F288338

General Info

Members Datasets Scaffolds Average Seq Length
187 145 374 578

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0112426|Ga0501034_0112426_404_2404
Length 629
Sequence MAHLLGAEALHLEYPTKVVFDSVSLGLSDGDRIGVVGRNGDGKSTLLRLLAGRLEPDAGRVTRRGGIRLGMLDQADEFGRGRTVHEAVIGDVDEHVWAGDVRIRDIIAGLLGGIPWEARVDELSGGQRRRVALAALLIGDWEVLLLDEPTNHLDVEAVAWLARHLKTRWLQGSGALVTVTHDRWFLDELSTATWEVHDRMVEPFEGGYAAYVLQRVERDRMAAASEAKRQNLLRKELAWLRRGAPARTSKPKFRIDAANALIENEPPVRDSVSLAQLAMQRLGKDVVDLENVSVAFEGRVGSLRDDRLRRSPQGAGPAPLPEEGGARLEGNTPVLRDVTWRIAPGERTGILGVNGVGKSTLLGLVAGTVAPTSGRVKRGKTIRIAQLTQQLDELADVWDDRVADVLARQRTSYLAGGKELTPGQLLERLGFRSAQLSTPVRDLSGGQKRRLQILLILLSEPNVLILDEPTNDLDTDMLAAIEDLLDSFAGTLLVVSHDRYLLERVTDQQYAILPGPDGAGRMRHLPRGVDEYLELRARARSEARGLDTRPAARDLRGADLRTAQKELAAAERRLAKLGDGIREMHERMAAHDQSDYVGLGALAAELAGIEAERDELETRWLALADVLGE

Samples

Sample ID Description Type Environment
1 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
15 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
16 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
17 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
18 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
28 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
29 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
30 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
31 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
32 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
35 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
38 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
41 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
42 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
43 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
44 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
45 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
46 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
47 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
48 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
52 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
53 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
54 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
57 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
58 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
59 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
62 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
63 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
64 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
65 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
66 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
67 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
68 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
69 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
70 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
71 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
72 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
73 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
74 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
75 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
76 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
77 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
78 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
79 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
80 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
81 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
82 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
83 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
98 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
99 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
100 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
101 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
102 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
104 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
105 2643221553 Microbacterium sp. Root553 Isolate Unclassified
106 2643221566 Microbacterium sp. Root166 Isolate Unclassified
107 2643221575 Microbacterium sp. Root61 Isolate Unclassified
108 2643221597 Microbacterium sp. Root180 Isolate Unclassified
109 2643221616 Leifsonia sp. Root227 Isolate Unclassified
110 2643221630 Microbacterium sp. Root322 Isolate Unclassified
111 2643221679 Angustibacter sp. Root456 Isolate Unclassified
112 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
113 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
114 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
115 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
116 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
117 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
118 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
119 2773857759 Microbacterium sp. 1294 Isolate Unclassified
120 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
121 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
122 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
123 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
124 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
125 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
126 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
127 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
128 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
129 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
130 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
131 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
132 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
133 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
134 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
135 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
136 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
137 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
138 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
139 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
140 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
141 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
142 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
143 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
144 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
145 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 77.01
Metatranscriptomes 0.53
Isolates 22.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.02
Nodule 1.07
Rhizoplane 10.7
Rhizosphere 51.87
Stem 0
Stem Tuber 0.53
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501034_0112426 3300049571 Bacteria 2713
2 JGI25154J39366_1002442 3300002738 Bacteria 4812
3 Ga0006562J51391_1049571 3300003578 Bacteria 14740
4 Ga0055540_1000211 3300003792 Bacteria 55318
5 Ga0055540_1002075 3300003792 Bacteria 11027
6 Ga0070658_10000034 3300005327 Bacteria 146880
7 Ga0070680_100102266 3300005336 Bacteria 2379
8 Ga0070667_100002728 3300005367 Bacteria 15284
9 Ga0070714_100004302 3300005435 Bacteria 10732
10 Ga0070681_10047758 3300005458 Bacteria 4279
11 Ga0070684_100026813 3300005535 Bacteria 4857
12 Ga0075364_10008495 3300006051 Bacteria 6144
13 Ga0075369_10001816 3300006186 Bacteria 7442
14 Ga0105243_10004048 3300009148 Bacteria 11677
15 Ga0157371_10013807 3300013102 Bacteria 6119
16 Ga0157370_10042287 3300013104 Bacteria 4392
17 Ga0157372_10074924 3300013307 Bacteria 3817
18 Ga0209646_1000224 3300025246 Bacteria 60259
19 Ga0209051_1000011 3300025303 Bacteria 610828
20 Ga0209051_1002312 3300025303 Bacteria 13876
21 Ga0207705_10000001 3300025909 Bacteria 2061880
22 Ga0207664_10018401 3300025929 Bacteria 5142
23 Ga0207709_10007021 3300025935 Bacteria 6296
24 Ga0207665_10097783 3300025939 Bacteria 2044
25 Ga0207658_10012005 3300025986 Bacteria 5909
26 Ga0207678_10036720 3300026067 Bacteria 4265
27 Ga0207702_10094406 3300026078 Bacteria 2626
28 Ga0207674_10049340 3300026116 Bacteria 4305
29 Ga0265337_1000015 3300028556 Bacteria 80871
30 Ga0265326_10000453 3300028558 Bacteria 16127
31 Ga0265319_1001068 3300028563 Bacteria 17089
32 Ga0265334_10000278 3300028573 Bacteria 28820
33 Ga0265334_10001332 3300028573 Bacteria 11920
34 Ga0265323_10005132 3300028653 Bacteria 5579
35 Ga0265336_10000833 3300028666 Bacteria 16072
36 Ga0265338_10000767 3300028800 Bacteria 54778
37 Ga0265338_10037090 3300028800 Bacteria 4647
38 Ga0265324_10001791 3300029957 Bacteria 11726
39 Ga0265332_10002335 3300031238 Bacteria 9677
40 Ga0265320_10000498 3300031240 Bacteria 30619
41 Ga0265325_10001788 3300031241 Bacteria 14895
42 Ga0265340_10001538 3300031247 Bacteria 13244
43 Ga0265327_10001529 3300031251 Bacteria 28541
44 Ga0265316_10017627 3300031344 Bacteria 6162
45 Ga0265313_10002930 3300031595 Bacteria 14252
46 Ga0307514_10001502 3300031649 Bacteria 28063
47 Ga0265314_10009720 3300031711 Bacteria 8090
48 Ga0265342_10001186 3300031712 Bacteria 24747
49 Ga0307406_10000065 3300031901 Bacteria 58903
50 Ga0307406_10000555 3300031901 Bacteria 21462
51 Ga0307412_10079296 3300031911 Bacteria 2265
52 Ga0373925_0000006 3300037068 Bacteria 278942
53 Ga0395899_0069173 3300037312 Bacteria 2586
54 Ga0395898_0000015 3300037466 Bacteria 439819
55 Ga0395901_0130058 3300038443 Bacteria 2645
56 Ga0439461_0001029 3300041410 Bacteria 4196
57 Ga0439466_0000522 3300041411 Bacteria 14489
58 Ga0439431_0001186 3300041997 Bacteria 5701
59 Ga0439434_0005026 3300042435 Bacteria 3866
60 Ga0466966_0067910 3300044684 Bacteria 2238
61 Ga0466968_0030234 3300044735 Bacteria 2243
62 Ga0466970_0065999 3300044765 Bacteria 1942
63 Ga0466957_0008498 3300044842 Bacteria 5842
64 Ga0466960_0001311 3300044901 Bacteria 9013
65 Ga0466960_0037560 3300044901 Bacteria 2272
66 Ga0466967_0026087 3300045976 Bacteria 4833
67 Ga0495627_000352 3300046453 Bacteria 43219
68 Ga0495645_0152302 3300046543 Bacteria 1605
69 Ga0496100_0000335 3300048903 Bacteria 22955
70 Ga0496101_0002418 3300048904 Bacteria 11467
71 Ga0496102_0004464 3300048905 Bacteria 11805
72 Ga0496103_0006425 3300048906 Bacteria 7020
73 Ga0496103_0008926 3300048906 Bacteria 5943
74 Ga0496106_0000199 3300048909 Bacteria 42320
75 Ga0496107_0006633 3300048910 Bacteria 7968
76 Ga0496107_0017723 3300048910 Bacteria 5011
77 Ga0496108_0004467 3300048911 Bacteria 11258
78 Ga0496109_0003614 3300048912 Bacteria 12930
79 Ga0496109_0018563 3300048912 Bacteria 6110
80 Ga0496109_0018785 3300048912 Bacteria 6080
81 Ga0496110_0004869 3300048913 Bacteria 10475
82 Ga0496113_0010501 3300048916 Bacteria 6123
83 Ga0496113_0029347 3300048916 Bacteria 3970
84 Ga0496114_0004141 3300048917 Bacteria 11219
85 Ga0496114_0008563 3300048917 Bacteria 8111
86 Ga0496114_0092660 3300048917 Bacteria 2567
87 Ga0496115_0017265 3300048918 Bacteria 5512
88 Ga0496115_0115526 3300048918 Bacteria 2207
89 Ga0496117_0000255 3300048920 Bacteria 100069
90 Ga0496117_0004434 3300048920 Bacteria 15487
91 Ga0496117_0025746 3300048920 Bacteria 4616
92 Ga0496118_0000229 3300048921 Bacteria 98023
93 Ga0496119_0009218 3300048922 Bacteria 8515
94 Ga0496120_0031626 3300048923 Bacteria 3202
95 Ga0496121_0000433 3300048924 Bacteria 82438
96 Ga0496122_0001735 3300048925 Bacteria 33820
97 Ga0496122_0007865 3300048925 Bacteria 11712
98 Ga0496122_0028354 3300048925 Bacteria 4754
99 Ga0496123_0000964 3300048926 Bacteria 44426
100 Ga0496123_0011387 3300048926 Bacteria 7714
101 Ga0496123_0019804 3300048926 Bacteria 5286
102 Ga0496124_0000015 3300048927 Bacteria 460700
103 Ga0496124_0000301 3300048927 Bacteria 91222
104 Ga0496125_0000021 3300048928 Bacteria 460688
105 Ga0496125_0006877 3300048928 Bacteria 12185
106 Ga0496125_0007248 3300048928 Bacteria 11813
107 Ga0496126_0000015 3300048929 Bacteria 663212
108 Ga0496126_0008807 3300048929 Bacteria 10824
109 Ga0496126_0059583 3300048929 Bacteria 3438
110 Ga0501031_0000677 3300049568 Bacteria 20289
111 Ga0501031_0003781 3300049568 Bacteria 9741
112 Ga0501032_0003503 3300049569 Bacteria 11992
113 Ga0501033_0003369 3300049570 Bacteria 13185
114 Ga0501033_0005333 3300049570 Bacteria 10187
115 Ga0501033_0008304 3300049570 Bacteria 8043
116 Ga0501034_0011189 3300049571 Bacteria 9314
117 Ga0501034_0012777 3300049571 Bacteria 8660
118 Ga0501034_0031469 3300049571 Bacteria 5388
119 Ga0501034_0060855 3300049571 Bacteria 3793
120 Ga0501036_0002820 3300049572 Bacteria 13774
121 Ga0501037_0088132 3300049573 Bacteria 2246
122 Ga0501039_0001521 3300049575 Bacteria 17086
123 Ga0501039_0022226 3300049575 Bacteria 4869
124 Ga0501043_0010107 3300049579 Bacteria 7397
125 Ga0501043_0081888 3300049579 Bacteria 2536
126 Ga0501048_0001143 3300049582 Bacteria 19921
127 Ga0501070_0008144 3300049586 Bacteria 8867
128 Ga0501070_0009840 3300049586 Bacteria 8084
129 Ga0501071_0001866 3300049587 Bacteria 12495
130 Ga0501035_0015587 3300049822 Bacteria 7012
131 Ga0501035_0027059 3300049822 Bacteria 5243
132 Ga0501044_0007662 3300049823 Bacteria 11872
133 Ga0501044_0012956 3300049823 Bacteria 9027
134 Ga0501044_0013115 3300049823 Bacteria 8971
135 Ga0501044_0043085 3300049823 Bacteria 4690
136 nmdc:mga00v17_5810_c1 3300050491 Bacteria 6512
137 nmdc:mga00v17_8489_c1 3300050491 Bacteria 5528
138 Ga0500643_000092 3300053087 Bacteria 93617
139 Ga0500556_0000028 3300053104 Bacteria 165503
140 Ga0500559_0000052 3300053136 Bacteria 91218
141 Ga0500559_0001148 3300053136 Bacteria 15973
142 Ga0500568_0000009 3300053139 Bacteria 270298
143 Ga0500573_0000128 3300053140 Bacteria 29489
144 Ga0500573_0007596 3300053140 Bacteria 5923
145 Ga0501082_0023686 3300060353 Bacteria 5294
146 2643734989 2643221542 Bacteria 3563959
147 2643786659 2643221553 Bacteria 3544260
148 2643849175 2643221566 Bacteria 3460379
149 2643886069 2643221575 Bacteria 4022601
150 2643995391 2643221597 Bacteria 3347721
151 2644096799 2643221616 Bacteria 4066575
152 2644173149 2643221630 Bacteria 3601215
153 2644446821 2643221679 Bacteria 3839507
154 2644636691 2643221715 Bacteria 6671032
155 2644681337 2643221724 Bacteria 3593515
156 2730230230 2728369380 Bacteria 3620317
157 2738664980 2738541264 Bacteria 5935393
158 2739144114 2738541356 Bacteria 5935017
159 2747951688 2747842429 Bacteria 3914386
160 2753300856 2751185788 Bacteria 4541048
161 2774384011 2773857759 Bacteria 2963774
162 2808630695 2808606306 Bacteria 3608896
163 2808886093 2808606368 Bacteria 3174172
164 2842137809 2842134933 Bacteria 5847019
165 2852644749 2852643534 Bacteria 3013378
166 2852649781 2852646457 Bacteria 3408613
167 2852665690 2852663356 Bacteria 4090475
168 2852678858 2852677369 Bacteria 3768884
169 2857724947 2857723135 Bacteria 4217853
170 2857734139 2857733635 Bacteria 3532004
171 2870622606 2870622029 Bacteria 3643329
172 2884765989 2884763398 Bacteria 4091164
173 2887447097 2887443736 Bacteria 4426037
174 2902811845 2902810491 Bacteria 6794147
175 2906803265 2906799679 Bacteria 4031749
176 2928106613 2928104781 Bacteria 3877447
177 2929215657 2929212328 Bacteria 7708288
178 2939659024 2939657138 Bacteria 3740283
179 2939663004 2939660829 Bacteria 3784848
180 2946044897 2946041624 Bacteria 4191385
181 2946084493 2946080515 Bacteria 4310960
182 2964328813 2964326757 Bacteria 3290868
183 2974326890 2974324384 Bacteria 3750535
184 2977254462 2977251589 Bacteria 2952848
185 2977267221 2977264416 Bacteria 3750737
186 8004185765 8004182704 Bacteria 3391155
187 8055158808 8055157932 Bacteria 6429399
188 Ga0501034_0112426
189 JGI25154J39366_1002442
190 Ga0006562J51391_1049571
191 Ga0055540_1000211
192 Ga0055540_1002075
193 Ga0070658_10000034
194 Ga0070680_100102266
195 Ga0070667_100002728
196 Ga0070714_100004302
197 Ga0070681_10047758
198 Ga0070684_100026813
199 Ga0075364_10008495
200 Ga0075369_10001816
201 Ga0105243_10004048
202 Ga0157371_10013807
203 Ga0157370_10042287
204 Ga0157372_10074924
205 Ga0209646_1000224
206 Ga0209051_1000011
207 Ga0209051_1002312
208 Ga0207705_10000001
209 Ga0207664_10018401
210 Ga0207709_10007021
211 Ga0207665_10097783
212 Ga0207658_10012005
213 Ga0207678_10036720
214 Ga0207702_10094406
215 Ga0207674_10049340
216 Ga0265337_1000015
217 Ga0265326_10000453
218 Ga0265319_1001068
219 Ga0265334_10000278
220 Ga0265334_10001332
221 Ga0265323_10005132
222 Ga0265336_10000833
223 Ga0265338_10000767
224 Ga0265338_10037090
225 Ga0265324_10001791
226 Ga0265332_10002335
227 Ga0265320_10000498
228 Ga0265325_10001788
229 Ga0265340_10001538
230 Ga0265327_10001529
231 Ga0265316_10017627
232 Ga0265313_10002930
233 Ga0307514_10001502
234 Ga0265314_10009720
235 Ga0265342_10001186
236 Ga0307406_10000065
237 Ga0307406_10000555
238 Ga0307412_10079296
239 Ga0373925_0000006
240 Ga0395899_0069173
241 Ga0395898_0000015
242 Ga0395901_0130058
243 Ga0439461_0001029
244 Ga0439466_0000522
245 Ga0439431_0001186
246 Ga0439434_0005026
247 Ga0466966_0067910
248 Ga0466968_0030234
249 Ga0466970_0065999
250 Ga0466957_0008498
251 Ga0466960_0001311
252 Ga0466960_0037560
253 Ga0466967_0026087
254 Ga0495627_000352
255 Ga0495645_0152302
256 Ga0496100_0000335
257 Ga0496101_0002418
258 Ga0496102_0004464
259 Ga0496103_0006425
260 Ga0496103_0008926
261 Ga0496106_0000199
262 Ga0496107_0006633
263 Ga0496107_0017723
264 Ga0496108_0004467
265 Ga0496109_0003614
266 Ga0496109_0018563
267 Ga0496109_0018785
268 Ga0496110_0004869
269 Ga0496113_0010501
270 Ga0496113_0029347
271 Ga0496114_0004141
272 Ga0496114_0008563
273 Ga0496114_0092660
274 Ga0496115_0017265
275 Ga0496115_0115526
276 Ga0496117_0000255
277 Ga0496117_0004434
278 Ga0496117_0025746
279 Ga0496118_0000229
280 Ga0496119_0009218
281 Ga0496120_0031626
282 Ga0496121_0000433
283 Ga0496122_0001735
284 Ga0496122_0007865
285 Ga0496122_0028354
286 Ga0496123_0000964
287 Ga0496123_0011387
288 Ga0496123_0019804
289 Ga0496124_0000015
290 Ga0496124_0000301
291 Ga0496125_0000021
292 Ga0496125_0006877
293 Ga0496125_0007248
294 Ga0496126_0000015
295 Ga0496126_0008807
296 Ga0496126_0059583
297 Ga0501031_0000677
298 Ga0501031_0003781
299 Ga0501032_0003503
300 Ga0501033_0003369
301 Ga0501033_0005333
302 Ga0501033_0008304
303 Ga0501034_0011189
304 Ga0501034_0012777
305 Ga0501034_0031469
306 Ga0501034_0060855
307 Ga0501036_0002820
308 Ga0501037_0088132
309 Ga0501039_0001521
310 Ga0501039_0022226
311 Ga0501043_0010107
312 Ga0501043_0081888
313 Ga0501048_0001143
314 Ga0501070_0008144
315 Ga0501070_0009840
316 Ga0501071_0001866
317 Ga0501035_0015587
318 Ga0501035_0027059
319 Ga0501044_0007662
320 Ga0501044_0012956
321 Ga0501044_0013115
322 Ga0501044_0043085
323 nmdc:mga00v17_5810_c1
324 nmdc:mga00v17_8489_c1
325 Ga0500643_000092
326 Ga0500556_0000028
327 Ga0500559_0000052
328 Ga0500559_0001148
329 Ga0500568_0000009
330 Ga0500573_0000128
331 Ga0500573_0007596
332 Ga0501082_0023686
333 2643734989
334 2643786659
335 2643849175
336 2643886069
337 2643995391
338 2644096799
339 2644173149
340 2644446821
341 2644636691
342 2644681337
343 2730230230
344 2738664980
345 2739144114
346 2747951688
347 2753300856
348 2774384011
349 2808630695
350 2808886093
351 2842137809
352 2852644749
353 2852649781
354 2852665690
355 2852678858
356 2857724947
357 2857734139
358 2870622606
359 2884765989
360 2887447097
361 2902811845
362 2906803265
363 2928106613
364 2929215657
365 2939659024
366 2939663004
367 2946044897
368 2946084493
369 2964328813
370 2974326890
371 2977254462
372 2977267221
373 8004185765
374 8055158808

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16326

ABC_tran_CTD

ABC transporter C-terminal domain

560

625

0.95

PF00005

ABC_tran

ABC transporter

20

151

0.92

PF00005

ABC_tran

ABC transporter

335

471

0.82

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

368

503

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dkm-assembly1.cif.gz_B dhd131 0.9412 539 606
6b87-assembly3.cif.gz_C crystal structure of transmembrane protein tmhc2_e 0.9141 539 606
5n6x-assembly1.cif.gz_A crystal structure of the legionella effector wipa 0.9102 542 605
7tch-assembly1.cif.gz_C bceab e169q variant atp-bound conformation 0.8689 4 205
8cea-assembly1.cif.gz_a cytochrome c maturation complex ccmabcd, e154q 0.861 2 181
ID Description Score Start End Superfamily
af_O53916_1_235_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9424 1 234 3.40.50.300
af_O53916_1_235_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9345 1 234 3.40.50.300
2x0lA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;ATP synthase, gamma subunit, helix hairpin domain 0.8971 539 606 1.10.287.80
af_Q4PIV7_1_183_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.8941 539 606 1.20.140.150
af_F1QFY0_24_297_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.8888 539 606 1.20.1270.60
ID Description Score Start End GO Terms
AF-A0A7V9NSQ8-F1-model_v4 ABC-F family ATP-binding cassette domain-containing protein 0.924 2 193 GO:0005524
GO:0016887
AF-A0A7V9NSQ8-F1-model_v4 ABC-F family ATP-binding cassette domain-containing protein 0.9142 2 193 GO:0005524
GO:0016887
AF-A0A1H7XCB2-F1-model_v4 ABC-type multidrug transport system, ATPase component 0.8996 3 205 GO:0005524
GO:0016887
AF-A0A271JDA0-F1-model_v4 ABC transporter ATP-binding protein 0.8935 2 206 GO:0005524
GO:0005886
GO:0016887
GO:0140359
AF-A0A3D3F6W9-F1-model_v4 Glycosyl transferase family 2 0.8876 5 223 GO:0005524
GO:0016740
GO:0016887

Map