F291371

General Info

Members Datasets Scaffolds Average Seq Length
189 136 366 254

Family's Representative Sequence

Representative Sequence 3300046455|Ga0495603_0001815|Ga0495603_0001815_989_1765
Length 258
Sequence MLIGAGLALLLLAVAATAGAVRKIEKVHLRAGDIVIDGFGGFRPETLPKNKDAPIELYGGGKITTISGELPPVLKELNFEFDKHGSVVTKGLAVCTRKKLVATDVPAARRACGDAIVGEGKGTAVVAFPEQGLIRATSPLTIFNGPKKHGNNTVFVHAYLDDPVGPVTFIVPVEIKRISNGIYGYRTEAEIPKIAGGYGHPVSGELTIGRKWTFKGKKYSYVNARCANGRLQGRGEFTFKDTPPTILRGTFLRPCKSK

Samples

Sample ID Description Type Environment
1 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
77 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
80 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
83 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
86 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
87 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
99 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
100 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
101 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
104 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
111 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
131 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
135 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
136 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.94
Metatranscriptomes 1.06
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.59
Nodule 0
Rhizoplane 15.87
Rhizosphere 82.01
Stem 0
Stem Tuber 0
Unclassified 5.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495603_0001815 3300046455 Bacteria 12603
2 JGI25406J46586_10037718 3300003203 Unclassified 1739
3 Ga0058861_11842417 3300004800 Bacteria 1054
4 Ga0070683_100009946 3300005329 Bacteria 8157
5 Ga0070670_100033462 3300005331 Bacteria 4427
6 Ga0070670_100086304 3300005331 Bacteria 2697
7 Ga0070677_10000030 3300005333 Bacteria 41834
8 Ga0070666_10008571 3300005335 Bacteria 6353
9 Ga0070680_100068910 3300005336 Bacteria 2904
10 Ga0070682_100000057 3300005337 Bacteria 108832
11 Ga0068868_100001251 3300005338 Bacteria 17460
12 Ga0070668_100009244 3300005347 Bacteria 7309
13 Ga0070667_100033898 3300005367 Bacteria 4271
14 Ga0070701_10062200 3300005438 Bacteria 1971
15 Ga0070711_100018630 3300005439 Bacteria 4436
16 Ga0070694_100219529 3300005444 Unclassified 1425
17 Ga0070662_100000005 3300005457 Bacteria 183056
18 Ga0070679_100000342 3300005530 Bacteria 39556
19 Ga0070684_100003262 3300005535 Bacteria 12148
20 Ga0068853_100022487 3300005539 Bacteria 5267
21 Ga0068853_100099606 3300005539 Unclassified 2568
22 Ga0070665_100000159 3300005548 Bacteria 122613
23 Ga0068856_100001306 3300005614 Bacteria 26220
24 Ga0068856_100010757 3300005614 Bacteria 8887
25 Ga0068852_100000013 3300005616 Bacteria 139537
26 Ga0068852_100048338 3300005616 Bacteria 3634
27 Ga0068851_10011397 3300005834 Bacteria 4168
28 Ga0068863_100000032 3300005841 Bacteria 172402
29 Ga0068863_100002285 3300005841 Bacteria 19049
30 Ga0068858_100000049 3300005842 Bacteria 122693
31 Ga0068862_100004408 3300005844 Bacteria 11884
32 Ga0081539_10000674 3300005985 Bacteria 68446
33 Ga0075430_100487973 3300006846 Bacteria 1017
34 Ga0068865_100000001 3300006881 Bacteria 288199
35 Ga0105240_10682808 3300009093 Unclassified 1123
36 Ga0105245_10001248 3300009098 Bacteria 22969
37 Ga0105245_10001267 3300009098 Bacteria 22830
38 Ga0105242_10000017 3300009176 Bacteria 122190
39 Ga0105242_10465279 3300009176 Unclassified 1195
40 Ga0105248_10000089 3300009177 Bacteria 102101
41 Ga0105238_10000028 3300009551 Bacteria 188361
42 Ga0105249_10000192 3300009553 Bacteria 69997
43 Ga0105249_10002963 3300009553 Bacteria 14650
44 Ga0105249_10066076 3300009553 Bacteria 3329
45 Ga0157371_10001481 3300013102 Bacteria 24297
46 Ga0157370_10010153 3300013104 Bacteria 9945
47 Ga0157370_10367178 3300013104 Bacteria 1326
48 Ga0157374_10003124 3300013296 Bacteria 13911
49 Ga0157374_10413568 3300013296 Unclassified 1347
50 Ga0163162_10326952 3300013306 Bacteria 1666
51 Ga0157380_10000196 3300014326 Bacteria 35418
52 Ga0157379_10022133 3300014968 Bacteria 5634
53 Ga0157376_10472317 3300014969 Bacteria 1227
54 Ga0163161_10000073 3300017792 Bacteria 102053
55 Ga0206352_11000346 3300020078 Unclassified 1125
56 Ga0207656_10006592 3300025321 Bacteria 4187
57 Ga0207682_10000003 3300025893 Bacteria 128548
58 Ga0207680_10001891 3300025903 Bacteria 9820
59 Ga0207705_10037950 3300025909 Bacteria 3448
60 Ga0207695_10346531 3300025913 Unclassified 1373
61 Ga0207663_10004952 3300025916 Bacteria 6668
62 Ga0207660_10052438 3300025917 Bacteria 2904
63 Ga0207652_10000351 3300025921 Bacteria 47656
64 Ga0207694_10000008 3300025924 Bacteria 484902
65 Ga0207650_10040084 3300025925 Bacteria 3426
66 Ga0207650_10063855 3300025925 Bacteria 2754
67 Ga0207687_10000012 3300025927 Bacteria 370729
68 Ga0207687_10000613 3300025927 Bacteria 24053
69 Ga0207664_10841115 3300025929 Bacteria 825
70 Ga0207706_10000006 3300025933 Bacteria 216994
71 Ga0207686_10000016 3300025934 Bacteria 198779
72 Ga0207686_10000029 3300025934 Bacteria 160239
73 Ga0207704_10000004 3300025938 Bacteria 239295
74 Ga0207704_10121585 3300025938 Bacteria 1788
75 Ga0207711_10000083 3300025941 Bacteria 102109
76 Ga0207712_10000003 3300025961 Bacteria 615314
77 Ga0207712_10022144 3300025961 Bacteria 4182
78 Ga0207640_10022282 3300025981 Bacteria 3789
79 Ga0207658_10635797 3300025986 Unclassified 961
80 Ga0207677_10000902 3300026023 Bacteria 16642
81 Ga0207703_10000153 3300026035 Bacteria 79352
82 Ga0207639_10004949 3300026041 Bacteria 8975
83 Ga0207639_10061341 3300026041 Bacteria 2904
84 Ga0207702_10002888 3300026078 Bacteria 16065
85 Ga0207702_10004180 3300026078 Bacteria 12922
86 Ga0207641_10000071 3300026088 Bacteria 151812
87 Ga0207641_10002067 3300026088 Bacteria 19059
88 Ga0207698_10000002 3300026142 Bacteria 404991
89 Ga0268266_10000023 3300028379 Bacteria 501899
90 Ga0268265_10003142 3300028380 Bacteria 12034
91 Ga0265326_10071816 3300028558 Unclassified 978
92 Ga0265319_1000044 3300028563 Bacteria 103641
93 Ga0265338_10000297 3300028800 Bacteria 89764
94 Ga0265325_10011850 3300031241 Bacteria 5000
95 Ga0265331_10018274 3300031250 Bacteria 3642
96 Ga0451853_1938796 3300041512 Bacteria 7830
97 Ga0466963_0002561 3300044694 Bacteria 10194
98 Ga0466963_0004779 3300044694 Bacteria 7901
99 Ga0466957_0038980 3300044842 Bacteria 2865
100 Ga0495592_0042795 3300046454 Bacteria 3391
101 Ga0495592_0065026 3300046454 Bacteria 2671
102 Ga0495603_0007847 3300046455 Bacteria 6434
103 Ga0495629_0000619 3300046459 Bacteria 28922
104 Ga0495638_0010895 3300046460 Bacteria 6287
105 Ga0495641_0060488 3300046461 Unclassified 1711
106 Ga0495641_0093020 3300046461 Viruses 1347
107 Ga0495653_0068622 3300046463 Bacteria 2659
108 Ga0495653_0258096 3300046463 Bacteria 1153
109 Ga0495662_0000121 3300046476 Bacteria 28985
110 Ga0495608_0001675 3300046511 Bacteria 15943
111 Ga0495608_0411552 3300046511 Bacteria 826
112 Ga0495610_0137969 3300046512 Bacteria 1052
113 Ga0495618_0000003 3300046514 Bacteria 256269
114 Ga0495620_0000446 3300046515 Bacteria 27496
115 Ga0495628_0000649 3300046516 Bacteria 31834
116 Ga0495628_0033804 3300046516 Bacteria 4118
117 Ga0495628_0041712 3300046516 Bacteria 3663
118 Ga0495630_0049887 3300046517 Bacteria 3132
119 Ga0495652_0000533 3300046529 Bacteria 44395
120 Ga0495652_0119308 3300046529 Bacteria 2107
121 Ga0495640_0008498 3300046533 Bacteria 8049
122 Ga0495586_0000384 3300046535 Bacteria 27060
123 Ga0495587_0000446 3300046536 Bacteria 28865
124 Ga0495587_0196841 3300046536 Bacteria 1140
125 Ga0495625_0000020 3300046660 Bacteria 290440
126 Ga0495635_0000009 3300046663 Bacteria 259024
127 Ga0495599_0004757 3300046678 Bacteria 8071
128 Ga0495647_0000014 3300046681 Bacteria 87792
129 Ga0495658_0036634 3300046683 Bacteria 2707
130 Ga0495669_0000074 3300046684 Bacteria 66373
131 Ga0495613_0000003 3300046689 Bacteria 248826
132 Ga0495624_0000002 3300046690 Bacteria 189957
133 Ga0495624_0000140 3300046690 Bacteria 51928
134 Ga0495624_0032935 3300046690 Bacteria 3358
135 Ga0495649_0003855 3300046694 Bacteria 9932
136 Ga0495600_0001098 3300046809 Bacteria 14740
137 Ga0495604_0000084 3300047317 Bacteria 82199
138 Ga0495672_0092558 3300047320 Bacteria 1657
139 Ga0495672_0151969 3300047320 Bacteria 1200
140 Ga0495676_0000480 3300047321 Bacteria 32772
141 Ga0495676_0002121 3300047321 Bacteria 17511
142 Ga0495680_0000255 3300047322 Bacteria 58745
143 Ga0495679_008100 3300047446 Bacteria 4303
144 Ga0495593_0058500 3300047673 Bacteria 2022
145 Ga0495593_0067179 3300047673 Bacteria 1867
146 Ga0495602_0001188 3300048088 Bacteria 25566
147 Ga0495602_0035692 3300048088 Bacteria 4634
148 Ga0496100_0000016 3300048903 Bacteria 166058
149 Ga0496100_0000035 3300048903 Bacteria 97592
150 Ga0496101_0000038 3300048904 Bacteria 166058
151 Ga0496101_0000087 3300048904 Bacteria 101601
152 Ga0496102_0000054 3300048905 Bacteria 175565
153 Ga0496103_0000178 3300048906 Bacteria 64984
154 Ga0496104_0000003 3300048907 Bacteria 669219
155 Ga0496105_0000008 3300048908 Bacteria 335652
156 Ga0496106_0000013 3300048909 Bacteria 202263
157 Ga0496106_0000068 3300048909 Bacteria 83053
158 Ga0496106_0000136 3300048909 Bacteria 55465
159 Ga0496107_0000003 3300048910 Bacteria 304038
160 Ga0496107_0000018 3300048910 Bacteria 158433
161 Ga0496107_0042066 3300048910 Bacteria 3282
162 Ga0496108_0000002 3300048911 Bacteria 700890
163 Ga0496109_0000001 3300048912 Bacteria 700852
164 Ga0496109_0000033 3300048912 Bacteria 160496
165 Ga0496110_0052598 3300048913 Bacteria 3579
166 Ga0496110_0321375 3300048913 Bacteria 1410
167 Ga0496111_0288921 3300048914 Bacteria 1216
168 Ga0496111_0555984 3300048914 Bacteria 842
169 Ga0496112_0000002 3300048915 Bacteria 782039
170 Ga0496114_0000003 3300048917 Bacteria 630981
171 Ga0496114_0017899 3300048917 Bacteria 5726
172 Ga0496115_0000031 3300048918 Bacteria 138258
173 Ga0496115_0000074 3300048918 Bacteria 90267
174 Ga0501042_0029745 3300049578 Bacteria 3853
175 Ga0501076_0477209 3300049592 Bacteria 1027
176 Ga0495601_0000080 3300053077 Bacteria 51518
177 Ga0495601_0020866 3300053077 Bacteria 4005
178 Ga0495655_0000003 3300053083 Bacteria 303053
179 Ga0495595_0000069 3300053084 Bacteria 50835
180 Ga0495619_0000749 3300053085 Bacteria 21180
181 Ga0500566_0001971 3300053094 Bacteria 12098
182 Ga0500641_0002523 3300053096 Bacteria 6470
183 Ga0500628_000002 3300053129 Bacteria 357687
184 Ga0495603_0001815
185 JGI25406J46586_10037718
186 Ga0058861_11842417
187 Ga0070683_100009946
188 Ga0070670_100033462
189 Ga0070670_100086304
190 Ga0070677_10000030
191 Ga0070666_10008571
192 Ga0070680_100068910
193 Ga0070682_100000057
194 Ga0068868_100001251
195 Ga0070668_100009244
196 Ga0070667_100033898
197 Ga0070701_10062200
198 Ga0070711_100018630
199 Ga0070694_100219529
200 Ga0070662_100000005
201 Ga0070679_100000342
202 Ga0070684_100003262
203 Ga0068853_100022487
204 Ga0068853_100099606
205 Ga0070665_100000159
206 Ga0068856_100001306
207 Ga0068856_100010757
208 Ga0068852_100000013
209 Ga0068852_100048338
210 Ga0068851_10011397
211 Ga0068863_100000032
212 Ga0068863_100002285
213 Ga0068858_100000049
214 Ga0068862_100004408
215 Ga0081539_10000674
216 Ga0075430_100487973
217 Ga0068865_100000001
218 Ga0105240_10682808
219 Ga0105245_10001248
220 Ga0105245_10001267
221 Ga0105242_10000017
222 Ga0105242_10465279
223 Ga0105248_10000089
224 Ga0105238_10000028
225 Ga0105249_10000192
226 Ga0105249_10002963
227 Ga0105249_10066076
228 Ga0157371_10001481
229 Ga0157370_10010153
230 Ga0157370_10367178
231 Ga0157374_10003124
232 Ga0157374_10413568
233 Ga0163162_10326952
234 Ga0157380_10000196
235 Ga0157379_10022133
236 Ga0157376_10472317
237 Ga0163161_10000073
238 Ga0206352_11000346
239 Ga0207656_10006592
240 Ga0207682_10000003
241 Ga0207680_10001891
242 Ga0207705_10037950
243 Ga0207695_10346531
244 Ga0207663_10004952
245 Ga0207660_10052438
246 Ga0207652_10000351
247 Ga0207694_10000008
248 Ga0207650_10040084
249 Ga0207650_10063855
250 Ga0207687_10000012
251 Ga0207687_10000613
252 Ga0207664_10841115
253 Ga0207706_10000006
254 Ga0207686_10000016
255 Ga0207686_10000029
256 Ga0207704_10000004
257 Ga0207704_10121585
258 Ga0207711_10000083
259 Ga0207712_10000003
260 Ga0207712_10022144
261 Ga0207640_10022282
262 Ga0207658_10635797
263 Ga0207677_10000902
264 Ga0207703_10000153
265 Ga0207639_10004949
266 Ga0207639_10061341
267 Ga0207702_10002888
268 Ga0207702_10004180
269 Ga0207641_10000071
270 Ga0207641_10002067
271 Ga0207698_10000002
272 Ga0268266_10000023
273 Ga0268265_10003142
274 Ga0265326_10071816
275 Ga0265319_1000044
276 Ga0265338_10000297
277 Ga0265325_10011850
278 Ga0265331_10018274
279 Ga0451853_1938796
280 Ga0466963_0002561
281 Ga0466963_0004779
282 Ga0466957_0038980
283 Ga0495592_0042795
284 Ga0495592_0065026
285 Ga0495603_0007847
286 Ga0495629_0000619
287 Ga0495638_0010895
288 Ga0495641_0060488
289 Ga0495641_0093020
290 Ga0495653_0068622
291 Ga0495653_0258096
292 Ga0495662_0000121
293 Ga0495608_0001675
294 Ga0495608_0411552
295 Ga0495610_0137969
296 Ga0495618_0000003
297 Ga0495620_0000446
298 Ga0495628_0000649
299 Ga0495628_0033804
300 Ga0495628_0041712
301 Ga0495630_0049887
302 Ga0495652_0000533
303 Ga0495652_0119308
304 Ga0495640_0008498
305 Ga0495586_0000384
306 Ga0495587_0000446
307 Ga0495587_0196841
308 Ga0495625_0000020
309 Ga0495635_0000009
310 Ga0495599_0004757
311 Ga0495647_0000014
312 Ga0495658_0036634
313 Ga0495669_0000074
314 Ga0495613_0000003
315 Ga0495624_0000002
316 Ga0495624_0000140
317 Ga0495624_0032935
318 Ga0495649_0003855
319 Ga0495600_0001098
320 Ga0495604_0000084
321 Ga0495672_0092558
322 Ga0495672_0151969
323 Ga0495676_0000480
324 Ga0495676_0002121
325 Ga0495680_0000255
326 Ga0495679_008100
327 Ga0495593_0058500
328 Ga0495593_0067179
329 Ga0495602_0001188
330 Ga0495602_0035692
331 Ga0496100_0000016
332 Ga0496100_0000035
333 Ga0496101_0000038
334 Ga0496101_0000087
335 Ga0496102_0000054
336 Ga0496103_0000178
337 Ga0496104_0000003
338 Ga0496105_0000008
339 Ga0496106_0000013
340 Ga0496106_0000068
341 Ga0496106_0000136
342 Ga0496107_0000003
343 Ga0496107_0000018
344 Ga0496107_0042066
345 Ga0496108_0000002
346 Ga0496109_0000001
347 Ga0496109_0000033
348 Ga0496110_0052598
349 Ga0496110_0321375
350 Ga0496111_0288921
351 Ga0496111_0555984
352 Ga0496112_0000002
353 Ga0496114_0000003
354 Ga0496114_0017899
355 Ga0496115_0000031
356 Ga0496115_0000074
357 Ga0501042_0029745
358 Ga0501076_0477209
359 Ga0495601_0000080
360 Ga0495601_0020866
361 Ga0495655_0000003
362 Ga0495595_0000069
363 Ga0495619_0000749
364 Ga0500566_0001971
365 Ga0500641_0002523
366 Ga0500628_000002

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fcs-assembly2.cif.gz_C structure of complete ectodomain of integrin aiibb3 0.6166 32 254
2p3p-assembly1.cif.gz_A structure of a domain of an uncharacterized protein pg_1388 from porphyromonas gingivalis w83 0.571 134 178
6mvl-assembly1.cif.gz_A crystal structure of vista bound to a ph-selective antibody fab fragment 0.5274 207 254
7wwo-assembly1.cif.gz_A dimer form of hypothetical protein ttha1873 from thermus thermophilus 0.4927 33 253
4lba-assembly1.cif.gz_A crystal structure of a conjugative transposon lipoprotein (bacegg_03088) from bacteroides eggerthii dsm 20697 at 1.70 a resolution 0.4909 39 248
ID Description Score Start End Superfamily
5jenC01 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Fervidobacterium nodosum Rt17-B1 like 0.7028 139 174 3.30.565.40
2kpnA01 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.6522 207 254 2.60.40.10
af_Q19194_105_203_2.60.40.60 Mainly Beta;Sandwich;Immunoglobulin-like;Cadherins 0.6419 216 253 2.60.40.60
4oqeB02 Mainly Beta;Single Sheet;S-adenosyl-L-methionine-dependent methyltransferases;CAC2371-like domains 0.6253 19 70 2.20.130.10
3fcsA03 Mainly Beta;Sandwich;Immunoglobulin-like;ntegrin, alpha v. Chain A, domain 3 0.6143 29 254 2.60.40.1510
ID Description Score Start End GO Terms
AF-A0A1M3BPG7-F1-model_v4 Uncharacterized protein 0.9794 16 254
AF-A0A1M3BPG7-F1-model_v4 Uncharacterized protein 0.9714 16 254
AF-A0A1M3BPN8-F1-model_v4 EF-hand domain-containing protein 0.9562 16 254
AF-A0A1M3BHU4-F1-model_v4 Uncharacterized protein 0.9556 28 254
AF-A0A838VAF8-F1-model_v4 Uncharacterized protein 0.9538 18 254

Map