F294100
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 191 | 155 | 382 | 250 |
Family's Representative Sequence
| Representative Sequence | 3300025294|Ga0209025_1023474|Ga0209025_10234743 |
| Length | 281 |
| Sequence | MRWSRPKSKNLWRFDGSTRPAMSSEPAIAAARVPRHLAVIMDGNGRWAERRRRPRVIGHRAGARAVNVCIDFCLDQGIEALTLFAFSSENWGRPEEEVGALMKLFLGALEREVDELDRRGVRVRFIGERERFADAIRKQMASAEDRTRANTRLHLTIAASYGGRWDIAQAARSLAQDVAAGRLAAEDIDEYAIGARTCLAELPAPDLFIRTGGETRISNFLLWQLAYTELWFTDLLWPELDAATLQRAMDDYAGRQRRFGLTGAQVAPAPSRLPATKETSE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 2 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 3 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 4 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 5 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 6 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 7 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 11 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 16 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 18 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 20 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 21 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 22 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 23 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 24 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 25 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 26 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 27 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 28 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 29 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 30 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300012512 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 | Metagenome | Rhizosphere |
| 34 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 40 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 41 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 42 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 43 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 44 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 47 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 74 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 75 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 76 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 77 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 78 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 79 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 80 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 81 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 82 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 83 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 84 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 85 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 86 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 87 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 88 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 89 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 90 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 91 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 92 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 93 | 3300041459 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG | Metagenome | Rhizoplane |
| 94 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 95 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 96 | 3300042184 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 | Metagenome | Rhizosphere |
| 97 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 98 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 107 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 108 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 109 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 110 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 112 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 113 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 114 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 115 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 116 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 117 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 118 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 123 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 125 | 3300059647 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 126 | 2510917027 | Brevibacillus sp. CF112 | Isolate | Rhizosphere |
| 127 | 2512564013 | Brevibacillus sp. BC25 | Isolate | Rhizosphere |
| 128 | 2571042365 | Lysobacter oryzae DSM 21044 | Isolate | Rhizosphere |
| 129 | 2593339238 | Luteibacter sp. UNCMF366Tsu5.1 | Isolate | Unclassified |
| 130 | 2643221559 | Lysobacter sp. Root559 | Isolate | Unclassified |
| 131 | 2643221573 | Lysobacter sp. Root604 | Isolate | Unclassified |
| 132 | 2643221586 | Lysobacter sp. Root667 | Isolate | Unclassified |
| 133 | 2643221612 | Lysobacter sp. Root76 | Isolate | Unclassified |
| 134 | 2643221695 | Lysobacter sp. Root494 | Isolate | Unclassified |
| 135 | 2643221720 | Lysobacter sp. Root916 | Isolate | Unclassified |
| 136 | 2643221727 | Lysobacter sp. Root96 | Isolate | Unclassified |
| 137 | 2643221728 | Lysobacter sp. Root983 | Isolate | Unclassified |
| 138 | 2831905167 | Ammoniphilus oxalaticus RAOx-1 | Isolate | Rhizosphere |
| 139 | 2857460504 | Brevibacillus sp. R-74223 | Isolate | Unclassified |
| 140 | 2857465823 | Brevibacillus sp. R-74266 | Isolate | Unclassified |
| 141 | 2857591370 | Brevibacillus sp. R-71934 | Isolate | Unclassified |
| 142 | 2865002811 | Paenibacillus sp. R-74131 | Isolate | Unclassified |
| 143 | 2888578766 | Paenibacillus lycopersici 12200R-189 | Isolate | Rhizosphere |
| 144 | 2889049205 | Paenibacillus rhizovicinus 14171R-81 | Isolate | Rhizosphere |
| 145 | 2890737413 | Parapedobacter sp. SGR-10 | Isolate | Rhizosphere |
| 146 | 2898713307 | Sphingobacterium sp. SGG-5 | Isolate | Rhizosphere |
| 147 | 2898907183 | Brevibacillus sp. SYP-B805 | Isolate | Rhizosphere |
| 148 | 2915597211 | Brevibacillus brevis Ag35 | Isolate | Nodule |
| 149 | 2915606848 | Brevibacillus sp. HD1.4A | Isolate | Rhizosphere |
| 150 | 2929183550 | Brevibacillus sp. R-71971 Hybrid assembly | Isolate | Unclassified |
| 151 | 2980182181 | Paenibacillus cymbidii R196 | Isolate | Unclassified |
| 152 | 2995948881 | Lysobacter enzymogenes B25 | Isolate | Unclassified |
| 153 | 8003014200 | Lysobacter changpingensis Cm-3-T8 | Isolate | Rhizosphere |
| 154 | 8057473075 | Paenibacillus endoradicis T3-5-0-4 | Isolate | Unclassified |
| 155 | 8057977335 | Paenibacillus oenotherae DT7-4 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 83.77 |
| Metatranscriptomes | 0.52 |
| Isolates | 15.71 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 16.75 |
| Nodule | 0.52 |
| Rhizoplane | 4.71 |
| Rhizosphere | 66.49 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0209025_1023474 | 3300025294 | Bacteria | 3221 |
| 2 | Ga0055532_1000736 | 3300003758 | Bacteria | 11948 |
| 3 | Ga0055526_1010879 | 3300003771 | Bacteria | 4177 |
| 4 | Ga0055524_1009650 | 3300003775 | Bacteria | 3903 |
| 5 | Ga0055524_1020236 | 3300003775 | Bacteria | 2249 |
| 6 | Ga0055536_1032411 | 3300003781 | Bacteria | 1351 |
| 7 | Ga0055530_10004028 | 3300003791 | Bacteria | 7894 |
| 8 | Ga0055531_10009526 | 3300003794 | Bacteria | 4956 |
| 9 | Ga0070676_10075888 | 3300005328 | Bacteria | 2028 |
| 10 | Ga0070670_100070163 | 3300005331 | Bacteria | 3008 |
| 11 | Ga0068869_100023045 | 3300005334 | Bacteria | 4295 |
| 12 | Ga0070675_100698593 | 3300005354 | Bacteria | 924 |
| 13 | Ga0070671_100725612 | 3300005355 | Bacteria | 863 |
| 14 | Ga0070673_100269201 | 3300005364 | Bacteria | 1491 |
| 15 | Ga0070673_100724188 | 3300005364 | Bacteria | 915 |
| 16 | Ga0070667_100444284 | 3300005367 | Bacteria | 1184 |
| 17 | Ga0068867_100017937 | 3300005459 | Bacteria | 5029 |
| 18 | Ga0070679_100071213 | 3300005530 | Bacteria | 3467 |
| 19 | Ga0068853_100010301 | 3300005539 | Bacteria | 7562 |
| 20 | Ga0070665_100099423 | 3300005548 | Bacteria | 2913 |
| 21 | Ga0070665_100158792 | 3300005548 | Bacteria | 2263 |
| 22 | Ga0068855_100420116 | 3300005563 | Bacteria | 1463 |
| 23 | Ga0068857_100075987 | 3300005577 | Bacteria | 2995 |
| 24 | Ga0068856_100006866 | 3300005614 | Bacteria | 11134 |
| 25 | Ga0068859_100001560 | 3300005617 | Bacteria | 23376 |
| 26 | Ga0068864_100500910 | 3300005618 | Bacteria | 1168 |
| 27 | Ga0068861_100028427 | 3300005719 | Bacteria | 4079 |
| 28 | Ga0068851_10148193 | 3300005834 | Bacteria | 1281 |
| 29 | Ga0068858_100140409 | 3300005842 | Bacteria | 2268 |
| 30 | Ga0068862_100009462 | 3300005844 | Bacteria | 8063 |
| 31 | Ga0075364_10000021 | 3300006051 | Bacteria | 53922 |
| 32 | Ga0068865_100112551 | 3300006881 | Bacteria | 2011 |
| 33 | Ga0097620_100001560 | 3300006931 | Bacteria | 23376 |
| 34 | Ga0105245_10037590 | 3300009098 | Bacteria | 4305 |
| 35 | Ga0105239_10287218 | 3300010375 | Bacteria | 1852 |
| 36 | Ga0157327_1002029 | 3300012512 | Bacteria | 1348 |
| 37 | Ga0157375_11160520 | 3300013308 | Bacteria | 905 |
| 38 | Ga0209674_100337 | 3300025226 | Bacteria | 28284 |
| 39 | Ga0209147_100053 | 3300025229 | Bacteria | 267615 |
| 40 | Ga0209437_100700 | 3300025233 | Bacteria | 17518 |
| 41 | Ga0209148_1001276 | 3300025254 | Bacteria | 13765 |
| 42 | Ga0209673_1003718 | 3300025273 | Bacteria | 8733 |
| 43 | Ga0209130_1006208 | 3300025284 | Bacteria | 3930 |
| 44 | Ga0209675_1008414 | 3300025291 | Bacteria | 3792 |
| 45 | Ga0209675_1024434 | 3300025291 | Bacteria | 1543 |
| 46 | Ga0209676_1001759 | 3300025292 | Bacteria | 18389 |
| 47 | Ga0209676_1034871 | 3300025292 | Bacteria | 1482 |
| 48 | Ga0209025_1005054 | 3300025294 | Bacteria | 10992 |
| 49 | Ga0209564_1014189 | 3300025295 | Bacteria | 3331 |
| 50 | Ga0209758_1014146 | 3300025297 | Bacteria | 4274 |
| 51 | Ga0209758_1038498 | 3300025297 | Bacteria | 1833 |
| 52 | Ga0209050_1000579 | 3300025298 | Bacteria | 59347 |
| 53 | Ga0209050_1015581 | 3300025298 | Bacteria | 3179 |
| 54 | Ga0209256_1002532 | 3300025299 | Bacteria | 14652 |
| 55 | Ga0209256_1006837 | 3300025299 | Bacteria | 5872 |
| 56 | Ga0209257_1000148 | 3300025304 | Bacteria | 193131 |
| 57 | Ga0209257_1001190 | 3300025304 | Bacteria | 32758 |
| 58 | Ga0209257_1016289 | 3300025304 | Bacteria | 3016 |
| 59 | Ga0209257_1022318 | 3300025304 | Bacteria | 2261 |
| 60 | Ga0207656_10114866 | 3300025321 | Bacteria | 1248 |
| 61 | Ga0207645_10040495 | 3300025907 | Bacteria | 2983 |
| 62 | Ga0207707_10099179 | 3300025912 | Bacteria | 2546 |
| 63 | Ga0207649_10182844 | 3300025920 | Bacteria | 1468 |
| 64 | Ga0207652_10108509 | 3300025921 | Bacteria | 2460 |
| 65 | Ga0207650_10082058 | 3300025925 | Bacteria | 2446 |
| 66 | Ga0207687_10138717 | 3300025927 | Bacteria | 1842 |
| 67 | Ga0207704_10146762 | 3300025938 | Bacteria | 1658 |
| 68 | Ga0207691_10077311 | 3300025940 | Bacteria | 2999 |
| 69 | Ga0207689_10026719 | 3300025942 | Bacteria | 4835 |
| 70 | Ga0207667_10464292 | 3300025949 | Bacteria | 1286 |
| 71 | Ga0207651_10081575 | 3300025960 | Bacteria | 2332 |
| 72 | Ga0207668_10017625 | 3300025972 | Bacteria | 4477 |
| 73 | Ga0207658_10028463 | 3300025986 | Bacteria | 3935 |
| 74 | Ga0207703_10089870 | 3300026035 | Bacteria | 2580 |
| 75 | Ga0207639_10180708 | 3300026041 | Bacteria | 1794 |
| 76 | Ga0207702_10001298 | 3300026078 | Bacteria | 25025 |
| 77 | Ga0207641_10103212 | 3300026088 | Bacteria | 2515 |
| 78 | Ga0207648_10024934 | 3300026089 | Bacteria | 5331 |
| 79 | Ga0207674_10088324 | 3300026116 | Bacteria | 3093 |
| 80 | Ga0207675_100022934 | 3300026118 | Bacteria | 5806 |
| 81 | Ga0207675_100187428 | 3300026118 | Bacteria | 1983 |
| 82 | Ga0207698_10392900 | 3300026142 | Bacteria | 1323 |
| 83 | Ga0268266_10159106 | 3300028379 | Bacteria | 2042 |
| 84 | Ga0268265_10000196 | 3300028380 | Bacteria | 70684 |
| 85 | Ga0268265_10217466 | 3300028380 | Bacteria | 1669 |
| 86 | Ga0268264_10015787 | 3300028381 | Bacteria | 6183 |
| 87 | Ga0316575_10005490 | 3300031665 | Bacteria | 4526 |
| 88 | Ga0316576_10008580 | 3300031727 | Bacteria | 6532 |
| 89 | Ga0316576_10019931 | 3300031727 | Bacteria | 4603 |
| 90 | Ga0316576_10178881 | 3300031727 | Bacteria | 1600 |
| 91 | Ga0307405_10152229 | 3300031731 | Bacteria | 1628 |
| 92 | Ga0307413_10041805 | 3300031824 | Bacteria | 2687 |
| 93 | Ga0307413_10491713 | 3300031824 | Bacteria | 983 |
| 94 | Ga0307410_10084534 | 3300031852 | Bacteria | 2237 |
| 95 | Ga0307406_10037387 | 3300031901 | Bacteria | 2998 |
| 96 | Ga0307406_10226067 | 3300031901 | Bacteria | 1394 |
| 97 | Ga0307407_10123612 | 3300031903 | Bacteria | 1644 |
| 98 | Ga0307412_10429697 | 3300031911 | Bacteria | 1082 |
| 99 | Ga0307412_10475739 | 3300031911 | Bacteria | 1035 |
| 100 | Ga0307409_100310408 | 3300031995 | Bacteria | 1471 |
| 101 | Ga0307414_10009976 | 3300032004 | Bacteria | 5483 |
| 102 | Ga0307414_10029824 | 3300032004 | Bacteria | 3555 |
| 103 | Ga0307414_10216749 | 3300032004 | Bacteria | 1568 |
| 104 | Ga0307414_10226807 | 3300032004 | Bacteria | 1537 |
| 105 | Ga0307411_10427015 | 3300032005 | Bacteria | 1102 |
| 106 | Ga0307411_10537982 | 3300032005 | Bacteria | 994 |
| 107 | Ga0316583_10002884 | 3300032133 | Bacteria | 6036 |
| 108 | Ga0316580_10006077 | 3300032139 | Bacteria | 3548 |
| 109 | Ga0316574_0013331 | 3300035398 | Bacteria | 4721 |
| 110 | Ga0316582_0360426 | 3300036647 | Bacteria | 1000 |
| 111 | Ga0316584_0124420 | 3300036712 | Bacteria | 1926 |
| 112 | Ga0395905_0552137 | 3300037471 | Bacteria | 1053 |
| 113 | Ga0439436_0003751 | 3300041404 | Bacteria | 4640 |
| 114 | Ga0439436_0010728 | 3300041404 | Bacteria | 2792 |
| 115 | Ga0439436_0045308 | 3300041404 | Bacteria | 1252 |
| 116 | Ga0439439_0001166 | 3300041406 | Bacteria | 5059 |
| 117 | Ga0439439_0047466 | 3300041406 | Bacteria | 1122 |
| 118 | Ga0439465_0017109 | 3300041413 | Bacteria | 2262 |
| 119 | Ga0451800_0869769 | 3300041459 | Bacteria | 1654 |
| 120 | Ga0439449_0000070 | 3300042007 | Bacteria | 32061 |
| 121 | Ga0439449_0005125 | 3300042007 | Bacteria | 5039 |
| 122 | Ga0439449_0145929 | 3300042007 | Bacteria | 882 |
| 123 | Ga0439462_0000390 | 3300042015 | Bacteria | 8443 |
| 124 | Ga0450908_000156 | 3300042184 | Bacteria | 14202 |
| 125 | Ga0466959_0067879 | 3300045049 | Bacteria | 2584 |
| 126 | Ga0495638_0066615 | 3300046460 | Bacteria | 2213 |
| 127 | Ga0495663_0021104 | 3300046525 | Bacteria | 1874 |
| 128 | Ga0495663_0038310 | 3300046525 | Bacteria | 1448 |
| 129 | Ga0495621_0000034 | 3300046539 | Bacteria | 26649 |
| 130 | Ga0495621_0015621 | 3300046539 | Bacteria | 2424 |
| 131 | Ga0495656_0000437 | 3300046615 | Bacteria | 13607 |
| 132 | Ga0495656_0018294 | 3300046615 | Bacteria | 2687 |
| 133 | Ga0495668_0031993 | 3300046616 | Bacteria | 2962 |
| 134 | Ga0495649_0267619 | 3300046694 | Bacteria | 875 |
| 135 | Ga0495636_0000787 | 3300047318 | Bacteria | 11672 |
| 136 | Ga0495636_0002356 | 3300047318 | Bacteria | 7254 |
| 137 | Ga0495636_0014676 | 3300047318 | Bacteria | 3117 |
| 138 | Ga0495636_0041246 | 3300047318 | Bacteria | 1915 |
| 139 | Ga0495685_121027 | 3300047447 | Bacteria | 859 |
| 140 | Ga0496100_0072250 | 3300048903 | Bacteria | 2306 |
| 141 | Ga0496103_0075211 | 3300048906 | Bacteria | 2118 |
| 142 | Ga0496106_0119910 | 3300048909 | Bacteria | 2055 |
| 143 | Ga0496107_0183362 | 3300048910 | Bacteria | 1554 |
| 144 | Ga0496108_0114841 | 3300048911 | Bacteria | 2305 |
| 145 | Ga0496111_0002420 | 3300048914 | Bacteria | 11262 |
| 146 | Ga0496113_0032831 | 3300048916 | Bacteria | 3774 |
| 147 | Ga0496114_0115899 | 3300048917 | Bacteria | 2299 |
| 148 | Ga0496117_0014669 | 3300048920 | Bacteria | 6735 |
| 149 | Ga0496118_0003987 | 3300048921 | Bacteria | 17997 |
| 150 | Ga0496121_0006608 | 3300048924 | Bacteria | 14308 |
| 151 | Ga0496122_0061006 | 3300048925 | Bacteria | 2772 |
| 152 | Ga0501033_0001637 | 3300049570 | Bacteria | 19670 |
| 153 | Ga0501033_0491741 | 3300049570 | Bacteria | 849 |
| 154 | Ga0501034_0796060 | 3300049571 | Bacteria | 838 |
| 155 | Ga0501043_0015389 | 3300049579 | Bacteria | 5991 |
| 156 | Ga0501043_0018574 | 3300049579 | Bacteria | 5455 |
| 157 | Ga0501080_0493814 | 3300049742 | Bacteria | 1094 |
| 158 | Ga0501241_048974 | 3300049758 | Bacteria | 832 |
| 159 | Ga0501035_0034202 | 3300049822 | Bacteria | 4619 |
| 160 | nmdc:mga00v17_752_c1 | 3300050491 | Bacteria | 17646 |
| 161 | Ga0587079_020058 | 3300059647 | Bacteria | 1189 |
| 162 | 2511180736 | 2510917027 | Bacteria | 5287437 |
| 163 | 2512636940 | 2512564013 | Bacteria | 6286191 |
| 164 | 2572253417 | 2571042365 | Bacteria | 3289345 |
| 165 | 2595447121 | 2593339238 | Bacteria | 4182970 |
| 166 | 2643819030 | 2643221559 | Bacteria | 4424915 |
| 167 | 2643879550 | 2643221573 | Bacteria | 4784121 |
| 168 | 2643941300 | 2643221586 | Bacteria | 4446529 |
| 169 | 2644080454 | 2643221612 | Bacteria | 4361984 |
| 170 | 2644528759 | 2643221695 | Bacteria | 3441323 |
| 171 | 2644662839 | 2643221720 | Bacteria | 4694283 |
| 172 | 2644697067 | 2643221727 | Bacteria | 4415595 |
| 173 | 2644698206 | 2643221728 | Bacteria | 4797149 |
| 174 | 2831907082 | 2831905167 | Bacteria | 3319172 |
| 175 | 2857461475 | 2857460504 | Bacteria | 5194327 |
| 176 | 2857466784 | 2857465823 | Bacteria | 6772595 |
| 177 | 2857592784 | 2857591370 | Bacteria | 6569758 |
| 178 | 2865005968 | 2865002811 | Bacteria | 6333767 |
| 179 | 2888581392 | 2888578766 | Bacteria | 6743310 |
| 180 | 2889049983 | 2889049205 | Bacteria | 7524325 |
| 181 | 2890738683 | 2890737413 | Bacteria | 4269751 |
| 182 | 2898715742 | 2898713307 | Bacteria | 4110805 |
| 183 | 2898907700 | 2898907183 | Bacteria | 4067722 |
| 184 | 2915602125 | 2915597211 | Bacteria | 6475886 |
| 185 | 2915610997 | 2915606848 | Bacteria | 6032732 |
| 186 | 2929187222 | 2929183550 | Bacteria | 6377511 |
| 187 | 2980184631 | 2980182181 | Bacteria | 9454109 |
| 188 | 2995950822 | 2995948881 | Bacteria | 6358104 |
| 189 | 8003014782 | 8003014200 | Bacteria | 4059994 |
| 190 | 8057474063 | 8057473075 | Bacteria | 5892720 |
| 191 | 8057978703 | 8057977335 | Bacteria | 5694872 |
| 192 | Ga0209025_1023474 | |||
| 193 | Ga0055532_1000736 | |||
| 194 | Ga0055526_1010879 | |||
| 195 | Ga0055524_1009650 | |||
| 196 | Ga0055524_1020236 | |||
| 197 | Ga0055536_1032411 | |||
| 198 | Ga0055530_10004028 | |||
| 199 | Ga0055531_10009526 | |||
| 200 | Ga0070676_10075888 | |||
| 201 | Ga0070670_100070163 | |||
| 202 | Ga0068869_100023045 | |||
| 203 | Ga0070675_100698593 | |||
| 204 | Ga0070671_100725612 | |||
| 205 | Ga0070673_100269201 | |||
| 206 | Ga0070673_100724188 | |||
| 207 | Ga0070667_100444284 | |||
| 208 | Ga0068867_100017937 | |||
| 209 | Ga0070679_100071213 | |||
| 210 | Ga0068853_100010301 | |||
| 211 | Ga0070665_100099423 | |||
| 212 | Ga0070665_100158792 | |||
| 213 | Ga0068855_100420116 | |||
| 214 | Ga0068857_100075987 | |||
| 215 | Ga0068856_100006866 | |||
| 216 | Ga0068859_100001560 | |||
| 217 | Ga0068864_100500910 | |||
| 218 | Ga0068861_100028427 | |||
| 219 | Ga0068851_10148193 | |||
| 220 | Ga0068858_100140409 | |||
| 221 | Ga0068862_100009462 | |||
| 222 | Ga0075364_10000021 | |||
| 223 | Ga0068865_100112551 | |||
| 224 | Ga0097620_100001560 | |||
| 225 | Ga0105245_10037590 | |||
| 226 | Ga0105239_10287218 | |||
| 227 | Ga0157327_1002029 | |||
| 228 | Ga0157375_11160520 | |||
| 229 | Ga0209674_100337 | |||
| 230 | Ga0209147_100053 | |||
| 231 | Ga0209437_100700 | |||
| 232 | Ga0209148_1001276 | |||
| 233 | Ga0209673_1003718 | |||
| 234 | Ga0209130_1006208 | |||
| 235 | Ga0209675_1008414 | |||
| 236 | Ga0209675_1024434 | |||
| 237 | Ga0209676_1001759 | |||
| 238 | Ga0209676_1034871 | |||
| 239 | Ga0209025_1005054 | |||
| 240 | Ga0209564_1014189 | |||
| 241 | Ga0209758_1014146 | |||
| 242 | Ga0209758_1038498 | |||
| 243 | Ga0209050_1000579 | |||
| 244 | Ga0209050_1015581 | |||
| 245 | Ga0209256_1002532 | |||
| 246 | Ga0209256_1006837 | |||
| 247 | Ga0209257_1000148 | |||
| 248 | Ga0209257_1001190 | |||
| 249 | Ga0209257_1016289 | |||
| 250 | Ga0209257_1022318 | |||
| 251 | Ga0207656_10114866 | |||
| 252 | Ga0207645_10040495 | |||
| 253 | Ga0207707_10099179 | |||
| 254 | Ga0207649_10182844 | |||
| 255 | Ga0207652_10108509 | |||
| 256 | Ga0207650_10082058 | |||
| 257 | Ga0207687_10138717 | |||
| 258 | Ga0207704_10146762 | |||
| 259 | Ga0207691_10077311 | |||
| 260 | Ga0207689_10026719 | |||
| 261 | Ga0207667_10464292 | |||
| 262 | Ga0207651_10081575 | |||
| 263 | Ga0207668_10017625 | |||
| 264 | Ga0207658_10028463 | |||
| 265 | Ga0207703_10089870 | |||
| 266 | Ga0207639_10180708 | |||
| 267 | Ga0207702_10001298 | |||
| 268 | Ga0207641_10103212 | |||
| 269 | Ga0207648_10024934 | |||
| 270 | Ga0207674_10088324 | |||
| 271 | Ga0207675_100022934 | |||
| 272 | Ga0207675_100187428 | |||
| 273 | Ga0207698_10392900 | |||
| 274 | Ga0268266_10159106 | |||
| 275 | Ga0268265_10000196 | |||
| 276 | Ga0268265_10217466 | |||
| 277 | Ga0268264_10015787 | |||
| 278 | Ga0316575_10005490 | |||
| 279 | Ga0316576_10008580 | |||
| 280 | Ga0316576_10019931 | |||
| 281 | Ga0316576_10178881 | |||
| 282 | Ga0307405_10152229 | |||
| 283 | Ga0307413_10041805 | |||
| 284 | Ga0307413_10491713 | |||
| 285 | Ga0307410_10084534 | |||
| 286 | Ga0307406_10037387 | |||
| 287 | Ga0307406_10226067 | |||
| 288 | Ga0307407_10123612 | |||
| 289 | Ga0307412_10429697 | |||
| 290 | Ga0307412_10475739 | |||
| 291 | Ga0307409_100310408 | |||
| 292 | Ga0307414_10009976 | |||
| 293 | Ga0307414_10029824 | |||
| 294 | Ga0307414_10216749 | |||
| 295 | Ga0307414_10226807 | |||
| 296 | Ga0307411_10427015 | |||
| 297 | Ga0307411_10537982 | |||
| 298 | Ga0316583_10002884 | |||
| 299 | Ga0316580_10006077 | |||
| 300 | Ga0316574_0013331 | |||
| 301 | Ga0316582_0360426 | |||
| 302 | Ga0316584_0124420 | |||
| 303 | Ga0395905_0552137 | |||
| 304 | Ga0439436_0003751 | |||
| 305 | Ga0439436_0010728 | |||
| 306 | Ga0439436_0045308 | |||
| 307 | Ga0439439_0001166 | |||
| 308 | Ga0439439_0047466 | |||
| 309 | Ga0439465_0017109 | |||
| 310 | Ga0451800_0869769 | |||
| 311 | Ga0439449_0000070 | |||
| 312 | Ga0439449_0005125 | |||
| 313 | Ga0439449_0145929 | |||
| 314 | Ga0439462_0000390 | |||
| 315 | Ga0450908_000156 | |||
| 316 | Ga0466959_0067879 | |||
| 317 | Ga0495638_0066615 | |||
| 318 | Ga0495663_0021104 | |||
| 319 | Ga0495663_0038310 | |||
| 320 | Ga0495621_0000034 | |||
| 321 | Ga0495621_0015621 | |||
| 322 | Ga0495656_0000437 | |||
| 323 | Ga0495656_0018294 | |||
| 324 | Ga0495668_0031993 | |||
| 325 | Ga0495649_0267619 | |||
| 326 | Ga0495636_0000787 | |||
| 327 | Ga0495636_0002356 | |||
| 328 | Ga0495636_0014676 | |||
| 329 | Ga0495636_0041246 | |||
| 330 | Ga0495685_121027 | |||
| 331 | Ga0496100_0072250 | |||
| 332 | Ga0496103_0075211 | |||
| 333 | Ga0496106_0119910 | |||
| 334 | Ga0496107_0183362 | |||
| 335 | Ga0496108_0114841 | |||
| 336 | Ga0496111_0002420 | |||
| 337 | Ga0496113_0032831 | |||
| 338 | Ga0496114_0115899 | |||
| 339 | Ga0496117_0014669 | |||
| 340 | Ga0496118_0003987 | |||
| 341 | Ga0496121_0006608 | |||
| 342 | Ga0496122_0061006 | |||
| 343 | Ga0501033_0001637 | |||
| 344 | Ga0501033_0491741 | |||
| 345 | Ga0501034_0796060 | |||
| 346 | Ga0501043_0015389 | |||
| 347 | Ga0501043_0018574 | |||
| 348 | Ga0501080_0493814 | |||
| 349 | Ga0501241_048974 | |||
| 350 | Ga0501035_0034202 | |||
| 351 | nmdc:mga00v17_752_c1 | |||
| 352 | Ga0587079_020058 | |||
| 353 | 2511180736 | |||
| 354 | 2512636940 | |||
| 355 | 2572253417 | |||
| 356 | 2595447121 | |||
| 357 | 2643819030 | |||
| 358 | 2643879550 | |||
| 359 | 2643941300 | |||
| 360 | 2644080454 | |||
| 361 | 2644528759 | |||
| 362 | 2644662839 | |||
| 363 | 2644697067 | |||
| 364 | 2644698206 | |||
| 365 | 2831907082 | |||
| 366 | 2857461475 | |||
| 367 | 2857466784 | |||
| 368 | 2857592784 | |||
| 369 | 2865005968 | |||
| 370 | 2888581392 | |||
| 371 | 2889049983 | |||
| 372 | 2890738683 | |||
| 373 | 2898715742 | |||
| 374 | 2898907700 | |||
| 375 | 2915602125 | |||
| 376 | 2915610997 | |||
| 377 | 2929187222 | |||
| 378 | 2980184631 | |||
| 379 | 2995950822 | |||
| 380 | 8003014782 | |||
| 381 | 8057474063 | |||
| 382 | 8057978703 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1x07-assembly1.cif.gz_A | crystal structure of undecaprenyl pyrophosphate synthase in complex with mg and ipp | 0.9526 | 40 | 262 |
| 5hc8-assembly1.cif.gz_A | crystal structure of lavandulyl diphosphate synthase from lavandula x intermedia in complex with dimethylallyl diphosphate | 0.9491 | 39 | 263 |
| 4onc-assembly1.cif.gz_B | crystal structure of mycobacterium tuberculosis decaprenyl diphosphate synthase in complex with bph-640 | 0.9453 | 39 | 268 |
| 6szg-assembly1.cif.gz_A | acinetobacter baumannii undecaprenyl pyrophosphate synthase (ab-upps) in complex with gr839 and gsk513 | 0.9453 | 38 | 258 |
| 4u82-assembly1.cif.gz_A | structure of s. aureus undecaprenyl diphosphate synthase in complex with fspp and sulfate | 0.9443 | 34 | 268 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5hc7A00 | Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like | 0.9518 | 39 | 261 | 3.40.1180.10 |
| 2vg2A01 | Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like | 0.9464 | 39 | 261 | 3.40.1180.10 |
| af_A0A1D8PFD1_28_274_3.40.1180.10 | Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like | 0.944 | 35 | 259 | 3.40.1180.10 |
| 2dtnB00 | Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like | 0.9343 | 42 | 258 | 3.40.1180.10 |
| 1f75B00 | Alpha Beta;3-Layer(aba) Sandwich;Undecaprenyl pyrophosphate synthetase;Decaprenyl diphosphate synthase-like | 0.9299 | 38 | 261 | 3.40.1180.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A202DGC7-F1-model_v4 | Di-trans,poly-cis-decaprenylcistransferase | 0.9789 | 38 | 168 |
GO:0016094
GO:0045547 |
| AF-A0A1B2ZBN4-F1-model_v4 | UDP pyrophosphate synthase | 0.9788 | 38 | 155 |
GO:0016094
GO:0045547 |
| AF-A0A7X8HS82-F1-model_v4 | Isoprenyl transferase (EC 2.5.1.-) | 0.9679 | 35 | 264 |
GO:0000287
GO:0016094 GO:0045547 |
| AF-A0A3M1DZX6-F1-model_v4 | Di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31) | 0.9638 | 38 | 239 |
GO:0008834
GO:0016094 GO:0045547 GO:0046872 |
| AF-A0A2W5YVN9-F1-model_v4 | Isoprenyl transferase (EC 2.5.1.-) | 0.9638 | 42 | 258 |
GO:0000287
GO:0005829 GO:0008834 GO:0016094 GO:0045547 |