F290959

General Info

Members Datasets Scaffolds Average Seq Length
189 137 378 311

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10005585|Ga0157378_100055859
Length 366
Sequence VAFALQKIGAIHRRGAHAYAQVIGRQRWRLHVTDPECRFVAELIENDSAHYVSECIVSGPMPDIISCRNLRKYFADVKAVDGLDLFVENGECFGLLGPNGAGKTTTIEILEGLTTPDSGDVEILGLTWKKNERELRERIGISLQETQLSEKLTVFETLRLFRSFYRDGADPEDLLRELSLDEKHDARVGKLSGGQKQRLAVACALVGNPDVLFLDEPTTGLDPQSRLQLWDIVQRFRQKGGTVLLTTHYMEEAERLCDRVAIVDHGHLIALGTPADLIAKLEARNVIEFTSEPQLEQAVVESIASCAGVTPHNEGWLLRVHSLAEAVPQLIATVEKQGAKLVSLSTHEATLEDLFVSLTGRELRDA

Samples

Sample ID Description Type Environment
1 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
48 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
96 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
97 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
98 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
102 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
103 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
104 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
105 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
106 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
107 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
108 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
115 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
116 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
120 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
128 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
129 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
133 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
136 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
137 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.94
Nodule 0
Rhizoplane 2.12
Rhizosphere 87.3
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157378_10005585 3300013297 Bacteria 11015
2 Ga0070676_10077873 3300005328 Bacteria 2005
3 Ga0070683_100000086 3300005329 Bacteria 62329
4 Ga0070670_100000049 3300005331 Bacteria 132683
5 Ga0070670_100013009 3300005331 Bacteria 7128
6 Ga0068869_100043271 3300005334 Bacteria 3234
7 Ga0068869_100100133 3300005334 Bacteria 2191
8 Ga0070682_100000159 3300005337 Bacteria 51678
9 Ga0068868_100000395 3300005338 Bacteria 29642
10 Ga0068868_100016931 3300005338 Bacteria 5423
11 Ga0070689_100049705 3300005340 Bacteria 3238
12 Ga0070687_100055145 3300005343 Bacteria 2074
13 Ga0070661_100374239 3300005344 Bacteria 1122
14 Ga0070692_10018395 3300005345 Bacteria 3360
15 Ga0070667_100012435 3300005367 Bacteria 7044
16 Ga0070667_100117072 3300005367 Bacteria 2314
17 Ga0070703_10023292 3300005406 Bacteria 1823
18 Ga0070713_100011505 3300005436 Bacteria 6446
19 Ga0070701_10000054 3300005438 Bacteria 29623
20 Ga0070700_100000086 3300005441 Bacteria 62330
21 Ga0070708_100018313 3300005445 Bacteria 5862
22 Ga0070663_100134899 3300005455 Bacteria 1878
23 Ga0070678_100156062 3300005456 Bacteria 1844
24 Ga0070662_100188105 3300005457 Bacteria 1631
25 Ga0068867_100093613 3300005459 Bacteria 2284
26 Ga0070706_100002647 3300005467 Bacteria 17924
27 Ga0070706_100113072 3300005467 Bacteria 2528
28 Ga0070706_100440199 3300005467 Bacteria 1213
29 Ga0070707_100007097 3300005468 Bacteria 10386
30 Ga0070707_100231152 3300005468 Bacteria 1800
31 Ga0070698_100221719 3300005471 Bacteria 1824
32 Ga0070699_100033052 3300005518 Bacteria 4469
33 Ga0070699_100043192 3300005518 Bacteria 3902
34 Ga0070684_100000371 3300005535 Bacteria 31003
35 Ga0070684_100201205 3300005535 Bacteria 1814
36 Ga0070672_100000062 3300005543 Bacteria 49596
37 Ga0070686_100242083 3300005544 Bacteria 1314
38 Ga0070693_100084234 3300005547 Bacteria 1902
39 Ga0070664_100015538 3300005564 Bacteria 6229
40 Ga0068857_100012562 3300005577 Bacteria 7376
41 Ga0068854_100004094 3300005578 Bacteria 9162
42 Ga0070702_100051697 3300005615 Bacteria 2353
43 Ga0068864_100000007 3300005618 Bacteria 392187
44 Ga0068861_100096153 3300005719 Bacteria 2347
45 Ga0068858_100000528 3300005842 Bacteria 40088
46 Ga0068862_100001348 3300005844 Bacteria 22814
47 Ga0070717_10000114 3300006028 Bacteria 62795
48 Ga0075368_10039155 3300006042 Bacteria 1857
49 Ga0075364_10100403 3300006051 Bacteria 1926
50 Ga0075367_10080929 3300006178 Bacteria 1965
51 Ga0075367_10110985 3300006178 Bacteria 1683
52 Ga0075367_10130482 3300006178 Bacteria 1553
53 Ga0075367_10224218 3300006178 Bacteria 1177
54 Ga0075366_10090725 3300006195 Bacteria 1830
55 Ga0097621_100256443 3300006237 Bacteria 1533
56 Ga0075370_10036459 3300006353 Bacteria 2762
57 Ga0068865_100211481 3300006881 Bacteria 1512
58 Ga0075435_100000169 3300007076 Bacteria 38167
59 Ga0075435_100021594 3300007076 Bacteria 4954
60 Ga0099794_10014965 3300007265 Bacteria 3413
61 Ga0105244_10070409 3300009036 Bacteria 1745
62 Ga0111539_10000033 3300009094 Bacteria 154510
63 Ga0105245_10000014 3300009098 Bacteria 230684
64 Ga0105245_10003887 3300009098 Bacteria 13287
65 Ga0105245_10021502 3300009098 Bacteria 5661
66 Ga0114129_10083583 3300009147 Bacteria 4434
67 Ga0114129_10243167 3300009147 Bacteria 2419
68 Ga0105248_10065478 3300009177 Bacteria 4080
69 Ga0105248_10114030 3300009177 Bacteria 3048
70 Ga0105238_10000129 3300009551 Bacteria 83108
71 Ga0105239_10109648 3300010375 Bacteria 3059
72 Ga0105239_10262190 3300010375 Bacteria 1942
73 Ga0157369_10000989 3300013105 Bacteria 35947
74 Ga0157374_10000020 3300013296 Bacteria 276902
75 Ga0157374_10353206 3300013296 Bacteria 1461
76 Ga0157378_10012568 3300013297 Bacteria 7411
77 Ga0157378_10095214 3300013297 Bacteria 2712
78 Ga0157378_10482080 3300013297 Bacteria 1236
79 Ga0157375_10000003 3300013308 Bacteria 476325
80 Ga0157375_10000043 3300013308 Bacteria 157537
81 Ga0157375_10000238 3300013308 Bacteria 51057
82 Ga0157380_10602679 3300014326 Bacteria 1087
83 Ga0157377_10000005 3300014745 Bacteria 426955
84 Ga0157377_10000116 3300014745 Bacteria 54885
85 Ga0157379_10378633 3300014968 Bacteria 1298
86 Ga0157379_10554529 3300014968 Bacteria 1069
87 Ga0157376_10000015 3300014969 Bacteria 275370
88 Ga0157376_10074580 3300014969 Bacteria 2892
89 Ga0157376_10221167 3300014969 Bacteria 1754
90 Ga0213876_10000067 3300021384 Bacteria 126770
91 Ga0213876_10002506 3300021384 Bacteria 10776
92 Ga0207655_1054911 3300025728 Bacteria 1580
93 Ga0207684_10128711 3300025910 Bacteria 2173
94 Ga0207662_10120136 3300025918 Bacteria 1648
95 Ga0207662_10150059 3300025918 Bacteria 1482
96 Ga0207649_10036748 3300025920 Bacteria 2953
97 Ga0207646_10002410 3300025922 Bacteria 22066
98 Ga0207646_10049761 3300025922 Bacteria 3752
99 Ga0207646_10223196 3300025922 Bacteria 1702
100 Ga0207646_10228420 3300025922 Bacteria 1681
101 Ga0207694_10000002 3300025924 Bacteria 1165763
102 Ga0207694_10000003 3300025924 Bacteria 1165533
103 Ga0207650_10000093 3300025925 Bacteria 116247
104 Ga0207650_10020527 3300025925 Bacteria 4659
105 Ga0207659_10000002 3300025926 Bacteria 619441
106 Ga0207687_10000010 3300025927 Bacteria 403706
107 Ga0207687_10001032 3300025927 Bacteria 18937
108 Ga0207670_10001054 3300025936 Bacteria 14538
109 Ga0207704_10173475 3300025938 Bacteria 1550
110 Ga0207691_10001589 3300025940 Bacteria 22551
111 Ga0207691_10035334 3300025940 Bacteria 4640
112 Ga0207691_10118624 3300025940 Bacteria 2347
113 Ga0207691_10210990 3300025940 Bacteria 1686
114 Ga0207689_10009178 3300025942 Bacteria 8558
115 Ga0207689_10038847 3300025942 Bacteria 3941
116 Ga0207689_10120919 3300025942 Bacteria 2154
117 Ga0207661_10000002 3300025944 Bacteria 816104
118 Ga0207679_10017265 3300025945 Bacteria 4810
119 Ga0207668_10319475 3300025972 Bacteria 1288
120 Ga0207640_10020348 3300025981 Bacteria 3939
121 Ga0207658_10010295 3300025986 Bacteria 6356
122 Ga0207677_10000001 3300026023 Bacteria 534789
123 Ga0207677_10000298 3300026023 Bacteria 37065
124 Ga0207703_10001750 3300026035 Bacteria 19418
125 Ga0207678_10122775 3300026067 Bacteria 2216
126 Ga0207708_10000035 3300026075 Bacteria 140227
127 Ga0207648_10294041 3300026089 Bacteria 1455
128 Ga0207676_10000015 3300026095 Bacteria 329100
129 Ga0207674_10037507 3300026116 Bacteria 5040
130 Ga0207675_100038762 3300026118 Bacteria 4447
131 Ga0207675_100049254 3300026118 Bacteria 3933
132 Ga0207683_10009301 3300026121 Bacteria 8373
133 Ga0209813_10011360 3300027866 Bacteria 2326
134 Ga0207428_10000001 3300027907 Bacteria 1034622
135 Ga0268265_10000549 3300028380 Bacteria 38204
136 Ga0268264_10014975 3300028381 Bacteria 6365
137 Ga0268264_10084941 3300028381 Bacteria 2715
138 Ga0307511_10000097 3300030521 Bacteria 76020
139 Ga0373929_0000005 3300035085 Bacteria 354831
140 Ga0373951_0001056 3300035091 Bacteria 7400
141 Ga0373932_0001225 3300035112 Bacteria 7282
142 Ga0373957_0053269 3300035120 Bacteria 1552
143 Ga0373935_0006028 3300035692 Bacteria 7201
144 Ga0436365_0409696 3300039437 Bacteria 73546
145 Ga0436365_1683600 3300039437 Bacteria 11753
146 Ga0451802_1038016 3300041460 Bacteria 1204
147 Ga0450920_004006 3300042122 Bacteria 2574
148 Ga0450920_017324 3300042122 Bacteria 1377
149 Ga0450923_024728 3300042125 Bacteria 1193
150 Ga0450894_004299 3300042131 Bacteria 1852
151 Ga0450895_002833 3300042132 Bacteria 1314
152 Ga0450896_002508 3300042133 Bacteria 2376
153 Ga0450908_000854 3300042184 Bacteria 5875
154 Ga0450918_005901 3300042531 Bacteria 2193
155 Ga0451577_0000001 3300042876 Bacteria 2461803
156 Ga0451577_0372676 3300042876 Bacteria 1295
157 Ga0466964_0106696 3300044706 Bacteria 1243
158 Ga0453684_0000650 3300044712 Bacteria 125139
159 Ga0451576_0355980 3300045051 Bacteria 1533
160 Ga0495630_0367048 3300046517 Bacteria 1102
161 Ga0495663_0020406 3300046525 Bacteria 1902
162 Ga0495587_0000369 3300046536 Bacteria 32101
163 Ga0495609_0030991 3300046538 Bacteria 2433
164 Ga0495658_0145520 3300046683 Bacteria 1452
165 Ga0495613_0105628 3300046689 Bacteria 2033
166 Ga0495600_0134941 3300046809 Bacteria 1603
167 Ga0495679_012126 3300047446 Bacteria 3295
168 Ga0495602_0013962 3300048088 Bacteria 8179
169 Ga0496104_0015414 3300048907 Bacteria 6922
170 Ga0496114_0000002 3300048917 Bacteria 688100
171 Ga0496114_0005215 3300048917 Bacteria 10150
172 Ga0501080_0224900 3300049742 Bacteria 1716
173 Ga0501081_0124953 3300049743 Bacteria 1835
174 nmdc:mga00v17_39952_c1 3300050491 Bacteria 2812
175 nmdc:mga00v17_91324_c1 3300050491 Bacteria 1913
176 nmdc:mga0k408_175744_c1 3300050493 Bacteria 1277
177 nmdc:mga0k408_20716_c1 3300050493 Bacteria 3688
178 nmdc:mga06z11_95647_c1 3300050494 Bacteria 1621
179 nmdc:mga07m45_221832_c1 3300050496 Bacteria 1100
180 nmdc:mga05p37_206151_c1 3300050507 Bacteria 2378
181 nmdc:mga05p37_565353_c1 3300050507 Bacteria 1291
182 nmdc:mga08y16_1_c1 3300050511 Bacteria 1034622
183 nmdc:mga0rr50_15969_c1 3300050513 Bacteria 4972
184 nmdc:mga0rr50_44_c1 3300050513 Bacteria 75700
185 nmdc:mga08x19_163_c2 3300050514 Bacteria 22232
186 Ga0495601_0010437 3300053077 Bacteria 5527
187 Ga0495612_0035408 3300053078 Bacteria 2024
188 Ga0495655_0000030 3300053083 Bacteria 30595
189 Ga0495619_0030401 3300053085 Bacteria 3497
190 Ga0157378_10005585
191 Ga0070676_10077873
192 Ga0070683_100000086
193 Ga0070670_100000049
194 Ga0070670_100013009
195 Ga0068869_100043271
196 Ga0068869_100100133
197 Ga0070682_100000159
198 Ga0068868_100000395
199 Ga0068868_100016931
200 Ga0070689_100049705
201 Ga0070687_100055145
202 Ga0070661_100374239
203 Ga0070692_10018395
204 Ga0070667_100012435
205 Ga0070667_100117072
206 Ga0070703_10023292
207 Ga0070713_100011505
208 Ga0070701_10000054
209 Ga0070700_100000086
210 Ga0070708_100018313
211 Ga0070663_100134899
212 Ga0070678_100156062
213 Ga0070662_100188105
214 Ga0068867_100093613
215 Ga0070706_100002647
216 Ga0070706_100113072
217 Ga0070706_100440199
218 Ga0070707_100007097
219 Ga0070707_100231152
220 Ga0070698_100221719
221 Ga0070699_100033052
222 Ga0070699_100043192
223 Ga0070684_100000371
224 Ga0070684_100201205
225 Ga0070672_100000062
226 Ga0070686_100242083
227 Ga0070693_100084234
228 Ga0070664_100015538
229 Ga0068857_100012562
230 Ga0068854_100004094
231 Ga0070702_100051697
232 Ga0068864_100000007
233 Ga0068861_100096153
234 Ga0068858_100000528
235 Ga0068862_100001348
236 Ga0070717_10000114
237 Ga0075368_10039155
238 Ga0075364_10100403
239 Ga0075367_10080929
240 Ga0075367_10110985
241 Ga0075367_10130482
242 Ga0075367_10224218
243 Ga0075366_10090725
244 Ga0097621_100256443
245 Ga0075370_10036459
246 Ga0068865_100211481
247 Ga0075435_100000169
248 Ga0075435_100021594
249 Ga0099794_10014965
250 Ga0105244_10070409
251 Ga0111539_10000033
252 Ga0105245_10000014
253 Ga0105245_10003887
254 Ga0105245_10021502
255 Ga0114129_10083583
256 Ga0114129_10243167
257 Ga0105248_10065478
258 Ga0105248_10114030
259 Ga0105238_10000129
260 Ga0105239_10109648
261 Ga0105239_10262190
262 Ga0157369_10000989
263 Ga0157374_10000020
264 Ga0157374_10353206
265 Ga0157378_10012568
266 Ga0157378_10095214
267 Ga0157378_10482080
268 Ga0157375_10000003
269 Ga0157375_10000043
270 Ga0157375_10000238
271 Ga0157380_10602679
272 Ga0157377_10000005
273 Ga0157377_10000116
274 Ga0157379_10378633
275 Ga0157379_10554529
276 Ga0157376_10000015
277 Ga0157376_10074580
278 Ga0157376_10221167
279 Ga0213876_10000067
280 Ga0213876_10002506
281 Ga0207655_1054911
282 Ga0207684_10128711
283 Ga0207662_10120136
284 Ga0207662_10150059
285 Ga0207649_10036748
286 Ga0207646_10002410
287 Ga0207646_10049761
288 Ga0207646_10223196
289 Ga0207646_10228420
290 Ga0207694_10000002
291 Ga0207694_10000003
292 Ga0207650_10000093
293 Ga0207650_10020527
294 Ga0207659_10000002
295 Ga0207687_10000010
296 Ga0207687_10001032
297 Ga0207670_10001054
298 Ga0207704_10173475
299 Ga0207691_10001589
300 Ga0207691_10035334
301 Ga0207691_10118624
302 Ga0207691_10210990
303 Ga0207689_10009178
304 Ga0207689_10038847
305 Ga0207689_10120919
306 Ga0207661_10000002
307 Ga0207679_10017265
308 Ga0207668_10319475
309 Ga0207640_10020348
310 Ga0207658_10010295
311 Ga0207677_10000001
312 Ga0207677_10000298
313 Ga0207703_10001750
314 Ga0207678_10122775
315 Ga0207708_10000035
316 Ga0207648_10294041
317 Ga0207676_10000015
318 Ga0207674_10037507
319 Ga0207675_100038762
320 Ga0207675_100049254
321 Ga0207683_10009301
322 Ga0209813_10011360
323 Ga0207428_10000001
324 Ga0268265_10000549
325 Ga0268264_10014975
326 Ga0268264_10084941
327 Ga0307511_10000097
328 Ga0373929_0000005
329 Ga0373951_0001056
330 Ga0373932_0001225
331 Ga0373957_0053269
332 Ga0373935_0006028
333 Ga0436365_0409696
334 Ga0436365_1683600
335 Ga0451802_1038016
336 Ga0450920_004006
337 Ga0450920_017324
338 Ga0450923_024728
339 Ga0450894_004299
340 Ga0450895_002833
341 Ga0450896_002508
342 Ga0450908_000854
343 Ga0450918_005901
344 Ga0451577_0000001
345 Ga0451577_0372676
346 Ga0466964_0106696
347 Ga0453684_0000650
348 Ga0451576_0355980
349 Ga0495630_0367048
350 Ga0495663_0020406
351 Ga0495587_0000369
352 Ga0495609_0030991
353 Ga0495658_0145520
354 Ga0495613_0105628
355 Ga0495600_0134941
356 Ga0495679_012126
357 Ga0495602_0013962
358 Ga0496104_0015414
359 Ga0496114_0000002
360 Ga0496114_0005215
361 Ga0501080_0224900
362 Ga0501081_0124953
363 nmdc:mga00v17_39952_c1
364 nmdc:mga00v17_91324_c1
365 nmdc:mga0k408_175744_c1
366 nmdc:mga0k408_20716_c1
367 nmdc:mga06z11_95647_c1
368 nmdc:mga07m45_221832_c1
369 nmdc:mga05p37_206151_c1
370 nmdc:mga05p37_565353_c1
371 nmdc:mga08y16_1_c1
372 nmdc:mga0rr50_15969_c1
373 nmdc:mga0rr50_44_c1
374 nmdc:mga08x19_163_c2
375 Ga0495601_0010437
376 Ga0495612_0035408
377 Ga0495655_0000030
378 Ga0495619_0030401

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

80

219

0.98

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

136

252

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4p33-assembly1.cif.gz_A crystal structure of e. coli lptb-e163q in complex with atp-sodium 0.9204 6 220
7ch0-assembly1.cif.gz_E the overall structure of the mlafedb complex in atp-bound eqclose conformation (mutation of e170q on mlaf) 0.9146 3 219
6xgz-assembly3.cif.gz_E crystal structure of e. coli mlafb abc transport subunits in the monomeric state 0.9136 1 219
8eop-assembly1.cif.gz_A cryo-em structure of nanodisc reconstituted human abca7 eq mutant in atp bound closed state 0.9129 5 219
6xgz-assembly2.cif.gz_C crystal structure of e. coli mlafb abc transport subunits in the monomeric state 0.9096 1 221
ID Description Score Start End Superfamily
af_O53149_2_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9641 4 224 3.40.50.300
af_O33189_10_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9517 4 225 3.40.50.300
af_D3ZCF8_477_737_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9393 2 224 3.40.50.300
af_Q9VRG3_1356_1574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9385 2 210 3.40.50.300
af_P0A9U1_321_563_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9358 4 222 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A832TF76-F1-model_v4 ABC transporter ATP-binding protein 0.942 4 215 GO:0005524
GO:0016887
AF-A0A520NVZ7-F1-model_v4 ABC transporter ATP-binding protein 0.9362 1 224 GO:0005524
GO:0016887
AF-A0A2U3CB58-F1-model_v4 ABC transporter domain-containing protein 0.9361 2 222 GO:0005524
GO:0016887
AF-A0A0D1P4L1-F1-model_v4 deleted 0.9345 2 224
AF-A0A2D4CKI9-F1-model_v4 deleted 0.934 2 224

Map