F290875

General Info

Members Datasets Scaffolds Average Seq Length
189 126 378 545

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10027293|Ga0105243_100272933
Length 564
Sequence MDERPRYYLTTAIAYANSKPGVHTLYEVIGADVIARWHRMKGDDTRFLTGTDEHSINIAQAAVDEDRPAREYVDEKVVLFKEAEEALSISPDRFIRTTDPDHVRAAQEMVRRAHANGDIYPGTYEGWYCPNEGFRNATDVVETARGTICPNHPDVPLQWLTEKNWFFRLSAYQERLEQYFADHPDFVQPEFRRNEMLGFIRGGLEDFSISRERTPGGWGIPFPIAENGETAQREDGSWDPEAGVIYVWYDALINYITGAGFPDDKTSFDRWWPADLHVIGKDIARFHTIFWPAMLWSAGLEPPRRVWVHGWLMAAGGERMSKSRGNFLDPTDFVAAFGRDGARYVVLREVPFDRDAEVSWDSFVRRYNADLANDFGNLLNRTVSMTKRYLDGVRPAPRLERDSPLAEGWNETVRSFMDAVESCRLHDALAGVWEFVGSANRVVDAEKPWELAKAWKAGDEEAGDRLRGVLGDLVEACRLIGLAVAPYMPLTAPRVLGQLGFEYGYGPDGNGETSILGELEWGARASEAGRVGTPEPLFPRLEAEAVGAATAAAETHDAETGSEA

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
74 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
75 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
76 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
80 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
81 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
84 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
87 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
90 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
96 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
100 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
111 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
112 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.53
Nodule 0
Rhizoplane 17.46
Rhizosphere 81.48
Stem 0
Stem Tuber 0
Unclassified 0.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_10027293 3300009148 Bacteria 4373
2 Ga0070676_10038751 3300005328 Bacteria 2754
3 Ga0070683_100048423 3300005329 Bacteria 3930
4 Ga0070670_100026743 3300005331 Bacteria 4963
5 Ga0070680_100000006 3300005336 Bacteria 113367
6 Ga0070680_100155747 3300005336 Unclassified 1919
7 Ga0068868_100017300 3300005338 Bacteria 5368
8 Ga0070689_100006055 3300005340 Bacteria 8333
9 Ga0070692_10054280 3300005345 Bacteria 2092
10 Ga0070675_100036114 3300005354 Bacteria 4019
11 Ga0070674_100001837 3300005356 Bacteria 11527
12 Ga0070674_100013901 3300005356 Bacteria 4990
13 Ga0070659_100007169 3300005366 Bacteria 8089
14 Ga0070701_10008304 3300005438 Bacteria 4485
15 Ga0070694_100020514 3300005444 Bacteria 4213
16 Ga0070708_100001913 3300005445 Bacteria 16027
17 Ga0070708_100003051 3300005445 Bacteria 13005
18 Ga0070708_100007868 3300005445 Bacteria 8534
19 Ga0070708_100086541 3300005445 Bacteria 2846
20 Ga0070678_100040609 3300005456 Bacteria 3293
21 Ga0070678_100073293 3300005456 Bacteria 2569
22 Ga0068867_100049554 3300005459 Bacteria 3092
23 Ga0070706_100002396 3300005467 Bacteria 18908
24 Ga0070706_100013943 3300005467 Bacteria 7424
25 Ga0070706_100016762 3300005467 Bacteria 6767
26 Ga0070706_100026587 3300005467 Bacteria 5325
27 Ga0070707_100001368 3300005468 Bacteria 23956
28 Ga0070707_100002720 3300005468 Bacteria 16817
29 Ga0070698_100016639 3300005471 Bacteria 7761
30 Ga0070698_100081046 3300005471 Bacteria 3240
31 Ga0070699_100021349 3300005518 Bacteria 5585
32 Ga0070699_100028769 3300005518 Bacteria 4792
33 Ga0070679_100015467 3300005530 Bacteria 7332
34 Ga0070684_100010873 3300005535 Bacteria 7230
35 Ga0070697_100027361 3300005536 Bacteria 4561
36 Ga0070697_100097322 3300005536 Bacteria 2442
37 Ga0068853_100053391 3300005539 Bacteria 3481
38 Ga0070672_100015843 3300005543 Bacteria 5381
39 Ga0070686_100012763 3300005544 Bacteria 4794
40 Ga0070686_100016174 3300005544 Bacteria 4336
41 Ga0070696_100037955 3300005546 Bacteria 3323
42 Ga0070704_100032094 3300005549 Bacteria 3539
43 Ga0070704_100056746 3300005549 Bacteria 2782
44 Ga0070704_100091290 3300005549 Bacteria 2271
45 Ga0068855_100064294 3300005563 Bacteria 4279
46 Ga0070702_100054437 3300005615 Bacteria 2302
47 Ga0068852_100034228 3300005616 Bacteria 4225
48 Ga0068859_100033370 3300005617 Bacteria 5168
49 Ga0068864_100035285 3300005618 Bacteria 4257
50 Ga0068864_100062852 3300005618 Bacteria 3217
51 Ga0068861_100106944 3300005719 Bacteria 2236
52 Ga0068860_100033002 3300005843 Bacteria 4970
53 Ga0081539_10050330 3300005985 Bacteria 2358
54 Ga0075365_10116060 3300006038 Bacteria 1843
55 Ga0097621_100030400 3300006237 Bacteria 4275
56 Ga0075428_100010448 3300006844 Bacteria 10311
57 Ga0097620_100033371 3300006931 Bacteria 5168
58 Ga0105245_10127320 3300009098 Bacteria 2385
59 Ga0114129_10010762 3300009147 Bacteria 13037
60 Ga0105243_10056315 3300009148 Bacteria 3126
61 Ga0105248_10294378 3300009177 Bacteria 1828
62 Ga0105238_10071754 3300009551 Bacteria 3460
63 Ga0105249_10015320 3300009553 Bacteria 6786
64 Ga0105249_10114778 3300009553 Bacteria 2550
65 Ga0105239_10031380 3300010375 Bacteria 5845
66 Ga0157378_10013500 3300013297 Bacteria 7143
67 Ga0157375_10051766 3300013308 Bacteria 4034
68 Ga0157375_10172554 3300013308 Bacteria 2310
69 Ga0157379_10059188 3300014968 Bacteria 3425
70 Ga0207643_10015872 3300025908 Bacteria 4102
71 Ga0207684_10002926 3300025910 Bacteria 16919
72 Ga0207684_10008276 3300025910 Bacteria 9258
73 Ga0207684_10022958 3300025910 Bacteria 5328
74 Ga0207684_10034045 3300025910 Bacteria 4331
75 Ga0207684_10055503 3300025910 Bacteria 3360
76 Ga0207660_10000002 3300025917 Bacteria 883566
77 Ga0207662_10027975 3300025918 Bacteria 3257
78 Ga0207657_10052100 3300025919 Bacteria 3554
79 Ga0207652_10011155 3300025921 Bacteria 7245
80 Ga0207646_10000393 3300025922 Bacteria 58925
81 Ga0207646_10062580 3300025922 Bacteria 3322
82 Ga0207690_10016135 3300025932 Bacteria 4541
83 Ga0207709_10004719 3300025935 Bacteria 7831
84 Ga0207709_10052075 3300025935 Bacteria 2512
85 Ga0207669_10001801 3300025937 Bacteria 9088
86 Ga0207704_10051597 3300025938 Bacteria 2488
87 Ga0207665_10116033 3300025939 Bacteria 1887
88 Ga0207667_10274697 3300025949 Bacteria 1723
89 Ga0207712_10086205 3300025961 Bacteria 2300
90 Ga0207708_10004998 3300026075 Bacteria 9769
91 Ga0207708_10030393 3300026075 Bacteria 4095
92 Ga0207702_10107972 3300026078 Bacteria 2469
93 Ga0207648_10010352 3300026089 Bacteria 8844
94 Ga0207676_10048180 3300026095 Bacteria 3307
95 Ga0207674_10030841 3300026116 Bacteria 5635
96 Ga0207683_10161890 3300026121 Bacteria 2023
97 Ga0268265_10170650 3300028380 Bacteria 1859
98 Ga0265337_1006517 3300028556 Bacteria 4493
99 Ga0265326_10006753 3300028558 Bacteria 3545
100 Ga0265319_1007866 3300028563 Bacteria 4738
101 Ga0265319_1017665 3300028563 Bacteria 2705
102 Ga0265334_10013998 3300028573 Bacteria 3349
103 Ga0265318_10004292 3300028577 Bacteria 6941
104 Ga0265318_10031919 3300028577 Bacteria 2041
105 Ga0265336_10006172 3300028666 Bacteria 4339
106 Ga0265338_10024989 3300028800 Bacteria 6082
107 Ga0265325_10005029 3300031241 Bacteria 8229
108 Ga0265329_10008408 3300031242 Bacteria 3915
109 Ga0265329_10009697 3300031242 Bacteria 3575
110 Ga0265340_10001279 3300031247 Bacteria 14428
111 Ga0265339_10010996 3300031249 Bacteria 5595
112 Ga0265316_10008651 3300031344 Bacteria 9423
113 Ga0265316_10066047 3300031344 Bacteria 2800
114 Ga0265342_10036920 3300031712 Bacteria 2982
115 Ga0316577_10007424 3300031733 Bacteria 5850
116 Ga0307415_100016342 3300032126 Bacteria 4421
117 Ga0316583_10015908 3300032133 Bacteria 2710
118 Ga0316574_0042402 3300035398 Bacteria 2807
119 Ga0436365_1389764 3300039437 Bacteria 4440
120 Ga0450910_000526 3300042147 Bacteria 4536
121 Ga0495651_0038255 3300046462 Bacteria 3736
122 Ga0495674_0115299 3300047319 Bacteria 2274
123 Ga0496100_0010376 3300048903 Bacteria 5270
124 Ga0496100_0049243 3300048903 Bacteria 2724
125 Ga0496102_0011081 3300048905 Bacteria 7765
126 Ga0496102_0044606 3300048905 Bacteria 4025
127 Ga0496102_0057567 3300048905 Bacteria 3550
128 Ga0496102_0123313 3300048905 Bacteria 2421
129 Ga0496104_0003314 3300048907 Bacteria 13898
130 Ga0496104_0008672 3300048907 Bacteria 9043
131 Ga0496104_0045436 3300048907 Bacteria 4131
132 Ga0496104_0083944 3300048907 Bacteria 3038
133 Ga0496105_0007346 3300048908 Bacteria 8519
134 Ga0496105_0039101 3300048908 Bacteria 3909
135 Ga0496105_0056556 3300048908 Bacteria 3238
136 Ga0496105_0096112 3300048908 Bacteria 2447
137 Ga0496107_0024406 3300048910 Bacteria 4277
138 Ga0496107_0028015 3300048910 Bacteria 4003
139 Ga0496108_0018018 3300048911 Bacteria 5777
140 Ga0496108_0028969 3300048911 Bacteria 4581
141 Ga0496108_0038504 3300048911 Bacteria 3983
142 Ga0496109_0008563 3300048912 Bacteria 8703
143 Ga0496109_0032852 3300048912 Bacteria 4667
144 Ga0496109_0075137 3300048912 Bacteria 3107
145 Ga0496109_0127591 3300048912 Bacteria 2372
146 Ga0496110_0011416 3300048913 Bacteria 7270
147 Ga0496110_0039200 3300048913 Bacteria 4125
148 Ga0496111_0021095 3300048914 Bacteria 4544
149 Ga0496111_0080609 3300048914 Bacteria 2375
150 Ga0496111_0091305 3300048914 Bacteria 2232
151 Ga0496112_0000007 3300048915 Bacteria 338850
152 Ga0496113_0046645 3300048916 Bacteria 3217
153 Ga0496114_0018157 3300048917 Bacteria 5682
154 Ga0496114_0055853 3300048917 Bacteria 3294
155 Ga0496115_0034083 3300048918 Bacteria 4023
156 Ga0501031_0033510 3300049568 Bacteria 3351
157 Ga0501036_0043904 3300049572 Bacteria 3785
158 Ga0501038_0048562 3300049574 Bacteria 3672
159 Ga0501040_0022349 3300049576 Bacteria 4232
160 Ga0501042_0052389 3300049578 Bacteria 2911
161 Ga0501067_0004561 3300049583 Bacteria 7661
162 Ga0501067_0037327 3300049583 Bacteria 2699
163 Ga0501067_0049416 3300049583 Bacteria 2331
164 Ga0501068_0028315 3300049584 Bacteria 3313
165 Ga0501068_0037395 3300049584 Bacteria 2906
166 Ga0501069_0012903 3300049585 Bacteria 4450
167 Ga0501069_0040334 3300049585 Bacteria 2580
168 Ga0501069_0044923 3300049585 Bacteria 2446
169 Ga0501071_0084110 3300049587 Bacteria 2331
170 Ga0501072_0041100 3300049588 Bacteria 3631
171 Ga0501072_0158631 3300049588 Bacteria 1804
172 Ga0501076_0023775 3300049592 Bacteria 4727
173 Ga0501077_0018650 3300049593 Bacteria 4388
174 Ga0501079_0077038 3300049741 Bacteria 2579
175 Ga0501080_0088230 3300049742 Bacteria 2882
176 Ga0501081_0042432 3300049743 Bacteria 3117
177 Ga0501081_0066675 3300049743 Bacteria 2504
178 Ga0501045_0009383 3300049824 Bacteria 6842
179 Ga0501045_0037620 3300049824 Bacteria 3518
180 Ga0501045_0053591 3300049824 Bacteria 2947
181 nmdc:mga05p37_2526_c1 3300050507 Bacteria 21268
182 nmdc:mga06r32_176507_c1 3300050510 Bacteria 2121
183 nmdc:mga08y16_74108_c1 3300050511 Bacteria 3547
184 Ga0495601_0052707 3300053077 Bacteria 2570
185 Ga0501082_0051455 3300060353 Bacteria 3550
186 Ga0501082_0135144 3300060353 Bacteria 2140
187 Ga0530510_0003338 3300061734 Bacteria 11041
188 Ga0530510_0009024 3300061734 Bacteria 6990
189 Ga0530510_0024202 3300061734 Bacteria 4332
190 Ga0105243_10027293
191 Ga0070676_10038751
192 Ga0070683_100048423
193 Ga0070670_100026743
194 Ga0070680_100000006
195 Ga0070680_100155747
196 Ga0068868_100017300
197 Ga0070689_100006055
198 Ga0070692_10054280
199 Ga0070675_100036114
200 Ga0070674_100001837
201 Ga0070674_100013901
202 Ga0070659_100007169
203 Ga0070701_10008304
204 Ga0070694_100020514
205 Ga0070708_100001913
206 Ga0070708_100003051
207 Ga0070708_100007868
208 Ga0070708_100086541
209 Ga0070678_100040609
210 Ga0070678_100073293
211 Ga0068867_100049554
212 Ga0070706_100002396
213 Ga0070706_100013943
214 Ga0070706_100016762
215 Ga0070706_100026587
216 Ga0070707_100001368
217 Ga0070707_100002720
218 Ga0070698_100016639
219 Ga0070698_100081046
220 Ga0070699_100021349
221 Ga0070699_100028769
222 Ga0070679_100015467
223 Ga0070684_100010873
224 Ga0070697_100027361
225 Ga0070697_100097322
226 Ga0068853_100053391
227 Ga0070672_100015843
228 Ga0070686_100012763
229 Ga0070686_100016174
230 Ga0070696_100037955
231 Ga0070704_100032094
232 Ga0070704_100056746
233 Ga0070704_100091290
234 Ga0068855_100064294
235 Ga0070702_100054437
236 Ga0068852_100034228
237 Ga0068859_100033370
238 Ga0068864_100035285
239 Ga0068864_100062852
240 Ga0068861_100106944
241 Ga0068860_100033002
242 Ga0081539_10050330
243 Ga0075365_10116060
244 Ga0097621_100030400
245 Ga0075428_100010448
246 Ga0097620_100033371
247 Ga0105245_10127320
248 Ga0114129_10010762
249 Ga0105243_10056315
250 Ga0105248_10294378
251 Ga0105238_10071754
252 Ga0105249_10015320
253 Ga0105249_10114778
254 Ga0105239_10031380
255 Ga0157378_10013500
256 Ga0157375_10051766
257 Ga0157375_10172554
258 Ga0157379_10059188
259 Ga0207643_10015872
260 Ga0207684_10002926
261 Ga0207684_10008276
262 Ga0207684_10022958
263 Ga0207684_10034045
264 Ga0207684_10055503
265 Ga0207660_10000002
266 Ga0207662_10027975
267 Ga0207657_10052100
268 Ga0207652_10011155
269 Ga0207646_10000393
270 Ga0207646_10062580
271 Ga0207690_10016135
272 Ga0207709_10004719
273 Ga0207709_10052075
274 Ga0207669_10001801
275 Ga0207704_10051597
276 Ga0207665_10116033
277 Ga0207667_10274697
278 Ga0207712_10086205
279 Ga0207708_10004998
280 Ga0207708_10030393
281 Ga0207702_10107972
282 Ga0207648_10010352
283 Ga0207676_10048180
284 Ga0207674_10030841
285 Ga0207683_10161890
286 Ga0268265_10170650
287 Ga0265337_1006517
288 Ga0265326_10006753
289 Ga0265319_1007866
290 Ga0265319_1017665
291 Ga0265334_10013998
292 Ga0265318_10004292
293 Ga0265318_10031919
294 Ga0265336_10006172
295 Ga0265338_10024989
296 Ga0265325_10005029
297 Ga0265329_10008408
298 Ga0265329_10009697
299 Ga0265340_10001279
300 Ga0265339_10010996
301 Ga0265316_10008651
302 Ga0265316_10066047
303 Ga0265342_10036920
304 Ga0316577_10007424
305 Ga0307415_100016342
306 Ga0316583_10015908
307 Ga0316574_0042402
308 Ga0436365_1389764
309 Ga0450910_000526
310 Ga0495651_0038255
311 Ga0495674_0115299
312 Ga0496100_0010376
313 Ga0496100_0049243
314 Ga0496102_0011081
315 Ga0496102_0044606
316 Ga0496102_0057567
317 Ga0496102_0123313
318 Ga0496104_0003314
319 Ga0496104_0008672
320 Ga0496104_0045436
321 Ga0496104_0083944
322 Ga0496105_0007346
323 Ga0496105_0039101
324 Ga0496105_0056556
325 Ga0496105_0096112
326 Ga0496107_0024406
327 Ga0496107_0028015
328 Ga0496108_0018018
329 Ga0496108_0028969
330 Ga0496108_0038504
331 Ga0496109_0008563
332 Ga0496109_0032852
333 Ga0496109_0075137
334 Ga0496109_0127591
335 Ga0496110_0011416
336 Ga0496110_0039200
337 Ga0496111_0021095
338 Ga0496111_0080609
339 Ga0496111_0091305
340 Ga0496112_0000007
341 Ga0496113_0046645
342 Ga0496114_0018157
343 Ga0496114_0055853
344 Ga0496115_0034083
345 Ga0501031_0033510
346 Ga0501036_0043904
347 Ga0501038_0048562
348 Ga0501040_0022349
349 Ga0501042_0052389
350 Ga0501067_0004561
351 Ga0501067_0037327
352 Ga0501067_0049416
353 Ga0501068_0028315
354 Ga0501068_0037395
355 Ga0501069_0012903
356 Ga0501069_0040334
357 Ga0501069_0044923
358 Ga0501071_0084110
359 Ga0501072_0041100
360 Ga0501072_0158631
361 Ga0501076_0023775
362 Ga0501077_0018650
363 Ga0501079_0077038
364 Ga0501080_0088230
365 Ga0501081_0042432
366 Ga0501081_0066675
367 Ga0501045_0009383
368 Ga0501045_0037620
369 Ga0501045_0053591
370 nmdc:mga05p37_2526_c1
371 nmdc:mga06r32_176507_c1
372 nmdc:mga08y16_74108_c1
373 Ga0495601_0052707
374 Ga0501082_0051455
375 Ga0501082_0135144
376 Ga0530510_0003338
377 Ga0530510_0009024
378 Ga0530510_0024202

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

7

152

0.94

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

135

383

0.88

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

225

359

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7wpt-assembly1.cif.gz_A methionyl-trna synthetase from staphylococcus aureus complexed with a fragment m2-80 and atp 0.948 2 539
5xet-assembly1.cif.gz_C crystal structure of mycobacterium tuberculosis methionyl-trna synthetase bound by methionyl-adenylate (met-amp) 0.9465 4 539
7wpt-assembly1.cif.gz_A methionyl-trna synthetase from staphylococcus aureus complexed with a fragment m2-80 and atp 0.9461 2 539
5xet-assembly1.cif.gz_C crystal structure of mycobacterium tuberculosis methionyl-trna synthetase bound by methionyl-adenylate (met-amp) 0.9447 4 539
7wpn-assembly1.cif.gz_A methionyl-trna synthetase from staphylococcus aureus complexed with a phenylbenzimidazole inhibitor and atp 0.9431 4 539
ID Description Score Start End Superfamily
4ppwA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9683 3 358 3.40.50.620
4ppwA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9639 3 358 3.40.50.620
2ct8B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9547 1 358 3.40.50.620
2ct8B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9506 1 358 3.40.50.620
2ct8B02 Mainly Beta;Beta Complex;Methionyl-trna Synthetase; domain 2; 0.9204 162 246 2.170.220.10
ID Description Score Start End GO Terms
AF-A0A522NFH6-F1-model_v4 Methionine--tRNA ligase 0.9817 4 350 GO:0004825
GO:0005524
GO:0006431
AF-A0A522NFH6-F1-model_v4 Methionine--tRNA ligase 0.9761 4 350 GO:0004825
GO:0005524
GO:0006431
AF-A0A0G1FJC4-F1-model_v4 Methionyl-tRNA synthetase 0.9722 4 124 GO:0004825
GO:0005524
GO:0006431
AF-A0A3D4FRP5-F1-model_v4 methionine--tRNA ligase (EC 6.1.1.10) 0.9704 5 480 GO:0004825
GO:0005524
GO:0006431
AF-A0A2T6EW57-F1-model_v4 deleted 0.9687 6 117

Map