F293429

General Info

Members Datasets Scaffolds Average Seq Length
191 158 188 226

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10033788|rootL2_100337883
Length 269
Sequence LALWGASGLGEARRRGSRAGQKYASGRPVLSEAVRIAPSILSADFGRLAEEVRAVEAAGADWIHVDVMDGRFVPNITIGPLIVRAVRAATTLPVDVHLMIVEPEKYVAEFCAAGADYVSVHVEASPHLHRTLQQIRGHGKKAGVVLNPHTSEEAIRYALEDADLVLVMSVNPGFGGQKFIPNVLPKLGALREAIDRAGLRTELEIDGGVAVGTAREVARAGARVLVAGSAVFGAAAGAGEISFEERVARYAGAIRDLRQDAVSGLGASA

Samples

Sample ID Description Type Environment
1 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
2 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
3 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
57 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
58 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
59 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
62 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
63 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
64 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
65 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
66 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
67 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
68 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
69 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
72 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
73 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
76 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
77 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
78 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
79 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
80 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
83 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
85 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
88 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
93 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
94 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
95 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
96 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
97 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
106 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
107 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
108 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
109 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
116 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
119 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
125 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
126 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
127 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
128 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
129 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
130 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
131 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
135 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
155 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
156 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
157 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
158 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.43
Metatranscriptomes 0
Isolates 1.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.62
Nodule 0
Rhizoplane 2.62
Rhizosphere 86.91
Stem 0
Stem Tuber 0
Unclassified 7.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10073381 3300003320 Bacteria 6566
2 rootL2_10033788 3300003322 Bacteria 3399
3 rootH1_10092676 3300003323 Bacteria 3264
4 rootH1_10107607 3300003323 Bacteria 13604
5 Ga0070683_100184046 3300005329 Bacteria 1983
6 Ga0070682_100007095 3300005337 Bacteria 6305
7 Ga0070682_100102465 3300005337 Bacteria 1892
8 Ga0070675_100247266 3300005354 Bacteria 1560
9 Ga0070705_100067034 3300005440 Bacteria 2155
10 Ga0070681_10915070 3300005458 Bacteria 796
11 Ga0070707_100112391 3300005468 Bacteria 2642
12 Ga0070698_100500566 3300005471 Bacteria 1153
13 Ga0070699_100635314 3300005518 Bacteria 974
14 Ga0070679_100043580 3300005530 Bacteria 4469
15 Ga0070679_100339349 3300005530 Bacteria 1451
16 Ga0070672_100000994 3300005543 Bacteria 17139
17 Ga0070696_100033402 3300005546 Bacteria 3535
18 Ga0070704_100486098 3300005549 Bacteria 1069
19 Ga0068855_100001460 3300005563 Bacteria 29509
20 Ga0068854_100100655 3300005578 Bacteria 2166
21 Ga0068856_100002373 3300005614 Bacteria 19382
22 Ga0068859_100297507 3300005617 Bacteria 1707
23 Ga0068858_100155391 3300005842 Bacteria 2152
24 Ga0068860_100038250 3300005843 Bacteria 4590
25 Ga0068860_100331361 3300005843 Bacteria 1495
26 Ga0068862_101048959 3300005844 Bacteria 808
27 Ga0070717_10025957 3300006028 Bacteria 4670
28 Ga0075366_10002129 3300006195 Bacteria 10070
29 Ga0075431_100097543 3300006847 Bacteria 3035
30 Ga0075429_100011052 3300006880 Bacteria 7814
31 Ga0075429_100043203 3300006880 Bacteria 3922
32 Ga0075429_100304830 3300006880 Bacteria 1395
33 Ga0097620_100297503 3300006931 Bacteria 1707
34 Ga0075435_100022875 3300007076 Bacteria 4825
35 Ga0105240_10773646 3300009093 Bacteria 1042
36 Ga0111539_10020261 3300009094 Bacteria 8195
37 Ga0105247_10368134 3300009101 Bacteria 1015
38 Ga0114129_11140162 3300009147 Bacteria 974
39 Ga0157371_10026793 3300013102 Bacteria 4187
40 Ga0157371_10040490 3300013102 Bacteria 3327
41 Ga0157379_10132548 3300014968 Bacteria 2243
42 Ga0157376_10157299 3300014969 Bacteria 2056
43 Ga0213875_10000298 3300021388 Bacteria 47640
44 Ga0207710_10128794 3300025900 Bacteria 1214
45 Ga0207685_10183303 3300025905 Bacteria 972
46 Ga0207707_10582376 3300025912 Bacteria 948
47 Ga0207695_10490458 3300025913 Bacteria 1111
48 Ga0207663_10070941 3300025916 Bacteria 2246
49 Ga0207652_10105084 3300025921 Unclassified 2498
50 Ga0207646_10020237 3300025922 Bacteria 6168
51 Ga0207646_10094328 3300025922 Bacteria 2680
52 Ga0207659_10114581 3300025926 Bacteria 2055
53 Ga0207700_10569467 3300025928 Bacteria 1006
54 Ga0207691_10001247 3300025940 Bacteria 25432
55 Ga0207667_10003309 3300025949 Bacteria 19883
56 Ga0268265_10718077 3300028380 Bacteria 967
57 Ga0268264_10256510 3300028381 Bacteria 1627
58 Ga0265319_1000101 3300028563 Bacteria 66582
59 Ga0265318_10000112 3300028577 Bacteria 75202
60 Ga0265318_10000308 3300028577 Bacteria 39339
61 Ga0265338_10025367 3300028800 Bacteria 6018
62 Ga0265338_10152601 3300028800 Bacteria 1793
63 Ga0265330_10000056 3300031235 Bacteria 100283
64 Ga0265332_10000050 3300031238 Bacteria 112449
65 Ga0265328_10069759 3300031239 Bacteria 1292
66 Ga0265320_10000115 3300031240 Bacteria 69750
67 Ga0265325_10000837 3300031241 Bacteria 22269
68 Ga0265340_10000304 3300031247 Bacteria 25822
69 Ga0265340_10007690 3300031247 Bacteria 5843
70 Ga0265339_10006805 3300031249 Bacteria 7457
71 Ga0265331_10000335 3300031250 Bacteria 50304
72 Ga0265316_10000321 3300031344 Bacteria 53243
73 Ga0265316_10007855 3300031344 Bacteria 9985
74 Ga0307513_10113745 3300031456 Bacteria 2693
75 Ga0307408_100581217 3300031548 Bacteria 993
76 Ga0265313_10000038 3300031595 Bacteria 122517
77 Ga0265313_10000373 3300031595 Bacteria 48523
78 Ga0307508_10153600 3300031616 Bacteria 1906
79 Ga0316575_10015724 3300031665 Bacteria 2855
80 Ga0265314_10000568 3300031711 Bacteria 46941
81 Ga0265342_10000810 3300031712 Bacteria 31389
82 Ga0265342_10059144 3300031712 Bacteria 2264
83 Ga0316576_10007110 3300031727 Bacteria 7016
84 Ga0316576_10086509 3300031727 Bacteria 2331
85 Ga0316576_10207767 3300031727 Bacteria 1474
86 Ga0316578_10088247 3300031728 Bacteria 1850
87 Ga0316578_10176406 3300031728 Bacteria 1288
88 Ga0307406_10029061 3300031901 Bacteria 3344
89 Ga0316583_10005260 3300032133 Bacteria 4641
90 Ga0316583_10022247 3300032133 Bacteria 2270
91 Ga0316583_10023677 3300032133 Bacteria 2192
92 Ga0307507_10048976 3300033179 Bacteria 4103
93 Ga0373939_0133479 3300035114 Bacteria 888
94 Ga0373945_0217356 3300035116 Bacteria 798
95 Ga0373956_0061561 3300035119 Bacteria 1700
96 Ga0373957_0016024 3300035120 Bacteria 2589
97 Ga0373955_0014697 3300035172 Bacteria 3815
98 Ga0316574_0039501 3300035398 Bacteria 2902
99 Ga0373935_0082986 3300035692 Bacteria 2086
100 Ga0373927_0034040 3300035695 Bacteria 3315
101 Ga0373933_0190303 3300035724 Bacteria 1310
102 Ga0373937_0106219 3300036401 Bacteria 2610
103 Ga0373937_0114026 3300036401 Bacteria 2515
104 Ga0373937_0316397 3300036401 Bacteria 1477
105 Ga0373937_0594332 3300036401 Bacteria 1051
106 Ga0316582_0299406 3300036647 Bacteria 1105
107 Ga0316584_0154905 3300036712 Bacteria 1704
108 Ga0373925_0040970 3300037068 Bacteria 3431
109 Ga0395905_0023800 3300037471 Bacteria 5783
110 Ga0436364_0266271 3300037853 Bacteria 210347
111 Ga0436364_0948173 3300037853 Bacteria 1146
112 Ga0436361_0050393 3300039447 Bacteria 890
113 Ga0436361_0503037 3300039447 Bacteria 582
114 Ga0436363_0539370 3300039450 Bacteria 1827
115 Ga0451791_0269314 3300041451 Bacteria 1021
116 Ga0451853_2503893 3300041512 Bacteria 950
117 Ga0439445_0029704 3300042004 Bacteria 1414
118 Ga0450898_029882 3300042134 Bacteria 995
119 Ga0451577_0030438 3300042876 Bacteria 4878
120 Ga0451577_0182991 3300042876 Bacteria 1889
121 Ga0451577_0271672 3300042876 Bacteria 1535
122 Ga0451577_0296898 3300042876 Bacteria 1464
123 Ga0453683_0057702 3300044673 Bacteria 2428
124 Ga0453684_0000309 3300044712 Bacteria 207063
125 Ga0453684_0005295 3300044712 Bacteria 25736
126 Ga0453684_0198663 3300044712 Bacteria 2339
127 Ga0453684_0379130 3300044712 Unclassified 1588
128 Ga0466957_0073074 3300044842 Bacteria 2125
129 Ga0451576_0133844 3300045051 Bacteria 2584
130 Ga0451576_0564740 3300045051 Bacteria 1195
131 Ga0451576_1210189 3300045051 Bacteria 789
132 Ga0495651_0048840 3300046462 Bacteria 3267
133 Ga0495653_0016642 3300046463 Bacteria 5984
134 Ga0495650_0000007 3300046471 Bacteria 718072
135 Ga0495580_0007891 3300046472 Bacteria 8515
136 Ga0495582_0058151 3300046473 Bacteria 2132
137 Ga0495639_0035275 3300046475 Bacteria 2238
138 Ga0495664_0004532 3300046477 Bacteria 7599
139 Ga0495594_0022229 3300046499 Bacteria 3391
140 Ga0495608_0265638 3300046511 Bacteria 1067
141 Ga0495616_0028407 3300046513 Bacteria 2962
142 Ga0495618_0051013 3300046514 Bacteria 2614
143 Ga0495628_0015549 3300046516 Bacteria 6354
144 Ga0495637_0005376 3300046520 Bacteria 6541
145 Ga0495648_0011411 3300046524 Bacteria 6693
146 Ga0495652_0007209 3300046529 Bacteria 10263
147 Ga0495654_0000054 3300046530 Bacteria 144303
148 Ga0495665_0001552 3300046531 Bacteria 12259
149 Ga0495587_0003793 3300046536 Bacteria 10029
150 Ga0495645_0019085 3300046543 Bacteria 4935
151 Ga0495667_0007480 3300046559 Bacteria 7406
152 Ga0495625_0003594 3300046660 Bacteria 15253
153 Ga0495625_0006660 3300046660 Bacteria 10247
154 Ga0495635_0062715 3300046663 Bacteria 2553
155 Ga0495599_0000259 3300046678 Bacteria 33415
156 Ga0495623_0016008 3300046679 Bacteria 4847
157 Ga0495646_0038071 3300046680 Bacteria 2971
158 Ga0495613_0232815 3300046689 Bacteria 1290
159 Ga0495600_0467984 3300046809 Bacteria 778
160 Ga0495604_0149878 3300047317 Bacteria 1658
161 Ga0495636_0004029 3300047318 Bacteria 5746
162 Ga0495674_0126093 3300047319 Bacteria 2160
163 Ga0495680_0110979 3300047322 Bacteria 2032
164 Ga0495675_0052988 3300047444 Bacteria 2575
165 Ga0495684_0047735 3300047471 Bacteria 3274
166 Ga0495602_0037102 3300048088 Bacteria 4527
167 Ga0495615_0014714 3300048090 Bacteria 1659
168 Ga0496101_0115907 3300048904 Bacteria 2021
169 Ga0496104_0243061 3300048907 Bacteria 1712
170 Ga0496106_0012790 3300048909 Bacteria 6196
171 Ga0496107_0000072 3300048910 Bacteria 48700
172 Ga0496116_0127975 3300048919 Bacteria 1454
173 Ga0496121_0000625 3300048924 Bacteria 65948
174 Ga0501034_0054610 3300049571 Bacteria 4021
175 Ga0501080_0033606 3300049742 Bacteria 4787
176 nmdc:mga0k408_1201_c1 3300050493 Bacteria 14176
177 nmdc:mga05p37_872535_c1 3300050507 Bacteria 974
178 nmdc:mga09592_15002_c1 3300050508 Bacteria 6329
179 nmdc:mga06r32_19800_c1 3300050510 Bacteria 6184
180 nmdc:mga08y16_329553_c1 3300050511 Bacteria 1571
181 nmdc:mga0rr50_3214_c1 3300050513 Bacteria 9354
182 nmdc:mga08x19_757378_c1 3300050514 Bacteria 689
183 Ga0495601_0039277 3300053077 Bacteria 2964
184 Ga0495612_0134599 3300053078 Bacteria 1069
185 Ga0495595_0029790 3300053084 Bacteria 2445
186 Ga0500556_0000186 3300053104 Bacteria 50723
187 Ga0500627_0012321 3300053158 Bacteria 3199
188 Ga0500645_000149 3300053730 Bacteria 54622

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050514 nmdc:mga08x19_757378_c1 nmdc:mga08x19_757378_c1_95_676 173
2 3300039447 Ga0436361_0503037 Ga0436361_0503037_10_558 178
3 3300045051 Ga0451576_1210189 Ga0451576_1210189_19_591 183
4 3300039447 Ga0436361_0050393 Ga0436361_0050393_89_808 212
5 iso_pu_bacteria 2738541299 2738837596 214
6 iso_pu_bacteria 2852673933 2852674957 214
7 iso_pu_bacteria 2928510474 2928511670 214
8 3300032133 Ga0316583_10023677 Ga0316583_100236772 215
9 3300005337 Ga0070682_100102465 Ga0070682_1001024652 216
10 3300005843 Ga0068860_100331361 Ga0068860_1003313612 216
11 3300005844 Ga0068862_101048959 Ga0068862_1010489591 216
12 3300028381 Ga0268264_10256510 Ga0268264_102565102 216
13 3300028577 Ga0265318_10000308 Ga0265318_1000030827 216
14 3300028800 Ga0265338_10025367 Ga0265338_100253677 216
15 3300031239 Ga0265328_10069759 Ga0265328_100697591 216
16 3300031241 Ga0265325_10000837 Ga0265325_1000083711 216
17 3300031247 Ga0265340_10007690 Ga0265340_100076903 216
18 3300031344 Ga0265316_10000321 Ga0265316_1000032123 216
19 3300031595 Ga0265313_10000373 Ga0265313_1000037319 216
20 3300031712 Ga0265342_10059144 Ga0265342_100591442 216
21 3300042134 Ga0450898_029882 Ga0450898_029882_101_754 216
22 3300047318 Ga0495636_0004029 Ga0495636_0004029_4805_5455 216
23 3300048090 Ga0495615_0014714 Ga0495615_0014714_132_782 216
24 3300005843 Ga0068860_100038250 Ga0068860_1000382504 217
25 3300006880 Ga0075429_100043203 Ga0075429_1000432032 217
26 3300009101 Ga0105247_10368134 Ga0105247_103681342 217
27 3300009147 Ga0114129_11140162 Ga0114129_111401621 217
28 3300013102 Ga0157371_10026793 Ga0157371_100267932 217
29 3300013102 Ga0157371_10040490 Ga0157371_100404903 217
30 3300025900 Ga0207710_10128794 Ga0207710_101287942 217
31 3300031548 Ga0307408_100581217 Ga0307408_1005812171 217
32 3300042876 Ga0451577_0030438 Ga0451577_0030438_3788_4447 217
33 3300042876 Ga0451577_0296898 Ga0451577_0296898_624_1283 217
34 3300044712 Ga0453684_0198663 Ga0453684_0198663_1249_1908 217
35 3300045051 Ga0451576_0564740 Ga0451576_0564740_164_823 217
36 3300050507 nmdc:mga05p37_872535_c1 nmdc:mga05p37_872535_c1_68_745 217
37 3300050508 nmdc:mga09592_15002_c1 nmdc:mga09592_15002_c1_5611_6273 217
38 3300005458 Ga0070681_10915070 Ga0070681_109150701 218
39 3300005518 Ga0070699_100635314 Ga0070699_1006353141 218
40 3300005530 Ga0070679_100043580 Ga0070679_1000435803 218
41 3300005530 Ga0070679_100339349 Ga0070679_1003393491 218
42 3300005546 Ga0070696_100033402 Ga0070696_1000334022 218
43 3300005842 Ga0068858_100155391 Ga0068858_1001553912 218
44 3300014968 Ga0157379_10132548 Ga0157379_101325482 218
45 3300014969 Ga0157376_10157299 Ga0157376_101572992 218
46 3300025905 Ga0207685_10183303 Ga0207685_101833032 218
47 3300025912 Ga0207707_10582376 Ga0207707_105823762 218
48 3300025916 Ga0207663_10070941 Ga0207663_100709412 218
49 3300025921 Ga0207652_10105084 Ga0207652_101050842 218
50 3300025922 Ga0207646_10020237 Ga0207646_100202372 218
51 3300025928 Ga0207700_10569467 Ga0207700_105694672 218
52 3300031616 Ga0307508_10153600 Ga0307508_101536003 218
53 3300031665 Ga0316575_10015724 Ga0316575_100157243 218
54 3300032133 Ga0316583_10005260 Ga0316583_100052603 218
55 3300032133 Ga0316583_10022247 Ga0316583_100222471 218
56 3300035119 Ga0373956_0061561 Ga0373956_0061561_264_929 218
57 3300035120 Ga0373957_0016024 Ga0373957_0016024_519_1184 218
58 3300035172 Ga0373955_0014697 Ga0373955_0014697_543_1208 218
59 3300035692 Ga0373935_0082986 Ga0373935_0082986_28_693 218
60 3300035695 Ga0373927_0034040 Ga0373927_0034040_257_922 218
61 3300035724 Ga0373933_0190303 Ga0373933_0190303_360_1025 218
62 3300036401 Ga0373937_0114026 Ga0373937_0114026_1586_2251 218
63 3300037068 Ga0373925_0040970 Ga0373925_0040970_1378_2043 218
64 3300044712 Ga0453684_0379130 Ga0453684_0379130_96_758 218
65 3300046462 Ga0495651_0048840 Ga0495651_0048840_973_1638 218
66 3300046463 Ga0495653_0016642 Ga0495653_0016642_2786_3451 218
67 3300046471 Ga0495650_0000007 Ga0495650_0000007_344512_345177 218
68 3300046472 Ga0495580_0007891 Ga0495580_0007891_3846_4511 218
69 3300046473 Ga0495582_0058151 Ga0495582_0058151_1411_2076 218
70 3300046475 Ga0495639_0035275 Ga0495639_0035275_1059_1724 218
71 3300046477 Ga0495664_0004532 Ga0495664_0004532_5219_5884 218
72 3300046499 Ga0495594_0022229 Ga0495594_0022229_2442_3107 218
73 3300046511 Ga0495608_0265638 Ga0495608_0265638_204_869 218
74 3300046513 Ga0495616_0028407 Ga0495616_0028407_452_1117 218
75 3300046514 Ga0495618_0051013 Ga0495618_0051013_1781_2446 218
76 3300046516 Ga0495628_0015549 Ga0495628_0015549_2208_2873 218
77 3300046520 Ga0495637_0005376 Ga0495637_0005376_74_739 218
78 3300046524 Ga0495648_0011411 Ga0495648_0011411_3563_4228 218
79 3300046529 Ga0495652_0007209 Ga0495652_0007209_2446_3111 218
80 3300046530 Ga0495654_0000054 Ga0495654_0000054_102436_103101 218
81 3300046531 Ga0495665_0001552 Ga0495665_0001552_10518_11183 218
82 3300046536 Ga0495587_0003793 Ga0495587_0003793_9045_9710 218
83 3300046543 Ga0495645_0019085 Ga0495645_0019085_2502_3167 218
84 3300046559 Ga0495667_0007480 Ga0495667_0007480_3013_3678 218
85 3300046660 Ga0495625_0003594 Ga0495625_0003594_10681_11346 218
86 3300046660 Ga0495625_0006660 Ga0495625_0006660_8269_8934 218
87 3300046663 Ga0495635_0062715 Ga0495635_0062715_1669_2334 218
88 3300046678 Ga0495599_0000259 Ga0495599_0000259_3359_4024 218
89 3300046679 Ga0495623_0016008 Ga0495623_0016008_1872_2537 218
90 3300046680 Ga0495646_0038071 Ga0495646_0038071_106_771 218
91 3300046689 Ga0495613_0232815 Ga0495613_0232815_531_1196 218
92 3300046809 Ga0495600_0467984 Ga0495600_0467984_68_733 218
93 3300047317 Ga0495604_0149878 Ga0495604_0149878_465_1130 218
94 3300047319 Ga0495674_0126093 Ga0495674_0126093_715_1380 218
95 3300047322 Ga0495680_0110979 Ga0495680_0110979_487_1152 218
96 3300047444 Ga0495675_0052988 Ga0495675_0052988_1604_2269 218
97 3300047471 Ga0495684_0047735 Ga0495684_0047735_2522_3187 218
98 3300048088 Ga0495602_0037102 Ga0495602_0037102_1284_1949 218
99 3300048904 Ga0496101_0115907 Ga0496101_0115907_1251_1916 218
100 3300048907 Ga0496104_0243061 Ga0496104_0243061_101_766 218
101 3300048909 Ga0496106_0012790 Ga0496106_0012790_4528_5193 218
102 3300048910 Ga0496107_0000072 Ga0496107_0000072_299_964 218
103 3300048924 Ga0496121_0000625 Ga0496121_0000625_37579_38244 218
104 3300050510 nmdc:mga06r32_19800_c1 nmdc:mga06r32_19800_c1_189_848 218
105 3300053077 Ga0495601_0039277 Ga0495601_0039277_392_1057 218
106 3300053078 Ga0495612_0134599 Ga0495612_0134599_350_1015 218
107 3300053084 Ga0495595_0029790 Ga0495595_0029790_328_993 218
108 3300053104 Ga0500556_0000186 Ga0500556_0000186_28810_29475 218
109 3300053158 Ga0500627_0012321 Ga0500627_0012321_1865_2530 218
110 3300053730 Ga0500645_000149 Ga0500645_000149_6085_6750 218
111 3300006847 Ga0075431_100097543 Ga0075431_1000975432 219
112 3300037471 Ga0395905_0023800 Ga0395905_0023800_4964_5626 219
113 3300005329 Ga0070683_100184046 Ga0070683_1001840462 220
114 3300005471 Ga0070698_100500566 Ga0070698_1005005661 220
115 3300005563 Ga0068855_100001460 Ga0068855_10000146021 220
116 3300005614 Ga0068856_100002373 Ga0068856_10000237310 220
117 3300005617 Ga0068859_100297507 Ga0068859_1002975072 220
118 3300006028 Ga0070717_10025957 Ga0070717_100259573 220
119 3300006880 Ga0075429_100304830 Ga0075429_1003048302 220
120 3300006931 Ga0097620_100297503 Ga0097620_1002975032 220
121 3300007076 Ga0075435_100022875 Ga0075435_1000228752 220
122 3300021388 Ga0213875_10000298 Ga0213875_1000029811 220
123 3300025949 Ga0207667_10003309 Ga0207667_100033099 220
124 3300028380 Ga0268265_10718077 Ga0268265_107180772 220
125 3300031727 Ga0316576_10086509 Ga0316576_100865093 220
126 3300031727 Ga0316576_10207767 Ga0316576_102077672 220
127 3300031728 Ga0316578_10088247 Ga0316578_100882472 220
128 3300035116 Ga0373945_0217356 Ga0373945_0217356_91_759 220
129 3300036401 Ga0373937_0316397 Ga0373937_0316397_106_810 220
130 3300036401 Ga0373937_0594332 Ga0373937_0594332_39_707 220
131 3300036647 Ga0316582_0299406 Ga0316582_0299406_132_824 220
132 3300037853 Ga0436364_0266271 Ga0436364_0266271_207549_208232 220
133 3300039450 Ga0436363_0539370 Ga0436363_0539370_677_1399 220
134 3300042876 Ga0451577_0182991 Ga0451577_0182991_1185_1859 220
135 3300042876 Ga0451577_0271672 Ga0451577_0271672_401_1072 220
136 3300044673 Ga0453683_0057702 Ga0453683_0057702_783_1463 220
137 3300044712 Ga0453684_0000309 Ga0453684_0000309_30866_31546 220
138 3300044712 Ga0453684_0005295 Ga0453684_0005295_8361_9032 220
139 3300044842 Ga0466957_0073074 Ga0466957_0073074_1064_1741 220
140 3300045051 Ga0451576_0133844 Ga0451576_0133844_1428_2108 220
141 3300050513 nmdc:mga0rr50_3214_c1 nmdc:mga0rr50_3214_c1_6993_7682 220
142 3300005354 Ga0070675_100247266 Ga0070675_1002472662 221
143 3300005468 Ga0070707_100112391 Ga0070707_1001123912 221
144 3300005543 Ga0070672_100000994 Ga0070672_1000009948 221
145 3300025922 Ga0207646_10094328 Ga0207646_100943282 221
146 3300025926 Ga0207659_10114581 Ga0207659_101145813 221
147 3300025940 Ga0207691_10001247 Ga0207691_100012479 221
148 3300031727 Ga0316576_10007110 Ga0316576_100071103 221
149 3300031728 Ga0316578_10176406 Ga0316578_101764062 221
150 3300036712 Ga0316584_0154905 Ga0316584_0154905_954_1637 221
151 3300005337 Ga0070682_100007095 Ga0070682_1000070952 222
152 3300005578 Ga0068854_100100655 Ga0068854_1001006552 222
153 3300006880 Ga0075429_100011052 Ga0075429_1000110522 222
154 3300031901 Ga0307406_10029061 Ga0307406_100290615 222
155 3300041512 Ga0451853_2503893 Ga0451853_2503893_91_759 222
156 3300042004 Ga0439445_0029704 Ga0439445_0029704_53_790 222
157 3300005440 Ga0070705_100067034 Ga0070705_1000670342 223
158 3300005549 Ga0070704_100486098 Ga0070704_1004860981 223
159 3300009094 Ga0111539_10020261 Ga0111539_100202615 223
160 3300033179 Ga0307507_10048976 Ga0307507_100489763 223
161 3300035114 Ga0373939_0133479 Ga0373939_0133479_127_822 223
162 3300036401 Ga0373937_0106219 Ga0373937_0106219_891_1589 223
163 3300037853 Ga0436364_0948173 Ga0436364_0948173_378_1109 223
164 3300041451 Ga0451791_0269314 Ga0451791_0269314_88_762 223
165 3300048919 Ga0496116_0127975 Ga0496116_0127975_604_1293 223
166 3300050511 nmdc:mga08y16_329553_c1 nmdc:mga08y16_329553_c1_291_989 223
167 3300006195 Ga0075366_10002129 Ga0075366_100021293 224
168 3300035398 Ga0316574_0039501 Ga0316574_0039501_1587_2333 224
169 3300050493 nmdc:mga0k408_1201_c1 nmdc:mga0k408_1201_c1_12642_13385 224
170 3300003320 rootH2_10073381 rootH2_100733818 225
171 3300003322 rootL2_10033788 rootL2_100337883 225
172 3300003323 rootH1_10092676 rootH1_100926763 225
173 3300003323 rootH1_10107607 rootH1_101076071 225
174 3300009093 Ga0105240_10773646 Ga0105240_107736461 225
175 3300025913 Ga0207695_10490458 Ga0207695_104904582 225
176 3300028563 Ga0265319_1000101 Ga0265319_10001013 225
177 3300028577 Ga0265318_10000112 Ga0265318_1000011223 225
178 3300028800 Ga0265338_10152601 Ga0265338_101526013 225
179 3300031235 Ga0265330_10000056 Ga0265330_100000564 225
180 3300031238 Ga0265332_10000050 Ga0265332_100000508 225
181 3300031240 Ga0265320_10000115 Ga0265320_1000011526 225
182 3300031247 Ga0265340_10000304 Ga0265340_1000030416 225
183 3300031249 Ga0265339_10006805 Ga0265339_100068059 225
184 3300031250 Ga0265331_10000335 Ga0265331_1000033536 225
185 3300031344 Ga0265316_10007855 Ga0265316_100078555 225
186 3300031456 Ga0307513_10113745 Ga0307513_101137455 225
187 3300031595 Ga0265313_10000038 Ga0265313_1000003812 225
188 3300031711 Ga0265314_10000568 Ga0265314_100005687 225
189 3300031712 Ga0265342_10000810 Ga0265342_1000081010 225
190 3300049571 Ga0501034_0054610 Ga0501034_0054610_2574_3317 225
191 3300049742 Ga0501080_0033606 Ga0501080_0033606_3020_3721 225

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00834

Ribul_P_3_epim

Ribulose-phosphate 3 epimerase family

35

232

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sbj-assembly1.cif.gz_C crystal structure of ribulose-phosphate 3-epimerase from stenotrophomonas maltophilia k279a 0.9806 10 223
2fli-assembly1.cif.gz_E the crystal structure of d-ribulose 5-phosphate 3-epimerase from streptococus pyogenes complexed with d-xylitol 5-phosphate 0.9782 8 222
1rpx-assembly1.cif.gz_A d-ribulose-5-phosphate 3-epimerase from solanum tuberosum chloroplasts 0.9767 8 222
1tqj-assembly1.cif.gz_D crystal structure of d-ribulose 5-phosphate 3-epimerase from synechocystis to 1.6 angstrom resolution 0.9764 7 220
1tqj-assembly1.cif.gz_F crystal structure of d-ribulose 5-phosphate 3-epimerase from synechocystis to 1.6 angstrom resolution 0.9759 7 222
ID Description Score Start End Superfamily
af_P0AG07_1_223_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9795 7 222 3.20.20.70
2fliC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.978 8 222 3.20.20.70
1tqjD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9764 7 220 3.20.20.70
af_Q58093_1_217_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9746 8 223 3.20.20.70
af_A0A1D6PJ99_41_293_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9635 8 215 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A847F4W9-F1-model_v4 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.9884 7 220 GO:0004750
GO:0006098
GO:0019323
GO:0046872
AF-A0A7C7ZVP7-F1-model_v4 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.9863 8 222 GO:0004750
GO:0006098
GO:0019323
GO:0046872
AF-A0A661NUS9-F1-model_v4 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.986 7 223 GO:0004750
GO:0006098
GO:0019323
GO:0046872
AF-A0A2T5V3H4-F1-model_v4 deleted 0.9852 8 220
AF-A0A1G6NA90-F1-model_v4 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 0.9851 8 224 GO:0004750
GO:0006098
GO:0019323
GO:0046872

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