F289890
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 188 | 122 | 188 | 537 |
Family's Representative Sequence
| Representative Sequence | 3300046684|Ga0495669_0005704|Ga0495669_0005704_2980_4659 |
| Length | 524 |
| Sequence | MQPLDWAVVVAYLVWIVYDGLRRSKGTDKVDGYFLGNRTLPWWAIGLSVMATQMSAVTLVGTTGQAYLTGLRFVQFYFGLPLAMIILSMTAVPFFHRAKVYTAYEYLERRFDVRVRTLTSFLFLMGRAFSLGVTLTAPAVVMSAILGWPMPLTVLAICVPMIFYTTLGGVQAVAWTDVKQMGIIVSGMLAAVVVLILGIPHDVGVVQALHLAGATGRLKAVDFQFNLRETYTIWSGLIGGLFLMLAYFGCDQSQVQRYLTAKSEGEARDSLMMSAFVKIPLQLLVLSIGVLVFIFYLFQTPPMLFNRAYDSQVAAGPHAAEYADLERIAIVKDTTGDSRYTDVNYVFPTFITTHMPIGLVGLLIAAIFAAAMSASAGELNALATATIIDFYRRLFVKEAEDRHYLLVSKLATIGWGLFACVVAMYAANQGSLIEVVNRYGSFFYGSLLGVFMLAIVTRRATASGAFWGLIAGMAVVLTVAFSPWTRDIAFLWHNVIGAVVVVVVGLAVSAIETGQSAKGIGHRA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 12 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 22 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 26 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 32 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 33 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 35 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 36 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 37 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 38 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 39 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 40 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 42 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 43 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 44 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 45 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 46 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 48 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 82 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300034818 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 | Metagenome | Rhizosphere |
| 85 | 3300035090 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 | Metagenome | Rhizosphere |
| 86 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 87 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 88 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 89 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 90 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 91 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 92 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 93 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 94 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 95 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 107 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 109 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 110 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 113 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 5.85 |
| Rhizosphere | 94.15 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0065712_10003987 | 3300005290 | Bacteria | 6170 |
| 2 | Ga0070683_100028474 | 3300005329 | Bacteria | 5049 |
| 3 | Ga0070677_10013643 | 3300005333 | Bacteria | 2846 |
| 4 | Ga0070660_100004068 | 3300005339 | Bacteria | 10092 |
| 5 | Ga0070691_10000846 | 3300005341 | Bacteria | 12369 |
| 6 | Ga0070661_100032150 | 3300005344 | Bacteria | 3797 |
| 7 | Ga0070669_100006790 | 3300005353 | Bacteria | 8236 |
| 8 | Ga0070669_100088476 | 3300005353 | Bacteria | 2318 |
| 9 | Ga0070675_100000035 | 3300005354 | Bacteria | 86571 |
| 10 | Ga0070674_100007518 | 3300005356 | Bacteria | 6432 |
| 11 | Ga0070673_100070332 | 3300005364 | Bacteria | 2808 |
| 12 | Ga0070673_100138060 | 3300005364 | Bacteria | 2054 |
| 13 | Ga0070673_100142546 | 3300005364 | Bacteria | 2023 |
| 14 | Ga0070688_100047274 | 3300005365 | Bacteria | 2669 |
| 15 | Ga0070709_10076182 | 3300005434 | Bacteria | 2178 |
| 16 | Ga0070713_100001511 | 3300005436 | Bacteria | 14811 |
| 17 | Ga0070701_10048512 | 3300005438 | Bacteria | 2192 |
| 18 | Ga0070700_100018647 | 3300005441 | Bacteria | 3992 |
| 19 | Ga0070694_100005650 | 3300005444 | Bacteria | 7580 |
| 20 | Ga0070694_100013707 | 3300005444 | Bacteria | 5066 |
| 21 | Ga0070708_100028401 | 3300005445 | Bacteria | 4813 |
| 22 | Ga0070708_100047683 | 3300005445 | Bacteria | 3785 |
| 23 | Ga0070678_100057811 | 3300005456 | Bacteria | 2843 |
| 24 | Ga0070662_100044334 | 3300005457 | Bacteria | 3185 |
| 25 | Ga0070681_10003371 | 3300005458 | Bacteria | 14936 |
| 26 | Ga0068867_100004261 | 3300005459 | Bacteria | 10064 |
| 27 | Ga0068867_100055987 | 3300005459 | Bacteria | 2917 |
| 28 | Ga0070707_100011328 | 3300005468 | Bacteria | 8311 |
| 29 | Ga0070707_100048232 | 3300005468 | Bacteria | 4080 |
| 30 | Ga0070698_100039387 | 3300005471 | Bacteria | 4865 |
| 31 | Ga0070698_100089454 | 3300005471 | Bacteria | 3063 |
| 32 | Ga0070698_100139218 | 3300005471 | Bacteria | 2380 |
| 33 | Ga0070699_100000589 | 3300005518 | Bacteria | 34198 |
| 34 | Ga0070679_100009967 | 3300005530 | Bacteria | 8993 |
| 35 | Ga0070679_100124215 | 3300005530 | Bacteria | 2564 |
| 36 | Ga0070697_100009337 | 3300005536 | Bacteria | 7668 |
| 37 | Ga0070672_100119876 | 3300005543 | Bacteria | 2153 |
| 38 | Ga0070695_100021829 | 3300005545 | Bacteria | 3922 |
| 39 | Ga0070665_100005258 | 3300005548 | Bacteria | 13380 |
| 40 | Ga0070704_100014190 | 3300005549 | Bacteria | 4970 |
| 41 | Ga0070704_100020176 | 3300005549 | Bacteria | 4293 |
| 42 | Ga0068855_100274350 | 3300005563 | Bacteria | 1874 |
| 43 | Ga0068854_100003187 | 3300005578 | Bacteria | 10242 |
| 44 | Ga0068854_100045517 | 3300005578 | Bacteria | 3121 |
| 45 | Ga0070702_100017684 | 3300005615 | Bacteria | 3683 |
| 46 | Ga0068859_100022183 | 3300005617 | Bacteria | 6365 |
| 47 | Ga0068861_100017391 | 3300005719 | Bacteria | 5103 |
| 48 | Ga0068861_100069792 | 3300005719 | Bacteria | 2719 |
| 49 | Ga0068863_100000654 | 3300005841 | Bacteria | 35100 |
| 50 | Ga0068858_100001859 | 3300005842 | Bacteria | 21533 |
| 51 | Ga0068862_100005384 | 3300005844 | Bacteria | 10708 |
| 52 | Ga0081455_10062435 | 3300005937 | Bacteria | 3131 |
| 53 | Ga0097621_100005757 | 3300006237 | Bacteria | 8746 |
| 54 | Ga0097621_100024699 | 3300006237 | Bacteria | 4696 |
| 55 | Ga0097621_100111665 | 3300006237 | Bacteria | 2310 |
| 56 | Ga0068871_100003202 | 3300006358 | Bacteria | 11227 |
| 57 | Ga0068871_100003880 | 3300006358 | Bacteria | 10305 |
| 58 | Ga0068871_100180215 | 3300006358 | Bacteria | 1815 |
| 59 | Ga0075428_100217319 | 3300006844 | Bacteria | 2064 |
| 60 | Ga0075433_10015034 | 3300006852 | Bacteria | 6336 |
| 61 | Ga0075433_10165412 | 3300006852 | Bacteria | 1969 |
| 62 | Ga0075434_100009613 | 3300006871 | Bacteria | 9030 |
| 63 | Ga0075434_100071945 | 3300006871 | Bacteria | 3450 |
| 64 | Ga0068865_100006947 | 3300006881 | Bacteria | 6941 |
| 65 | Ga0097620_100022183 | 3300006931 | Bacteria | 6365 |
| 66 | Ga0075435_100003188 | 3300007076 | Bacteria | 11100 |
| 67 | Ga0075435_100014611 | 3300007076 | Bacteria | 5876 |
| 68 | Ga0105240_10015012 | 3300009093 | Bacteria | 10546 |
| 69 | Ga0111539_10095831 | 3300009094 | Bacteria | 3485 |
| 70 | Ga0111539_10131981 | 3300009094 | Bacteria | 2925 |
| 71 | Ga0111539_10188516 | 3300009094 | Bacteria | 2407 |
| 72 | Ga0105245_10025500 | 3300009098 | Bacteria | 5199 |
| 73 | Ga0105245_10037653 | 3300009098 | Bacteria | 4301 |
| 74 | Ga0105245_10176148 | 3300009098 | Bacteria | 2040 |
| 75 | Ga0105247_10017009 | 3300009101 | Bacteria | 4363 |
| 76 | Ga0114129_10009374 | 3300009147 | Bacteria | 13956 |
| 77 | Ga0114129_10010626 | 3300009147 | Bacteria | 13128 |
| 78 | Ga0114129_10016767 | 3300009147 | Bacteria | 10429 |
| 79 | Ga0114129_10016913 | 3300009147 | Bacteria | 10385 |
| 80 | Ga0114129_10034892 | 3300009147 | Bacteria | 7106 |
| 81 | Ga0114129_10047336 | 3300009147 | Bacteria | 6043 |
| 82 | Ga0114129_10050114 | 3300009147 | Bacteria | 5866 |
| 83 | Ga0114129_10105975 | 3300009147 | Bacteria | 3884 |
| 84 | Ga0114129_10143172 | 3300009147 | Bacteria | 3276 |
| 85 | Ga0105242_10008568 | 3300009176 | Bacteria | 7852 |
| 86 | Ga0105248_10008065 | 3300009177 | Bacteria | 11562 |
| 87 | Ga0105248_10009269 | 3300009177 | Bacteria | 10835 |
| 88 | Ga0105248_10011180 | 3300009177 | Bacteria | 9901 |
| 89 | Ga0105248_10048954 | 3300009177 | Bacteria | 4741 |
| 90 | Ga0105248_10142649 | 3300009177 | Bacteria | 2702 |
| 91 | Ga0157380_10080701 | 3300014326 | Bacteria | 2659 |
| 92 | Ga0157380_10155173 | 3300014326 | Bacteria | 1983 |
| 93 | Ga0157377_10016654 | 3300014745 | Bacteria | 3785 |
| 94 | Ga0157379_10004341 | 3300014968 | Bacteria | 12128 |
| 95 | Ga0157379_10178767 | 3300014968 | Bacteria | 1917 |
| 96 | Ga0157376_10013898 | 3300014969 | Bacteria | 6020 |
| 97 | Ga0207645_10001628 | 3300025907 | Bacteria | 18323 |
| 98 | Ga0207645_10054802 | 3300025907 | Bacteria | 2547 |
| 99 | Ga0207643_10106843 | 3300025908 | Bacteria | 1645 |
| 100 | Ga0207707_10058403 | 3300025912 | Bacteria | 3357 |
| 101 | Ga0207657_10040565 | 3300025919 | Bacteria | 4123 |
| 102 | Ga0207652_10014341 | 3300025921 | Bacteria | 6418 |
| 103 | Ga0207652_10131498 | 3300025921 | Bacteria | 2232 |
| 104 | Ga0207646_10035903 | 3300025922 | Bacteria | 4475 |
| 105 | Ga0207646_10147427 | 3300025922 | Bacteria | 2121 |
| 106 | Ga0207681_10004571 | 3300025923 | Bacteria | 8507 |
| 107 | Ga0207681_10057934 | 3300025923 | Bacteria | 2650 |
| 108 | Ga0207681_10070925 | 3300025923 | Bacteria | 2428 |
| 109 | Ga0207650_10135140 | 3300025925 | Unclassified | 1934 |
| 110 | Ga0207659_10002714 | 3300025926 | Bacteria | 10552 |
| 111 | Ga0207687_10106162 | 3300025927 | Bacteria | 2076 |
| 112 | Ga0207706_10138421 | 3300025933 | Bacteria | 2141 |
| 113 | Ga0207686_10043207 | 3300025934 | Bacteria | 2760 |
| 114 | Ga0207704_10004236 | 3300025938 | Bacteria | 6555 |
| 115 | Ga0207691_10048394 | 3300025940 | Bacteria | 3899 |
| 116 | Ga0207711_10046692 | 3300025941 | Bacteria | 3701 |
| 117 | Ga0207711_10098504 | 3300025941 | Bacteria | 2583 |
| 118 | Ga0207679_10076807 | 3300025945 | Bacteria | 2539 |
| 119 | Ga0207703_10033084 | 3300026035 | Bacteria | 4096 |
| 120 | Ga0207703_10140500 | 3300026035 | Bacteria | 2095 |
| 121 | Ga0207708_10023432 | 3300026075 | Bacteria | 4666 |
| 122 | Ga0207641_10000693 | 3300026088 | Bacteria | 36308 |
| 123 | Ga0207648_10004443 | 3300026089 | Bacteria | 14388 |
| 124 | Ga0207648_10029745 | 3300026089 | Bacteria | 4844 |
| 125 | Ga0207675_100007011 | 3300026118 | Bacteria | 10656 |
| 126 | Ga0207675_100032239 | 3300026118 | Bacteria | 4882 |
| 127 | Ga0207683_10021674 | 3300026121 | Bacteria | 5506 |
| 128 | Ga0207683_10062565 | 3300026121 | Bacteria | 3278 |
| 129 | Ga0207428_10028482 | 3300027907 | Bacteria | 4641 |
| 130 | Ga0268266_10024028 | 3300028379 | Bacteria | 5186 |
| 131 | Ga0268265_10004437 | 3300028380 | Bacteria | 9743 |
| 132 | Ga0373950_0004305 | 3300034818 | Bacteria | 2080 |
| 133 | Ga0373949_0002765 | 3300035090 | Bacteria | 4379 |
| 134 | Ga0373951_0004015 | 3300035091 | Bacteria | 3524 |
| 135 | Ga0373932_0001838 | 3300035112 | Bacteria | 5678 |
| 136 | Ga0373936_0006622 | 3300035113 | Bacteria | 4363 |
| 137 | Ga0373939_0001094 | 3300035114 | Bacteria | 6653 |
| 138 | Ga0373960_0000149 | 3300035121 | Bacteria | 11782 |
| 139 | Ga0373942_0001584 | 3300035207 | Bacteria | 5834 |
| 140 | Ga0373962_0010113 | 3300035242 | Bacteria | 2346 |
| 141 | Ga0373924_0001947 | 3300035410 | Bacteria | 6875 |
| 142 | Ga0373935_0022872 | 3300035692 | Bacteria | 3837 |
| 143 | Ga0495639_0052226 | 3300046475 | Bacteria | 1860 |
| 144 | Ga0495618_0109495 | 3300046514 | Bacteria | 1769 |
| 145 | Ga0495630_0003824 | 3300046517 | Bacteria | 10511 |
| 146 | Ga0495652_0119941 | 3300046529 | Bacteria | 2099 |
| 147 | Ga0495667_0008997 | 3300046559 | Bacteria | 6786 |
| 148 | Ga0495647_0017825 | 3300046681 | Bacteria | 2518 |
| 149 | Ga0495658_0068395 | 3300046683 | Bacteria | 2056 |
| 150 | Ga0495669_0005704 | 3300046684 | Bacteria | 5191 |
| 151 | Ga0495613_0007903 | 3300046689 | Bacteria | 7912 |
| 152 | Ga0495674_0141117 | 3300047319 | Bacteria | 2025 |
| 153 | Ga0495684_0022660 | 3300047471 | Bacteria | 4830 |
| 154 | Ga0495684_0052726 | 3300047471 | Bacteria | 3104 |
| 155 | Ga0496100_0003326 | 3300048903 | Bacteria | 8371 |
| 156 | Ga0496101_0001009 | 3300048904 | Bacteria | 16577 |
| 157 | Ga0496102_0049115 | 3300048905 | Bacteria | 3838 |
| 158 | Ga0496104_0009808 | 3300048907 | Bacteria | 8535 |
| 159 | Ga0496104_0146114 | 3300048907 | Bacteria | 2271 |
| 160 | Ga0496108_0001495 | 3300048911 | Bacteria | 18489 |
| 161 | Ga0496112_0089342 | 3300048915 | Bacteria | 3049 |
| 162 | Ga0496114_0003198 | 3300048917 | Bacteria | 12560 |
| 163 | Ga0496114_0125212 | 3300048917 | Bacteria | 2215 |
| 164 | Ga0496114_0193015 | 3300048917 | Bacteria | 1782 |
| 165 | Ga0496114_0217416 | 3300048917 | Bacteria | 1677 |
| 166 | Ga0501034_0008073 | 3300049571 | Bacteria | 11162 |
| 167 | Ga0501047_0055108 | 3300049581 | Bacteria | 3845 |
| 168 | Ga0501044_0003342 | 3300049823 | Bacteria | 18091 |
| 169 | nmdc:mga05p37_10088_c1 | 3300050507 | Bacteria | 11210 |
| 170 | nmdc:mga05p37_160426_c1 | 3300050507 | Bacteria | 2747 |
| 171 | nmdc:mga05p37_25089_c1 | 3300050507 | Bacteria | 7248 |
| 172 | nmdc:mga05p37_26038_c2 | 3300050507 | Bacteria | 4726 |
| 173 | nmdc:mga05p37_288303_c1 | 3300050507 | Bacteria | 1955 |
| 174 | nmdc:mga05p37_9830_c1 | 3300050507 | Bacteria | 11354 |
| 175 | nmdc:mga08y16_11111_c1 | 3300050511 | Bacteria | 9455 |
| 176 | nmdc:mga08y16_5818_c1 | 3300050511 | Bacteria | 12921 |
| 177 | nmdc:mga0n895_82710_c1 | 3300050512 | Bacteria | 3201 |
| 178 | nmdc:mga0n895_96238_c1 | 3300050512 | Unclassified | 2965 |
| 179 | nmdc:mga0rr50_1155_c1 | 3300050513 | Bacteria | 14374 |
| 180 | nmdc:mga0rr50_166881_c1 | 3300050513 | Bacteria | 1791 |
| 181 | nmdc:mga0a205_116685_c1 | 3300050515 | Bacteria | 2568 |
| 182 | nmdc:mga0a205_12090_c1 | 3300050515 | Bacteria | 7977 |
| 183 | nmdc:mga0a205_175676_c1 | 3300050515 | Bacteria | 2037 |
| 184 | nmdc:mga0a205_29786_c1 | 3300050515 | Bacteria | 5223 |
| 185 | nmdc:mga0a205_68797_c1 | 3300050515 | Bacteria | 3419 |
| 186 | nmdc:mga0a205_8242_c1 | 3300050515 | Bacteria | 9095 |
| 187 | Ga0495595_0058220 | 3300053084 | Bacteria | 1804 |
| 188 | Ga0495619_0021488 | 3300053085 | Bacteria | 4121 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300025908 | Ga0207643_10106843 | Ga0207643_101068432 | 434 |
| 2 | 3300050507 | nmdc:mga05p37_160426_c1 | nmdc:mga05p37_160426_c1_1156_2721 | 479 |
| 3 | 3300048917 | Ga0496114_0217416 | Ga0496114_0217416_153_1667 | 483 |
| 4 | 3300046517 | Ga0495630_0003824 | Ga0495630_0003824_7453_9108 | 484 |
| 5 | 3300046529 | Ga0495652_0119941 | Ga0495652_0119941_43_1698 | 484 |
| 6 | 3300046559 | Ga0495667_0008997 | Ga0495667_0008997_4654_6309 | 484 |
| 7 | 3300046689 | Ga0495613_0007903 | Ga0495613_0007903_3461_5116 | 484 |
| 8 | 3300047471 | Ga0495684_0022660 | Ga0495684_0022660_455_2110 | 484 |
| 9 | 3300053084 | Ga0495595_0058220 | Ga0495595_0058220_18_1682 | 484 |
| 10 | 3300050515 | nmdc:mga0a205_12090_c1 | nmdc:mga0a205_12090_c1_65_1555 | 489 |
| 11 | 3300046684 | Ga0495669_0005704 | Ga0495669_0005704_2980_4659 | 503 |
| 12 | 3300005341 | Ga0070691_10000846 | Ga0070691_1000084610 | 504 |
| 13 | 3300005364 | Ga0070673_100070332 | Ga0070673_1000703322 | 504 |
| 14 | 3300005364 | Ga0070673_100138060 | Ga0070673_1001380601 | 504 |
| 15 | 3300005438 | Ga0070701_10048512 | Ga0070701_100485121 | 504 |
| 16 | 3300005441 | Ga0070700_100018647 | Ga0070700_1000186473 | 504 |
| 17 | 3300005444 | Ga0070694_100013707 | Ga0070694_1000137072 | 504 |
| 18 | 3300005459 | Ga0068867_100004261 | Ga0068867_1000042617 | 504 |
| 19 | 3300005545 | Ga0070695_100021829 | Ga0070695_1000218291 | 504 |
| 20 | 3300005549 | Ga0070704_100014190 | Ga0070704_1000141904 | 504 |
| 21 | 3300005578 | Ga0068854_100045517 | Ga0068854_1000455172 | 504 |
| 22 | 3300005615 | Ga0070702_100017684 | Ga0070702_1000176842 | 504 |
| 23 | 3300005719 | Ga0068861_100017391 | Ga0068861_1000173913 | 504 |
| 24 | 3300006871 | Ga0075434_100009613 | Ga0075434_1000096135 | 504 |
| 25 | 3300009094 | Ga0111539_10131981 | Ga0111539_101319811 | 504 |
| 26 | 3300014326 | Ga0157380_10155173 | Ga0157380_101551731 | 504 |
| 27 | 3300025907 | Ga0207645_10001628 | Ga0207645_1000162816 | 504 |
| 28 | 3300025923 | Ga0207681_10057934 | Ga0207681_100579343 | 504 |
| 29 | 3300026075 | Ga0207708_10023432 | Ga0207708_100234321 | 504 |
| 30 | 3300026089 | Ga0207648_10004443 | Ga0207648_100044439 | 504 |
| 31 | 3300026118 | Ga0207675_100007011 | Ga0207675_1000070115 | 504 |
| 32 | 3300050512 | nmdc:mga0n895_82710_c1 | nmdc:mga0n895_82710_c1_157_1830 | 504 |
| 33 | 3300005353 | Ga0070669_100088476 | Ga0070669_1000884762 | 505 |
| 34 | 3300005457 | Ga0070662_100044334 | Ga0070662_1000443342 | 505 |
| 35 | 3300009147 | Ga0114129_10034892 | Ga0114129_100348923 | 505 |
| 36 | 3300025923 | Ga0207681_10070925 | Ga0207681_100709252 | 505 |
| 37 | 3300050513 | nmdc:mga0rr50_166881_c1 | nmdc:mga0rr50_166881_c1_47_1720 | 505 |
| 38 | 3300050515 | nmdc:mga0a205_29786_c1 | nmdc:mga0a205_29786_c1_1331_3004 | 505 |
| 39 | 3300005719 | Ga0068861_100069792 | Ga0068861_1000697921 | 506 |
| 40 | 3300026118 | Ga0207675_100032239 | Ga0207675_1000322392 | 507 |
| 41 | 3300005937 | Ga0081455_10062435 | Ga0081455_100624353 | 508 |
| 42 | 3300009147 | Ga0114129_10009374 | Ga0114129_100093748 | 508 |
| 43 | 3300025907 | Ga0207645_10054802 | Ga0207645_100548021 | 508 |
| 44 | 3300009094 | Ga0111539_10188516 | Ga0111539_101885163 | 509 |
| 45 | 3300009177 | Ga0105248_10048954 | Ga0105248_100489543 | 509 |
| 46 | 3300027907 | Ga0207428_10028482 | Ga0207428_100284823 | 509 |
| 47 | 3300050511 | nmdc:mga08y16_11111_c1 | nmdc:mga08y16_11111_c1_652_2316 | 509 |
| 48 | 3300050515 | nmdc:mga0a205_175676_c1 | nmdc:mga0a205_175676_c1_300_1958 | 509 |
| 49 | 3300005344 | Ga0070661_100032150 | Ga0070661_1000321503 | 513 |
| 50 | 3300005458 | Ga0070681_10003371 | Ga0070681_100033714 | 513 |
| 51 | 3300005530 | Ga0070679_100009967 | Ga0070679_1000099675 | 513 |
| 52 | 3300025921 | Ga0207652_10014341 | Ga0207652_100143415 | 513 |
| 53 | 3300025941 | Ga0207711_10098504 | Ga0207711_100985043 | 513 |
| 54 | 3300009147 | Ga0114129_10047336 | Ga0114129_100473364 | 514 |
| 55 | 3300035113 | Ga0373936_0006622 | Ga0373936_0006622_2006_3658 | 514 |
| 56 | 3300035692 | Ga0373935_0022872 | Ga0373935_0022872_1165_2817 | 514 |
| 57 | 3300050507 | nmdc:mga05p37_10088_c1 | nmdc:mga05p37_10088_c1_8034_9713 | 514 |
| 58 | 3300005471 | Ga0070698_100039387 | Ga0070698_1000393874 | 515 |
| 59 | 3300005444 | Ga0070694_100005650 | Ga0070694_1000056505 | 519 |
| 60 | 3300005468 | Ga0070707_100011328 | Ga0070707_1000113285 | 519 |
| 61 | 3300005471 | Ga0070698_100139218 | Ga0070698_1001392183 | 519 |
| 62 | 3300005549 | Ga0070704_100020176 | Ga0070704_1000201763 | 519 |
| 63 | 3300006852 | Ga0075433_10015034 | Ga0075433_100150345 | 519 |
| 64 | 3300009147 | Ga0114129_10010626 | Ga0114129_100106267 | 519 |
| 65 | 3300050515 | nmdc:mga0a205_8242_c1 | nmdc:mga0a205_8242_c1_4437_6122 | 519 |
| 66 | 3300046681 | Ga0495647_0017825 | Ga0495647_0017825_427_2082 | 521 |
| 67 | 3300048915 | Ga0496112_0089342 | Ga0496112_0089342_1364_3028 | 521 |
| 68 | 3300035410 | Ga0373924_0001947 | Ga0373924_0001947_4695_6347 | 522 |
| 69 | 3300005445 | Ga0070708_100047683 | Ga0070708_1000476832 | 524 |
| 70 | 3300006852 | Ga0075433_10165412 | Ga0075433_101654121 | 528 |
| 71 | 3300009093 | Ga0105240_10015012 | Ga0105240_100150123 | 528 |
| 72 | 3300009098 | Ga0105245_10025500 | Ga0105245_100255002 | 528 |
| 73 | 3300009147 | Ga0114129_10050114 | Ga0114129_100501143 | 528 |
| 74 | 3300050507 | nmdc:mga05p37_9830_c1 | nmdc:mga05p37_9830_c1_9270_10940 | 528 |
| 75 | 3300050515 | nmdc:mga0a205_116685_c1 | nmdc:mga0a205_116685_c1_625_2295 | 528 |
| 76 | 3300005365 | Ga0070688_100047274 | Ga0070688_1000472743 | 531 |
| 77 | 3300005536 | Ga0070697_100009337 | Ga0070697_1000093375 | 531 |
| 78 | 3300048917 | Ga0496114_0125212 | Ga0496114_0125212_270_1955 | 531 |
| 79 | 3300025912 | Ga0207707_10058403 | Ga0207707_100584032 | 532 |
| 80 | 3300005841 | Ga0068863_100000654 | Ga0068863_1000006548 | 533 |
| 81 | 3300025933 | Ga0207706_10138421 | Ga0207706_101384211 | 533 |
| 82 | 3300026088 | Ga0207641_10000693 | Ga0207641_100006935 | 533 |
| 83 | 3300005445 | Ga0070708_100028401 | Ga0070708_1000284012 | 535 |
| 84 | 3300005518 | Ga0070699_100000589 | Ga0070699_1000005899 | 535 |
| 85 | 3300005364 | Ga0070673_100142546 | Ga0070673_1001425462 | 537 |
| 86 | 3300005329 | Ga0070683_100028474 | Ga0070683_1000284741 | 538 |
| 87 | 3300005436 | Ga0070713_100001511 | Ga0070713_1000015119 | 538 |
| 88 | 3300005617 | Ga0068859_100022183 | Ga0068859_1000221836 | 538 |
| 89 | 3300006237 | Ga0097621_100024699 | Ga0097621_1000246995 | 538 |
| 90 | 3300006237 | Ga0097621_100111665 | Ga0097621_1001116652 | 538 |
| 91 | 3300006358 | Ga0068871_100003202 | Ga0068871_1000032024 | 538 |
| 92 | 3300006358 | Ga0068871_100180215 | Ga0068871_1001802151 | 538 |
| 93 | 3300006931 | Ga0097620_100022183 | Ga0097620_1000221836 | 538 |
| 94 | 3300009098 | Ga0105245_10037653 | Ga0105245_100376532 | 538 |
| 95 | 3300009101 | Ga0105247_10017009 | Ga0105247_100170094 | 538 |
| 96 | 3300009177 | Ga0105248_10008065 | Ga0105248_100080658 | 538 |
| 97 | 3300009177 | Ga0105248_10011180 | Ga0105248_100111809 | 538 |
| 98 | 3300009177 | Ga0105248_10142649 | Ga0105248_101426494 | 538 |
| 99 | 3300014968 | Ga0157379_10004341 | Ga0157379_1000434111 | 538 |
| 100 | 3300014968 | Ga0157379_10178767 | Ga0157379_101787671 | 538 |
| 101 | 3300014969 | Ga0157376_10013898 | Ga0157376_100138985 | 538 |
| 102 | 3300025922 | Ga0207646_10147427 | Ga0207646_101474272 | 538 |
| 103 | 3300025927 | Ga0207687_10106162 | Ga0207687_101061622 | 538 |
| 104 | 3300025941 | Ga0207711_10046692 | Ga0207711_100466923 | 538 |
| 105 | 3300026035 | Ga0207703_10033084 | Ga0207703_100330842 | 538 |
| 106 | 3300026121 | Ga0207683_10062565 | Ga0207683_100625652 | 538 |
| 107 | 3300046475 | Ga0495639_0052226 | Ga0495639_0052226_125_1801 | 538 |
| 108 | 3300046683 | Ga0495658_0068395 | Ga0495658_0068395_282_1964 | 538 |
| 109 | 3300048903 | Ga0496100_0003326 | Ga0496100_0003326_5870_7534 | 538 |
| 110 | 3300048904 | Ga0496101_0001009 | Ga0496101_0001009_9006_10670 | 538 |
| 111 | 3300048907 | Ga0496104_0009808 | Ga0496104_0009808_1010_2674 | 538 |
| 112 | 3300048907 | Ga0496104_0146114 | Ga0496104_0146114_489_2144 | 538 |
| 113 | 3300048917 | Ga0496114_0003198 | Ga0496114_0003198_4228_5892 | 538 |
| 114 | 3300050507 | nmdc:mga05p37_25089_c1 | nmdc:mga05p37_25089_c1_1707_3344 | 538 |
| 115 | 3300005290 | Ga0065712_10003987 | Ga0065712_100039872 | 539 |
| 116 | 3300005333 | Ga0070677_10013643 | Ga0070677_100136433 | 539 |
| 117 | 3300005339 | Ga0070660_100004068 | Ga0070660_1000040682 | 539 |
| 118 | 3300005353 | Ga0070669_100006790 | Ga0070669_1000067902 | 539 |
| 119 | 3300005354 | Ga0070675_100000035 | Ga0070675_1000000358 | 539 |
| 120 | 3300005356 | Ga0070674_100007518 | Ga0070674_1000075183 | 539 |
| 121 | 3300005434 | Ga0070709_10076182 | Ga0070709_100761822 | 539 |
| 122 | 3300005456 | Ga0070678_100057811 | Ga0070678_1000578112 | 539 |
| 123 | 3300005459 | Ga0068867_100055987 | Ga0068867_1000559874 | 539 |
| 124 | 3300005468 | Ga0070707_100048232 | Ga0070707_1000482324 | 539 |
| 125 | 3300005471 | Ga0070698_100089454 | Ga0070698_1000894542 | 539 |
| 126 | 3300005530 | Ga0070679_100124215 | Ga0070679_1001242152 | 539 |
| 127 | 3300005543 | Ga0070672_100119876 | Ga0070672_1001198762 | 539 |
| 128 | 3300005548 | Ga0070665_100005258 | Ga0070665_1000052585 | 539 |
| 129 | 3300005563 | Ga0068855_100274350 | Ga0068855_1002743502 | 539 |
| 130 | 3300005578 | Ga0068854_100003187 | Ga0068854_1000031876 | 539 |
| 131 | 3300005842 | Ga0068858_100001859 | Ga0068858_1000018593 | 539 |
| 132 | 3300005844 | Ga0068862_100005384 | Ga0068862_1000053845 | 539 |
| 133 | 3300006237 | Ga0097621_100005757 | Ga0097621_1000057575 | 539 |
| 134 | 3300006358 | Ga0068871_100003880 | Ga0068871_1000038809 | 539 |
| 135 | 3300006844 | Ga0075428_100217319 | Ga0075428_1002173192 | 539 |
| 136 | 3300006871 | Ga0075434_100071945 | Ga0075434_1000719453 | 539 |
| 137 | 3300006881 | Ga0068865_100006947 | Ga0068865_1000069475 | 539 |
| 138 | 3300007076 | Ga0075435_100003188 | Ga0075435_1000031885 | 539 |
| 139 | 3300007076 | Ga0075435_100014611 | Ga0075435_1000146115 | 539 |
| 140 | 3300009094 | Ga0111539_10095831 | Ga0111539_100958311 | 539 |
| 141 | 3300009098 | Ga0105245_10176148 | Ga0105245_101761482 | 539 |
| 142 | 3300009147 | Ga0114129_10016767 | Ga0114129_100167674 | 539 |
| 143 | 3300009147 | Ga0114129_10016913 | Ga0114129_100169135 | 539 |
| 144 | 3300009147 | Ga0114129_10105975 | Ga0114129_101059752 | 539 |
| 145 | 3300009147 | Ga0114129_10143172 | Ga0114129_101431723 | 539 |
| 146 | 3300009176 | Ga0105242_10008568 | Ga0105242_100085683 | 539 |
| 147 | 3300009177 | Ga0105248_10009269 | Ga0105248_100092698 | 539 |
| 148 | 3300014326 | Ga0157380_10080701 | Ga0157380_100807013 | 539 |
| 149 | 3300014745 | Ga0157377_10016654 | Ga0157377_100166543 | 539 |
| 150 | 3300025919 | Ga0207657_10040565 | Ga0207657_100405653 | 539 |
| 151 | 3300025921 | Ga0207652_10131498 | Ga0207652_101314981 | 539 |
| 152 | 3300025922 | Ga0207646_10035903 | Ga0207646_100359033 | 539 |
| 153 | 3300025923 | Ga0207681_10004571 | Ga0207681_100045713 | 539 |
| 154 | 3300025925 | Ga0207650_10135140 | Ga0207650_101351401 | 539 |
| 155 | 3300025926 | Ga0207659_10002714 | Ga0207659_100027143 | 539 |
| 156 | 3300025934 | Ga0207686_10043207 | Ga0207686_100432073 | 539 |
| 157 | 3300025938 | Ga0207704_10004236 | Ga0207704_100042365 | 539 |
| 158 | 3300025940 | Ga0207691_10048394 | Ga0207691_100483942 | 539 |
| 159 | 3300025945 | Ga0207679_10076807 | Ga0207679_100768072 | 539 |
| 160 | 3300026035 | Ga0207703_10140500 | Ga0207703_101405003 | 539 |
| 161 | 3300026089 | Ga0207648_10029745 | Ga0207648_100297454 | 539 |
| 162 | 3300026121 | Ga0207683_10021674 | Ga0207683_100216743 | 539 |
| 163 | 3300028379 | Ga0268266_10024028 | Ga0268266_100240283 | 539 |
| 164 | 3300028380 | Ga0268265_10004437 | Ga0268265_100044376 | 539 |
| 165 | 3300034818 | Ga0373950_0004305 | Ga0373950_0004305_261_1913 | 539 |
| 166 | 3300035090 | Ga0373949_0002765 | Ga0373949_0002765_502_2154 | 539 |
| 167 | 3300035091 | Ga0373951_0004015 | Ga0373951_0004015_1658_3310 | 539 |
| 168 | 3300035112 | Ga0373932_0001838 | Ga0373932_0001838_1552_3204 | 539 |
| 169 | 3300035114 | Ga0373939_0001094 | Ga0373939_0001094_2005_3657 | 539 |
| 170 | 3300035121 | Ga0373960_0000149 | Ga0373960_0000149_9181_10833 | 539 |
| 171 | 3300035207 | Ga0373942_0001584 | Ga0373942_0001584_3322_4974 | 539 |
| 172 | 3300035242 | Ga0373962_0010113 | Ga0373962_0010113_60_1736 | 539 |
| 173 | 3300046514 | Ga0495618_0109495 | Ga0495618_0109495_48_1706 | 539 |
| 174 | 3300047319 | Ga0495674_0141117 | Ga0495674_0141117_295_1953 | 539 |
| 175 | 3300047471 | Ga0495684_0052726 | Ga0495684_0052726_174_1832 | 539 |
| 176 | 3300048905 | Ga0496102_0049115 | Ga0496102_0049115_1677_3314 | 539 |
| 177 | 3300048911 | Ga0496108_0001495 | Ga0496108_0001495_993_2669 | 539 |
| 178 | 3300048917 | Ga0496114_0193015 | Ga0496114_0193015_18_1679 | 539 |
| 179 | 3300049571 | Ga0501034_0008073 | Ga0501034_0008073_3389_5029 | 539 |
| 180 | 3300049581 | Ga0501047_0055108 | Ga0501047_0055108_246_1886 | 539 |
| 181 | 3300049823 | Ga0501044_0003342 | Ga0501044_0003342_2373_4013 | 539 |
| 182 | 3300050507 | nmdc:mga05p37_26038_c2 | nmdc:mga05p37_26038_c2_2429_4081 | 539 |
| 183 | 3300050507 | nmdc:mga05p37_288303_c1 | nmdc:mga05p37_288303_c1_108_1769 | 539 |
| 184 | 3300050511 | nmdc:mga08y16_5818_c1 | nmdc:mga08y16_5818_c1_7472_9124 | 539 |
| 185 | 3300050512 | nmdc:mga0n895_96238_c1 | nmdc:mga0n895_96238_c1_1030_2667 | 539 |
| 186 | 3300050513 | nmdc:mga0rr50_1155_c1 | nmdc:mga0rr50_1155_c1_10943_12625 | 539 |
| 187 | 3300050515 | nmdc:mga0a205_68797_c1 | nmdc:mga0a205_68797_c1_60_1712 | 539 |
| 188 | 3300053085 | Ga0495619_0021488 | Ga0495619_0021488_2219_3877 | 539 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2xq2-assembly1.cif.gz_A | structure of the k294a mutant of vsglt | 0.8375 | 2 | 538 |
| 5nva-assembly1.cif.gz_A | substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site | 0.8314 | 2 | 536 |
| 2xq2-assembly1.cif.gz_B | structure of the k294a mutant of vsglt | 0.8149 | 30 | 538 |
| 5nva-assembly1.cif.gz_A | substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site | 0.8071 | 2 | 536 |
| 5nv9-assembly1.cif.gz_A | substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site | 0.806 | 2 | 536 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q9V9U2_57_565_1.20.1730.10 | Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter | 0.884 | 31 | 516 | 1.20.1730.10 |
| af_Q7K3Q2_41_585_1.20.1730.10 | Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter | 0.8516 | 39 | 516 | 1.20.1730.10 |
| af_Q9VBK1_152_658_1.20.1730.10 | Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter | 0.8353 | 33 | 521 | 1.20.1730.10 |
| af_Q9Y289_54_554_1.20.1730.10 | Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter | 0.8295 | 29 | 520 | 1.20.1730.10 |
| af_Q9W3R0_60_567_1.20.1730.10 | Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter | 0.8227 | 38 | 517 | 1.20.1730.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7X7XE31-F1-model_v4 | Sodium:solute symporter | 0.9262 | 1 | 539 |
GO:0005886
GO:0006814 GO:0015293 |
| AF-A0A7X7XE31-F1-model_v4 | Sodium:solute symporter | 0.9245 | 1 | 539 |
GO:0005886
GO:0006814 GO:0015293 |
| AF-A0A2V8ECI0-F1-model_v4 | Sodium:solute symporter | 0.9191 | 76 | 539 |
GO:0005886
GO:0006814 GO:0015075 GO:0015293 GO:0098660 |
| AF-A0A3D4M7J7-F1-model_v4 | Sodium:solute symporter | 0.9158 | 1 | 537 |
GO:0005886
GO:0006814 GO:0015293 |
| AF-A0A1V2C5I0-F1-model_v4 | Sodium:solute symporter | 0.9127 | 1 | 536 |
GO:0005886
GO:0006814 GO:0015293 |
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar