F288973
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 188 | 149 | 180 | 741 |
Family's Representative Sequence
| Representative Sequence | 3300005467|Ga0070706_100000546|Ga0070706_1000005466 |
| Length | 769 |
| Sequence | MPAGDNGGSFREDGRMGRGCWSFTRMLALVGAAACALLAACNNSPYVAGAASKNVLFNSFDERSPRYLDPTASYLNPETPYTFSAYEPLYGYHYLKRPYEVVPKAAAAVVKPYYLAGNGQRLPDDANPAQIAESVYDIPIKKGVMYAPHPAFAKDDRGEYLYHHLTREQLGHKRSPWDFDKQGTRELVADDFVYAFKRHATTRIEAPIYAVFADYIIGLKDYGKLIAAEDKKLLAGLSEASPDKPFLDFRKWPLSGVTALDKYTVRIRLRGKYPQWKYWLTLTFASPLPWEADAFYSQPGMADAGLSLIRWPVGTGPFMLTEYEQDRKLVMKRNPNFHGETYPCEGSPGDKEAGLLDDCGKPLPFIDGFESIIIKERVPRKEMFKQGYLDVPELERPEWGVEFASDAEDSDDVKRRFNERGFKFPQATDINNWYLGFNWLDPVVGKGDTPEQQVKNRKLRQALSIAIDWEEGYQRIFRSRGGDAAHGPIPPGVFGSRDGNTPEGYNPVTHRLVNGRVERRPIEDAKKLLAEAGYPDGRDAKNGRPLVLNYDYQRTLTPELKAEVDWMVKQFAKLNIQLEIRATDFNQHQEKMLKGKEQIFWAGWLGDYPDAENFLFQLYGPNAKAVTQGENSANYRNPEYDKLFEKMQTLDDGPERQQVMDQMLAIVREDAPWAWGYWAYVGLAFQSWVHNGKPSIVIRDQTWFYRIDPKLRVAKQAEWNEPTWWPMGLLALAALALAWIGRRGYRARQQATAKAGVPTTVAPSAAAGG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2585428057 | Methylibium sp. YR605 | Isolate | Rhizosphere |
| 2 | 2585428058 | Methylibium sp. CF468 | Isolate | Rhizosphere |
| 3 | 2588253510 | Rhizobacter sp. OV335 | Isolate | Rhizosphere |
| 4 | 2643221592 | Rhizobacter sp. Root16D2 | Isolate | Unclassified |
| 5 | 2643221625 | Rhizobacter sp. Root29 | Isolate | Unclassified |
| 6 | 2643221644 | Rhizobacter sp. Root1221 | Isolate | Unclassified |
| 7 | 2643221648 | Rhizobacter sp. Root1238 | Isolate | Unclassified |
| 8 | 2643221654 | Rhizobacter sp. Root404 | Isolate | Unclassified |
| 9 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 10 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 11 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 12 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 13 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 14 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 15 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 16 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 17 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 18 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 19 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 20 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 21 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 22 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 23 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 24 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 25 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 28 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 32 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 33 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 34 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 35 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 36 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 39 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 40 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 41 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 42 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 43 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 44 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 45 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 46 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 47 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 48 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 49 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 63 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 64 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 65 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 67 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 68 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 69 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 71 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 72 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 75 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 76 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 77 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 95 | 3300027695 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 98 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 99 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 100 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 101 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 102 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 103 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 104 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 105 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 106 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 107 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 108 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 109 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 110 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 111 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 112 | 3300042121 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 | Metagenome | Rhizosphere |
| 113 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 114 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 115 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 116 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 117 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 118 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 119 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 130 | 3300049682 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought | Metagenome | Rhizosphere |
| 131 | 3300049759 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought | Metagenome | Rhizosphere |
| 132 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 133 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 134 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 135 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 136 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 137 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 138 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 139 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 140 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 141 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 142 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 143 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 144 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 145 | 3300053154 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere | Metagenome | Endosphere |
| 146 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 147 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 148 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 149 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.74 |
| Metatranscriptomes | 0 |
| Isolates | 4.26 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 32.98 |
| Nodule | 1.06 |
| Rhizoplane | 0.53 |
| Rhizosphere | 46.28 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 19.15 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25156J39149_1000114 | 3300002705 | Bacteria | 57756 |
| 2 | JGI25154J39366_1000675 | 3300002738 | Bacteria | 15804 |
| 3 | JGI25157J39369_1000015 | 3300002741 | Bacteria | 194042 |
| 4 | rootH1_10042432 | 3300003316 | Bacteria | 3341 |
| 5 | rootL2_10041891 | 3300003322 | Bacteria | 10322 |
| 6 | rootH1_10020494 | 3300003323 | Bacteria | 4396 |
| 7 | Ga0055539_1001223 | 3300003752 | Bacteria | 5175 |
| 8 | Ga0055533_1000010 | 3300003756 | Bacteria | 491196 |
| 9 | Ga0055525_1001110 | 3300003759 | Bacteria | 6631 |
| 10 | Ga0055535_1000272 | 3300003761 | Bacteria | 54297 |
| 11 | Ga0055529_1000303 | 3300003763 | Bacteria | 56663 |
| 12 | Ga0055526_1001195 | 3300003771 | Bacteria | 18771 |
| 13 | Ga0055526_1004055 | 3300003771 | Bacteria | 8992 |
| 14 | Ga0055524_1000203 | 3300003775 | Bacteria | 64635 |
| 15 | Ga0055530_10000258 | 3300003791 | Bacteria | 47803 |
| 16 | Ga0055540_1000023 | 3300003792 | Bacteria | 201131 |
| 17 | Ga0065165_1005244 | 3300005262 | Bacteria | 7421 |
| 18 | Ga0070676_10006116 | 3300005328 | Bacteria | 6428 |
| 19 | Ga0070677_10009670 | 3300005333 | Bacteria | 3276 |
| 20 | Ga0068868_100032698 | 3300005338 | Bacteria | 4004 |
| 21 | Ga0070675_100022681 | 3300005354 | Bacteria | 5016 |
| 22 | Ga0070659_100004176 | 3300005366 | Bacteria | 10298 |
| 23 | Ga0070667_100000677 | 3300005367 | Bacteria | 33094 |
| 24 | Ga0068867_100004063 | 3300005459 | Bacteria | 10300 |
| 25 | Ga0070706_100000546 | 3300005467 | Bacteria | 43742 |
| 26 | Ga0070707_100015876 | 3300005468 | Bacteria | 7068 |
| 27 | Ga0070698_100049586 | 3300005471 | Bacteria | 4284 |
| 28 | Ga0068853_100092734 | 3300005539 | Bacteria | 2657 |
| 29 | Ga0070672_100017771 | 3300005543 | Bacteria | 5125 |
| 30 | Ga0070664_100050448 | 3300005564 | Bacteria | 3522 |
| 31 | Ga0068857_100002227 | 3300005577 | Bacteria | 15795 |
| 32 | Ga0068857_100017264 | 3300005577 | Bacteria | 6322 |
| 33 | Ga0068854_100033562 | 3300005578 | Bacteria | 3578 |
| 34 | Ga0068856_100001705 | 3300005614 | Bacteria | 22970 |
| 35 | Ga0068861_100001416 | 3300005719 | Bacteria | 15100 |
| 36 | Ga0068860_100000903 | 3300005843 | Bacteria | 32899 |
| 37 | Ga0075363_100002175 | 3300006048 | Bacteria | 7896 |
| 38 | Ga0075369_10005295 | 3300006186 | Bacteria | 4810 |
| 39 | Ga0075366_10024872 | 3300006195 | Bacteria | 3493 |
| 40 | Ga0075370_10003114 | 3300006353 | Bacteria | 7829 |
| 41 | Ga0075370_10005217 | 3300006353 | Bacteria | 6426 |
| 42 | Ga0075370_10022857 | 3300006353 | Bacteria | 3439 |
| 43 | Ga0068865_100000416 | 3300006881 | Bacteria | 23784 |
| 44 | Ga0079104_1000273 | 3300006946 | Bacteria | 67267 |
| 45 | Ga0105240_10074411 | 3300009093 | Bacteria | 4193 |
| 46 | Ga0105243_10047930 | 3300009148 | Bacteria | 3366 |
| 47 | Ga0105241_10085635 | 3300009174 | Bacteria | 2477 |
| 48 | Ga0105237_10019912 | 3300009545 | Bacteria | 6927 |
| 49 | Ga0105239_10007802 | 3300010375 | Bacteria | 12244 |
| 50 | Ga0105239_10010335 | 3300010375 | Bacteria | 10451 |
| 51 | Ga0157374_10030002 | 3300013296 | Bacteria | 4934 |
| 52 | Ga0157378_10002502 | 3300013297 | Bacteria | 16357 |
| 53 | Ga0157380_10079127 | 3300014326 | Bacteria | 2684 |
| 54 | Ga0157379_10008791 | 3300014968 | Bacteria | 8811 |
| 55 | Ga0157379_10052014 | 3300014968 | Bacteria | 3658 |
| 56 | Ga0209674_100003 | 3300025226 | Bacteria | 2196646 |
| 57 | Ga0209563_100010 | 3300025230 | Bacteria | 1337457 |
| 58 | Ga0207427_100468 | 3300025231 | Bacteria | 22112 |
| 59 | Ga0209258_100163 | 3300025242 | Bacteria | 149677 |
| 60 | Ga0207425_1000810 | 3300025245 | Bacteria | 15694 |
| 61 | Ga0209646_1000226 | 3300025246 | Bacteria | 60008 |
| 62 | Ga0209026_1000021 | 3300025250 | Bacteria | 375165 |
| 63 | Ga0209677_100093 | 3300025253 | Bacteria | 101695 |
| 64 | Ga0209677_100699 | 3300025253 | Bacteria | 17140 |
| 65 | Ga0209759_1000025 | 3300025256 | Bacteria | 317082 |
| 66 | Ga0209759_1001380 | 3300025256 | Bacteria | 13987 |
| 67 | Ga0209759_1003891 | 3300025256 | Bacteria | 5764 |
| 68 | Ga0209759_1005056 | 3300025256 | Bacteria | 4730 |
| 69 | Ga0209129_1000025 | 3300025258 | Bacteria | 413639 |
| 70 | Ga0209565_1004885 | 3300025263 | Bacteria | 4002 |
| 71 | Ga0209455_1000059 | 3300025272 | Bacteria | 339995 |
| 72 | Ga0209673_1003363 | 3300025273 | Bacteria | 9526 |
| 73 | Ga0209564_1000039 | 3300025295 | Bacteria | 413604 |
| 74 | Ga0209564_1000051 | 3300025295 | Bacteria | 357748 |
| 75 | Ga0209758_1000163 | 3300025297 | Bacteria | 151988 |
| 76 | Ga0209758_1000287 | 3300025297 | Bacteria | 99234 |
| 77 | Ga0209050_1000325 | 3300025298 | Bacteria | 95686 |
| 78 | Ga0209050_1000748 | 3300025298 | Bacteria | 46763 |
| 79 | Ga0209256_1000024 | 3300025299 | Bacteria | 448909 |
| 80 | Ga0209051_1000079 | 3300025303 | Bacteria | 201183 |
| 81 | Ga0209257_1000183 | 3300025304 | Bacteria | 156618 |
| 82 | Ga0209257_1015417 | 3300025304 | Bacteria | 3181 |
| 83 | Ga0207642_10008367 | 3300025899 | Bacteria | 3545 |
| 84 | Ga0207645_10006109 | 3300025907 | Bacteria | 8657 |
| 85 | Ga0207695_10031302 | 3300025913 | Bacteria | 5837 |
| 86 | Ga0207695_10117459 | 3300025913 | Bacteria | 2632 |
| 87 | Ga0207671_10008158 | 3300025914 | Bacteria | 8932 |
| 88 | Ga0207657_10056533 | 3300025919 | Bacteria | 3385 |
| 89 | Ga0207691_10010922 | 3300025940 | Bacteria | 8718 |
| 90 | Ga0207689_10058192 | 3300025942 | Bacteria | 3179 |
| 91 | Ga0207679_10009035 | 3300025945 | Bacteria | 6367 |
| 92 | Ga0207667_10032549 | 3300025949 | Bacteria | 5617 |
| 93 | Ga0207667_10033087 | 3300025949 | Bacteria | 5562 |
| 94 | Ga0207651_10004013 | 3300025960 | Bacteria | 7322 |
| 95 | Ga0207658_10001186 | 3300025986 | Bacteria | 20793 |
| 96 | Ga0207703_10024295 | 3300026035 | Bacteria | 4768 |
| 97 | Ga0207639_10049934 | 3300026041 | Bacteria | 3175 |
| 98 | Ga0207702_10000777 | 3300026078 | Bacteria | 33801 |
| 99 | Ga0207648_10005793 | 3300026089 | Bacteria | 12380 |
| 100 | Ga0207648_10009947 | 3300026089 | Bacteria | 9061 |
| 101 | Ga0207674_10025753 | 3300026116 | Bacteria | 6265 |
| 102 | Ga0207674_10031589 | 3300026116 | Bacteria | 5560 |
| 103 | Ga0207675_100062505 | 3300026118 | Bacteria | 3477 |
| 104 | Ga0209281_1000416 | 3300027111 | Bacteria | 64290 |
| 105 | Ga0209966_1000207 | 3300027695 | Bacteria | 24304 |
| 106 | Ga0268264_10007683 | 3300028381 | Bacteria | 8986 |
| 107 | Ga0265336_10000051 | 3300028666 | Bacteria | 114796 |
| 108 | Ga0307517_10000052 | 3300028786 | Bacteria | 155904 |
| 109 | Ga0307515_10000006 | 3300028794 | Bacteria | 725810 |
| 110 | Ga0307515_10000645 | 3300028794 | Bacteria | 80548 |
| 111 | Ga0307515_10001163 | 3300028794 | Bacteria | 60305 |
| 112 | Ga0307515_10004839 | 3300028794 | Bacteria | 27544 |
| 113 | Ga0307515_10119164 | 3300028794 | Bacteria | 3005 |
| 114 | Ga0265324_10000292 | 3300029957 | Bacteria | 37241 |
| 115 | Ga0307513_10110669 | 3300031456 | Bacteria | 2741 |
| 116 | Ga0307509_10004093 | 3300031507 | Bacteria | 21353 |
| 117 | Ga0307509_10016763 | 3300031507 | Bacteria | 8465 |
| 118 | Ga0307509_10109103 | 3300031507 | Bacteria | 2779 |
| 119 | Ga0307508_10000047 | 3300031616 | Bacteria | 137805 |
| 120 | Ga0307508_10001110 | 3300031616 | Bacteria | 31159 |
| 121 | Ga0307508_10017519 | 3300031616 | Bacteria | 6511 |
| 122 | Ga0307514_10003965 | 3300031649 | Bacteria | 13844 |
| 123 | Ga0307514_10055370 | 3300031649 | Bacteria | 3049 |
| 124 | Ga0307516_10000138 | 3300031730 | Bacteria | 87604 |
| 125 | Ga0307516_10001369 | 3300031730 | Bacteria | 33766 |
| 126 | Ga0307510_10001123 | 3300033180 | Bacteria | 28660 |
| 127 | Ga0373937_0013714 | 3300036401 | Bacteria | 7141 |
| 128 | Ga0395898_0019349 | 3300037466 | Bacteria | 6931 |
| 129 | Ga0395905_0012986 | 3300037471 | Bacteria | 8004 |
| 130 | Ga0395901_0001733 | 3300038443 | Bacteria | 22534 |
| 131 | Ga0451853_1750824 | 3300041512 | Bacteria | 4916 |
| 132 | Ga0450919_000597 | 3300042121 | Bacteria | 4568 |
| 133 | Ga0466969_0000037 | 3300044656 | Bacteria | 75663 |
| 134 | Ga0466969_0001138 | 3300044656 | Bacteria | 14320 |
| 135 | Ga0466966_0005078 | 3300044684 | Bacteria | 8646 |
| 136 | Ga0466961_0024851 | 3300044693 | Bacteria | 3853 |
| 137 | Ga0466964_0001961 | 3300044706 | Bacteria | 7214 |
| 138 | Ga0466971_0003933 | 3300044719 | Bacteria | 6377 |
| 139 | Ga0466959_0011665 | 3300045049 | Bacteria | 6320 |
| 140 | Ga0495592_0000346 | 3300046454 | Bacteria | 37799 |
| 141 | Ga0495639_0005879 | 3300046475 | Bacteria | 5278 |
| 142 | Ga0495583_0000284 | 3300046506 | Bacteria | 81053 |
| 143 | Ga0495630_0031598 | 3300046517 | Bacteria | 3943 |
| 144 | Ga0495632_0013686 | 3300046519 | Bacteria | 4617 |
| 145 | Ga0495632_0016094 | 3300046519 | Bacteria | 4171 |
| 146 | Ga0495624_0025992 | 3300046690 | Bacteria | 3840 |
| 147 | Ga0495649_0001533 | 3300046694 | Bacteria | 17354 |
| 148 | Ga0495649_0006892 | 3300046694 | Bacteria | 7033 |
| 149 | Ga0495676_0017587 | 3300047321 | Bacteria | 6317 |
| 150 | Ga0495687_001455 | 3300047443 | Bacteria | 21714 |
| 151 | Ga0495687_002586 | 3300047443 | Bacteria | 14265 |
| 152 | Ga0495686_0005328 | 3300047472 | Bacteria | 10189 |
| 153 | Ga0496114_0024938 | 3300048917 | Bacteria | 4883 |
| 154 | Ga0501252_000233 | 3300049682 | Bacteria | 3804 |
| 155 | Ga0501262_000978 | 3300049759 | Bacteria | 3242 |
| 156 | nmdc:mga03n38_20096_c1 | 3300050490 | Bacteria | 2666 |
| 157 | nmdc:mga0k408_1415_c1 | 3300050493 | Bacteria | 6209 |
| 158 | nmdc:mga0k408_25469_c1 | 3300050493 | Bacteria | 3351 |
| 159 | nmdc:mga0k408_26249_c1 | 3300050493 | Bacteria | 3302 |
| 160 | nmdc:mga07m45_135_c1 | 3300050496 | Bacteria | 29265 |
| 161 | nmdc:mga07m45_2612_c1 | 3300050496 | Bacteria | 8484 |
| 162 | nmdc:mga07m45_6331_c1 | 3300050496 | Bacteria | 5978 |
| 163 | Ga0500635_0000248 | 3300053080 | Bacteria | 23504 |
| 164 | Ga0500578_0000263 | 3300053086 | Bacteria | 65524 |
| 165 | Ga0500644_0002012 | 3300053088 | Bacteria | 5176 |
| 166 | Ga0500651_0008727 | 3300053093 | Bacteria | 5986 |
| 167 | Ga0500593_000398 | 3300053117 | Bacteria | 17346 |
| 168 | Ga0500594_0000592 | 3300053118 | Bacteria | 7775 |
| 169 | Ga0500652_000226 | 3300053131 | Bacteria | 21494 |
| 170 | Ga0500658_0001609 | 3300053134 | Bacteria | 9013 |
| 171 | Ga0500559_0000470 | 3300053136 | Bacteria | 28674 |
| 172 | Ga0500568_0003300 | 3300053139 | Bacteria | 9096 |
| 173 | Ga0500568_0008185 | 3300053139 | Bacteria | 5065 |
| 174 | Ga0500619_000008 | 3300053154 | Bacteria | 70273 |
| 175 | Ga0500622_0000447 | 3300053156 | Bacteria | 39298 |
| 176 | Ga0500622_0000511 | 3300053156 | Bacteria | 36047 |
| 177 | Ga0500622_0001646 | 3300053156 | Bacteria | 17463 |
| 178 | Ga0500636_0004577 | 3300053177 | Bacteria | 7843 |
| 179 | Ga0500645_005284 | 3300053730 | Bacteria | 4781 |
| 180 | Ga0466962_0007362 | 3300061719 | Bacteria | 5282 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300037471 | Ga0395905_0012986 | Ga0395905_0012986_1974_4067 | 685 |
| 2 | 3300014968 | Ga0157379_10052014 | Ga0157379_100520142 | 701 |
| 3 | 3300053730 | Ga0500645_005284 | Ga0500645_005284_1308_3536 | 706 |
| 4 | 3300053117 | Ga0500593_000398 | Ga0500593_000398_7978_10149 | 707 |
| 5 | 3300026035 | Ga0207703_10024295 | Ga0207703_100242953 | 708 |
| 6 | 3300028794 | Ga0307515_10004839 | Ga0307515_1000483911 | 708 |
| 7 | 3300031616 | Ga0307508_10001110 | Ga0307508_100011103 | 709 |
| 8 | 3300005564 | Ga0070664_100050448 | Ga0070664_1000504482 | 715 |
| 9 | 3300042121 | Ga0450919_000597 | Ga0450919_000597_537_2738 | 715 |
| 10 | 3300009148 | Ga0105243_10047930 | Ga0105243_100479302 | 716 |
| 11 | 3300028786 | Ga0307517_10000052 | Ga0307517_1000005269 | 719 |
| 12 | 3300028794 | Ga0307515_10119164 | Ga0307515_101191642 | 719 |
| 13 | 3300031456 | Ga0307513_10110669 | Ga0307513_101106692 | 719 |
| 14 | 3300031507 | Ga0307509_10004093 | Ga0307509_1000409318 | 719 |
| 15 | 3300031507 | Ga0307509_10016763 | Ga0307509_100167633 | 719 |
| 16 | 3300031616 | Ga0307508_10017519 | Ga0307508_100175192 | 719 |
| 17 | 3300005328 | Ga0070676_10006116 | Ga0070676_100061166 | 720 |
| 18 | 3300005338 | Ga0068868_100032698 | Ga0068868_1000326982 | 720 |
| 19 | 3300005354 | Ga0070675_100022681 | Ga0070675_1000226813 | 720 |
| 20 | 3300005459 | Ga0068867_100004063 | Ga0068867_1000040634 | 720 |
| 21 | 3300025907 | Ga0207645_10006109 | Ga0207645_100061095 | 720 |
| 22 | 3300025940 | Ga0207691_10010922 | Ga0207691_100109224 | 720 |
| 23 | 3300026089 | Ga0207648_10009947 | Ga0207648_100099477 | 720 |
| 24 | 3300033180 | Ga0307510_10001123 | Ga0307510_100011237 | 720 |
| 25 | 3300005543 | Ga0070672_100017771 | Ga0070672_1000177715 | 721 |
| 26 | 3300005719 | Ga0068861_100001416 | Ga0068861_1000014162 | 721 |
| 27 | 3300005843 | Ga0068860_100000903 | Ga0068860_10000090315 | 721 |
| 28 | 3300006881 | Ga0068865_100000416 | Ga0068865_10000041622 | 721 |
| 29 | 3300013297 | Ga0157378_10002502 | Ga0157378_1000250210 | 721 |
| 30 | 3300014326 | Ga0157380_10079127 | Ga0157380_100791272 | 721 |
| 31 | 3300025899 | Ga0207642_10008367 | Ga0207642_100083672 | 721 |
| 32 | 3300026089 | Ga0207648_10005793 | Ga0207648_100057936 | 721 |
| 33 | 3300026116 | Ga0207674_10025753 | Ga0207674_100257535 | 721 |
| 34 | 3300026118 | Ga0207675_100062505 | Ga0207675_1000625052 | 721 |
| 35 | 3300028381 | Ga0268264_10007683 | Ga0268264_100076834 | 721 |
| 36 | 3300025304 | Ga0209257_1015417 | Ga0209257_10154172 | 722 |
| 37 | 3300046517 | Ga0495630_0031598 | Ga0495630_0031598_485_2722 | 722 |
| 38 | 3300046690 | Ga0495624_0025992 | Ga0495624_0025992_270_2507 | 722 |
| 39 | 3300047321 | Ga0495676_0017587 | Ga0495676_0017587_3385_5622 | 722 |
| 40 | 3300003775 | Ga0055524_1000203 | Ga0055524_10002035 | 723 |
| 41 | 3300003791 | Ga0055530_10000258 | Ga0055530_100002586 | 723 |
| 42 | 3300003792 | Ga0055540_1000023 | Ga0055540_100002373 | 723 |
| 43 | 3300006353 | Ga0075370_10022857 | Ga0075370_100228571 | 723 |
| 44 | 3300006946 | Ga0079104_1000273 | Ga0079104_100027310 | 723 |
| 45 | 3300025263 | Ga0209565_1004885 | Ga0209565_10048853 | 723 |
| 46 | 3300025298 | Ga0209050_1000748 | Ga0209050_100074832 | 723 |
| 47 | 3300025299 | Ga0209256_1000024 | Ga0209256_100002485 | 723 |
| 48 | 3300025303 | Ga0209051_1000079 | Ga0209051_1000079114 | 723 |
| 49 | 3300025304 | Ga0209257_1000183 | Ga0209257_100018372 | 723 |
| 50 | 3300027111 | Ga0209281_1000416 | Ga0209281_100041656 | 723 |
| 51 | 3300031649 | Ga0307514_10055370 | Ga0307514_100553702 | 723 |
| 52 | 3300048917 | Ga0496114_0024938 | Ga0496114_0024938_1471_3672 | 723 |
| 53 | 3300003756 | Ga0055533_1000010 | Ga0055533_1000010125 | 724 |
| 54 | 3300003759 | Ga0055525_1001110 | Ga0055525_10011104 | 724 |
| 55 | 3300025226 | Ga0209674_100003 | Ga0209674_1000031461 | 724 |
| 56 | 3300025230 | Ga0209563_100010 | Ga0209563_1000101188 | 724 |
| 57 | 3300025253 | Ga0209677_100093 | Ga0209677_10009365 | 724 |
| 58 | 3300046454 | Ga0495592_0000346 | Ga0495592_0000346_20233_22485 | 726 |
| 59 | 3300053088 | Ga0500644_0002012 | Ga0500644_0002012_417_2669 | 726 |
| 60 | 3300053093 | Ga0500651_0008727 | Ga0500651_0008727_3582_5834 | 726 |
| 61 | 3300053118 | Ga0500594_0000592 | Ga0500594_0000592_1458_3710 | 726 |
| 62 | 3300053136 | Ga0500559_0000470 | Ga0500559_0000470_10949_13201 | 726 |
| 63 | 3300053156 | Ga0500622_0000511 | Ga0500622_0000511_33462_35714 | 726 |
| 64 | 3300049759 | Ga0501262_000978 | Ga0501262_000978_957_3164 | 728 |
| 65 | 3300053139 | Ga0500568_0003300 | Ga0500568_0003300_103_2364 | 728 |
| 66 | 3300053156 | Ga0500622_0001646 | Ga0500622_0001646_13189_15495 | 728 |
| 67 | iso_pu_bacteria | 2643221644 | 2644247941 | 728 |
| 68 | 3300049682 | Ga0501252_000233 | Ga0501252_000233_276_2477 | 731 |
| 69 | 3300053134 | Ga0500658_0001609 | Ga0500658_0001609_1542_3803 | 731 |
| 70 | 3300005366 | Ga0070659_100004176 | Ga0070659_1000041764 | 732 |
| 71 | 3300025945 | Ga0207679_10009035 | Ga0207679_100090354 | 732 |
| 72 | 3300003316 | rootH1_10042432 | rootH1_100424321 | 736 |
| 73 | 3300003322 | rootL2_10041891 | rootL2_100418914 | 736 |
| 74 | 3300047472 | Ga0495686_0005328 | Ga0495686_0005328_4821_7034 | 736 |
| 75 | iso_pu_bacteria | 2643221654 | 2644304490 | 736 |
| 76 | 3300044656 | Ga0466969_0000037 | Ga0466969_0000037_48401_50641 | 737 |
| 77 | iso_pu_bacteria | 2585428057 | 2587726748 | 737 |
| 78 | iso_pu_bacteria | 2585428058 | 2587736946 | 737 |
| 79 | iso_pu_bacteria | 2588253510 | 2588295492 | 737 |
| 80 | iso_pu_bacteria | 2643221592 | 2643971931 | 737 |
| 81 | iso_pu_bacteria | 2643221625 | 2644139425 | 737 |
| 82 | iso_pu_bacteria | 2643221648 | 2644275035 | 737 |
| 83 | 3300053154 | Ga0500619_000008 | Ga0500619_000008_52198_54456 | 738 |
| 84 | 3300005367 | Ga0070667_100000677 | Ga0070667_1000006774 | 740 |
| 85 | 3300006195 | Ga0075366_10024872 | Ga0075366_100248722 | 740 |
| 86 | 3300025986 | Ga0207658_10001186 | Ga0207658_100011865 | 740 |
| 87 | 3300028794 | Ga0307515_10000645 | Ga0307515_1000064559 | 740 |
| 88 | 3300031507 | Ga0307509_10109103 | Ga0307509_101091032 | 740 |
| 89 | 3300044693 | Ga0466961_0024851 | Ga0466961_0024851_496_2769 | 740 |
| 90 | 3300046694 | Ga0495649_0006892 | Ga0495649_0006892_3842_6100 | 740 |
| 91 | 3300050493 | nmdc:mga0k408_1415_c1 | nmdc:mga0k408_1415_c1_2807_5056 | 740 |
| 92 | 3300003323 | rootH1_10020494 | rootH1_100204943 | 741 |
| 93 | 3300003771 | Ga0055526_1001195 | Ga0055526_10011955 | 741 |
| 94 | 3300003771 | Ga0055526_1004055 | Ga0055526_10040555 | 741 |
| 95 | 3300005262 | Ga0065165_1005244 | Ga0065165_10052443 | 741 |
| 96 | 3300005539 | Ga0068853_100092734 | Ga0068853_1000927342 | 741 |
| 97 | 3300005577 | Ga0068857_100017264 | Ga0068857_1000172647 | 741 |
| 98 | 3300006048 | Ga0075363_100002175 | Ga0075363_1000021752 | 741 |
| 99 | 3300006186 | Ga0075369_10005295 | Ga0075369_100052953 | 741 |
| 100 | 3300006353 | Ga0075370_10003114 | Ga0075370_100031147 | 741 |
| 101 | 3300009545 | Ga0105237_10019912 | Ga0105237_100199127 | 741 |
| 102 | 3300010375 | Ga0105239_10010335 | Ga0105239_100103352 | 741 |
| 103 | 3300025245 | Ga0207425_1000810 | Ga0207425_10008107 | 741 |
| 104 | 3300025258 | Ga0209129_1000025 | Ga0209129_1000025372 | 741 |
| 105 | 3300025273 | Ga0209673_1003363 | Ga0209673_10033635 | 741 |
| 106 | 3300025295 | Ga0209564_1000039 | Ga0209564_1000039372 | 741 |
| 107 | 3300025295 | Ga0209564_1000051 | Ga0209564_100005166 | 741 |
| 108 | 3300025297 | Ga0209758_1000163 | Ga0209758_1000163132 | 741 |
| 109 | 3300025297 | Ga0209758_1000287 | Ga0209758_100028792 | 741 |
| 110 | 3300025298 | Ga0209050_1000325 | Ga0209050_100032592 | 741 |
| 111 | 3300025914 | Ga0207671_10008158 | Ga0207671_100081582 | 741 |
| 112 | 3300026116 | Ga0207674_10031589 | Ga0207674_100315893 | 741 |
| 113 | 3300028794 | Ga0307515_10000006 | Ga0307515_1000000672 | 741 |
| 114 | 3300041512 | Ga0451853_1750824 | Ga0451853_1750824_1072_3315 | 741 |
| 115 | 3300046519 | Ga0495632_0013686 | Ga0495632_0013686_1144_3405 | 741 |
| 116 | 3300046519 | Ga0495632_0016094 | Ga0495632_0016094_1742_3985 | 741 |
| 117 | 3300047443 | Ga0495687_001455 | Ga0495687_001455_19297_21558 | 741 |
| 118 | 3300047443 | Ga0495687_002586 | Ga0495687_002586_7364_9631 | 741 |
| 119 | 3300050490 | nmdc:mga03n38_20096_c1 | nmdc:mga03n38_20096_c1_364_2631 | 741 |
| 120 | 3300050493 | nmdc:mga0k408_25469_c1 | nmdc:mga0k408_25469_c1_150_2417 | 741 |
| 121 | 3300050493 | nmdc:mga0k408_26249_c1 | nmdc:mga0k408_26249_c1_925_3186 | 741 |
| 122 | 3300050496 | nmdc:mga07m45_135_c1 | nmdc:mga07m45_135_c1_15382_17646 | 741 |
| 123 | 3300050496 | nmdc:mga07m45_2612_c1 | nmdc:mga07m45_2612_c1_4806_7049 | 741 |
| 124 | 3300050496 | nmdc:mga07m45_6331_c1 | nmdc:mga07m45_6331_c1_150_2417 | 741 |
| 125 | 3300053086 | Ga0500578_0000263 | Ga0500578_0000263_621_2864 | 741 |
| 126 | 3300053131 | Ga0500652_000226 | Ga0500652_000226_7881_10124 | 741 |
| 127 | 3300053139 | Ga0500568_0008185 | Ga0500568_0008185_613_2856 | 741 |
| 128 | 3300053156 | Ga0500622_0000447 | Ga0500622_0000447_29175_31418 | 741 |
| 129 | 3300053080 | Ga0500635_0000248 | Ga0500635_0000248_10974_13202 | 742 |
| 130 | 3300003761 | Ga0055535_1000272 | Ga0055535_100027227 | 743 |
| 131 | 3300003763 | Ga0055529_1000303 | Ga0055529_100030329 | 743 |
| 132 | 3300005577 | Ga0068857_100002227 | Ga0068857_10000222710 | 743 |
| 133 | 3300005578 | Ga0068854_100033562 | Ga0068854_1000335622 | 743 |
| 134 | 3300005614 | Ga0068856_100001705 | Ga0068856_10000170512 | 743 |
| 135 | 3300013296 | Ga0157374_10030002 | Ga0157374_100300021 | 743 |
| 136 | 3300025231 | Ga0207427_100468 | Ga0207427_10046818 | 743 |
| 137 | 3300025242 | Ga0209258_100163 | Ga0209258_10016395 | 743 |
| 138 | 3300025246 | Ga0209646_1000226 | Ga0209646_100022643 | 743 |
| 139 | 3300025250 | Ga0209026_1000021 | Ga0209026_1000021150 | 743 |
| 140 | 3300025253 | Ga0209677_100699 | Ga0209677_1006998 | 743 |
| 141 | 3300025256 | Ga0209759_1000025 | Ga0209759_1000025150 | 743 |
| 142 | 3300025256 | Ga0209759_1001380 | Ga0209759_10013809 | 743 |
| 143 | 3300025256 | Ga0209759_1003891 | Ga0209759_10038913 | 743 |
| 144 | 3300025272 | Ga0209455_1000059 | Ga0209455_1000059198 | 743 |
| 145 | 3300025913 | Ga0207695_10031302 | Ga0207695_100313022 | 743 |
| 146 | 3300025913 | Ga0207695_10117459 | Ga0207695_101174591 | 743 |
| 147 | 3300025919 | Ga0207657_10056533 | Ga0207657_100565331 | 743 |
| 148 | 3300025942 | Ga0207689_10058192 | Ga0207689_100581922 | 743 |
| 149 | 3300025949 | Ga0207667_10032549 | Ga0207667_100325493 | 743 |
| 150 | 3300025949 | Ga0207667_10033087 | Ga0207667_100330872 | 743 |
| 151 | 3300025960 | Ga0207651_10004013 | Ga0207651_100040135 | 743 |
| 152 | 3300026041 | Ga0207639_10049934 | Ga0207639_100499341 | 743 |
| 153 | 3300026078 | Ga0207702_10000777 | Ga0207702_100007774 | 743 |
| 154 | 3300028666 | Ga0265336_10000051 | Ga0265336_1000005145 | 743 |
| 155 | 3300029957 | Ga0265324_10000292 | Ga0265324_1000029215 | 743 |
| 156 | 3300031730 | Ga0307516_10000138 | Ga0307516_1000013847 | 743 |
| 157 | 3300031730 | Ga0307516_10001369 | Ga0307516_100013692 | 743 |
| 158 | 3300037466 | Ga0395898_0019349 | Ga0395898_0019349_3924_6155 | 743 |
| 159 | 3300038443 | Ga0395901_0001733 | Ga0395901_0001733_17699_19930 | 743 |
| 160 | 3300044706 | Ga0466964_0001961 | Ga0466964_0001961_3663_5894 | 743 |
| 161 | 3300046475 | Ga0495639_0005879 | Ga0495639_0005879_1878_4112 | 743 |
| 162 | 3300046506 | Ga0495583_0000284 | Ga0495583_0000284_72434_74665 | 743 |
| 163 | 3300053177 | Ga0500636_0004577 | Ga0500636_0004577_2015_4246 | 743 |
| 164 | 3300028794 | Ga0307515_10001163 | Ga0307515_1000116337 | 744 |
| 165 | 3300031616 | Ga0307508_10000047 | Ga0307508_1000004739 | 744 |
| 166 | 3300031649 | Ga0307514_10003965 | Ga0307514_100039653 | 744 |
| 167 | 3300005333 | Ga0070677_10009670 | Ga0070677_100096702 | 746 |
| 168 | 3300027695 | Ga0209966_1000207 | Ga0209966_100020723 | 746 |
| 169 | 3300005467 | Ga0070706_100000546 | Ga0070706_1000005466 | 747 |
| 170 | 3300005468 | Ga0070707_100015876 | Ga0070707_1000158764 | 747 |
| 171 | 3300005471 | Ga0070698_100049586 | Ga0070698_1000495863 | 747 |
| 172 | 3300006353 | Ga0075370_10005217 | Ga0075370_100052172 | 747 |
| 173 | 3300014968 | Ga0157379_10008791 | Ga0157379_100087914 | 756 |
| 174 | 3300036401 | Ga0373937_0013714 | Ga0373937_0013714_4671_6998 | 756 |
| 175 | 3300009093 | Ga0105240_10074411 | Ga0105240_100744113 | 762 |
| 176 | 3300025256 | Ga0209759_1005056 | Ga0209759_10050563 | 762 |
| 177 | 3300046694 | Ga0495649_0001533 | Ga0495649_0001533_2162_4453 | 762 |
| 178 | 3300009174 | Ga0105241_10085635 | Ga0105241_100856352 | 763 |
| 179 | 3300044656 | Ga0466969_0001138 | Ga0466969_0001138_1335_3626 | 763 |
| 180 | 3300044684 | Ga0466966_0005078 | Ga0466966_0005078_4894_7185 | 763 |
| 181 | 3300044719 | Ga0466971_0003933 | Ga0466971_0003933_1239_3530 | 763 |
| 182 | 3300045049 | Ga0466959_0011665 | Ga0466959_0011665_287_2578 | 763 |
| 183 | 3300061719 | Ga0466962_0007362 | Ga0466962_0007362_392_2683 | 763 |
| 184 | 3300002705 | JGI25156J39149_1000114 | JGI25156J39149_100011415 | 765 |
| 185 | 3300002738 | JGI25154J39366_1000675 | JGI25154J39366_10006756 | 765 |
| 186 | 3300002741 | JGI25157J39369_1000015 | JGI25157J39369_1000015149 | 765 |
| 187 | 3300003752 | Ga0055539_1001223 | Ga0055539_10012232 | 765 |
| 188 | 3300010375 | Ga0105239_10007802 | Ga0105239_100078022 | 765 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1uqw-assembly2.cif.gz_B | crystal structure of ylib protein from escherichia coi | 0.858 | 60 | 713 |
| 1uqw-assembly2.cif.gz_B | crystal structure of ylib protein from escherichia coi | 0.8547 | 60 | 713 |
| 3tpa-assembly1.cif.gz_A | structure of hbpa2 from haemophilus parasuis | 0.8319 | 62 | 713 |
| 3tpa-assembly1.cif.gz_A | structure of hbpa2 from haemophilus parasuis | 0.8275 | 62 | 713 |
| 5u4o-assembly1.cif.gz_A-2 | a 2.05a x-ray structureof a bacterial extracellular solute-binding protein, family 5 for bacillus anthracis str. ames | 0.8187 | 60 | 695 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 6npoA01 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.8874 | 323 | 398 | 3.40.190.10 |
| 5f1qB01 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.8836 | 317 | 398 | 3.40.190.10 |
| 4qflB01 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.8761 | 321 | 398 | 3.40.190.10 |
| af_P76128_273_484_3.10.105.10 | Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 | 0.8631 | 436 | 683 | 3.10.105.10 |
| af_P75797_272_481_3.40.50.1000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.863 | 464 | 679 | 3.40.50.1000 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A847VG55-F1-model_v4 | Peptide ABC transporter substrate-binding protein | 0.9553 | 338 | 765 |
GO:0015031
GO:0015833 GO:0016020 GO:0030313 GO:1904680 |
| AF-A0A5C6TZK9-F1-model_v4 | ABC transporter permease subunit | 0.9482 | 19 | 765 |
GO:0005886
GO:0015031 GO:0015833 GO:0055085 |
| AF-A0A3D0HBK8-F1-model_v4 | Peptide ABC transporter substrate-binding protein | 0.9419 | 45 | 693 |
GO:0015031
GO:0015833 GO:0030288 GO:0043190 GO:1904680 |
| AF-A0A351A3B0-F1-model_v4 | Peptide ABC transporter substrate-binding protein | 0.9385 | 36 | 314 |
|
| AF-A0A847VG55-F1-model_v4 | Peptide ABC transporter substrate-binding protein | 0.9382 | 338 | 765 |
GO:0015031
GO:0015833 GO:0016020 GO:0030313 GO:1904680 |
Predicted Structure (AlphaFold2)
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