F288227

General Info

Members Datasets Scaffolds Average Seq Length
187 116 374 569

Family's Representative Sequence

Representative Sequence 3300046665|Ga0495661_0056596|Ga0495661_0056596_190_2031
Length 605
Sequence MLNKTPMLFGTRDEKKFCITCTNTRYNQRVWRTSLLSIVQNGGAFLLASFLIFLASTGTYAQGPKGPTSNQPYPQNYFRYPLDLPPSTAGSFGELRPSHFHSGLDFKTNQRTGYPVHAVFDGYVSRLRIQFGGFGQALYITHPNGYTSVYGHIASFTPEVAKYIRDYQYKNQTFEADIPVPAGLFHVCKDDVVAVSGNEGASAGPHLHFEIRDTLTEETINPQLFGLTIPDKIPPTITSIGIYNLNGNPFSEKTPRKFLAITGAAGHYRLLKPQVLNLTGNIGFGIGVTDMNSSSMNRNGIYSLELKLDGRIVYSFAVERFAFDQTHAINAYIDYPAFLTSRRWMQKCFILPGSRIPLYPQSINHGIIAFNDNAEHEVEYVVKDVAGNTSSLTVKVKSSPSNITPDKPAGTLFHFDQKSEFSNDKVKVTIVPGNLYDDLDFIYSAQPAKPGAFSLTHRIHNRLTPIHDGYDLWIKPDINLGAYADKAIIINAASGSIGGLYENGYVKAVAHSFGDYYIKIDTVPPVIKPLNITNGSNMRVSKSLSGVKSYTGKIDGKWVLMEWRYKTKILSYTFNNDIAPGKHNFELVVVDGKNNTSTYTAEFNR

Samples

Sample ID Description Type Environment
1 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
43 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
47 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
48 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
71 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
72 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
81 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
82 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
85 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
86 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
87 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
88 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
91 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
92 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
93 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
94 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
95 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
96 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
97 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
98 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
99 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
100 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
101 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
102 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
103 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
104 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
105 2738541283 Pedobacter sp. OK701 Isolate Unclassified
106 2738541284 Pedobacter sp. YR016 Isolate Unclassified
107 2738543023 Pedobacter sp. OK628 Isolate Unclassified
108 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
109 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
110 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
111 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
112 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
113 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
114 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
115 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
116 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.05
Metatranscriptomes 0
Isolates 6.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.16
Nodule 0
Rhizoplane 0.53
Rhizosphere 81.28
Stem 0
Stem Tuber 0
Unclassified 1.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495661_0056596 3300046665 Bacteria 2345
2 SwRhRL2b_contig_2739513 2162886007 Bacteria 11488
3 JGI24737J22298_10000071 3300001990 Bacteria 29829
4 JGI24737J22298_10004777 3300001990 Bacteria 4705
5 JGI24735J21928_10000013 3300002067 Bacteria 208663
6 JGI25162J39368_1000107 3300002737 Bacteria 90782
7 JGI25162J39368_1000615 3300002737 Bacteria 25611
8 JGI25164J39214_1001377 3300002772 Bacteria 5829
9 JGI25165J46597_1000157 3300003214 Bacteria 108987
10 rootH2_10005336 3300003320 Bacteria 90063
11 rootH2_10025125 3300003320 Bacteria 4206
12 rootH2_10071606 3300003320 Bacteria 5560
13 rootH1_10027348 3300003323 Bacteria 4194
14 rootH1_10076895 3300003323 Bacteria 5837
15 Ga0065714_10002412 3300005288 Bacteria 18872
16 Ga0065714_10002827 3300005288 Bacteria 10778
17 Ga0065714_10003725 3300005288 Bacteria 8045
18 Ga0065714_10065215 3300005288 Bacteria 11814
19 Ga0065714_10074264 3300005288 Bacteria 3062
20 Ga0065704_10071014 3300005289 Bacteria 13752
21 Ga0070658_10000014 3300005327 Bacteria 244978
22 Ga0070676_10000729 3300005328 Bacteria 16102
23 Ga0070673_100001650 3300005364 Bacteria 13228
24 Ga0070662_100000014 3300005457 Bacteria 110124
25 Ga0070681_10003892 3300005458 Bacteria 14063
26 Ga0068867_100001403 3300005459 Bacteria 16639
27 Ga0068853_100003643 3300005539 Bacteria 11812
28 Ga0068853_100015859 3300005539 Bacteria 6189
29 Ga0070672_100016971 3300005543 Bacteria 5227
30 Ga0070665_100000032 3300005548 Bacteria 333352
31 Ga0068855_100000049 3300005563 Bacteria 145321
32 Ga0068855_100000458 3300005563 Bacteria 50148
33 Ga0068855_100097119 3300005563 Bacteria 3393
34 Ga0068857_100067266 3300005577 Bacteria 3189
35 Ga0068856_100000191 3300005614 Bacteria 64613
36 Ga0068856_100003417 3300005614 Bacteria 16061
37 Ga0068856_100086532 3300005614 Bacteria 3114
38 Ga0068852_100045319 3300005616 Bacteria 3740
39 Ga0075366_10002239 3300006195 Bacteria 9880
40 Ga0075366_10010332 3300006195 Bacteria 5240
41 Ga0097621_100003150 3300006237 Bacteria 11325
42 Ga0068871_100000306 3300006358 Bacteria 34178
43 Ga0068865_100000271 3300006881 Bacteria 28407
44 Ga0105240_10000010 3300009093 Bacteria 537830
45 Ga0105240_10073975 3300009093 Bacteria 4207
46 Ga0105241_10037743 3300009174 Bacteria 3639
47 Ga0105237_10000578 3300009545 Bacteria 51257
48 Ga0105237_10000844 3300009545 Bacteria 41756
49 Ga0105237_10001048 3300009545 Bacteria 37140
50 Ga0105237_10001711 3300009545 Bacteria 28390
51 Ga0105237_10008085 3300009545 Bacteria 11437
52 Ga0105237_10008956 3300009545 Bacteria 10774
53 Ga0105237_10047397 3300009545 Bacteria 4320
54 Ga0105238_10044762 3300009551 Bacteria 4473
55 Ga0105239_10000007 3300010375 Bacteria 385297
56 Ga0105239_10000212 3300010375 Bacteria 85747
57 Ga0105239_10000352 3300010375 Bacteria 67522
58 Ga0105239_10005942 3300010375 Bacteria 14203
59 Ga0105239_10011856 3300010375 Bacteria 9725
60 Ga0105239_10060019 3300010375 Bacteria 4173
61 Ga0105239_10115215 3300010375 Bacteria 2982
62 Ga0157373_10000031 3300013100 Bacteria 126446
63 Ga0157373_10000881 3300013100 Bacteria 23243
64 Ga0157373_10007395 3300013100 Bacteria 8173
65 Ga0157371_10000689 3300013102 Bacteria 39887
66 Ga0157371_10001485 3300013102 Bacteria 24261
67 Ga0157371_10002152 3300013102 Bacteria 19201
68 Ga0157371_10013541 3300013102 Bacteria 6191
69 Ga0157371_10044143 3300013102 Bacteria 3174
70 Ga0157370_10000197 3300013104 Bacteria 75846
71 Ga0157370_10008599 3300013104 Bacteria 10993
72 Ga0157370_10074367 3300013104 Bacteria 3205
73 Ga0157369_10114921 3300013105 Bacteria 2858
74 Ga0157374_10001060 3300013296 Bacteria 23873
75 Ga0157374_10002738 3300013296 Bacteria 14800
76 Ga0163162_10011830 3300013306 Bacteria 8513
77 Ga0163162_10024006 3300013306 Bacteria 6018
78 Ga0157372_10000173 3300013307 Bacteria 71416
79 Ga0157372_10002719 3300013307 Bacteria 19140
80 Ga0157372_10009261 3300013307 Bacteria 10472
81 Ga0157372_10010028 3300013307 Bacteria 10074
82 Ga0157375_10039278 3300013308 Bacteria 4554
83 Ga0157375_10050446 3300013308 Bacteria 4082
84 Ga0182008_10000024 3300014497 Bacteria 199978
85 Ga0182008_10001883 3300014497 Bacteria 13641
86 Ga0182006_1000373 3300015261 Bacteria 37119
87 Ga0163161_10001209 3300017792 Bacteria 19448
88 Ga0207427_100025 3300025231 Bacteria 433726
89 Ga0209437_100010 3300025233 Bacteria 838447
90 Ga0209437_100148 3300025233 Bacteria 158795
91 Ga0209233_1000017 3300025261 Bacteria 898076
92 Ga0209233_1001980 3300025261 Bacteria 7776
93 Ga0209455_1002984 3300025272 Bacteria 6221
94 Ga0207647_10000366 3300025904 Bacteria 36781
95 Ga0207647_10000680 3300025904 Bacteria 26722
96 Ga0207645_10000591 3300025907 Bacteria 30054
97 Ga0207705_10000107 3300025909 Bacteria 94984
98 Ga0207707_10003005 3300025912 Bacteria 14994
99 Ga0207695_10000019 3300025913 Bacteria 732137
100 Ga0207695_10036696 3300025913 Bacteria 5295
101 Ga0207671_10002404 3300025914 Bacteria 20077
102 Ga0207671_10002702 3300025914 Bacteria 18606
103 Ga0207671_10003730 3300025914 Bacteria 15012
104 Ga0207671_10014749 3300025914 Bacteria 6161
105 Ga0207671_10033798 3300025914 Bacteria 3804
106 Ga0207694_10102666 3300025924 Bacteria 2267
107 Ga0207706_10000057 3300025933 Bacteria 112805
108 Ga0207704_10001974 3300025938 Bacteria 9198
109 Ga0207661_10004099 3300025944 Bacteria 10186
110 Ga0207667_10000015 3300025949 Bacteria 417534
111 Ga0207667_10002856 3300025949 Bacteria 21432
112 Ga0207651_10001477 3300025960 Bacteria 10705
113 Ga0207639_10103403 3300026041 Bacteria 2308
114 Ga0207702_10003768 3300026078 Bacteria 13697
115 Ga0207702_10007581 3300026078 Bacteria 9240
116 Ga0207702_10064488 3300026078 Bacteria 3135
117 Ga0207648_10005635 3300026089 Bacteria 12581
118 Ga0207674_10066526 3300026116 Bacteria 3630
119 Ga0207698_10050866 3300026142 Bacteria 3164
120 Ga0268266_10000030 3300028379 Bacteria 417120
121 Ga0307517_10001373 3300028786 Bacteria 40930
122 Ga0307515_10001837 3300028794 Bacteria 47323
123 Ga0307408_100000919 3300031548 Bacteria 22963
124 Ga0307408_100001075 3300031548 Bacteria 20928
125 Ga0307408_100006564 3300031548 Bacteria 7712
126 Ga0307412_10000030 3300031911 Bacteria 208541
127 Ga0307414_10010616 3300032004 Bacteria 5355
128 Ga0307414_10063964 3300032004 Bacteria 2617
129 Ga0307507_10000032 3300033179 Bacteria 194155
130 Ga0395899_0000002 3300037312 Bacteria 1324310
131 Ga0395900_0000284 3300037418 Bacteria 75852
132 Ga0395900_0039515 3300037418 Bacteria 4862
133 Ga0395898_0192070 3300037466 Unclassified 1951
134 Ga0395905_0002359 3300037471 Bacteria 21041
135 Ga0395901_0077638 3300038443 Bacteria 3466
136 Ga0395901_0155001 3300038443 Bacteria 2406
137 Ga0439448_0001170 3300042005 Bacteria 6661
138 Ga0495651_0037266 3300046462 Bacteria 3786
139 Ga0495650_0000162 3300046471 Bacteria 148927
140 Ga0495585_0000153 3300046492 Bacteria 74267
141 Ga0495585_0000240 3300046492 Bacteria 56802
142 Ga0495606_0000033 3300046507 Bacteria 247739
143 Ga0495606_0030822 3300046507 Bacteria 3740
144 Ga0495606_0036119 3300046507 Bacteria 3370
145 Ga0495610_0013903 3300046512 Bacteria 4755
146 Ga0495616_0013970 3300046513 Bacteria 4511
147 Ga0495616_0021699 3300046513 Bacteria 3473
148 Ga0495644_0014739 3300046523 Unclassified 2993
149 Ga0495609_0006455 3300046538 Bacteria 5981
150 Ga0495633_0011234 3300046558 Bacteria 4840
151 Ga0495668_0000009 3300046616 Bacteria 492623
152 Ga0495625_0000131 3300046660 Bacteria 117738
153 Ga0495625_0000951 3300046660 Bacteria 38714
154 Ga0495625_0014454 3300046660 Bacteria 6299
155 Ga0495625_0040168 3300046660 Bacteria 3415
156 Ga0495625_0074161 3300046660 Bacteria 2384
157 Ga0495661_0000134 3300046665 Bacteria 87487
158 Ga0495661_0003857 3300046665 Bacteria 10954
159 Ga0495649_0000009 3300046694 Bacteria 451725
160 Ga0495683_0023267 3300047323 Unclassified 3185
161 Ga0495687_003112 3300047443 Bacteria 12401
162 Ga0495686_0000843 3300047472 Bacteria 39372
163 Ga0495686_0039567 3300047472 Bacteria 3011
164 Ga0496122_0003056 3300048925 Bacteria 22633
165 Ga0496123_0018184 3300048926 Bacteria 5606
166 Ga0495678_009913 3300049459 Bacteria 4670
167 Ga0501223_000668 3300049663 Bacteria 8215
168 nmdc:mga0k408_320_c1 3300050493 Bacteria 26097
169 nmdc:mga0k408_3699_c1 3300050493 Bacteria 8102
170 Ga0500651_0000462 3300053093 Bacteria 21501
171 Ga0500608_004337 3300053122 Bacteria 5474
172 Ga0500618_000029 3300053125 Bacteria 131691
173 Ga0500622_0017031 3300053156 Bacteria 3874
174 Ga0500624_000118 3300053157 Bacteria 35980
175 2599480420 2599185184 Bacteria 6430550
176 2738755429 2738541283 Bacteria 7222293
177 2738763515 2738541284 Bacteria 5199923
178 2739303262 2738543023 Bacteria 6767879
179 2852626773 2852623160 Bacteria 4376875
180 2852629373 2852627209 Bacteria 5896285
181 2884933998 2884933994 Bacteria 4535041
182 2919190285 2919186247 Bacteria 6244071
183 2919438276 2919437846 Bacteria 6199444
184 2928083339 2928078545 Bacteria 6534839
185 2928151399 2928147474 Bacteria 6512076
186 2932087318 2932082852 Bacteria 6563563
187 2939668566 2939664404 Bacteria 6364494
188 Ga0495661_0056596
189 SwRhRL2b_contig_2739513
190 JGI24737J22298_10000071
191 JGI24737J22298_10004777
192 JGI24735J21928_10000013
193 JGI25162J39368_1000107
194 JGI25162J39368_1000615
195 JGI25164J39214_1001377
196 JGI25165J46597_1000157
197 rootH2_10005336
198 rootH2_10025125
199 rootH2_10071606
200 rootH1_10027348
201 rootH1_10076895
202 Ga0065714_10002412
203 Ga0065714_10002827
204 Ga0065714_10003725
205 Ga0065714_10065215
206 Ga0065714_10074264
207 Ga0065704_10071014
208 Ga0070658_10000014
209 Ga0070676_10000729
210 Ga0070673_100001650
211 Ga0070662_100000014
212 Ga0070681_10003892
213 Ga0068867_100001403
214 Ga0068853_100003643
215 Ga0068853_100015859
216 Ga0070672_100016971
217 Ga0070665_100000032
218 Ga0068855_100000049
219 Ga0068855_100000458
220 Ga0068855_100097119
221 Ga0068857_100067266
222 Ga0068856_100000191
223 Ga0068856_100003417
224 Ga0068856_100086532
225 Ga0068852_100045319
226 Ga0075366_10002239
227 Ga0075366_10010332
228 Ga0097621_100003150
229 Ga0068871_100000306
230 Ga0068865_100000271
231 Ga0105240_10000010
232 Ga0105240_10073975
233 Ga0105241_10037743
234 Ga0105237_10000578
235 Ga0105237_10000844
236 Ga0105237_10001048
237 Ga0105237_10001711
238 Ga0105237_10008085
239 Ga0105237_10008956
240 Ga0105237_10047397
241 Ga0105238_10044762
242 Ga0105239_10000007
243 Ga0105239_10000212
244 Ga0105239_10000352
245 Ga0105239_10005942
246 Ga0105239_10011856
247 Ga0105239_10060019
248 Ga0105239_10115215
249 Ga0157373_10000031
250 Ga0157373_10000881
251 Ga0157373_10007395
252 Ga0157371_10000689
253 Ga0157371_10001485
254 Ga0157371_10002152
255 Ga0157371_10013541
256 Ga0157371_10044143
257 Ga0157370_10000197
258 Ga0157370_10008599
259 Ga0157370_10074367
260 Ga0157369_10114921
261 Ga0157374_10001060
262 Ga0157374_10002738
263 Ga0163162_10011830
264 Ga0163162_10024006
265 Ga0157372_10000173
266 Ga0157372_10002719
267 Ga0157372_10009261
268 Ga0157372_10010028
269 Ga0157375_10039278
270 Ga0157375_10050446
271 Ga0182008_10000024
272 Ga0182008_10001883
273 Ga0182006_1000373
274 Ga0163161_10001209
275 Ga0207427_100025
276 Ga0209437_100010
277 Ga0209437_100148
278 Ga0209233_1000017
279 Ga0209233_1001980
280 Ga0209455_1002984
281 Ga0207647_10000366
282 Ga0207647_10000680
283 Ga0207645_10000591
284 Ga0207705_10000107
285 Ga0207707_10003005
286 Ga0207695_10000019
287 Ga0207695_10036696
288 Ga0207671_10002404
289 Ga0207671_10002702
290 Ga0207671_10003730
291 Ga0207671_10014749
292 Ga0207671_10033798
293 Ga0207694_10102666
294 Ga0207706_10000057
295 Ga0207704_10001974
296 Ga0207661_10004099
297 Ga0207667_10000015
298 Ga0207667_10002856
299 Ga0207651_10001477
300 Ga0207639_10103403
301 Ga0207702_10003768
302 Ga0207702_10007581
303 Ga0207702_10064488
304 Ga0207648_10005635
305 Ga0207674_10066526
306 Ga0207698_10050866
307 Ga0268266_10000030
308 Ga0307517_10001373
309 Ga0307515_10001837
310 Ga0307408_100000919
311 Ga0307408_100001075
312 Ga0307408_100006564
313 Ga0307412_10000030
314 Ga0307414_10010616
315 Ga0307414_10063964
316 Ga0307507_10000032
317 Ga0395899_0000002
318 Ga0395900_0000284
319 Ga0395900_0039515
320 Ga0395898_0192070
321 Ga0395905_0002359
322 Ga0395901_0077638
323 Ga0395901_0155001
324 Ga0439448_0001170
325 Ga0495651_0037266
326 Ga0495650_0000162
327 Ga0495585_0000153
328 Ga0495585_0000240
329 Ga0495606_0000033
330 Ga0495606_0030822
331 Ga0495606_0036119
332 Ga0495610_0013903
333 Ga0495616_0013970
334 Ga0495616_0021699
335 Ga0495644_0014739
336 Ga0495609_0006455
337 Ga0495633_0011234
338 Ga0495668_0000009
339 Ga0495625_0000131
340 Ga0495625_0000951
341 Ga0495625_0014454
342 Ga0495625_0040168
343 Ga0495625_0074161
344 Ga0495661_0000134
345 Ga0495661_0003857
346 Ga0495649_0000009
347 Ga0495683_0023267
348 Ga0495687_003112
349 Ga0495686_0000843
350 Ga0495686_0039567
351 Ga0496122_0003056
352 Ga0496123_0018184
353 Ga0495678_009913
354 Ga0501223_000668
355 nmdc:mga0k408_320_c1
356 nmdc:mga0k408_3699_c1
357 Ga0500651_0000462
358 Ga0500608_004337
359 Ga0500618_000029
360 Ga0500622_0017031
361 Ga0500624_000118
362 2599480420
363 2738755429
364 2738763515
365 2739303262
366 2852626773
367 2852629373
368 2884933998
369 2919190285
370 2919438276
371 2928083339
372 2928151399
373 2932087318
374 2939668566

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01551

Peptidase_M23

Peptidase family M23

99

168

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qpb-assembly1.cif.gz_A catalytic domain of the antimicrobial peptidase lysostaphin from staphylococcus simulans crystallized in the absence of phosphate 0.818 41 182
3slu-assembly1.cif.gz_A crystal structure of nmb0315 0.8027 33 187
6smk-assembly1.cif.gz_A crystal structure of catalytic domain a109h mutant of prophage-encoded m23 protein enpa from enterococcus faecalis. 0.7946 36 184
2gu1-assembly1.cif.gz_A crystal structure of a zinc containing peptidase from vibrio cholerae 0.7844 33 187
7qrl-assembly2.cif.gz_B lytm domain of dipm, a coordinator of a complex net of autolysins in caulobacter crescentus 0.7725 12 181
ID Description Score Start End Superfamily
af_Q2FWU3_1169_1290_2.70.70.10 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8833 57 180 2.70.70.10
4zybC00 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8239 41 180 2.70.70.10
3sluA03 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8229 37 185 2.70.70.10
4qpbA00 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.818 41 182 2.70.70.10
af_P0AFS9_286_413_2.70.70.10 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8051 35 185 2.70.70.10
ID Description Score Start End GO Terms
AF-A0A4Q3T5W2-F1-model_v4 deleted 0.9902 414 573
AF-A0A519VR99-F1-model_v4 M23 family metallopeptidase 0.9872 100 573
AF-R9GW06-F1-model_v4 Peptidase M23 domain-containing protein 0.9852 37 573 GO:0004222
AF-A0A519VR99-F1-model_v4 M23 family metallopeptidase 0.9851 100 573
AF-A0A1W9STL0-F1-model_v4 Peptidase M23 domain-containing protein 0.9843 74 158 GO:0004222

Map