027156
348 Ga0501034_0000392
349 Ga0501034_0002948
350 Ga0501036_0007087
351 Ga0501036_0062368
352 Ga0501037_0000546
353 Ga0501038_0000369
354 Ga0501039_0012136
355 Ga0501043_0007008
356 Ga0501043_0010407
357 Ga0501046_0012946
358 Ga0501047_0012419
359 Ga0501073_0000311
360 Ga0501080_0003060
361 Ga0501080_0013267
362 Ga0501080_0025796
363 Ga0501035_0006598
364 Ga0501035_0007989
365 Ga0501044_0006718
366 Ga0501044_0023228
367 Ga0501045_0000117
368 nmdc:mga05p37_83644_c1
369 nmdc:mga08y16_4458_c1
370 nmdc:mga0a205_26300_c1
371 nmdc:mga0a205_76518_c1
372 Ga0500610_0000121
373 Ga0500651_0000884
374 2839991496

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13537

GATase_7

Glutamine amidotransferase domain

53

172

0.97

PF00733

Asn_synthase

Asparagine synthase

246

620

0.94

PF13522

GATase_6

Glutamine amidotransferase domain

32

166

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ct9-assembly2.cif.gz_C crystal structure of asparagine synthetase b from escherichia coli 0.8392 11 616
7ylz-assembly1.cif.gz_A unliganded form of hydroxyamidotransferase tsnb9 0.8382 1 612
7ylz-assembly2.cif.gz_B unliganded form of hydroxyamidotransferase tsnb9 0.828 1 610
7ylz-assembly1.cif.gz_A unliganded form of hydroxyamidotransferase tsnb9 0.8242 1 612
1ct9-assembly1.cif.gz_A crystal structure of asparagine synthetase b from escherichia coli 0.8235 8 616
ID Description Score Start End Superfamily
af_Q86A01_14_228_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9417 10 203 3.60.20.10
af_Q7KTW9_18_204_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9108 12 209 3.60.20.10
1ct9C01 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9082 11 214 3.60.20.10
af_P9WN33_15_198_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9078 1 158 3.60.20.10
af_P49090_1_193_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9018 14 214 3.60.20.10
ID Description Score Start End GO Terms
AF-A0A0G1XLY7-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9798 7 294 GO:0004066
GO:0005524
GO:0005829
GO:0006529
AF-A0A0A8REL6-F1-model_v4 deleted 0.9738 221 368
AF-A0A2V8L7M5-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9734 9 257 GO:0004066
GO:0005524
GO:0005829
GO:0006529
AF-A0A6L3ZNN1-F1-model_v4 deleted 0.9731 5 350
AF-A0A434CPC4-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9717 4 149 GO:0005829

Map