F287920

General Info

Members Datasets Scaffolds Average Seq Length
187 98 187 394

Family's Representative Sequence

Representative Sequence 3300031824|Ga0307413_10155472|Ga0307413_101554722
Length 432
Sequence MRELPPKRNQASGIQNIAVSANIGNIRSEPGEIALYVHWPFCVSKFPYCDFNSHVRASIDQAAWRDALLADLAHEASLLPGRRLTSIFFGGGTPSLMDPATVSAVLEAACGYWNPSADIEITLEANPNSVEADRFADLAAAGVNRLSLGLQSFDDKALAFLGRAHSALEGFAALETAQKTFRRVSFDLIYALPGETEDSWSATLAQALTLGTSHLSLYQLTIEPGTRFATMAAQGRLIPLDPDHAAALYELTDAMTSQAGLPAYEISNHARRGKESRHNLTYWRYGDYAGIGPGAHGRRLGMRTARHRKPENFLTAIRRNGHGIGEEAILLPAEAADEALVMGLRLTEGIDARALAARFGRKAIVDWRKVDRLVASGHLLRDGQRIAPTAQGRLLLDHILAEIAATAALPQSSPPEPPALLLEPLLAHSTAQ

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
90 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.81
Rhizosphere 95.19
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1009592 3300001915 Bacteria 1771
2 JGI24740J21852_10033637 3300001979 Bacteria 1624
3 JGI24735J21928_10014953 3300002067 Bacteria 2425
4 Ga0065712_10099485 3300005290 Bacteria 2090
5 Ga0070658_10014085 3300005327 Bacteria 6421
6 Ga0070658_10026509 3300005327 Bacteria 4650
7 Ga0070658_10142146 3300005327 Bacteria 2005
8 Ga0070683_100003328 3300005329 Bacteria 12997
9 Ga0070670_100018528 3300005331 Bacteria 5973
10 Ga0070680_100035712 3300005336 Bacteria 4013
11 Ga0070682_100014595 3300005337 Bacteria 4541
12 Ga0070660_100126746 3300005339 Bacteria 2040
13 Ga0070660_100158072 3300005339 Bacteria 1825
14 Ga0070691_10000548 3300005341 Bacteria 14241
15 Ga0070661_100004170 3300005344 Bacteria 9974
16 Ga0070661_100008999 3300005344 Bacteria 6909
17 Ga0070661_100051672 3300005344 Bacteria 3008
18 Ga0070661_100053892 3300005344 Bacteria 2945
19 Ga0070661_100068961 3300005344 Bacteria 2599
20 Ga0070669_100274844 3300005353 Bacteria 1348
21 Ga0070671_100006618 3300005355 Bacteria 9262
22 Ga0070671_100034771 3300005355 Bacteria 4173
23 Ga0070673_100054871 3300005364 Bacteria 3137
24 Ga0070673_100235620 3300005364 Bacteria 1589
25 Ga0070659_100005868 3300005366 Bacteria 8846
26 Ga0070659_100037330 3300005366 Bacteria 3787
27 Ga0070667_100016396 3300005367 Bacteria 6130
28 Ga0070663_100016030 3300005455 Bacteria 4853
29 Ga0070663_100083332 3300005455 Bacteria 2354
30 Ga0070678_100043738 3300005456 Bacteria 3193
31 Ga0070662_100023205 3300005457 Bacteria 4260
32 Ga0070662_100034122 3300005457 Bacteria 3586
33 Ga0070662_100043883 3300005457 Bacteria 3201
34 Ga0070662_100047693 3300005457 Bacteria 3083
35 Ga0070662_100120923 3300005457 Bacteria 2007
36 Ga0070679_100132702 3300005530 Bacteria 2471
37 Ga0070684_100005169 3300005535 Bacteria 9978
38 Ga0070684_100012155 3300005535 Bacteria 6885
39 Ga0068853_100032645 3300005539 Bacteria 4412
40 Ga0068853_100056101 3300005539 Bacteria 3396
41 Ga0068853_100076724 3300005539 Bacteria 2918
42 Ga0068853_100080598 3300005539 Bacteria 2849
43 Ga0068853_100108559 3300005539 Bacteria 2462
44 Ga0070672_100093145 3300005543 Bacteria 2433
45 Ga0068855_100106012 3300005563 Bacteria 3231
46 Ga0068855_100251511 3300005563 Bacteria 1971
47 Ga0068855_100256221 3300005563 Bacteria 1951
48 Ga0070664_100006860 3300005564 Bacteria 9185
49 Ga0070664_100035615 3300005564 Bacteria 4178
50 Ga0070664_100077854 3300005564 Bacteria 2851
51 Ga0070664_100148270 3300005564 Bacteria 2070
52 Ga0068857_100039579 3300005577 Bacteria 4176
53 Ga0068857_100205927 3300005577 Bacteria 1794
54 Ga0068854_100042272 3300005578 Bacteria 3225
55 Ga0068856_100025888 3300005614 Bacteria 5722
56 Ga0068856_100057038 3300005614 Bacteria 3855
57 Ga0068856_100174445 3300005614 Bacteria 2162
58 Ga0068856_100187872 3300005614 Bacteria 2080
59 Ga0068852_100006923 3300005616 Bacteria 8245
60 Ga0068852_100124088 3300005616 Bacteria 2369
61 Ga0068852_100149678 3300005616 Bacteria 2169
62 Ga0068851_10002906 3300005834 Bacteria 7568
63 Ga0068851_10057542 3300005834 Bacteria 1985
64 Ga0068858_100021573 3300005842 Bacteria 6020
65 Ga0068862_100107799 3300005844 Bacteria 2442
66 Ga0105240_10087644 3300009093 Bacteria 3811
67 Ga0105241_10102724 3300009174 Bacteria 2275
68 Ga0105248_10083234 3300009177 Bacteria 3599
69 Ga0105238_10007517 3300009551 Bacteria 10916
70 Ga0105238_10009822 3300009551 Bacteria 9583
71 Ga0157370_10002107 3300013104 Bacteria 24312
72 Ga0157370_10069331 3300013104 Bacteria 3331
73 Ga0157369_10003475 3300013105 Bacteria 18690
74 Ga0157369_10165385 3300013105 Bacteria 2333
75 Ga0157374_10125172 3300013296 Bacteria 2484
76 Ga0157372_10132848 3300013307 Bacteria 2865
77 Ga0207656_10035910 3300025321 Bacteria 2078
78 Ga0207682_10088626 3300025893 Bacteria 1338
79 Ga0207647_10005046 3300025904 Bacteria 9734
80 Ga0207705_10003467 3300025909 Bacteria 11996
81 Ga0207705_10004647 3300025909 Bacteria 10361
82 Ga0207705_10006119 3300025909 Bacteria 8954
83 Ga0207705_10006745 3300025909 Bacteria 8484
84 Ga0207705_10015406 3300025909 Bacteria 5486
85 Ga0207705_10016764 3300025909 Bacteria 5247
86 Ga0207705_10024214 3300025909 Bacteria 4332
87 Ga0207705_10026383 3300025909 Bacteria 4143
88 Ga0207707_10039718 3300025912 Bacteria 4113
89 Ga0207695_10011717 3300025913 Bacteria 10594
90 Ga0207657_10004553 3300025919 Bacteria 14654
91 Ga0207657_10008124 3300025919 Bacteria 10701
92 Ga0207657_10008351 3300025919 Bacteria 10517
93 Ga0207657_10009148 3300025919 Bacteria 9996
94 Ga0207657_10009723 3300025919 Bacteria 9643
95 Ga0207657_10021023 3300025919 Bacteria 6152
96 Ga0207649_10041653 3300025920 Bacteria 2796
97 Ga0207649_10075420 3300025920 Bacteria 2167
98 Ga0207649_10077883 3300025920 Bacteria 2138
99 Ga0207681_10071614 3300025923 Bacteria 2418
100 Ga0207650_10006586 3300025925 Bacteria 7920
101 Ga0207644_10001286 3300025931 Bacteria 16154
102 Ga0207690_10004043 3300025932 Bacteria 8662
103 Ga0207690_10007965 3300025932 Bacteria 6290
104 Ga0207706_10010477 3300025933 Bacteria 8471
105 Ga0207706_10054568 3300025933 Bacteria 3526
106 Ga0207706_10078267 3300025933 Bacteria 2908
107 Ga0207706_10123200 3300025933 Bacteria 2281
108 Ga0207661_10007654 3300025944 Bacteria 7684
109 Ga0207679_10019553 3300025945 Bacteria 4552
110 Ga0207679_10143517 3300025945 Bacteria 1933
111 Ga0207679_10298750 3300025945 Bacteria 1387
112 Ga0207667_10042952 3300025949 Bacteria 4800
113 Ga0207667_10129481 3300025949 Bacteria 2599
114 Ga0207640_10059477 3300025981 Bacteria 2522
115 Ga0207640_10077773 3300025981 Bacteria 2256
116 Ga0207640_10116255 3300025981 Bacteria 1906
117 Ga0207703_10002562 3300026035 Bacteria 15697
118 Ga0207639_10024397 3300026041 Bacteria 4376
119 Ga0207678_10004587 3300026067 Bacteria 12421
120 Ga0207678_10037122 3300026067 Bacteria 4240
121 Ga0207678_10071118 3300026067 Bacteria 2983
122 Ga0207678_10124214 3300026067 Bacteria 2202
123 Ga0207678_10207545 3300026067 Bacteria 1676
124 Ga0207702_10005305 3300026078 Bacteria 11307
125 Ga0207702_10102153 3300026078 Bacteria 2533
126 Ga0207676_10191197 3300026095 Bacteria 1801
127 Ga0207674_10012577 3300026116 Bacteria 9457
128 Ga0207683_10003597 3300026121 Bacteria 13507
129 Ga0207698_10008877 3300026142 Bacteria 6374
130 Ga0207698_10057906 3300026142 Bacteria 3000
131 Ga0207698_10136877 3300026142 Bacteria 2103
132 Ga0207698_10331844 3300026142 Bacteria 1429
133 Ga0268266_10038407 3300028379 Bacteria 4076
134 Ga0268265_10075644 3300028380 Bacteria 2638
135 Ga0268265_10187448 3300028380 Bacteria 1783
136 Ga0307408_100160511 3300031548 Bacteria 1785
137 Ga0307405_10111095 3300031731 Bacteria 1857
138 Ga0307413_10155472 3300031824 Bacteria 1599
139 Ga0307410_10027191 3300031852 Bacteria 3613
140 Ga0307409_100159828 3300031995 Bacteria 1969
141 Ga0307416_100093852 3300032002 Bacteria 2586
142 Ga0307416_100476864 3300032002 Bacteria 1307
143 Ga0307414_10155840 3300032004 Bacteria 1808
144 Ga0307411_10077975 3300032005 Bacteria 2270
145 Ga0307411_10109022 3300032005 Bacteria 1976
146 Ga0395899_0001998 3300037312 Bacteria 16798
147 Ga0395899_0007855 3300037312 Bacteria 8221
148 Ga0395899_0026723 3300037312 Bacteria 4354
149 Ga0395900_0004824 3300037418 Bacteria 14205
150 Ga0395900_0008812 3300037418 Bacteria 10363
151 Ga0395900_0017508 3300037418 Bacteria 7312
152 Ga0395900_0020984 3300037418 Bacteria 6676
153 Ga0395900_0227988 3300037418 Bacteria 1875
154 Ga0395898_0012393 3300037466 Bacteria 8814
155 Ga0395898_0043914 3300037466 Bacteria 4403
156 Ga0395905_0004997 3300037471 Bacteria 13667
157 Ga0395905_0012395 3300037471 Bacteria 8206
158 Ga0395905_0032998 3300037471 Bacteria 4867
159 Ga0395905_0037358 3300037471 Bacteria 4560
160 Ga0395905_0063282 3300037471 Bacteria 3461
161 Ga0395905_0074027 3300037471 Bacteria 3192
162 Ga0395901_0007940 3300038443 Bacteria 10706
163 Ga0395901_0012762 3300038443 Bacteria 8522
164 Ga0395901_0019760 3300038443 Bacteria 6888
165 Ga0466966_0045567 3300044684 Bacteria 2803
166 Ga0466961_0043056 3300044693 Bacteria 2892
167 Ga0466963_0011696 3300044694 Bacteria 5349
168 Ga0466957_0022314 3300044842 Bacteria 3734
169 Ga0466959_0022868 3300045049 Bacteria 4621
170 Ga0466958_0060815 3300045836 Bacteria 2300
171 Ga0466958_0118473 3300045836 Bacteria 1656
172 Ga0466967_0103119 3300045976 Bacteria 2610
173 Ga0495669_0001193 3300046684 Bacteria 10803
174 Ga0495669_0006848 3300046684 Bacteria 4769
175 Ga0495669_0010538 3300046684 Bacteria 3909
176 Ga0495669_0064236 3300046684 Bacteria 1665
177 Ga0496101_0108841 3300048904 Bacteria 2084
178 Ga0496108_0006420 3300048911 Bacteria 9533
179 Ga0496109_0171319 3300048912 Bacteria 2037
180 Ga0496110_0025689 3300048913 Bacteria 5036
181 Ga0496111_0008637 3300048914 Bacteria 6755
182 Ga0496112_0030633 3300048915 Bacteria 5209
183 Ga0496112_0105970 3300048915 Bacteria 2781
184 Ga0496112_0212947 3300048915 Bacteria 1889
185 Ga0496113_0003817 3300048916 Bacteria 9118
186 Ga0501080_0025333 3300049742 Bacteria 5504
187 Ga0466962_0031930 3300061719 Bacteria 2521

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013104 Ga0157370_10002107 Ga0157370_1000210722 347
2 3300005331 Ga0070670_100018528 Ga0070670_1000185282 377
3 3300025925 Ga0207650_10006586 Ga0207650_100065867 377
4 3300005290 Ga0065712_10099485 Ga0065712_100994852 378
5 3300005353 Ga0070669_100274844 Ga0070669_1002748442 378
6 3300005355 Ga0070671_100034771 Ga0070671_1000347715 378
7 3300005364 Ga0070673_100054871 Ga0070673_1000548713 378
8 3300005457 Ga0070662_100043883 Ga0070662_1000438832 378
9 3300025923 Ga0207681_10071614 Ga0207681_100716143 378
10 3300025933 Ga0207706_10054568 Ga0207706_100545683 378
11 3300031548 Ga0307408_100160511 Ga0307408_1001605111 378
12 3300031731 Ga0307405_10111095 Ga0307405_101110953 378
13 3300031852 Ga0307410_10027191 Ga0307410_100271913 378
14 3300031995 Ga0307409_100159828 Ga0307409_1001598282 378
15 3300032002 Ga0307416_100093852 Ga0307416_1000938522 378
16 3300032002 Ga0307416_100476864 Ga0307416_1004768641 378
17 3300032004 Ga0307414_10155840 Ga0307414_101558402 378
18 3300032005 Ga0307411_10109022 Ga0307411_101090222 378
19 3300044693 Ga0466961_0043056 Ga0466961_0043056_1275_2429 382
20 3300044842 Ga0466957_0022314 Ga0466957_0022314_561_1715 382
21 3300061719 Ga0466962_0031930 Ga0466962_0031930_1210_2364 382
22 3300005327 Ga0070658_10014085 Ga0070658_100140857 385
23 3300005367 Ga0070667_100016396 Ga0070667_1000163967 385
24 3300005614 Ga0068856_100025888 Ga0068856_1000258885 385
25 3300025909 Ga0207705_10015406 Ga0207705_100154067 385
26 3300005355 Ga0070671_100006618 Ga0070671_1000066187 386
27 3300005364 Ga0070673_100235620 Ga0070673_1002356202 386
28 3300005457 Ga0070662_100023205 Ga0070662_1000232052 386
29 3300005539 Ga0068853_100032645 Ga0068853_1000326453 386
30 3300005563 Ga0068855_100106012 Ga0068855_1001060122 386
31 3300005616 Ga0068852_100006923 Ga0068852_1000069239 386
32 3300009551 Ga0105238_10007517 Ga0105238_100075179 386
33 3300013105 Ga0157369_10003475 Ga0157369_1000347519 386
34 3300025909 Ga0207705_10016764 Ga0207705_100167644 386
35 3300025931 Ga0207644_10001286 Ga0207644_1000128618 386
36 3300025933 Ga0207706_10078267 Ga0207706_100782673 386
37 3300026121 Ga0207683_10003597 Ga0207683_100035979 386
38 3300037418 Ga0395900_0008812 Ga0395900_0008812_4423_5586 386
39 3300037471 Ga0395905_0004997 Ga0395905_0004997_4727_5890 386
40 3300045836 Ga0466958_0118473 Ga0466958_0118473_419_1582 386
41 3300005339 Ga0070660_100126746 Ga0070660_1001267462 387
42 3300005344 Ga0070661_100008999 Ga0070661_1000089996 387
43 3300005344 Ga0070661_100051672 Ga0070661_1000516722 387
44 3300005344 Ga0070661_100053892 Ga0070661_1000538923 387
45 3300005366 Ga0070659_100005868 Ga0070659_1000058686 387
46 3300005456 Ga0070678_100043738 Ga0070678_1000437383 387
47 3300005457 Ga0070662_100034122 Ga0070662_1000341224 387
48 3300005457 Ga0070662_100120923 Ga0070662_1001209232 387
49 3300005539 Ga0068853_100076724 Ga0068853_1000767243 387
50 3300005539 Ga0068853_100080598 Ga0068853_1000805983 387
51 3300005543 Ga0070672_100093145 Ga0070672_1000931452 387
52 3300005563 Ga0068855_100256221 Ga0068855_1002562211 387
53 3300005564 Ga0070664_100006860 Ga0070664_1000068604 387
54 3300005564 Ga0070664_100077854 Ga0070664_1000778542 387
55 3300005564 Ga0070664_100148270 Ga0070664_1001482701 387
56 3300005577 Ga0068857_100039579 Ga0068857_1000395793 387
57 3300005614 Ga0068856_100057038 Ga0068856_1000570384 387
58 3300005614 Ga0068856_100187872 Ga0068856_1001878723 387
59 3300005616 Ga0068852_100124088 Ga0068852_1001240882 387
60 3300005834 Ga0068851_10057542 Ga0068851_100575422 387
61 3300005842 Ga0068858_100021573 Ga0068858_1000215734 387
62 3300005844 Ga0068862_100107799 Ga0068862_1001077992 387
63 3300009177 Ga0105248_10083234 Ga0105248_100832345 387
64 3300013296 Ga0157374_10125172 Ga0157374_101251723 387
65 3300025321 Ga0207656_10035910 Ga0207656_100359103 387
66 3300025893 Ga0207682_10088626 Ga0207682_100886262 387
67 3300025909 Ga0207705_10004647 Ga0207705_100046477 387
68 3300025909 Ga0207705_10006119 Ga0207705_100061194 387
69 3300025909 Ga0207705_10006745 Ga0207705_100067457 387
70 3300025909 Ga0207705_10024214 Ga0207705_100242141 387
71 3300025912 Ga0207707_10039718 Ga0207707_100397183 387
72 3300025919 Ga0207657_10004553 Ga0207657_100045538 387
73 3300025919 Ga0207657_10008124 Ga0207657_1000812410 387
74 3300025919 Ga0207657_10009148 Ga0207657_1000914812 387
75 3300025920 Ga0207649_10075420 Ga0207649_100754201 387
76 3300025920 Ga0207649_10077883 Ga0207649_100778832 387
77 3300025932 Ga0207690_10004043 Ga0207690_100040435 387
78 3300025933 Ga0207706_10010477 Ga0207706_100104775 387
79 3300025944 Ga0207661_10007654 Ga0207661_100076543 387
80 3300025945 Ga0207679_10019553 Ga0207679_100195535 387
81 3300025945 Ga0207679_10143517 Ga0207679_101435172 387
82 3300025945 Ga0207679_10298750 Ga0207679_102987501 387
83 3300025981 Ga0207640_10059477 Ga0207640_100594773 387
84 3300025981 Ga0207640_10116255 Ga0207640_101162552 387
85 3300026035 Ga0207703_10002562 Ga0207703_1000256217 387
86 3300026067 Ga0207678_10004587 Ga0207678_100045878 387
87 3300026067 Ga0207678_10207545 Ga0207678_102075452 387
88 3300026142 Ga0207698_10008877 Ga0207698_100088772 387
89 3300026142 Ga0207698_10331844 Ga0207698_103318441 387
90 3300028379 Ga0268266_10038407 Ga0268266_100384073 387
91 3300028380 Ga0268265_10075644 Ga0268265_100756442 387
92 3300028380 Ga0268265_10187448 Ga0268265_101874482 387
93 3300031824 Ga0307413_10155472 Ga0307413_101554722 387
94 3300032005 Ga0307411_10077975 Ga0307411_100779752 387
95 3300037312 Ga0395899_0001998 Ga0395899_0001998_5408_6589 387
96 3300037312 Ga0395899_0007855 Ga0395899_0007855_5381_6544 387
97 3300037312 Ga0395899_0026723 Ga0395899_0026723_2154_3389 387
98 3300037418 Ga0395900_0004824 Ga0395900_0004824_5409_6590 387
99 3300037418 Ga0395900_0017508 Ga0395900_0017508_3345_4517 387
100 3300037418 Ga0395900_0020984 Ga0395900_0020984_1356_2519 387
101 3300037466 Ga0395898_0012393 Ga0395898_0012393_3906_5087 387
102 3300037466 Ga0395898_0043914 Ga0395898_0043914_1680_2843 387
103 3300037471 Ga0395905_0012395 Ga0395905_0012395_3209_4390 387
104 3300037471 Ga0395905_0037358 Ga0395905_0037358_470_1642 387
105 3300037471 Ga0395905_0063282 Ga0395905_0063282_1708_2982 387
106 3300037471 Ga0395905_0074027 Ga0395905_0074027_225_1412 387
107 3300038443 Ga0395901_0007940 Ga0395901_0007940_5409_6590 387
108 3300038443 Ga0395901_0012762 Ga0395901_0012762_3842_5014 387
109 3300038443 Ga0395901_0019760 Ga0395901_0019760_2998_4161 387
110 3300044694 Ga0466963_0011696 Ga0466963_0011696_1397_2671 387
111 3300045836 Ga0466958_0060815 Ga0466958_0060815_1030_2193 387
112 3300045976 Ga0466967_0103119 Ga0466967_0103119_1267_2541 387
113 3300046684 Ga0495669_0001193 Ga0495669_0001193_4568_5734 387
114 3300046684 Ga0495669_0006848 Ga0495669_0006848_3544_4719 387
115 3300046684 Ga0495669_0010538 Ga0495669_0010538_860_2050 387
116 3300046684 Ga0495669_0064236 Ga0495669_0064236_99_1265 387
117 3300048904 Ga0496101_0108841 Ga0496101_0108841_507_1697 387
118 3300048911 Ga0496108_0006420 Ga0496108_0006420_4737_5927 387
119 3300048912 Ga0496109_0171319 Ga0496109_0171319_136_1326 387
120 3300048913 Ga0496110_0025689 Ga0496110_0025689_543_1733 387
121 3300048914 Ga0496111_0008637 Ga0496111_0008637_1449_2639 387
122 3300048915 Ga0496112_0030633 Ga0496112_0030633_3831_5021 387
123 3300048915 Ga0496112_0105970 Ga0496112_0105970_819_1982 387
124 3300048915 Ga0496112_0212947 Ga0496112_0212947_12_1202 387
125 3300048916 Ga0496113_0003817 Ga0496113_0003817_6807_7997 387
126 3300049742 Ga0501080_0025333 Ga0501080_0025333_2132_3298 387
127 3300026095 Ga0207676_10191197 Ga0207676_101911972 389
128 3300044684 Ga0466966_0045567 Ga0466966_0045567_1493_2686 390
129 3300045049 Ga0466959_0022868 Ga0466959_0022868_184_1377 390
130 3300001915 JGI24741J21665_1009592 JGI24741J21665_10095922 392
131 3300001979 JGI24740J21852_10033637 JGI24740J21852_100336372 392
132 3300002067 JGI24735J21928_10014953 JGI24735J21928_100149532 392
133 3300005327 Ga0070658_10026509 Ga0070658_100265095 392
134 3300005327 Ga0070658_10142146 Ga0070658_101421463 392
135 3300005329 Ga0070683_100003328 Ga0070683_1000033287 392
136 3300005336 Ga0070680_100035712 Ga0070680_1000357123 392
137 3300005337 Ga0070682_100014595 Ga0070682_1000145955 392
138 3300005339 Ga0070660_100158072 Ga0070660_1001580722 392
139 3300005341 Ga0070691_10000548 Ga0070691_100005487 392
140 3300005344 Ga0070661_100004170 Ga0070661_1000041702 392
141 3300005344 Ga0070661_100068961 Ga0070661_1000689613 392
142 3300005366 Ga0070659_100037330 Ga0070659_1000373302 392
143 3300005455 Ga0070663_100016030 Ga0070663_1000160305 392
144 3300005455 Ga0070663_100083332 Ga0070663_1000833323 392
145 3300005457 Ga0070662_100047693 Ga0070662_1000476932 392
146 3300005530 Ga0070679_100132702 Ga0070679_1001327023 392
147 3300005535 Ga0070684_100005169 Ga0070684_1000051692 392
148 3300005535 Ga0070684_100012155 Ga0070684_1000121552 392
149 3300005539 Ga0068853_100056101 Ga0068853_1000561013 392
150 3300005539 Ga0068853_100108559 Ga0068853_1001085592 392
151 3300005563 Ga0068855_100251511 Ga0068855_1002515112 392
152 3300005564 Ga0070664_100035615 Ga0070664_1000356152 392
153 3300005577 Ga0068857_100205927 Ga0068857_1002059272 392
154 3300005578 Ga0068854_100042272 Ga0068854_1000422724 392
155 3300005614 Ga0068856_100174445 Ga0068856_1001744452 392
156 3300005616 Ga0068852_100149678 Ga0068852_1001496782 392
157 3300005834 Ga0068851_10002906 Ga0068851_100029066 392
158 3300009093 Ga0105240_10087644 Ga0105240_100876444 392
159 3300009174 Ga0105241_10102724 Ga0105241_101027243 392
160 3300009551 Ga0105238_10009822 Ga0105238_100098227 392
161 3300013104 Ga0157370_10069331 Ga0157370_100693313 392
162 3300013105 Ga0157369_10165385 Ga0157369_101653853 392
163 3300013307 Ga0157372_10132848 Ga0157372_101328483 392
164 3300025904 Ga0207647_10005046 Ga0207647_100050468 392
165 3300025909 Ga0207705_10003467 Ga0207705_1000346715 392
166 3300025909 Ga0207705_10026383 Ga0207705_100263832 392
167 3300025913 Ga0207695_10011717 Ga0207695_100117175 392
168 3300025919 Ga0207657_10008351 Ga0207657_100083516 392
169 3300025919 Ga0207657_10009723 Ga0207657_100097238 392
170 3300025919 Ga0207657_10021023 Ga0207657_100210234 392
171 3300025920 Ga0207649_10041653 Ga0207649_100416532 392
172 3300025932 Ga0207690_10007965 Ga0207690_100079658 392
173 3300025933 Ga0207706_10123200 Ga0207706_101232002 392
174 3300025949 Ga0207667_10042952 Ga0207667_100429525 392
175 3300025949 Ga0207667_10129481 Ga0207667_101294812 392
176 3300025981 Ga0207640_10077773 Ga0207640_100777732 392
177 3300026041 Ga0207639_10024397 Ga0207639_100243972 392
178 3300026067 Ga0207678_10037122 Ga0207678_100371223 392
179 3300026067 Ga0207678_10071118 Ga0207678_100711183 392
180 3300026067 Ga0207678_10124214 Ga0207678_101242143 392
181 3300026078 Ga0207702_10005305 Ga0207702_100053054 392
182 3300026078 Ga0207702_10102153 Ga0207702_101021532 392
183 3300026116 Ga0207674_10012577 Ga0207674_100125773 392
184 3300026142 Ga0207698_10057906 Ga0207698_100579062 392
185 3300026142 Ga0207698_10136877 Ga0207698_101368773 392
186 3300037418 Ga0395900_0227988 Ga0395900_0227988_630_1838 392
187 3300037471 Ga0395905_0032998 Ga0395905_0032998_128_1306 392

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06969

HemN_C

HemN C-terminal domain

330

395

0.97

PF04055

Radical_SAM

Radical SAM superfamily

36

207

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.8017 10 379
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.7602 10 379
8asv-assembly1.cif.gz_C cryo-em structure of yeast elongator complex 0.7129 9 232
3t7v-assembly1.cif.gz_A crystal structure of methylornithine synthase (pylb) 0.7032 11 204
6rfu-assembly1.cif.gz_A in cellulo crystallization of trypanosoma brucei imp dehydrogenase enables the identification of atp and gmp as genuine co-factors 0.7032 62 165
ID Description Score Start End Superfamily
af_Q5SUV1_33_283_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9234 9 252 3.20.20.70
af_A4IGH2_157_284_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9147 125 249 3.30.750.200
af_Q5SUV1_33_283_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8956 9 252 3.20.20.70
af_Q9HA92_43_208_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8928 14 174 3.20.20.70
af_P52062_9_222_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8922 14 222 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A3M1PTH2-F1-model_v4 Radical SAM protein 0.9603 37 169 GO:0003824
GO:0005737
GO:0006779
GO:0051539
AF-A0A2W5C2G4-F1-model_v4 deleted 0.9536 10 236
AF-A0A2D7C169-F1-model_v4 Heme chaperone HemW 0.9427 9 383 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539
AF-A0A3D2BRQ0-F1-model_v4 Heme chaperone HemW 0.9404 9 385 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539
AF-A0A2E3K4G8-F1-model_v4 Heme chaperone HemW 0.9391 9 381 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
83.19 0.84 High
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Predicted Structure (AlphaFold2)

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