F291841

General Info

Members Datasets Scaffolds Average Seq Length
190 117 172 307

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10017121|rootH1_100171213
Length 303
Sequence MKKIKILLVLLSVVLLGACTKDDDLSDLKDIPGLGGDTWEKTALDKWLYDSLVVPYNIEAKYKWDQFEFDLNKTLVPPMERMVQPALESIKKVWIDTYIQEAGASFFKRNSPKFLILCGSASWNVDNGTITLGTAEGGRKVVIYAINDFRIKGMANYQPADSATLKQIFHVIEHEFGHILHQTILYPPAFKTISAGHYSGNWNNISESEAHANGFISAYAMSGFDDDFVEMISLMLTDGRAGFERLIAGIPEGSSSTGVTKAQAVSALRQKEAMVVAYFKTAWNIDFYSLQAKKRKAVEALIY

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
3 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
4 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
5 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
6 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
7 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
8 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
9 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
10 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
11 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
12 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
13 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
14 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
17 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
21 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
22 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
23 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
24 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
25 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
26 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
27 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
42 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
43 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
45 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
46 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
66 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
67 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
68 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
69 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
70 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
71 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
72 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
73 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
74 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
77 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
78 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
79 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
80 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
81 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
82 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
83 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
84 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
85 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
86 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
87 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
90 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
91 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
96 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
97 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
98 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
99 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
100 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
101 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
102 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
103 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
104 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
105 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
106 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
107 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
108 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
109 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
110 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
111 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
112 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
113 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
114 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
115 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
116 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
117 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.05
Metatranscriptomes 0
Isolates 8.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 41.58
Nodule 0
Rhizoplane 1.58
Rhizosphere 35.26
Stem 0
Stem Tuber 0
Unclassified 21.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10004520 3300001989 Bacteria 5320
2 JGI25154J39366_1000005 3300002738 Bacteria 345115
3 JGI25154J39366_1000019 3300002738 Bacteria 234419
4 JGI25158J39367_1002660 3300002739 Bacteria 2864
5 JGI25153J46596_10012923 3300003215 Bacteria 3564
6 rootH1_10017121 3300003316 Bacteria 12818
7 rootH1_10068424 3300003316 Bacteria 4204
8 rootH1_10123530 3300003316 Bacteria 1439
9 rootH1_10173133 3300003316 Bacteria 1414
10 rootH2_10049911 3300003320 Bacteria 12272
11 rootH2_10155869 3300003320 Bacteria 4270
12 rootL2_10122535 3300003322 Bacteria 1966
13 rootH1_10000662 3300003323 Bacteria 213765
14 rootH1_10168945 3300003323 Bacteria 5615
15 JGI25160J50197_1001760 3300003354 Bacteria 10494
16 JGI25160J50197_1006053 3300003354 Bacteria 4945
17 JGI25160J50197_1006346 3300003354 Bacteria 4800
18 JGI25160J50197_1012040 3300003354 Unclassified 3030
19 JGI25160J50197_1012411 3300003354 Bacteria 2959
20 Ga0055542_1004502 3300003762 Bacteria 3364
21 Ga0055526_1004305 3300003771 Bacteria 8599
22 Ga0055528_1000390 3300003790 Bacteria 35740
23 Ga0055530_10000496 3300003791 Bacteria 34146
24 Ga0055531_10000045 3300003794 Bacteria 132131
25 Ga0055531_10000153 3300003794 Bacteria 80166
26 Ga0055543_1017794 3300004625 Bacteria 1332
27 Ga0065165_1000172 3300005262 Bacteria 114850
28 Ga0065165_1005734 3300005262 Bacteria 6830
29 Ga0065165_1018172 3300005262 Unclassified 2558
30 Ga0068857_100059881 3300005577 Bacteria 3383
31 Ga0068857_100497783 3300005577 Bacteria 1143
32 Ga0068856_100022385 3300005614 Bacteria 6143
33 Ga0068860_100257668 3300005843 Bacteria 1700
34 Ga0075366_10017483 3300006195 Bacteria 4127
35 Ga0075366_10021793 3300006195 Bacteria 3726
36 Ga0068871_100135212 3300006358 Bacteria 2093
37 Ga0105240_10140295 3300009093 Bacteria 2890
38 Ga0114129_10010212 3300009147 Bacteria 13386
39 Ga0114129_10014200 3300009147 Bacteria 11348
40 Ga0105241_10019516 3300009174 Bacteria 4999
41 Ga0105237_10012000 3300009545 Bacteria 9152
42 Ga0105239_10001450 3300010375 Bacteria 31601
43 Ga0105239_10005014 3300010375 Bacteria 15634
44 Ga0105239_10090795 3300010375 Bacteria 3370
45 Ga0157371_10017142 3300013102 Bacteria 5387
46 Ga0157374_10230960 3300013296 Bacteria 1817
47 Ga0157376_10088872 3300014969 Unclassified 2670
48 Ga0182005_1000418 3300015265 Bacteria 22953
49 Ga0209436_101044 3300025208 Bacteria 10552
50 Ga0209436_105203 3300025208 Bacteria 3034
51 Ga0209258_100247 3300025242 Bacteria 99442
52 Ga0209646_1000003 3300025246 Bacteria 1160860
53 Ga0209646_1000017 3300025246 Bacteria 488265
54 Ga0209646_1001850 3300025246 Bacteria 5222
55 Ga0209026_1000182 3300025250 Bacteria 92580
56 Ga0209026_1000314 3300025250 Bacteria 51962
57 Ga0209148_1000207 3300025254 Bacteria 104094
58 Ga0209673_1000081 3300025273 Bacteria 220762
59 Ga0209130_1000970 3300025284 Bacteria 22582
60 Ga0209564_1007586 3300025295 Bacteria 5571
61 Ga0209564_1021044 3300025295 Bacteria 2365
62 Ga0209758_1014475 3300025297 Bacteria 4190
63 Ga0209758_1016965 3300025297 Bacteria 3661
64 Ga0209758_1041970 3300025297 Bacteria 1702
65 Ga0209050_1000346 3300025298 Bacteria 91427
66 Ga0207426_1000363 3300025302 Bacteria 81330
67 Ga0207426_1000412 3300025302 Bacteria 71401
68 Ga0207426_1001745 3300025302 Bacteria 16547
69 Ga0207426_1003420 3300025302 Bacteria 8650
70 Ga0207426_1013815 3300025302 Bacteria 2977
71 Ga0209257_1000001 3300025304 Bacteria 2274655
72 Ga0209257_1000937 3300025304 Bacteria 40332
73 Ga0207654_10020837 3300025911 Bacteria 3481
74 Ga0207667_10033219 3300025949 Bacteria 5551
75 Ga0207667_10063772 3300025949 Bacteria 3850
76 Ga0207702_10024102 3300026078 Bacteria 5049
77 Ga0207674_10003831 3300026116 Bacteria 18337
78 Ga0268264_10210971 3300028381 Bacteria 1783
79 Ga0268264_10321521 3300028381 Bacteria 1463
80 Ga0307513_10305368 3300031456 Bacteria 1356
81 Ga0307509_10022757 3300031507 Bacteria 7056
82 Ga0307509_10202781 3300031507 Unclassified 1818
83 Ga0307508_10002685 3300031616 Bacteria 18623
84 Ga0307516_10414775 3300031730 Unclassified 1005
85 Ga0373935_0271811 3300035692 Unclassified 1191
86 Ga0373927_0035398 3300035695 Bacteria 3247
87 Ga0373925_0072979 3300037068 Unclassified 2597
88 Ga0439436_0022025 3300041404 Bacteria 1889
89 Ga0439439_0021372 3300041406 Bacteria 1613
90 Ga0451802_0481104 3300041460 Bacteria 973
91 Ga0451853_1622626 3300041512 Bacteria 4949
92 Ga0451853_2511788 3300041512 Bacteria 1305
93 Ga0439449_0060625 3300042007 Bacteria 1396
94 Ga0439457_001229 3300042014 Bacteria 7709
95 Ga0439457_003145 3300042014 Bacteria 4559
96 Ga0439462_0005848 3300042015 Bacteria 3045
97 Ga0439462_0024884 3300042015 Bacteria 1575
98 Ga0466969_0000149 3300044656 Bacteria 37747
99 Ga0466969_0001477 3300044656 Bacteria 12638
100 Ga0466972_0000040 3300044658 Bacteria 133427
101 Ga0466972_0000101 3300044658 Bacteria 75550
102 Ga0466972_0009554 3300044658 Bacteria 4871
103 Ga0466972_0091623 3300044658 Bacteria 1441
104 Ga0466966_0000045 3300044684 Bacteria 92504
105 Ga0466966_0040963 3300044684 Bacteria 2978
106 Ga0466968_0034787 3300044735 Unclassified 2105
107 Ga0466957_0000725 3300044842 Bacteria 16890
108 Ga0466957_0018079 3300044842 Bacteria 4135
109 Ga0466957_0162750 3300044842 Bacteria 1450
110 Ga0466959_0000023 3300045049 Bacteria 124545
111 Ga0466959_0000399 3300045049 Bacteria 25506
112 Ga0495627_008410 3300046453 Bacteria 3872
113 Ga0495638_0042387 3300046460 Unclassified 2875
114 Ga0495633_0000005 3300046558 Bacteria 357644
115 Ga0495668_0001443 3300046616 Bacteria 22991
116 Ga0495649_0073275 3300046694 Bacteria 1835
117 Ga0496101_0118603 3300048904 Bacteria 1999
118 Ga0496102_0426943 3300048905 Bacteria 1245
119 Ga0496121_0000020 3300048924 Bacteria 498732
120 Ga0496126_0006136 3300048929 Bacteria 13467
121 Ga0496126_0032622 3300048929 Bacteria 4905
122 Ga0501047_0024238 3300049581 Bacteria 5825
123 Ga0501047_0034850 3300049581 Bacteria 4860
124 Ga0501257_033620 3300049686 Bacteria 1243
125 Ga0501225_0000182 3300049705 Bacteria 19491
126 Ga0501225_0010550 3300049705 Bacteria 2616
127 Ga0501241_000073 3300049758 Bacteria 22929
128 Ga0501241_000394 3300049758 Bacteria 9572
129 Ga0501035_0511638 3300049822 Bacteria 987
130 nmdc:mga0k408_16549_c1 3300050493 Bacteria 4092
131 nmdc:mga0k408_31773_c1 3300050493 Bacteria 3016
132 nmdc:mga05p37_1502_c2 3300050507 Bacteria 17494
133 nmdc:mga05p37_6859_c1 3300050507 Bacteria 13426
134 Ga0500578_0000018 3300053086 Bacteria 172537
135 Ga0500578_0000054 3300053086 Bacteria 121082
136 Ga0500578_0025899 3300053086 Bacteria 3763
137 Ga0500644_0000041 3300053088 Bacteria 77645
138 Ga0500644_0000247 3300053088 Bacteria 30626
139 Ga0500644_0014524 3300053088 Bacteria 2225
140 Ga0500583_0000005 3300053092 Bacteria 166480
141 Ga0500583_0000125 3300053092 Bacteria 35448
142 Ga0500583_0010951 3300053092 Bacteria 3393
143 Ga0500583_0015855 3300053092 Bacteria 2993
144 Ga0500651_0047467 3300053093 Bacteria 2699
145 Ga0500650_0125893 3300053098 Bacteria 1193
146 Ga0500569_005055 3300053109 Bacteria 2813
147 Ga0500569_014659 3300053109 Unclassified 1945
148 Ga0500607_028258 3300053121 Bacteria 3106
149 Ga0500642_0120178 3300053130 Bacteria 1229
150 Ga0500652_040519 3300053131 Bacteria 1872
151 Ga0500658_0000923 3300053134 Bacteria 11998
152 Ga0500559_0012684 3300053136 Bacteria 3578
153 Ga0500559_0062628 3300053136 Bacteria 1661
154 Ga0500559_0116943 3300053136 Bacteria 1238
155 Ga0500561_0016853 3300053137 Bacteria 1647
156 Ga0500577_0001805 3300053142 Bacteria 5464
157 Ga0500577_0006207 3300053142 Bacteria 3279
158 Ga0500588_0018966 3300053146 Unclassified 1822
159 Ga0500589_099792 3300053147 Bacteria 1263
160 Ga0500604_0000943 3300053151 Bacteria 8050
161 Ga0500616_0015652 3300053153 Bacteria 4330
162 Ga0500616_0031379 3300053153 Unclassified 2911
163 Ga0500622_0000042 3300053156 Bacteria 161253
164 Ga0500622_0000220 3300053156 Bacteria 60029
165 Ga0500622_0089132 3300053156 Bacteria 1533
166 Ga0500622_0097999 3300053156 Bacteria 1447
167 Ga0500622_0109784 3300053156 Bacteria 1349
168 Ga0500633_0007569 3300053160 Bacteria 2744
169 Ga0500633_0013236 3300053160 Bacteria 2305
170 Ga0500636_0221885 3300053177 Bacteria 984
171 Ga0500611_002538 3300053727 Bacteria 2205
172 Ga0466962_0042332 3300061719 Bacteria 2180

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048924 Ga0496121_0000020 Ga0496121_0000020_122277_123188 279
2 3300025208 Ga0209436_105203 Ga0209436_1052032 282
3 3300025302 Ga0207426_1013815 Ga0207426_10138152 282
4 3300003316 rootH1_10123530 rootH1_101235302 285
5 3300003322 rootL2_10122535 rootL2_101225353 285
6 3300015265 Ga0182005_1000418 Ga0182005_10004183 287
7 3300009093 Ga0105240_10140295 Ga0105240_101402952 290
8 3300009174 Ga0105241_10019516 Ga0105241_100195162 290
9 3300009545 Ga0105237_10012000 Ga0105237_100120003 290
10 3300044842 Ga0466957_0162750 Ga0466957_0162750_333_1244 290
11 3300031507 Ga0307509_10202781 Ga0307509_102027812 291
12 3300010375 Ga0105239_10005014 Ga0105239_100050149 292
13 3300025949 Ga0207667_10063772 Ga0207667_100637722 292
14 3300026116 Ga0207674_10003831 Ga0207674_100038317 292
15 3300044656 Ga0466969_0000149 Ga0466969_0000149_9533_10414 292
16 3300044684 Ga0466966_0000045 Ga0466966_0000045_22771_23652 292
17 3300044735 Ga0466968_0034787 Ga0466968_0034787_456_1337 292
18 3300045049 Ga0466959_0000023 Ga0466959_0000023_28904_29785 292
19 3300061719 Ga0466962_0042332 Ga0466962_0042332_431_1315 292
20 3300031730 Ga0307516_10414775 Ga0307516_104147751 293
21 3300037068 Ga0373925_0072979 Ga0373925_0072979_684_1565 293
22 3300042007 Ga0439449_0060625 Ga0439449_0060625_233_1114 293
23 3300042015 Ga0439462_0024884 Ga0439462_0024884_393_1274 293
24 3300049686 Ga0501257_033620 Ga0501257_033620_211_1092 293
25 3300049705 Ga0501225_0010550 Ga0501225_0010550_217_1098 293
26 3300053146 Ga0500588_0018966 Ga0500588_0018966_809_1690 293
27 3300053153 Ga0500616_0031379 Ga0500616_0031379_1442_2323 293
28 3300053156 Ga0500622_0089132 Ga0500622_0089132_443_1324 293
29 iso_pu_bacteria 2818991460 2819682228 295
30 iso_pu_bacteria 2884791551 2884795655 295
31 iso_pu_bacteria 2929177148 2929181400 295
32 iso_pu_bacteria 2945977869 2945983780 295
33 iso_pu_bacteria 2946013367 2946016811 295
34 iso_pu_bacteria 2738541278 2738726961 296
35 iso_pu_bacteria 2929921140 2929925490 296
36 3300044842 Ga0466957_0000725 Ga0466957_0000725_10219_11271 297
37 3300053151 Ga0500604_0000943 Ga0500604_0000943_1285_2364 297
38 iso_pu_bacteria 2818991442 2819573468 297
39 iso_pu_bacteria 2929239360 2929241097 297
40 iso_pu_bacteria 2818991442 2819573943 298
41 iso_pu_bacteria 2821136567 2821137256 298
42 iso_pu_bacteria 2904467357 2904468002 298
43 iso_pu_bacteria 2929239360 2929241562 298
44 iso_pu_bacteria 2929921140 2929927027 298
45 iso_pu_bacteria 8003151029 8003155086 298
46 3300002739 JGI25158J39367_1002660 JGI25158J39367_10026603 299
47 3300003316 rootH1_10173133 rootH1_101731332 299
48 3300003320 rootH2_10049911 rootH2_100499113 299
49 3300003354 JGI25160J50197_1006346 JGI25160J50197_10063463 299
50 3300005577 Ga0068857_100497783 Ga0068857_1004977832 299
51 3300006195 Ga0075366_10017483 Ga0075366_100174832 299
52 3300025208 Ga0209436_101044 Ga0209436_1010442 299
53 3300025284 Ga0209130_1000970 Ga0209130_100097017 299
54 3300025302 Ga0207426_1000412 Ga0207426_100041239 299
55 3300028381 Ga0268264_10210971 Ga0268264_102109712 299
56 3300035695 Ga0373927_0035398 Ga0373927_0035398_1639_2553 299
57 3300044658 Ga0466972_0000040 Ga0466972_0000040_18399_19298 299
58 3300050493 nmdc:mga0k408_16549_c1 nmdc:mga0k408_16549_c1_798_1697 299
59 3300053086 Ga0500578_0025899 Ga0500578_0025899_262_1161 299
60 3300053130 Ga0500642_0120178 Ga0500642_0120178_235_1134 299
61 3300053156 Ga0500622_0109784 Ga0500622_0109784_29_928 299
62 3300002738 JGI25154J39366_1000005 JGI25154J39366_1000005248 300
63 3300003354 JGI25160J50197_1006053 JGI25160J50197_10060535 300
64 3300003354 JGI25160J50197_1012040 JGI25160J50197_10120402 300
65 3300005262 Ga0065165_1018172 Ga0065165_10181722 300
66 3300005843 Ga0068860_100257668 Ga0068860_1002576682 300
67 3300006358 Ga0068871_100135212 Ga0068871_1001352122 300
68 3300009147 Ga0114129_10010212 Ga0114129_100102126 300
69 3300013296 Ga0157374_10230960 Ga0157374_102309602 300
70 3300025246 Ga0209646_1000017 Ga0209646_1000017156 300
71 3300025246 Ga0209646_1001850 Ga0209646_10018503 300
72 3300025250 Ga0209026_1000314 Ga0209026_10003149 300
73 3300025302 Ga0207426_1000363 Ga0207426_100036351 300
74 3300028381 Ga0268264_10321521 Ga0268264_103215212 300
75 3300031456 Ga0307513_10305368 Ga0307513_103053681 300
76 3300041404 Ga0439436_0022025 Ga0439436_0022025_93_995 300
77 3300041406 Ga0439439_0021372 Ga0439439_0021372_503_1405 300
78 3300041460 Ga0451802_0481104 Ga0451802_0481104_53_958 300
79 3300042014 Ga0439457_003145 Ga0439457_003145_2599_3501 300
80 3300044658 Ga0466972_0091623 Ga0466972_0091623_367_1269 300
81 3300049581 Ga0501047_0024238 Ga0501047_0024238_1575_2477 300
82 3300049705 Ga0501225_0000182 Ga0501225_0000182_3766_4668 300
83 3300050507 nmdc:mga05p37_6859_c1 nmdc:mga05p37_6859_c1_4588_5643 300
84 3300053086 Ga0500578_0000054 Ga0500578_0000054_72405_73307 300
85 3300053092 Ga0500583_0000005 Ga0500583_0000005_55067_55969 300
86 3300053092 Ga0500583_0000125 Ga0500583_0000125_29273_30352 300
87 3300053092 Ga0500583_0015855 Ga0500583_0015855_1810_2712 300
88 3300053136 Ga0500559_0116943 Ga0500559_0116943_284_1186 300
89 3300053156 Ga0500622_0097999 Ga0500622_0097999_233_1135 300
90 3300053727 Ga0500611_002538 Ga0500611_002538_424_1503 300
91 iso_pu_bacteria 8003151029 8003155913 300
92 3300003316 rootH1_10068424 rootH1_100684242 301
93 3300003323 rootH1_10000662 rootH1_1000066239 301
94 3300006195 Ga0075366_10021793 Ga0075366_100217933 301
95 3300009147 Ga0114129_10014200 Ga0114129_100142002 301
96 3300010375 Ga0105239_10001450 Ga0105239_100014509 301
97 3300035692 Ga0373935_0271811 Ga0373935_0271811_17_967 301
98 3300041512 Ga0451853_1622626 Ga0451853_1622626_1213_2295 301
99 3300041512 Ga0451853_2511788 Ga0451853_2511788_349_1257 301
100 3300042014 Ga0439457_001229 Ga0439457_001229_866_1948 301
101 3300042015 Ga0439462_0005848 Ga0439462_0005848_1407_2489 301
102 3300044658 Ga0466972_0000101 Ga0466972_0000101_34959_36041 301
103 3300044658 Ga0466972_0009554 Ga0466972_0009554_1155_2240 301
104 3300046460 Ga0495638_0042387 Ga0495638_0042387_1561_2640 301
105 3300050493 nmdc:mga0k408_31773_c1 nmdc:mga0k408_31773_c1_670_1575 301
106 3300050507 nmdc:mga05p37_1502_c2 nmdc:mga05p37_1502_c2_7054_7959 301
107 3300053086 Ga0500578_0000018 Ga0500578_0000018_40988_42070 301
108 3300053088 Ga0500644_0000247 Ga0500644_0000247_6093_7001 301
109 3300053088 Ga0500644_0014524 Ga0500644_0014524_818_1900 301
110 3300053098 Ga0500650_0125893 Ga0500650_0125893_67_1149 301
111 3300053109 Ga0500569_005055 Ga0500569_005055_1091_1999 301
112 3300053121 Ga0500607_028258 Ga0500607_028258_1087_1995 301
113 3300053136 Ga0500559_0012684 Ga0500559_0012684_1528_2436 301
114 3300053142 Ga0500577_0006207 Ga0500577_0006207_611_1519 301
115 3300053160 Ga0500633_0013236 Ga0500633_0013236_880_1788 301
116 3300053177 Ga0500636_0221885 Ga0500636_0221885_12_956 301
117 iso_pu_bacteria 2738541278 2738729586 301
118 3300001989 JGI24739J22299_10004520 JGI24739J22299_100045203 302
119 3300002738 JGI25154J39366_1000019 JGI25154J39366_100001962 302
120 3300003215 JGI25153J46596_10012923 JGI25153J46596_100129233 302
121 3300003316 rootH1_10017121 rootH1_100171213 302
122 3300003320 rootH2_10155869 rootH2_101558692 302
123 3300003323 rootH1_10168945 rootH1_101689453 302
124 3300003354 JGI25160J50197_1001760 JGI25160J50197_10017603 302
125 3300003354 JGI25160J50197_1012411 JGI25160J50197_10124112 302
126 3300003762 Ga0055542_1004502 Ga0055542_10045021 302
127 3300003771 Ga0055526_1004305 Ga0055526_10043052 302
128 3300003790 Ga0055528_1000390 Ga0055528_10003903 302
129 3300003791 Ga0055530_10000496 Ga0055530_1000049620 302
130 3300003794 Ga0055531_10000045 Ga0055531_1000004553 302
131 3300003794 Ga0055531_10000153 Ga0055531_100001539 302
132 3300004625 Ga0055543_1017794 Ga0055543_10177941 302
133 3300005262 Ga0065165_1000172 Ga0065165_100017280 302
134 3300005262 Ga0065165_1005734 Ga0065165_10057343 302
135 3300005577 Ga0068857_100059881 Ga0068857_1000598812 302
136 3300005614 Ga0068856_100022385 Ga0068856_1000223853 302
137 3300010375 Ga0105239_10090795 Ga0105239_100907953 302
138 3300013102 Ga0157371_10017142 Ga0157371_100171423 302
139 3300014969 Ga0157376_10088872 Ga0157376_100888722 302
140 3300025242 Ga0209258_100247 Ga0209258_10024768 302
141 3300025246 Ga0209646_1000003 Ga0209646_1000003675 302
142 3300025250 Ga0209026_1000182 Ga0209026_100018232 302
143 3300025254 Ga0209148_1000207 Ga0209148_100020771 302
144 3300025273 Ga0209673_1000081 Ga0209673_100008174 302
145 3300025295 Ga0209564_1007586 Ga0209564_10075863 302
146 3300025295 Ga0209564_1021044 Ga0209564_10210442 302
147 3300025297 Ga0209758_1014475 Ga0209758_10144753 302
148 3300025297 Ga0209758_1016965 Ga0209758_10169652 302
149 3300025297 Ga0209758_1041970 Ga0209758_10419702 302
150 3300025298 Ga0209050_1000346 Ga0209050_100034626 302
151 3300025302 Ga0207426_1001745 Ga0207426_10017454 302
152 3300025302 Ga0207426_1003420 Ga0207426_10034202 302
153 3300025304 Ga0209257_1000001 Ga0209257_10000011075 302
154 3300025304 Ga0209257_1000001 Ga0209257_10000011541 302
155 3300025304 Ga0209257_1000937 Ga0209257_100093721 302
156 3300025911 Ga0207654_10020837 Ga0207654_100208372 302
157 3300025949 Ga0207667_10033219 Ga0207667_100332193 302
158 3300026078 Ga0207702_10024102 Ga0207702_100241023 302
159 3300031507 Ga0307509_10022757 Ga0307509_100227573 302
160 3300031616 Ga0307508_10002685 Ga0307508_100026858 302
161 3300044656 Ga0466969_0001477 Ga0466969_0001477_10535_11443 302
162 3300044684 Ga0466966_0040963 Ga0466966_0040963_308_1216 302
163 3300044842 Ga0466957_0018079 Ga0466957_0018079_2729_3637 302
164 3300045049 Ga0466959_0000399 Ga0466959_0000399_22524_23432 302
165 3300046453 Ga0495627_008410 Ga0495627_008410_2842_3753 302
166 3300046558 Ga0495633_0000005 Ga0495633_0000005_347306_348217 302
167 3300046616 Ga0495668_0001443 Ga0495668_0001443_10_1068 302
168 3300046694 Ga0495649_0073275 Ga0495649_0073275_122_1210 302
169 3300048904 Ga0496101_0118603 Ga0496101_0118603_1062_1973 302
170 3300048905 Ga0496102_0426943 Ga0496102_0426943_272_1183 302
171 3300048929 Ga0496126_0006136 Ga0496126_0006136_4484_5395 302
172 3300048929 Ga0496126_0032622 Ga0496126_0032622_2076_2987 302
173 3300049581 Ga0501047_0034850 Ga0501047_0034850_1302_2210 302
174 3300049758 Ga0501241_000073 Ga0501241_000073_9174_10085 302
175 3300049758 Ga0501241_000394 Ga0501241_000394_6443_7354 302
176 3300049822 Ga0501035_0511638 Ga0501035_0511638_13_921 302
177 3300053088 Ga0500644_0000041 Ga0500644_0000041_49554_50465 302
178 3300053092 Ga0500583_0010951 Ga0500583_0010951_614_1525 302
179 3300053093 Ga0500651_0047467 Ga0500651_0047467_1076_1987 302
180 3300053109 Ga0500569_014659 Ga0500569_014659_360_1271 302
181 3300053131 Ga0500652_040519 Ga0500652_040519_902_1810 302
182 3300053134 Ga0500658_0000923 Ga0500658_0000923_6187_7098 302
183 3300053136 Ga0500559_0062628 Ga0500559_0062628_40_951 302
184 3300053137 Ga0500561_0016853 Ga0500561_0016853_523_1434 302
185 3300053142 Ga0500577_0001805 Ga0500577_0001805_1585_2496 302
186 3300053147 Ga0500589_099792 Ga0500589_099792_159_1070 302
187 3300053153 Ga0500616_0015652 Ga0500616_0015652_941_1852 302
188 3300053156 Ga0500622_0000042 Ga0500622_0000042_126379_127287 302
189 3300053156 Ga0500622_0000220 Ga0500622_0000220_17530_18441 302
190 3300053160 Ga0500633_0007569 Ga0500633_0007569_1202_2113 302

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF15890

Peptidase_Mx1

Putative zinc-binding metallo-peptidase

37

288

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l7a-assembly1.cif.gz_A crystal structure of a putative zinc-binding metallo-peptidase (baccac_01431) from bacteroides caccae atcc 43185 at 2.10 a resolution 0.8451 44 299
4l7a-assembly1.cif.gz_A crystal structure of a putative zinc-binding metallo-peptidase (baccac_01431) from bacteroides caccae atcc 43185 at 2.10 a resolution 0.777 44 299
4ecb-assembly1.cif.gz_A chimeric gst containing inserts of kininogen peptides 0.3502 153 285
5ds5-assembly1.cif.gz_D crystal structure the escherichia coli cas1-cas2 complex bound to protospacer dna and mg 0.3389 148 297
1fhe-assembly1.cif.gz_A-2 glutathione transferase (fh47) from fasciola hepatica 0.3287 152 281
ID Description Score Start End Superfamily
4l7aB00 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain); 0.8046 44 299 3.40.390.70
4l7aB00 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain); 0.7415 44 299 3.40.390.70
af_A0A386CAB9_552_678_1.25.40.180 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.4551 224 297 1.25.40.180
af_Q9EQF2_422_713_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.3536 138 275 3.40.390.10
af_Q4CNM0_19_160_1.25.40.90 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.3493 152 296 1.25.40.90
ID Description Score Start End GO Terms
AF-A0A4V1UJ13-F1-model_v4 deleted 0.9533 165 295
AF-A0A6A1C707-F1-model_v4 Uncharacterized protein 0.9336 186 299
AF-A0A1M7N305-F1-model_v4 Substrate import-associated zinc metallohydrolase lipoprotein 0.9297 26 302 GO:0016787
AF-A0A519W2G9-F1-model_v4 Uncharacterized protein 0.925 183 295
AF-A0A1M7N305-F1-model_v4 Substrate import-associated zinc metallohydrolase lipoprotein 0.9231 26 302 GO:0016787

Feature Viewer

pLDDT pTM Quality
85.89 0.82 High
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Predicted Structure (AlphaFold2)

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