F292646

General Info

Members Datasets Scaffolds Average Seq Length
190 142 189 375

Family's Representative Sequence

Representative Sequence 3300026035|Ga0207703_10140861|Ga0207703_101408612
Length 439
Sequence VVARHAVANTSAIHAPTAANRITGKAASLTIDHQTTRFPDYPIHGSTRDNAAMNKTIGSISAVSAVLALIVGAAAQTRPRARDVGVAPGIYPTGAANAITDVEGVRVGHTTVIDGDRVRTGVTAIVPHAGNVFQDKVAGAVFVGNAFGKLAGSTQVNELGTIETPIVLTNTLSVGTAMDAVVRYTIGQPGNEQVRSVNALVGETNDGGLNDIRGLHVTREHVLEAIRGAKGGPVSEGTVGAGTGTVCYGWKGGIGTSSRRIAPGEGRGARREPAYTVGVLAQTNFGGNLTIAGVPVFKSLQPPGRRAASAGPVRVDSSADGSCMLVVATDAPLDARDLHRLAARAVFGLGRTGSAYSNGSGDFAIAFSTSPEMRSRFNETAARTRAILPTDATSPLFEAVLEATEEAVYNSLFQATTVRSANGTAEAIPIDRIRELLKK

Samples

Sample ID Description Type Environment
1 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
70 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
104 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
105 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
106 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
107 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
108 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
109 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
110 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
111 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
112 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
113 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
114 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
115 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
116 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
123 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
127 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
139 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.47
Metatranscriptomes 0
Isolates 0.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.58
Nodule 0
Rhizoplane 0.53
Rhizosphere 96.84
Stem 0
Stem Tuber 0
Unclassified 1.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10002186 3300005328 Bacteria 9966
2 Ga0070683_100254206 3300005329 Bacteria 1671
3 Ga0070690_100052633 3300005330 Bacteria 2603
4 Ga0070670_100048236 3300005331 Bacteria 3665
5 Ga0070660_100002386 3300005339 Bacteria 12903
6 Ga0070691_10001966 3300005341 Bacteria 9046
7 Ga0070687_100008632 3300005343 Bacteria 4326
8 Ga0070661_100183653 3300005344 Bacteria 1592
9 Ga0070668_100127508 3300005347 Bacteria 2039
10 Ga0070669_100008833 3300005353 Bacteria 7191
11 Ga0070669_100043927 3300005353 Bacteria 3256
12 Ga0070675_100001159 3300005354 Bacteria 19044
13 Ga0070675_100137252 3300005354 Bacteria 2087
14 Ga0070671_100033110 3300005355 Bacteria 4273
15 Ga0070671_100278586 3300005355 Bacteria 1422
16 Ga0070674_100005749 3300005356 Bacteria 7195
17 Ga0070667_100017866 3300005367 Bacteria 5879
18 Ga0070714_100010986 3300005435 Bacteria 7172
19 Ga0070701_10010296 3300005438 Bacteria 4129
20 Ga0070705_100052417 3300005440 Bacteria 2384
21 Ga0070700_100066833 3300005441 Bacteria 2282
22 Ga0070694_100037867 3300005444 Bacteria 3201
23 Ga0070708_100012885 3300005445 Bacteria 6833
24 Ga0070681_10220532 3300005458 Bacteria 1812
25 Ga0068867_100008195 3300005459 Bacteria 7380
26 Ga0068867_100019230 3300005459 Bacteria 4866
27 Ga0070706_100093320 3300005467 Unclassified 2793
28 Ga0070698_100038860 3300005471 Bacteria 4904
29 Ga0070698_100040115 3300005471 Unclassified 4814
30 Ga0070698_100060528 3300005471 Unclassified 3822
31 Ga0070699_100000176 3300005518 Bacteria 61756
32 Ga0070679_100044463 3300005530 Bacteria 4424
33 Ga0070684_100105815 3300005535 Bacteria 2518
34 Ga0070672_100007577 3300005543 Bacteria 7377
35 Ga0070672_100024679 3300005543 Bacteria 4447
36 Ga0070686_100000369 3300005544 Bacteria 28603
37 Ga0070695_100009879 3300005545 Bacteria 5687
38 Ga0070696_100002682 3300005546 Bacteria 11796
39 Ga0070696_100126697 3300005546 Bacteria 1853
40 Ga0070704_100003002 3300005549 Bacteria 9594
41 Ga0070704_100081349 3300005549 Unclassified 2386
42 Ga0068855_100215704 3300005563 Bacteria 2154
43 Ga0068854_100004152 3300005578 Bacteria 9106
44 Ga0068854_100150786 3300005578 Bacteria 1792
45 Ga0070702_100002997 3300005615 Bacteria 7466
46 Ga0068852_100313170 3300005616 Bacteria 1522
47 Ga0068859_100039815 3300005617 Bacteria 4716
48 Ga0068861_100004062 3300005719 Bacteria 9801
49 Ga0068861_100033231 3300005719 Bacteria 3804
50 Ga0068851_10024356 3300005834 Unclassified 2963
51 Ga0068863_100003214 3300005841 Bacteria 16177
52 Ga0068858_100030743 3300005842 Bacteria 4988
53 Ga0068858_100071165 3300005842 Bacteria 3225
54 Ga0068860_100031740 3300005843 Bacteria 5079
55 Ga0068862_100092953 3300005844 Bacteria 2630
56 Ga0068862_100119437 3300005844 Bacteria 2322
57 Ga0068862_100177800 3300005844 Bacteria 1908
58 Ga0081455_10012945 3300005937 Bacteria 8274
59 Ga0075364_10031708 3300006051 Bacteria 3395
60 Ga0068871_100388651 3300006358 Bacteria 1241
61 Ga0075428_100110593 3300006844 Bacteria 2993
62 Ga0075431_100024266 3300006847 Bacteria 6211
63 Ga0075433_10016149 3300006852 Bacteria 6142
64 Ga0075434_100009693 3300006871 Bacteria 8999
65 Ga0075434_100019362 3300006871 Bacteria 6586
66 Ga0075434_100038605 3300006871 Bacteria 4730
67 Ga0075429_100027937 3300006880 Bacteria 4897
68 Ga0068865_100133129 3300006881 Unclassified 1865
69 Ga0075436_100032047 3300006914 Bacteria 3622
70 Ga0075436_100057603 3300006914 Bacteria 2683
71 Ga0097620_100039813 3300006931 Bacteria 4716
72 Ga0075435_100000720 3300007076 Bacteria 20554
73 Ga0075435_100001837 3300007076 Bacteria 13787
74 Ga0075435_100162865 3300007076 Bacteria 1879
75 Ga0099794_10056623 3300007265 Bacteria 1897
76 Ga0111539_10006667 3300009094 Bacteria 14871
77 Ga0111539_10013237 3300009094 Bacteria 10310
78 Ga0114129_10026967 3300009147 Bacteria 8133
79 Ga0114129_10037199 3300009147 Bacteria 6873
80 Ga0114129_10038669 3300009147 Bacteria 6728
81 Ga0114129_10059148 3300009147 Bacteria 5358
82 Ga0105238_10357764 3300009551 Unclassified 1449
83 Ga0105249_10237407 3300009553 Unclassified 1801
84 Ga0157374_10432166 3300013296 Unclassified 1316
85 Ga0157378_10268681 3300013297 Bacteria 1639
86 Ga0157375_10015824 3300013308 Bacteria 6759
87 Ga0163163_10134577 3300014325 Bacteria 2512
88 Ga0163163_10301751 3300014325 Unclassified 1654
89 Ga0157377_10026192 3300014745 Bacteria 3118
90 Ga0157379_10018704 3300014968 Bacteria 6108
91 Ga0157379_10207577 3300014968 Unclassified 1772
92 Ga0157376_10058584 3300014969 Bacteria 3227
93 Ga0157376_10071842 3300014969 Bacteria 2942
94 Ga0157376_10216122 3300014969 Unclassified 1773
95 Ga0213875_10000057 3300021388 Bacteria 136082
96 Ga0207697_10063529 3300025315 Bacteria 1539
97 Ga0207680_10023380 3300025903 Bacteria 3374
98 Ga0207680_10109111 3300025903 Bacteria 1791
99 Ga0207645_10001471 3300025907 Bacteria 19241
100 Ga0207707_10029665 3300025912 Bacteria 4783
101 Ga0207662_10029858 3300025918 Bacteria 3161
102 Ga0207657_10000614 3300025919 Bacteria 37765
103 Ga0207652_10049455 3300025921 Bacteria 3599
104 Ga0207652_10150292 3300025921 Bacteria 2085
105 Ga0207650_10076661 3300025925 Bacteria 2526
106 Ga0207659_10001355 3300025926 Bacteria 14626
107 Ga0207659_10024178 3300025926 Bacteria 4067
108 Ga0207644_10008420 3300025931 Bacteria 6748
109 Ga0207644_10158976 3300025931 Bacteria 1755
110 Ga0207706_10068319 3300025933 Bacteria 3127
111 Ga0207686_10169130 3300025934 Unclassified 1540
112 Ga0207709_10044758 3300025935 Unclassified 2677
113 Ga0207669_10002626 3300025937 Bacteria 7693
114 Ga0207665_10052378 3300025939 Bacteria 2749
115 Ga0207691_10025025 3300025940 Bacteria 5609
116 Ga0207691_10254711 3300025940 Bacteria 1514
117 Ga0207651_10022508 3300025960 Bacteria 3855
118 Ga0207712_10034811 3300025961 Bacteria 3416
119 Ga0207712_10120341 3300025961 Bacteria 1985
120 Ga0207668_10055246 3300025972 Bacteria 2759
121 Ga0207640_10009805 3300025981 Bacteria 5371
122 Ga0207640_10078369 3300025981 Bacteria 2249
123 Ga0207658_10015443 3300025986 Bacteria 5239
124 Ga0207703_10058007 3300026035 Bacteria 3158
125 Ga0207703_10140861 3300026035 Bacteria 2093
126 Ga0207708_10000371 3300026075 Bacteria 35116
127 Ga0207708_10009079 3300026075 Bacteria 7357
128 Ga0207641_10005015 3300026088 Bacteria 11350
129 Ga0207648_10010094 3300026089 Bacteria 8979
130 Ga0207648_10040442 3300026089 Bacteria 4097
131 Ga0207675_100002462 3300026118 Bacteria 18340
132 Ga0207675_100104710 3300026118 Bacteria 2667
133 Ga0207698_10302924 3300026142 Bacteria 1488
134 Ga0207428_10016700 3300027907 Bacteria 6313
135 Ga0268265_10013230 3300028380 Bacteria 5607
136 Ga0268265_10084588 3300028380 Bacteria 2515
137 Ga0265338_10029465 3300028800 Bacteria 5440
138 Ga0265325_10005919 3300031241 Bacteria 7494
139 Ga0265340_10062359 3300031247 Bacteria 1781
140 Ga0265331_10055798 3300031250 Bacteria 1878
141 Ga0373930_0024440 3300034816 Bacteria 1208
142 Ga0373928_0008577 3300035084 Bacteria 1986
143 Ga0373929_0000628 3300035085 Bacteria 6810
144 Ga0373949_0001706 3300035090 Bacteria 6093
145 Ga0373952_0000164 3300035092 Bacteria 10064
146 Ga0373932_0001537 3300035112 Bacteria 6372
147 Ga0373939_0001302 3300035114 Bacteria 6059
148 Ga0373941_0000567 3300035115 Bacteria 7402
149 Ga0373960_0001840 3300035121 Bacteria 4741
150 Ga0373942_0001604 3300035207 Bacteria 5787
151 Ga0373961_0003926 3300035241 Bacteria 3631
152 Ga0373962_0001150 3300035242 Bacteria 6171
153 Ga0373931_0032690 3300035691 Bacteria 2693
154 Ga0436364_1102754 3300037853 Bacteria 136103
155 Ga0451577_0083344 3300042876 Bacteria 2852
156 Ga0466964_0040634 3300044706 Unclassified 1879
157 Ga0453684_0021356 3300044712 Bacteria 9678
158 Ga0451576_0017647 3300045051 Bacteria 7843
159 Ga0495629_0273448 3300046459 Archaea 1160
160 Ga0495651_0054406 3300046462 Bacteria 3078
161 Ga0495580_0045513 3300046472 Bacteria 3117
162 Ga0495665_0029966 3300046531 Bacteria 2913
163 Ga0495640_0222268 3300046533 Unclassified 1191
164 Ga0495587_0092691 3300046536 Unclassified 1744
165 Ga0495667_0009491 3300046559 Bacteria 6593
166 Ga0495599_0022350 3300046678 Bacteria 3948
167 Ga0495623_0014568 3300046679 Bacteria 5087
168 Ga0495684_0000817 3300047471 Bacteria 25175
169 Ga0495602_0058186 3300048088 Bacteria 3386
170 Ga0496102_0190918 3300048905 Bacteria 1930
171 nmdc:mga00v17_8920_c1 3300050491 Bacteria 5410
172 nmdc:mga05p37_21466_c1 3300050507 Bacteria 7821
173 nmdc:mga05p37_215055_c1 3300050507 Bacteria 2322
174 nmdc:mga0qj67_73890_c1 3300050509 Bacteria 2724
175 nmdc:mga08y16_4383_c1 3300050511 Bacteria 14749
176 nmdc:mga0n895_10121_c1 3300050512 Bacteria 8301
177 nmdc:mga0n895_157910_c1 3300050512 Bacteria 2299
178 nmdc:mga0n895_399185_c1 3300050512 Bacteria 1391
179 nmdc:mga0n895_56585_c1 3300050512 Bacteria 3864
180 nmdc:mga0n895_808_c1 3300050512 Bacteria 22376
181 nmdc:mga0rr50_230_c1 3300050513 Bacteria 30282
182 nmdc:mga0rr50_611_c1 3300050513 Bacteria 19158
183 nmdc:mga0rr50_9141_c1 3300050513 Bacteria 6209
184 nmdc:mga08x19_290_c1 3300050514 Bacteria 36986
185 nmdc:mga08x19_37779_c1 3300050514 Bacteria 3066
186 nmdc:mga0a205_156853_c1 3300050515 Bacteria 2174
187 nmdc:mga0a205_17042_c1 3300050515 Bacteria 6801
188 Ga0500645_015854 3300053730 Bacteria 2382
189 Ga0501082_0000380 3300060353 Bacteria 39465

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046679 Ga0495623_0014568 Ga0495623_0014568_15_905 292
2 3300025315 Ga0207697_10063529 Ga0207697_100635292 297
3 3300025961 Ga0207712_10034811 Ga0207712_100348112 300
4 3300046531 Ga0495665_0029966 Ga0495665_0029966_1269_2216 311
5 3300050491 nmdc:mga00v17_8920_c1 nmdc:mga00v17_8920_c1_1763_2935 321
6 3300005842 Ga0068858_100071165 Ga0068858_1000711652 325
7 3300014969 Ga0157376_10058584 Ga0157376_100585843 325
8 3300025903 Ga0207680_10023380 Ga0207680_100233802 325
9 3300050512 nmdc:mga0n895_399185_c1 nmdc:mga0n895_399185_c1_190_1311 325
10 3300007076 Ga0075435_100162865 Ga0075435_1001628652 328
11 3300060353 Ga0501082_0000380 Ga0501082_0000380_1244_2353 329
12 3300025986 Ga0207658_10015443 Ga0207658_100154433 334
13 3300046459 Ga0495629_0273448 Ga0495629_0273448_126_1142 334
14 3300046533 Ga0495640_0222268 Ga0495640_0222268_39_1055 334
15 3300025939 Ga0207665_10052378 Ga0207665_100523782 336
16 3300005329 Ga0070683_100254206 Ga0070683_1002542062 337
17 3300005535 Ga0070684_100105815 Ga0070684_1001058152 337
18 3300014969 Ga0157376_10071842 Ga0157376_100718422 337
19 3300046462 Ga0495651_0054406 Ga0495651_0054406_386_1459 337
20 3300046536 Ga0495587_0092691 Ga0495587_0092691_178_1251 337
21 3300046559 Ga0495667_0009491 Ga0495667_0009491_1426_2499 337
22 3300047471 Ga0495684_0000817 Ga0495684_0000817_4152_5225 337
23 3300048088 Ga0495602_0058186 Ga0495602_0058186_786_1859 337
24 3300050507 nmdc:mga05p37_21466_c1 nmdc:mga05p37_21466_c1_1095_2267 337
25 3300006358 Ga0068871_100388651 Ga0068871_1003886511 338
26 3300031250 Ga0265331_10055798 Ga0265331_100557982 338
27 3300034816 Ga0373930_0024440 Ga0373930_0024440_130_1170 340
28 3300053730 Ga0500645_015854 Ga0500645_015854_208_1443 340
29 3300005353 Ga0070669_100008833 Ga0070669_1000088333 341
30 3300005354 Ga0070675_100137252 Ga0070675_1001372521 341
31 3300005356 Ga0070674_100005749 Ga0070674_1000057493 341
32 3300005441 Ga0070700_100066833 Ga0070700_1000668332 341
33 3300005459 Ga0068867_100019230 Ga0068867_1000192302 341
34 3300005616 Ga0068852_100313170 Ga0068852_1003131702 341
35 3300005844 Ga0068862_100119437 Ga0068862_1001194373 341
36 3300006847 Ga0075431_100024266 Ga0075431_1000242664 341
37 3300006880 Ga0075429_100027937 Ga0075429_1000279374 341
38 3300006881 Ga0068865_100133129 Ga0068865_1001331291 341
39 3300006914 Ga0075436_100057603 Ga0075436_1000576033 341
40 3300009147 Ga0114129_10038669 Ga0114129_100386696 341
41 3300009553 Ga0105249_10237407 Ga0105249_102374072 341
42 3300025926 Ga0207659_10024178 Ga0207659_100241783 341
43 3300025934 Ga0207686_10169130 Ga0207686_101691301 341
44 3300025935 Ga0207709_10044758 Ga0207709_100447582 341
45 3300025937 Ga0207669_10002626 Ga0207669_100026266 341
46 3300026075 Ga0207708_10009079 Ga0207708_100090793 341
47 3300026089 Ga0207648_10040442 Ga0207648_100404422 341
48 3300026142 Ga0207698_10302924 Ga0207698_103029242 341
49 3300050509 nmdc:mga0qj67_73890_c1 nmdc:mga0qj67_73890_c1_464_1606 341
50 iso_pu_bacteria 2911138879 2911141135 341
51 3300005471 Ga0070698_100060528 Ga0070698_1000605284 342
52 3300009147 Ga0114129_10037199 Ga0114129_100371992 342
53 3300050513 nmdc:mga0rr50_611_c1 nmdc:mga0rr50_611_c1_1533_2660 342
54 3300005458 Ga0070681_10220532 Ga0070681_102205322 343
55 3300025912 Ga0207707_10029665 Ga0207707_100296655 343
56 3300005355 Ga0070671_100033110 Ga0070671_1000331102 344
57 3300005367 Ga0070667_100017866 Ga0070667_1000178663 344
58 3300005543 Ga0070672_100007577 Ga0070672_1000075773 344
59 3300005617 Ga0068859_100039815 Ga0068859_1000398153 344
60 3300005842 Ga0068858_100030743 Ga0068858_1000307433 344
61 3300005843 Ga0068860_100031740 Ga0068860_1000317403 344
62 3300006931 Ga0097620_100039813 Ga0097620_1000398133 344
63 3300013308 Ga0157375_10015824 Ga0157375_100158244 344
64 3300014968 Ga0157379_10018704 Ga0157379_100187043 344
65 3300025931 Ga0207644_10008420 Ga0207644_100084204 344
66 3300025940 Ga0207691_10025025 Ga0207691_100250253 344
67 3300025960 Ga0207651_10022508 Ga0207651_100225082 344
68 3300026035 Ga0207703_10058007 Ga0207703_100580073 344
69 3300005834 Ga0068851_10024356 Ga0068851_100243562 345
70 3300005435 Ga0070714_100010986 Ga0070714_1000109864 346
71 3300005844 Ga0068862_100092953 Ga0068862_1000929532 346
72 3300028380 Ga0268265_10084588 Ga0268265_100845882 346
73 3300035112 Ga0373932_0001537 Ga0373932_0001537_329_1387 346
74 3300035121 Ga0373960_0001840 Ga0373960_0001840_748_1806 346
75 3300035241 Ga0373961_0003926 Ga0373961_0003926_2362_3420 346
76 3300035691 Ga0373931_0032690 Ga0373931_0032690_1424_2482 346
77 3300046678 Ga0495599_0022350 Ga0495599_0022350_1593_2762 346
78 3300006844 Ga0075428_100110593 Ga0075428_1001105934 347
79 3300006871 Ga0075434_100038605 Ga0075434_1000386052 347
80 3300007076 Ga0075435_100001837 Ga0075435_1000018375 347
81 3300005339 Ga0070660_100002386 Ga0070660_10000238610 348
82 3300005353 Ga0070669_100043927 Ga0070669_1000439273 348
83 3300005471 Ga0070698_100038860 Ga0070698_1000388603 348
84 3300005530 Ga0070679_100044463 Ga0070679_1000444634 348
85 3300005543 Ga0070672_100024679 Ga0070672_1000246793 348
86 3300005563 Ga0068855_100215704 Ga0068855_1002157041 348
87 3300006051 Ga0075364_10031708 Ga0075364_100317081 348
88 3300009094 Ga0111539_10013237 Ga0111539_100132372 348
89 3300025919 Ga0207657_10000614 Ga0207657_1000061412 348
90 3300025921 Ga0207652_10150292 Ga0207652_101502921 348
91 3300025940 Ga0207691_10254711 Ga0207691_102547112 348
92 3300028380 Ga0268265_10013230 Ga0268265_100132303 348
93 3300005354 Ga0070675_100001159 Ga0070675_10000115915 349
94 3300013296 Ga0157374_10432166 Ga0157374_104321661 349
95 3300014325 Ga0163163_10134577 Ga0163163_101345773 349
96 3300014325 Ga0163163_10301751 Ga0163163_103017511 349
97 3300014745 Ga0157377_10026192 Ga0157377_100261922 349
98 3300014968 Ga0157379_10207577 Ga0157379_102075772 349
99 3300021388 Ga0213875_10000057 Ga0213875_10000057101 349
100 3300025926 Ga0207659_10001355 Ga0207659_100013557 349
101 3300037853 Ga0436364_1102754 Ga0436364_1102754_122133_123290 349
102 3300044706 Ga0466964_0040634 Ga0466964_0040634_106_1263 349
103 3300046472 Ga0495580_0045513 Ga0495580_0045513_1092_2252 349
104 3300048905 Ga0496102_0190918 Ga0496102_0190918_471_1565 349
105 3300005344 Ga0070661_100183653 Ga0070661_1001836532 350
106 3300005467 Ga0070706_100093320 Ga0070706_1000933203 350
107 3300005471 Ga0070698_100040115 Ga0070698_1000401152 350
108 3300005518 Ga0070699_100000176 Ga0070699_10000017638 350
109 3300005549 Ga0070704_100081349 Ga0070704_1000813492 350
110 3300005841 Ga0068863_100003214 Ga0068863_1000032144 350
111 3300014969 Ga0157376_10216122 Ga0157376_102161223 350
112 3300026088 Ga0207641_10005015 Ga0207641_100050154 350
113 3300028800 Ga0265338_10029465 Ga0265338_100294652 350
114 3300031241 Ga0265325_10005919 Ga0265325_100059196 350
115 3300031247 Ga0265340_10062359 Ga0265340_100623592 350
116 3300050507 nmdc:mga05p37_215055_c1 nmdc:mga05p37_215055_c1_1009_2148 350
117 3300005331 Ga0070670_100048236 Ga0070670_1000482363 351
118 3300005445 Ga0070708_100012885 Ga0070708_1000128853 351
119 3300006852 Ga0075433_10016149 Ga0075433_100161493 351
120 3300006871 Ga0075434_100009693 Ga0075434_1000096934 351
121 3300025925 Ga0207650_10076661 Ga0207650_100766613 351
122 3300050512 nmdc:mga0n895_10121_c1 nmdc:mga0n895_10121_c1_3542_4729 351
123 3300050515 nmdc:mga0a205_17042_c1 nmdc:mga0a205_17042_c1_4350_5537 351
124 3300009147 Ga0114129_10059148 Ga0114129_100591483 352
125 3300050512 nmdc:mga0n895_157910_c1 nmdc:mga0n895_157910_c1_168_1298 352
126 3300042876 Ga0451577_0083344 Ga0451577_0083344_629_1798 353
127 3300044712 Ga0453684_0021356 Ga0453684_0021356_5305_6474 353
128 3300050512 nmdc:mga0n895_56585_c1 nmdc:mga0n895_56585_c1_373_1536 353
129 3300005330 Ga0070690_100052633 Ga0070690_1000526332 354
130 3300005343 Ga0070687_100008632 Ga0070687_1000086322 354
131 3300005355 Ga0070671_100278586 Ga0070671_1002785861 354
132 3300005544 Ga0070686_100000369 Ga0070686_1000003699 354
133 3300005578 Ga0068854_100004152 Ga0068854_1000041523 354
134 3300005719 Ga0068861_100033231 Ga0068861_1000332312 354
135 3300005937 Ga0081455_10012945 Ga0081455_100129457 354
136 3300006871 Ga0075434_100019362 Ga0075434_1000193623 354
137 3300006914 Ga0075436_100032047 Ga0075436_1000320472 354
138 3300007076 Ga0075435_100000720 Ga0075435_1000007203 354
139 3300025903 Ga0207680_10109111 Ga0207680_101091111 354
140 3300025918 Ga0207662_10029858 Ga0207662_100298582 354
141 3300025921 Ga0207652_10049455 Ga0207652_100494552 354
142 3300025931 Ga0207644_10158976 Ga0207644_101589762 354
143 3300025981 Ga0207640_10009805 Ga0207640_100098053 354
144 3300035084 Ga0373928_0008577 Ga0373928_0008577_561_1742 354
145 3300035085 Ga0373929_0000628 Ga0373929_0000628_2850_4031 354
146 3300035090 Ga0373949_0001706 Ga0373949_0001706_557_1738 354
147 3300035092 Ga0373952_0000164 Ga0373952_0000164_8074_9255 354
148 3300035114 Ga0373939_0001302 Ga0373939_0001302_4425_5606 354
149 3300035115 Ga0373941_0000567 Ga0373941_0000567_2133_3314 354
150 3300035207 Ga0373942_0001604 Ga0373942_0001604_4452_5633 354
151 3300035242 Ga0373962_0001150 Ga0373962_0001150_1597_2778 354
152 3300045051 Ga0451576_0017647 Ga0451576_0017647_1926_3107 354
153 3300050512 nmdc:mga0n895_808_c1 nmdc:mga0n895_808_c1_4164_5333 354
154 3300050513 nmdc:mga0rr50_230_c1 nmdc:mga0rr50_230_c1_24282_25451 354
155 3300050514 nmdc:mga08x19_290_c1 nmdc:mga08x19_290_c1_4388_5557 354
156 3300007265 Ga0099794_10056623 Ga0099794_100566233 355
157 3300050514 nmdc:mga08x19_37779_c1 nmdc:mga08x19_37779_c1_627_1853 356
158 3300009551 Ga0105238_10357764 Ga0105238_103577641 357
159 3300050513 nmdc:mga0rr50_9141_c1 nmdc:mga0rr50_9141_c1_1037_2272 357
160 3300005347 Ga0070668_100127508 Ga0070668_1001275082 358
161 3300005440 Ga0070705_100052417 Ga0070705_1000524172 358
162 3300005844 Ga0068862_100177800 Ga0068862_1001778001 358
163 3300009147 Ga0114129_10026967 Ga0114129_100269678 358
164 3300013297 Ga0157378_10268681 Ga0157378_102686812 358
165 3300025933 Ga0207706_10068319 Ga0207706_100683193 358
166 3300025961 Ga0207712_10120341 Ga0207712_101203411 358
167 3300025972 Ga0207668_10055246 Ga0207668_100552463 358
168 3300026118 Ga0207675_100104710 Ga0207675_1001047103 358
169 3300005546 Ga0070696_100126697 Ga0070696_1001266972 359
170 3300009094 Ga0111539_10006667 Ga0111539_100066675 359
171 3300027907 Ga0207428_10016700 Ga0207428_100167003 359
172 3300050511 nmdc:mga08y16_4383_c1 nmdc:mga08y16_4383_c1_11717_12877 359
173 3300050515 nmdc:mga0a205_156853_c1 nmdc:mga0a205_156853_c1_899_2059 359
174 3300026035 Ga0207703_10140861 Ga0207703_101408612 361
175 3300005328 Ga0070676_10002186 Ga0070676_100021863 363
176 3300005341 Ga0070691_10001966 Ga0070691_100019668 363
177 3300005438 Ga0070701_10010296 Ga0070701_100102963 363
178 3300005444 Ga0070694_100037867 Ga0070694_1000378672 363
179 3300005459 Ga0068867_100008195 Ga0068867_1000081954 363
180 3300005545 Ga0070695_100009879 Ga0070695_1000098793 363
181 3300005546 Ga0070696_100002682 Ga0070696_1000026828 363
182 3300005549 Ga0070704_100003002 Ga0070704_1000030025 363
183 3300005578 Ga0068854_100150786 Ga0068854_1001507862 363
184 3300005615 Ga0070702_100002997 Ga0070702_1000029975 363
185 3300005719 Ga0068861_100004062 Ga0068861_1000040623 363
186 3300025907 Ga0207645_10001471 Ga0207645_1000147116 363
187 3300025981 Ga0207640_10078369 Ga0207640_100783692 363
188 3300026075 Ga0207708_10000371 Ga0207708_100003714 363
189 3300026089 Ga0207648_10010094 Ga0207648_100100946 363
190 3300026118 Ga0207675_100002462 Ga0207675_10000246212 363

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03576

Peptidase_S58

Peptidase family S58

97

426

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2drh-assembly1.cif.gz_D crystal structure of the ph0078 protein from pyrococcus horikoshii ot3 0.9109 5 362
2drh-assembly1.cif.gz_C crystal structure of the ph0078 protein from pyrococcus horikoshii ot3 0.9044 5 362
2drh-assembly1.cif.gz_D crystal structure of the ph0078 protein from pyrococcus horikoshii ot3 0.8958 5 362
5tzb-assembly2.cif.gz_F burkholderia sp. beta-aminopeptidase 0.8917 5 362
2drh-assembly1.cif.gz_C crystal structure of the ph0078 protein from pyrococcus horikoshii ot3 0.8869 5 362
ID Description Score Start End Superfamily
2drhD00 Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase 0.9109 5 362 3.60.70.12
2drhD00 Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase 0.8958 5 362 3.60.70.12
1b65F00 Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase 0.8863 3 362 3.60.70.12
5tzbB00 Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase 0.884 5 362 3.60.70.12
3n5iD00 Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase 0.863 5 363 3.60.70.12
ID Description Score Start End GO Terms
AF-A0A2V6BKY0-F1-model_v4 Aminopeptidase 0.987 6 127 GO:0004177
AF-A0A7C0XJA2-F1-model_v4 S58 family peptidase 0.983 7 119 GO:0004177
AF-A0A7Y2DY69-F1-model_v4 S58 family peptidase 0.982 6 99 GO:0004177
AF-A0A7C0ZFH5-F1-model_v4 S58 family peptidase 0.9819 6 132 GO:0004177
AF-A0A2V5Y3S2-F1-model_v4 Aminopeptidase 0.9805 6 118 GO:0004177

Feature Viewer

pLDDT pTM Quality
86.21 0.9 High
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Predicted Structure (AlphaFold2)

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