F290159

General Info

Members Datasets Scaffolds Average Seq Length
188 154 177 1060

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2831864461|2831865085
Length 1129
Sequence MLTKQSAPTTGSNSFTVTPARAGVIAFGLALQAAAFAADAPEAPAAASSPAAAASAPAAKWNVNQPPGEKKIANIDVRTGTWMSVDVSPDGKQIVFDLLGDLYVMPVGGGEAKALTHSIAWEMQPRFSPDGKQIAFVSDAGGGDNIWVMNADGSNARAISTEDFRLLNNPVWHPGGKYIAARKHFTGTRSLGSGEIWLYHVDGGKGQQLNEKPNWQKDLGEPALSPDGKFLYYSQDSTPGRQFEYNKDSTGEIFRIYRQDLTDGTNEPFVTGPGGAIRPTPSPDGKYLAFIRRLRDASGSRTTLFLKDLKTGREFPAWTGMERDLQESWSVHGVYPGIAWMPDSKQVVAWAQGKLWRIDPFKSSAAEIPFHVKDERQITPALRFAHEVAPATFESKMLRWVKVSPDGKRVVFSSAGYLYASELRDGQPVGEARRLTSQTERFEYFPAFSRDGRQLVYVSWNDADQGRVRVLDLAGGRDTVVTSEPGKYLSPAFSPDGRTVAYQKAKGGFLTSPWNSLEPGVYVAAVDGKGQPRRVTKDGEAPQFGADNDTLFVTRKQTTGEVDSNHQLVRLNLVERSEFAVAKSEFATRFTVSPDGQWLGFTERFHTYVTPLAPAGKLQTIGPKAEAMPVKKLDVNAGDDLQWSGDGKSQPYALHYALGNELFTVPLTQALQPGFKPAERGAPIKLTLTADKPKGRIAIVGARIVTMSASKPDEVIEDGAILVDGDRIAVIGPRASVSIPAGTETIQAAGKTVIPGLIDAHWHGTMAESEIVPQQSWINYASLAFGLTTLHDPSNRTSDIYTQSEMQRTGRVVGPRIFSTGTVLYGAKSDFSAVINSLDDAQTHLKRLKSAGAISVKSYNQPRRDQRQQVLEAARETGMMVVPEGGSLFQLNMSMVVDGHTGVEHALPVAKVYDDVKQLWPQTQVGYTPTLNVAYGGLDGEHYWYARTDVWRHPILSKFVPKAVLEPRSVRRETAPEEDFNVIQVARTATELQRAGVSVNIGAHGQREGLGAHWELWMMGMGGMTSLEAIRTATLNPARYLGLDKDIGSLEAGKLADMVILDGDVLKDLRQSDRISQVMQGGRVFDIPTMNEVWPAKKARKPFFFDGANASAPVDALAAGVEEGHGHGD

Samples

Sample ID Description Type Environment
1 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
2 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
3 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
4 2643221585 Pelomonas sp. Root662 Isolate Unclassified
5 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
6 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
7 2643221656 Pelomonas sp. Root405 Isolate Unclassified
8 2738541337 Pelomonas sp. BT06 Isolate Unclassified
9 2831864461 Roseateles noduli HZ7 Isolate Nodule
10 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
11 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
12 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
13 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
14 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
15 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
19 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
20 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
68 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
105 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
108 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
112 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
113 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
114 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
118 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
124 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
128 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
132 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
133 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
134 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
135 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
136 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
137 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
138 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
139 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
140 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
141 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
142 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
148 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
149 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
150 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.62
Metatranscriptomes 0
Isolates 6.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.43
Nodule 1.06
Rhizoplane 0
Rhizosphere 69.68
Stem 0
Stem Tuber 0
Unclassified 13.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1001158 3300002705 Bacteria 11806
2 JGI25154J39366_1002248 3300002738 Bacteria 5290
3 JGI25157J39369_1001127 3300002741 Bacteria 11806
4 rootL2_10003345 3300003322 Bacteria 38796
5 rootH1_10008298 3300003316 Bacteria 7116
6 rootH1_10008298 3300003323 Bacteria 13422
7 rootH1_10019593 3300003323 Bacteria 4490
8 Ga0055525_1000011 3300003759 Bacteria 503124
9 Ga0055526_1000758 3300003771 Bacteria 24157
10 Ga0055524_1001129 3300003775 Bacteria 16068
11 Ga0055531_10000025 3300003794 Bacteria 161475
12 Ga0065165_1000197 3300005262 Bacteria 104294
13 Ga0065165_1001296 3300005262 Bacteria 28110
14 Ga0070677_10000765 3300005333 Bacteria 10682
15 Ga0068868_100000894 3300005338 Bacteria 20277
16 Ga0070660_100015574 3300005339 Bacteria 5494
17 Ga0070669_100033285 3300005353 Bacteria 3727
18 Ga0070675_100000287 3300005354 Bacteria 33643
19 Ga0070675_100001002 3300005354 Bacteria 20262
20 Ga0070675_100013400 3300005354 Bacteria 6444
21 Ga0070671_100002056 3300005355 Bacteria 15513
22 Ga0070673_100031558 3300005364 Bacteria 3977
23 Ga0070667_100005884 3300005367 Bacteria 10216
24 Ga0070700_100000067 3300005441 Bacteria 74053
25 Ga0070678_100005845 3300005456 Bacteria 7157
26 Ga0070678_100010161 3300005456 Bacteria 5735
27 Ga0068867_100027038 3300005459 Bacteria 4122
28 Ga0070672_100002428 3300005543 Bacteria 11813
29 Ga0068855_100048956 3300005563 Bacteria 4987
30 Ga0068856_100006192 3300005614 Bacteria 11739
31 Ga0068852_100012562 3300005616 Bacteria 6433
32 Ga0068859_100001934 3300005617 Bacteria 21127
33 Ga0068864_100001274 3300005618 Bacteria 20945
34 Ga0068870_10001129 3300005840 Bacteria 10654
35 Ga0068863_100004625 3300005841 Bacteria 13557
36 Ga0068858_100022304 3300005842 Bacteria 5912
37 Ga0068860_100015039 3300005843 Bacteria 7563
38 Ga0081455_10011800 3300005937 Bacteria 8749
39 Ga0097621_100005449 3300006237 Bacteria 8962
40 Ga0075428_100000948 3300006844 Bacteria 30745
41 Ga0075428_100004549 3300006844 Bacteria 15335
42 Ga0075431_100000443 3300006847 Bacteria 33960
43 Ga0075431_100035137 3300006847 Bacteria 5161
44 Ga0075429_100008204 3300006880 Bacteria 9080
45 Ga0097620_100001934 3300006931 Bacteria 21127
46 Ga0099823_1014580 3300006944 Bacteria 7849
47 Ga0111539_10000013 3300009094 Bacteria 309567
48 Ga0111539_10001140 3300009094 Bacteria 35130
49 Ga0114129_10019883 3300009147 Bacteria 9556
50 Ga0105248_10053237 3300009177 Bacteria 4542
51 Ga0157319_1000035 3300012497 Bacteria 40594
52 Ga0157378_10021007 3300013297 Bacteria 5744
53 Ga0163162_10009730 3300013306 Bacteria 9357
54 Ga0157372_10023755 3300013307 Bacteria 6650
55 Ga0157375_10011616 3300013308 Bacteria 7781
56 Ga0157375_10036508 3300013308 Bacteria 4702
57 Ga0163163_10004721 3300014325 Bacteria 11674
58 Ga0163161_10025533 3300017792 Bacteria 4181
59 Ga0213872_10000027 3300021361 Bacteria 148884
60 Ga0213872_10000053 3300021361 Bacteria 103215
61 Ga0213872_10009149 3300021361 Bacteria 4762
62 Ga0209563_100005 3300025230 Bacteria 1774893
63 Ga0207427_101294 3300025231 Bacteria 9456
64 Ga0209646_1000157 3300025246 Bacteria 94054
65 Ga0209026_1000006 3300025250 Bacteria 677225
66 Ga0209677_100245 3300025253 Bacteria 37185
67 Ga0209759_1000194 3300025256 Bacteria 97047
68 Ga0209759_1000635 3300025256 Bacteria 32980
69 Ga0209759_1000895 3300025256 Bacteria 22272
70 Ga0209673_1001809 3300025273 Bacteria 17590
71 Ga0209564_1000003 3300025295 Bacteria 1585848
72 Ga0209050_1002733 3300025298 Bacteria 14227
73 Ga0209050_1003405 3300025298 Bacteria 11791
74 Ga0209256_1000398 3300025299 Bacteria 68796
75 Ga0209256_1002559 3300025299 Bacteria 14528
76 Ga0209051_1001098 3300025303 Bacteria 24909
77 Ga0209051_1001335 3300025303 Bacteria 21466
78 Ga0209257_1000032 3300025304 Bacteria 680354
79 Ga0209257_1000799 3300025304 Bacteria 45956
80 Ga0209257_1002218 3300025304 Bacteria 19980
81 Ga0207697_10003296 3300025315 Bacteria 8029
82 Ga0207682_10000838 3300025893 Bacteria 14223
83 Ga0207680_10003983 3300025903 Bacteria 6976
84 Ga0207645_10011154 3300025907 Bacteria 6147
85 Ga0207643_10003670 3300025908 Bacteria 8273
86 Ga0207657_10002333 3300025919 Bacteria 20574
87 Ga0207694_10025909 3300025924 Bacteria 4458
88 Ga0207659_10000041 3300025926 Bacteria 91047
89 Ga0207659_10001673 3300025926 Bacteria 13174
90 Ga0207644_10013519 3300025931 Bacteria 5445
91 Ga0207706_10014957 3300025933 Bacteria 7026
92 Ga0207691_10000298 3300025940 Bacteria 49191
93 Ga0207711_10018995 3300025941 Bacteria 5718
94 Ga0207667_10021823 3300025949 Bacteria 7086
95 Ga0207651_10014085 3300025960 Bacteria 4604
96 Ga0207640_10001763 3300025981 Bacteria 11620
97 Ga0207658_10005062 3300025986 Bacteria 9072
98 Ga0207703_10003054 3300026035 Bacteria 14158
99 Ga0207708_10000015 3300026075 Bacteria 194337
100 Ga0207702_10010797 3300026078 Bacteria 7621
101 Ga0207676_10000748 3300026095 Bacteria 25484
102 Ga0207675_100015460 3300026118 Bacteria 7119
103 Ga0207683_10005208 3300026121 Bacteria 11169
104 Ga0207683_10021233 3300026121 Bacteria 5555
105 Ga0207428_10000017 3300027907 Bacteria 309575
106 Ga0268266_10026576 3300028379 Bacteria 4926
107 Ga0265336_10000133 3300028666 Bacteria 53127
108 Ga0307515_10010370 3300028794 Bacteria 17854
109 Ga0307515_10011558 3300028794 Bacteria 16742
110 Ga0307515_10035003 3300028794 Bacteria 8190
111 Ga0265324_10003353 3300029957 Bacteria 7674
112 Ga0265339_10006666 3300031249 Bacteria 7550
113 Ga0265327_10000083 3300031251 Bacteria 204923
114 Ga0307408_100000655 3300031548 Bacteria 29072
115 Ga0307408_100013846 3300031548 Bacteria 5355
116 Ga0307514_10003857 3300031649 Bacteria 14090
117 Ga0307516_10000268 3300031730 Bacteria 66758
118 Ga0307516_10001560 3300031730 Bacteria 31520
119 Ga0307516_10001867 3300031730 Bacteria 28877
120 Ga0307414_10004496 3300032004 Bacteria 7580
121 Ga0373939_0000051 3300035114 Bacteria 41440
122 Ga0373960_0000920 3300035121 Bacteria 6263
123 Ga0395905_0010203 3300037471 Bacteria 9153
124 Ga0436361_0349482 3300039447 Bacteria 149171
125 Ga0436361_0513759 3300039447 Bacteria 41887
126 Ga0436361_1178743 3300039447 Bacteria 5253
127 Ga0450889_000409 3300042144 Bacteria 4802
128 Ga0466969_0000346 3300044656 Bacteria 25512
129 Ga0466961_0005234 3300044693 Bacteria 8168
130 Ga0466963_0008785 3300044694 Bacteria 6068
131 Ga0466963_0021564 3300044694 Bacteria 4066
132 Ga0453684_0034008 3300044712 Bacteria 7088
133 Ga0466957_0005145 3300044842 Bacteria 7312
134 Ga0495590_0007381 3300046457 Bacteria 4243
135 Ga0495638_0000005 3300046460 Bacteria 680627
136 Ga0495638_0000370 3300046460 Bacteria 55689
137 Ga0495650_0000179 3300046471 Bacteria 138628
138 Ga0495583_0000328 3300046506 Bacteria 75213
139 Ga0495606_0019235 3300046507 Bacteria 5089
140 Ga0495610_0002740 3300046512 Bacteria 14485
141 Ga0495631_0002479 3300046518 Bacteria 10388
142 Ga0495648_0000448 3300046524 Bacteria 44552
143 Ga0495667_0000796 3300046559 Bacteria 20294
144 Ga0495625_0009549 3300046660 Bacteria 8105
145 Ga0495649_0020091 3300046694 Bacteria 3747
146 Ga0495673_0000267 3300047469 Bacteria 72453
147 Ga0495686_0000857 3300047472 Bacteria 39041
148 Ga0496124_0003362 3300048927 Bacteria 19661
149 Ga0495678_000903 3300049459 Bacteria 26225
150 Ga0501298_000294 3300049521 Bacteria 6614
151 Ga0501202_001096 3300049652 Bacteria 4214
152 Ga0501206_000223 3300049653 Bacteria 6634
153 Ga0501211_000090 3300049658 Bacteria 6632
154 Ga0501217_000154 3300049661 Bacteria 9598
155 Ga0501222_000761 3300049662 Bacteria 4658
156 Ga0501222_001188 3300049662 Unclassified 3674
157 Ga0501223_003197 3300049663 Bacteria 3579
158 Ga0501261_001005 3300049690 Bacteria 3463
159 Ga0501221_000139 3300049704 Bacteria 9492
160 Ga0501221_000547 3300049704 Bacteria 5976
161 Ga0501225_0001266 3300049705 Bacteria 7845
162 Ga0501245_000184 3300049708 Bacteria 6913
163 nmdc:mga05p37_11733_c1 3300050507 Bacteria 9359
164 nmdc:mga05p37_72980_c1 3300050507 Unclassified 4223
165 nmdc:mga09592_11501_c1 3300050508 Bacteria 7202
166 nmdc:mga06r32_672_c1 3300050510 Bacteria 29819
167 nmdc:mga08y16_19_c1 3300050511 Bacteria 309575
168 nmdc:mga08y16_2294_c1 3300050511 Bacteria 19578
169 Ga0500635_0000298 3300053080 Bacteria 17594
170 Ga0500578_0000070 3300053086 Bacteria 113202
171 Ga0500644_0000082 3300053088 Bacteria 58141
172 Ga0500594_0000120 3300053118 Bacteria 21836
173 Ga0500559_0005958 3300053136 Bacteria 5541
174 Ga0500564_000096 3300053138 Bacteria 22511
175 Ga0500616_0000003 3300053153 Bacteria 1220687
176 Ga0500622_0001981 3300053156 Bacteria 15371
177 Ga0500622_0002288 3300053156 Bacteria 14033

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003323 rootH1_10008298 rootH1_100082988 842
2 3300049662 Ga0501222_001188 Ga0501222_001188_41_2836 865
3 3300049705 Ga0501225_0001266 Ga0501225_0001266_5013_7805 865
4 3300003323 rootH1_10019593 rootH1_100195934 911
5 3300035121 Ga0373960_0000920 Ga0373960_0000920_3245_6229 932
6 3300053156 Ga0500622_0001981 Ga0500622_0001981_9828_13055 933
7 3300031249 Ga0265339_10006666 Ga0265339_100066663 946
8 3300005937 Ga0081455_10011800 Ga0081455_100118003 961
9 3300006847 Ga0075431_100035137 Ga0075431_1000351372 963
10 3300046559 Ga0495667_0000796 Ga0495667_0000796_16888_20127 965
11 3300050507 nmdc:mga05p37_72980_c1 nmdc:mga05p37_72980_c1_257_3550 965
12 3300005333 Ga0070677_10000765 Ga0070677_100007657 976
13 3300005353 Ga0070669_100033285 Ga0070669_1000332852 976
14 3300005354 Ga0070675_100013400 Ga0070675_1000134004 976
15 3300005456 Ga0070678_100010161 Ga0070678_1000101613 976
16 3300005459 Ga0068867_100027038 Ga0068867_1000270382 976
17 3300005543 Ga0070672_100002428 Ga0070672_1000024287 976
18 3300005840 Ga0068870_10001129 Ga0068870_100011297 976
19 3300005843 Ga0068860_100015039 Ga0068860_1000150395 976
20 3300025893 Ga0207682_10000838 Ga0207682_100008383 976
21 3300025907 Ga0207645_10011154 Ga0207645_100111543 976
22 3300025908 Ga0207643_10003670 Ga0207643_100036706 976
23 3300025926 Ga0207659_10001673 Ga0207659_1000167311 976
24 3300025940 Ga0207691_10000298 Ga0207691_1000029816 976
25 3300026118 Ga0207675_100015460 Ga0207675_1000154604 976
26 3300026121 Ga0207683_10021233 Ga0207683_100212332 976
27 3300028379 Ga0268266_10026576 Ga0268266_100265763 976
28 3300028794 Ga0307515_10010370 Ga0307515_100103702 976
29 3300009094 Ga0111539_10000013 Ga0111539_10000013264 981
30 3300027907 Ga0207428_10000017 Ga0207428_100000177 981
31 3300050511 nmdc:mga08y16_19_c1 nmdc:mga08y16_19_c1_8103_11378 981
32 3300050511 nmdc:mga08y16_2294_c1 nmdc:mga08y16_2294_c1_9980_13189 981
33 3300003794 Ga0055531_10000025 Ga0055531_10000025118 982
34 3300013308 Ga0157375_10036508 Ga0157375_100365083 982
35 3300025298 Ga0209050_1003405 Ga0209050_10034052 982
36 3300025304 Ga0209257_1000032 Ga0209257_1000032201 982
37 3300031548 Ga0307408_100013846 Ga0307408_1000138462 982
38 3300025315 Ga0207697_10003296 Ga0207697_100032963 983
39 3300006844 Ga0075428_100000948 Ga0075428_10000094813 986
40 3300006847 Ga0075431_100000443 Ga0075431_10000044329 986
41 3300006880 Ga0075429_100008204 Ga0075429_1000082047 986
42 3300009094 Ga0111539_10001140 Ga0111539_1000114021 986
43 3300009147 Ga0114129_10019883 Ga0114129_100198838 986
44 3300031548 Ga0307408_100000655 Ga0307408_1000006559 986
45 3300050507 nmdc:mga05p37_11733_c1 nmdc:mga05p37_11733_c1_4976_8179 986
46 3300050508 nmdc:mga09592_11501_c1 nmdc:mga09592_11501_c1_2915_6118 986
47 3300050510 nmdc:mga06r32_672_c1 nmdc:mga06r32_672_c1_10938_14141 986
48 3300005262 Ga0065165_1001296 Ga0065165_100129620 987
49 3300005354 Ga0070675_100000287 Ga0070675_1000002878 988
50 3300013307 Ga0157372_10023755 Ga0157372_100237553 988
51 3300044712 Ga0453684_0034008 Ga0453684_0034008_1116_4409 988
52 3300025926 Ga0207659_10000041 Ga0207659_1000004158 990
53 3300013297 Ga0157378_10021007 Ga0157378_100210072 991
54 3300032004 Ga0307414_10004496 Ga0307414_100044965 991
55 3300042144 Ga0450889_000409 Ga0450889_000409_1509_4748 991
56 3300021361 Ga0213872_10000027 Ga0213872_1000002721 993
57 3300039447 Ga0436361_0349482 Ga0436361_0349482_125531_128797 993
58 3300048927 Ga0496124_0003362 Ga0496124_0003362_10745_14122 995
59 3300003771 Ga0055526_1000758 Ga0055526_10007583 996
60 3300025295 Ga0209564_1000003 Ga0209564_1000003944 996
61 3300028794 Ga0307515_10011558 Ga0307515_1001155811 996
62 3300046460 Ga0495638_0000370 Ga0495638_0000370_14102_17386 996
63 3300003322 rootL2_10003345 rootL2_1000334527 997
64 3300046512 Ga0495610_0002740 Ga0495610_0002740_189_3473 997
65 3300049459 Ga0495678_000903 Ga0495678_000903_7085_10369 999
66 3300053118 Ga0500594_0000120 Ga0500594_0000120_6061_9345 999
67 3300035114 Ga0373939_0000051 Ga0373939_0000051_28991_32242 1000
68 3300046524 Ga0495648_0000448 Ga0495648_0000448_35063_38365 1000
69 3300047469 Ga0495673_0000267 Ga0495673_0000267_30666_33956 1001
70 3300053088 Ga0500644_0000082 Ga0500644_0000082_10065_13355 1001
71 3300005262 Ga0065165_1000197 Ga0065165_100019728 1002
72 3300049658 Ga0501211_000090 Ga0501211_000090_130_3369 1002
73 3300046460 Ga0495638_0000005 Ga0495638_0000005_130389_133673 1003
74 3300049662 Ga0501222_000761 Ga0501222_000761_1326_4565 1003
75 3300049704 Ga0501221_000139 Ga0501221_000139_3199_6438 1003
76 3300053153 Ga0500616_0000003 Ga0500616_0000003_668098_671382 1003
77 3300025298 Ga0209050_1002733 Ga0209050_10027332 1004
78 3300049521 Ga0501298_000294 Ga0501298_000294_721_4002 1004
79 3300049652 Ga0501202_001096 Ga0501202_001096_70_3351 1004
80 3300049653 Ga0501206_000223 Ga0501206_000223_1675_4956 1004
81 3300049661 Ga0501217_000154 Ga0501217_000154_4443_7724 1004
82 3300049704 Ga0501221_000547 Ga0501221_000547_798_4079 1004
83 3300053086 Ga0500578_0000070 Ga0500578_0000070_15825_19103 1004
84 3300053138 Ga0500564_000096 Ga0500564_000096_18750_22040 1004
85 3300003775 Ga0055524_1001129 Ga0055524_10011292 1005
86 3300005441 Ga0070700_100000067 Ga0070700_10000006720 1005
87 3300025299 Ga0209256_1000398 Ga0209256_100039826 1005
88 3300026075 Ga0207708_10000015 Ga0207708_10000015109 1005
89 3300046457 Ga0495590_0007381 Ga0495590_0007381_858_4142 1005
90 3300046518 Ga0495631_0002479 Ga0495631_0002479_135_3419 1005
91 3300047472 Ga0495686_0000857 Ga0495686_0000857_16921_20205 1005
92 3300049663 Ga0501223_003197 Ga0501223_003197_207_3488 1005
93 3300049708 Ga0501245_000184 Ga0501245_000184_2291_5572 1005
94 3300053156 Ga0500622_0002288 Ga0500622_0002288_9289_12573 1005
95 3300037471 Ga0395905_0010203 Ga0395905_0010203_4416_7658 1006
96 3300049690 Ga0501261_001005 Ga0501261_001005_171_3413 1006
97 3300044694 Ga0466963_0008785 Ga0466963_0008785_946_4338 1010
98 iso_pu_bacteria 2643221544 2643745410 1010
99 3300028794 Ga0307515_10035003 Ga0307515_100350033 1011
100 iso_pu_bacteria 2643221639 2644221275 1011
101 iso_pu_bacteria 2643221646 2644257967 1011
102 iso_pu_bacteria 2738541337 2739057765 1011
103 iso_pu_bacteria 2902048731 2902048906 1011
104 3300031251 Ga0265327_10000083 Ga0265327_100000831 1012
105 3300046471 Ga0495650_0000179 Ga0495650_0000179_44797_48096 1012
106 iso_pu_bacteria 2643221585 2643935824 1012
107 iso_pu_bacteria 2643221656 2644317607 1012
108 3300025230 Ga0209563_100005 Ga0209563_100005444 1014
109 iso_pu_bacteria 2582581305 2585260505 1015
110 iso_pu_bacteria 2582581279 2585147901 1017
111 iso_pu_bacteria 2839989709 2839989748 1017
112 3300003759 Ga0055525_1000011 Ga0055525_1000011119 1018
113 3300012497 Ga0157319_1000035 Ga0157319_100003530 1018
114 3300025304 Ga0209257_1000799 Ga0209257_100079928 1018
115 3300021361 Ga0213872_10000053 Ga0213872_100000536 1019
116 3300039447 Ga0436361_0513759 Ga0436361_0513759_21446_24724 1019
117 3300025933 Ga0207706_10014957 Ga0207706_100149573 1020
118 3300006844 Ga0075428_100004549 Ga0075428_1000045498 1022
119 3300006944 Ga0099823_1014580 Ga0099823_10145805 1022
120 3300025273 Ga0209673_1001809 Ga0209673_100180910 1022
121 3300025299 Ga0209256_1002559 Ga0209256_10025595 1022
122 3300025303 Ga0209051_1001335 Ga0209051_10013357 1022
123 3300025304 Ga0209257_1002218 Ga0209257_10022183 1022
124 3300046506 Ga0495583_0000328 Ga0495583_0000328_31245_34553 1022
125 3300046507 Ga0495606_0019235 Ga0495606_0019235_1519_4827 1022
126 3300046660 Ga0495625_0009549 Ga0495625_0009549_4321_7629 1022
127 3300046694 Ga0495649_0020091 Ga0495649_0020091_319_3627 1022
128 3300031649 Ga0307514_10003857 Ga0307514_1000385710 1023
129 3300025256 Ga0209759_1000635 Ga0209759_100063518 1027
130 3300031730 Ga0307516_10000268 Ga0307516_1000026821 1027
131 iso_pu_bacteria 2831864461 2831865085 1027
132 iso_pu_bacteria 2886848708 2886852162 1027
133 3300025303 Ga0209051_1001098 Ga0209051_100109817 1028
134 3300031730 Ga0307516_10001867 Ga0307516_100018673 1029
135 3300025231 Ga0207427_101294 Ga0207427_1012942 1030
136 3300025256 Ga0209759_1000895 Ga0209759_100089515 1030
137 3300005338 Ga0068868_100000894 Ga0068868_1000008942 1031
138 3300005354 Ga0070675_100001002 Ga0070675_1000010029 1031
139 3300005355 Ga0070671_100002056 Ga0070671_1000020564 1031
140 3300005364 Ga0070673_100031558 Ga0070673_1000315581 1031
141 3300005367 Ga0070667_100005884 Ga0070667_1000058846 1031
142 3300005456 Ga0070678_100005845 Ga0070678_1000058452 1031
143 3300005616 Ga0068852_100012562 Ga0068852_1000125622 1031
144 3300005617 Ga0068859_100001934 Ga0068859_10000193415 1031
145 3300005618 Ga0068864_100001274 Ga0068864_10000127410 1031
146 3300005841 Ga0068863_100004625 Ga0068863_1000046252 1031
147 3300005842 Ga0068858_100022304 Ga0068858_1000223044 1031
148 3300006237 Ga0097621_100005449 Ga0097621_1000054494 1031
149 3300006931 Ga0097620_100001934 Ga0097620_10000193415 1031
150 3300009177 Ga0105248_10053237 Ga0105248_100532372 1031
151 3300013306 Ga0163162_10009730 Ga0163162_100097303 1031
152 3300013308 Ga0157375_10011616 Ga0157375_100116165 1031
153 3300014325 Ga0163163_10004721 Ga0163163_100047218 1031
154 3300017792 Ga0163161_10025533 Ga0163161_100255331 1031
155 3300025903 Ga0207680_10003983 Ga0207680_100039835 1031
156 3300025931 Ga0207644_10013519 Ga0207644_100135193 1031
157 3300025941 Ga0207711_10018995 Ga0207711_100189953 1031
158 3300025960 Ga0207651_10014085 Ga0207651_100140853 1031
159 3300025986 Ga0207658_10005062 Ga0207658_100050626 1031
160 3300026035 Ga0207703_10003054 Ga0207703_100030543 1031
161 3300026095 Ga0207676_10000748 Ga0207676_1000074811 1031
162 3300026121 Ga0207683_10005208 Ga0207683_100052084 1031
163 3300044694 Ga0466963_0021564 Ga0466963_0021564_222_3584 1031
164 3300053080 Ga0500635_0000298 Ga0500635_0000298_77_3373 1032
165 3300005339 Ga0070660_100015574 Ga0070660_1000155742 1033
166 3300005563 Ga0068855_100048956 Ga0068855_1000489562 1033
167 3300025919 Ga0207657_10002333 Ga0207657_100023333 1033
168 3300025949 Ga0207667_10021823 Ga0207667_100218237 1033
169 3300021361 Ga0213872_10009149 Ga0213872_100091492 1034
170 3300039447 Ga0436361_1178743 Ga0436361_1178743_1395_4766 1034
171 3300044693 Ga0466961_0005234 Ga0466961_0005234_2111_5473 1034
172 3300044842 Ga0466957_0005145 Ga0466957_0005145_1674_5036 1034
173 3300028666 Ga0265336_10000133 Ga0265336_1000013339 1035
174 3300029957 Ga0265324_10003353 Ga0265324_100033533 1035
175 3300044656 Ga0466969_0000346 Ga0466969_0000346_7169_10456 1035
176 3300002705 JGI25156J39149_1001158 JGI25156J39149_100115813 1037
177 3300002738 JGI25154J39366_1002248 JGI25154J39366_10022482 1037
178 3300002741 JGI25157J39369_1001127 JGI25157J39369_10011271 1037
179 3300005614 Ga0068856_100006192 Ga0068856_1000061921 1037
180 3300025246 Ga0209646_1000157 Ga0209646_10001578 1037
181 3300025250 Ga0209026_1000006 Ga0209026_100000670 1037
182 3300025253 Ga0209677_100245 Ga0209677_1002451 1037
183 3300025256 Ga0209759_1000194 Ga0209759_100019425 1037
184 3300025924 Ga0207694_10025909 Ga0207694_100259092 1037
185 3300025981 Ga0207640_10001763 Ga0207640_100017634 1037
186 3300026078 Ga0207702_10010797 Ga0207702_100107971 1037
187 3300031730 Ga0307516_10001560 Ga0307516_100015606 1037
188 3300053136 Ga0500559_0005958 Ga0500559_0005958_1410_4757 1037

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07676

PD40

WD40-like Beta Propeller Repeat

432

459

0.94

PF07676

PD40

WD40-like Beta Propeller Repeat

112

148

0.92

PF07676

PD40

WD40-like Beta Propeller Repeat

479

503

0.92

PF01979

Amidohydro_1

Amidohydrolase family

969

1095

0.88

PF07676

PD40

WD40-like Beta Propeller Repeat

267

305

0.85

PF07676

PD40

WD40-like Beta Propeller Repeat

212

242

0.84

PF07969

Amidohydro_3

Amidohydrolase family

1001

1085

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ivz-assembly1.cif.gz_A structure of tolb in complex with a peptide of the colicin e9 t- domain 0.7685 26 319
1ijq-assembly2.cif.gz_B crystal structure of the ldl receptor ywtd-egf domain pair 0.7574 46 318
3mtw-assembly1.cif.gz_A crystal structure of l-lysine, l-arginine carboxypeptidase cc2672 from caulobacter crescentus cb15 complexed with n-methyl phosphonate derivative of l-arginine 0.7282 625 990
3m0c-assembly1.cif.gz_C the x-ray crystal structure of pcsk9 in complex with the ldl receptor 0.7253 46 318
4whb-assembly2.cif.gz_A crystal structure of phenylurea hydrolase b 0.7216 626 1016
ID Description Score Start End Superfamily
4ub9B01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.9433 956 992 2.30.40.10
4whbE01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.9261 956 990 2.30.40.10
3be7A01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.9127 956 994 2.30.40.10
af_F1QIF4_3_113_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.773 31 111 2.130.10.10
af_Q0DGP5_451_595_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.7648 165 313 2.40.128.630
ID Description Score Start End GO Terms
AF-A0A3A8L186-F1-model_v4 Amidohydrolase 0.978 656 1018 GO:0016810
AF-X1TCE9-F1-model_v4 Amidohydrolase-related domain-containing protein 0.976 805 1013 GO:0016810
AF-A0A7C3GAS3-F1-model_v4 Amidohydrolase 0.9737 665 1010 GO:0016810
AF-A0A0S8DG37-F1-model_v4 Amidohydrolase 0.9715 239 1013 GO:0016810
AF-A0A3D0WFL2-F1-model_v4 deleted 0.9695 674 1011

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pLDDT pTM Quality
86.46 0.89 High
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Predicted Structure (AlphaFold2)

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