F294264

General Info

Members Datasets Scaffolds Average Seq Length
191 145 382 266

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10055237|Ga0316576_100552373
Length 304
Sequence MHHSRHSSGPDDGVGVALLRRRRLAQRRCTVRYARLVTEGRLGGLVALVVGAGQTPGETIGNGRAIATTFAREGADVFCVDRIAERADETAASIRGDGGRATAVTADITHDEQCAGTVARILADRGRIDVLVNVVGIGGRGDGPAHSADPEAFERIVDVNLTAMWRMCRAALPTMRERRRGSIVNVSSAASFAGGFQVAYEVSKAGVNRLTTSIAQSNASRGVRCNAIALGLVDTPMAVGGIAAARNVPIEQVRDERNRQVPLLGGMGTAWDAANAALFLASDEARFVTGVVLPVDGGTSIRIG

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
74 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
78 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
79 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
80 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
81 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
87 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
88 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
91 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
92 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
101 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
102 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
103 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
104 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
108 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
138 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
139 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 2547132424 Nocardia nova SH22a Isolate Unclassified
142 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
143 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
144 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
145 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.86
Metatranscriptomes 0.52
Isolates 2.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.05
Nodule 0
Rhizoplane 5.76
Rhizosphere 84.82
Stem 0
Stem Tuber 0
Unclassified 2.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10055237 3300031727 Bacteria 2897
2 JGI25406J46586_10028996 3300003203 Bacteria 2101
3 Ga0058860_10122065 3300004801 Bacteria 1733
4 Ga0070658_10155071 3300005327 Bacteria 1919
5 Ga0070680_100003673 3300005336 Bacteria 11460
6 Ga0070680_100431553 3300005336 Bacteria 1124
7 Ga0070660_100113358 3300005339 Bacteria 2159
8 Ga0070691_10004177 3300005341 Bacteria 6559
9 Ga0070675_100143345 3300005354 Bacteria 2044
10 Ga0070671_100039587 3300005355 Bacteria 3913
11 Ga0070659_100000553 3300005366 Bacteria 27361
12 Ga0070659_100021520 3300005366 Bacteria 4912
13 Ga0070700_100173530 3300005441 Bacteria 1495
14 Ga0070681_10001467 3300005458 Bacteria 20801
15 Ga0070681_10453694 3300005458 Bacteria 1194
16 Ga0070685_10385183 3300005466 Unclassified 967
17 Ga0070707_100470661 3300005468 Bacteria 1218
18 Ga0070698_100029459 3300005471 Bacteria 5699
19 Ga0070679_100073035 3300005530 Bacteria 3423
20 Ga0068853_100020174 3300005539 Bacteria 5540
21 Ga0068853_100619457 3300005539 Bacteria 1029
22 Ga0070665_100000433 3300005548 Bacteria 60988
23 Ga0070665_100067252 3300005548 Bacteria 3593
24 Ga0068855_100210072 3300005563 Bacteria 2188
25 Ga0068855_100278467 3300005563 Bacteria 1858
26 Ga0068855_100293407 3300005563 Bacteria 1802
27 Ga0068855_100335420 3300005563 Bacteria 1668
28 Ga0068852_100261816 3300005616 Bacteria 1661
29 Ga0068852_100752418 3300005616 Bacteria 987
30 Ga0068859_100430409 3300005617 Bacteria 1416
31 Ga0068864_100003190 3300005618 Bacteria 13563
32 Ga0068864_100404603 3300005618 Bacteria 1298
33 Ga0068858_100119338 3300005842 Bacteria 2466
34 Ga0068860_100360617 3300005843 Bacteria 1432
35 Ga0068860_100990375 3300005843 Bacteria 858
36 Ga0068862_100568537 3300005844 Bacteria 1085
37 Ga0081539_10000928 3300005985 Bacteria 55111
38 Ga0075428_100322379 3300006844 Bacteria 1660
39 Ga0075431_100026140 3300006847 Bacteria 5988
40 Ga0068865_100003733 3300006881 Bacteria 9146
41 Ga0097620_100430381 3300006931 Bacteria 1416
42 Ga0105240_10002462 3300009093 Bacteria 29759
43 Ga0105240_10083384 3300009093 Bacteria 3923
44 Ga0105240_10125415 3300009093 Bacteria 3086
45 Ga0111539_10325677 3300009094 Bacteria 1788
46 Ga0105245_10452546 3300009098 Bacteria 1293
47 Ga0114129_10193773 3300009147 Bacteria 2757
48 Ga0114129_10968339 3300009147 Unclassified 1074
49 Ga0105243_10096803 3300009148 Bacteria 2442
50 Ga0105248_10000106 3300009177 Bacteria 93898
51 Ga0105248_10187542 3300009177 Bacteria 2331
52 Ga0105238_10057419 3300009551 Bacteria 3902
53 Ga0105249_10061949 3300009553 Bacteria 3434
54 Ga0105239_10771045 3300010375 Bacteria 1101
55 Ga0157370_10162137 3300013104 Bacteria 2080
56 Ga0157369_10289467 3300013105 Bacteria 1705
57 Ga0157378_10054366 3300013297 Bacteria 3565
58 Ga0163162_10202699 3300013306 Bacteria 2113
59 Ga0163162_10223435 3300013306 Unclassified 2013
60 Ga0157375_10066785 3300013308 Bacteria 3592
61 Ga0163163_10008143 3300014325 Bacteria 9295
62 Ga0163163_10065550 3300014325 Bacteria 3606
63 Ga0163163_10265099 3300014325 Bacteria 1769
64 Ga0157379_10309544 3300014968 Bacteria 1441
65 Ga0163161_10065451 3300017792 Bacteria 2652
66 Ga0163161_10432861 3300017792 Bacteria 1060
67 Ga0213872_10008504 3300021361 Bacteria 4966
68 Ga0213876_10155994 3300021384 Bacteria 1214
69 Ga0209026_1001873 3300025250 Bacteria 8574
70 Ga0207705_10047802 3300025909 Bacteria 3077
71 Ga0207705_10216043 3300025909 Bacteria 1455
72 Ga0207707_10072874 3300025912 Bacteria 2994
73 Ga0207707_10635872 3300025912 Bacteria 900
74 Ga0207695_10001222 3300025913 Bacteria 44042
75 Ga0207695_10041989 3300025913 Bacteria 4890
76 Ga0207695_10072427 3300025913 Bacteria 3516
77 Ga0207695_10123614 3300025913 Bacteria 2553
78 Ga0207671_10239362 3300025914 Bacteria 1425
79 Ga0207660_10035349 3300025917 Bacteria 3469
80 Ga0207657_10000314 3300025919 Bacteria 51222
81 Ga0207657_10013900 3300025919 Bacteria 7877
82 Ga0207652_10102176 3300025921 Bacteria 2533
83 Ga0207652_10131523 3300025921 Bacteria 2232
84 Ga0207646_10056359 3300025922 Bacteria 3513
85 Ga0207694_10064241 3300025924 Bacteria 2861
86 Ga0207694_10172813 3300025924 Bacteria 1750
87 Ga0207694_10263923 3300025924 Bacteria 1411
88 Ga0207644_10015356 3300025931 Bacteria 5138
89 Ga0207690_10000159 3300025932 Bacteria 52852
90 Ga0207691_10430701 3300025940 Bacteria 1123
91 Ga0207711_10000098 3300025941 Bacteria 92296
92 Ga0207667_10010250 3300025949 Bacteria 10971
93 Ga0207651_10104855 3300025960 Bacteria 2107
94 Ga0207651_10481598 3300025960 Bacteria 1070
95 Ga0207703_10115682 3300026035 Bacteria 2295
96 Ga0207639_10124215 3300026041 Bacteria 2126
97 Ga0207641_10699257 3300026088 Bacteria 998
98 Ga0207676_10007091 3300026095 Bacteria 7944
99 Ga0207675_100083467 3300026118 Bacteria 2996
100 Ga0268266_10000003 3300028379 Bacteria 1701703
101 Ga0268266_10012482 3300028379 Bacteria 7342
102 Ga0268265_10085390 3300028380 Bacteria 2505
103 Ga0265337_1021009 3300028556 Bacteria 2040
104 Ga0307517_10015754 3300028786 Bacteria 10013
105 Ga0307517_10093677 3300028786 Bacteria 2433
106 Ga0265338_10004370 3300028800 Bacteria 19128
107 Ga0265327_10000943 3300031251 Bacteria 42413
108 Ga0307513_10000790 3300031456 Bacteria 45976
109 Ga0307408_100103244 3300031548 Bacteria 2176
110 Ga0307508_10075788 3300031616 Bacteria 2941
111 Ga0316576_10028717 3300031727 Bacteria 3924
112 Ga0316576_10047206 3300031727 Bacteria 3120
113 Ga0316578_10006602 3300031728 Bacteria 5744
114 Ga0316578_10048086 3300031728 Bacteria 2490
115 Ga0307413_10233898 3300031824 Bacteria 1351
116 Ga0307410_10024636 3300031852 Bacteria 3763
117 Ga0307407_10068363 3300031903 Bacteria 2104
118 Ga0307409_100067915 3300031995 Bacteria 2817
119 Ga0307411_10005041 3300032005 Bacteria 6428
120 Ga0307411_10566801 3300032005 Bacteria 971
121 Ga0316585_10017376 3300032137 Bacteria 2175
122 Ga0373936_0010291 3300035113 Bacteria 3530
123 Ga0316574_0003722 3300035398 Bacteria 7899
124 Ga0316574_0010388 3300035398 Bacteria 5260
125 Ga0373935_0027778 3300035692 Bacteria 3497
126 Ga0373947_0096875 3300035725 Bacteria 1848
127 Ga0316582_0005541 3300036647 Bacteria 6515
128 Ga0316584_0069349 3300036712 Bacteria 2643
129 Ga0316584_0091187 3300036712 Bacteria 2281
130 Ga0395899_0000680 3300037312 Bacteria 34408
131 Ga0395900_0000111 3300037418 Bacteria 145390
132 Ga0395900_0029744 3300037418 Bacteria 5605
133 Ga0395905_0077732 3300037471 Bacteria 3109
134 Ga0395905_0360987 3300037471 Bacteria 1345
135 Ga0436364_0825514 3300037853 Bacteria 6014
136 Ga0436364_0999209 3300037853 Bacteria 1577
137 Ga0395901_0000032 3300038443 Bacteria 235172
138 Ga0436365_1820095 3300039437 Bacteria 4148
139 Ga0436361_0874339 3300039447 Bacteria 12174
140 Ga0436363_1171537 3300039450 Bacteria 1562
141 Ga0439434_0114423 3300042435 Bacteria 876
142 Ga0495651_0352514 3300046462 Bacteria 972
143 Ga0495583_0009365 3300046506 Bacteria 5862
144 Ga0495616_0000216 3300046513 Bacteria 48001
145 Ga0495628_0267541 3300046516 Bacteria 1272
146 Ga0495668_0038122 3300046616 Bacteria 2687
147 Ga0495668_0042879 3300046616 Bacteria 2518
148 Ga0495611_0016193 3300046648 Bacteria 3187
149 Ga0495625_0001110 3300046660 Bacteria 34896
150 Ga0495672_0003258 3300047320 Bacteria 14067
151 Ga0495680_0429595 3300047322 Bacteria 907
152 Ga0496104_0163560 3300048907 Bacteria 2134
153 Ga0496106_0101802 3300048909 Bacteria 2228
154 Ga0496107_0176992 3300048910 Bacteria 1584
155 Ga0496109_0006327 3300048912 Bacteria 9973
156 Ga0496110_0295279 3300048913 Bacteria 1476
157 Ga0496111_0135939 3300048914 Bacteria 1821
158 Ga0496112_0043234 3300048915 Bacteria 4411
159 Ga0496112_0234864 3300048915 Bacteria 1787
160 Ga0496113_0096465 3300048916 Bacteria 2286
161 Ga0496115_0000465 3300048918 Bacteria 32318
162 Ga0496115_0164902 3300048918 Bacteria 1832
163 Ga0501038_0420724 3300049574 Bacteria 1031
164 Ga0501040_0281519 3300049576 Bacteria 1188
165 Ga0501047_0000771 3300049581 Bacteria 33529
166 Ga0501047_0080285 3300049581 Bacteria 3135
167 Ga0501048_0422910 3300049582 Bacteria 953
168 Ga0501069_0001540 3300049585 Bacteria 11391
169 Ga0501070_0000059 3300049586 Bacteria 94646
170 Ga0501071_0268493 3300049587 Bacteria 1289
171 Ga0501072_0194943 3300049588 Bacteria 1615
172 Ga0501073_0102142 3300049589 Bacteria 1991
173 Ga0501074_0030729 3300049590 Bacteria 3892
174 Ga0501074_0190040 3300049590 Bacteria 1464
175 Ga0501076_0702561 3300049592 Bacteria 835
176 Ga0501080_0000061 3300049742 Bacteria 70965
177 Ga0501080_0352172 3300049742 Bacteria 1329
178 Ga0501083_0001676 3300049744 Bacteria 15125
179 Ga0501044_0002607 3300049823 Bacteria 20483
180 nmdc:mga09592_518343_c1 3300050508 Unclassified 1025
181 nmdc:mga0qj67_188876_c1 3300050509 Bacteria 1674
182 nmdc:mga06r32_10314_c1 3300050510 Bacteria 8425
183 Ga0495595_0065379 3300053084 Bacteria 1711
184 Ga0500604_0003506 3300053151 Bacteria 4223
185 Ga0500627_0000874 3300053158 Bacteria 8069
186 Ga0501084_0061221 3300054114 Bacteria 3151
187 2548696067 2547132424 Bacteria 8348532
188 2643998644 2643221598 Bacteria 4578346
189 2644087412 2643221614 Bacteria 4260023
190 2644344544 2643221661 Bacteria 4267604
191 2644366772 2643221666 Bacteria 4265935
192 Ga0316576_10055237
193 JGI25406J46586_10028996
194 Ga0058860_10122065
195 Ga0070658_10155071
196 Ga0070680_100003673
197 Ga0070680_100431553
198 Ga0070660_100113358
199 Ga0070691_10004177
200 Ga0070675_100143345
201 Ga0070671_100039587
202 Ga0070659_100000553
203 Ga0070659_100021520
204 Ga0070700_100173530
205 Ga0070681_10001467
206 Ga0070681_10453694
207 Ga0070685_10385183
208 Ga0070707_100470661
209 Ga0070698_100029459
210 Ga0070679_100073035
211 Ga0068853_100020174
212 Ga0068853_100619457
213 Ga0070665_100000433
214 Ga0070665_100067252
215 Ga0068855_100210072
216 Ga0068855_100278467
217 Ga0068855_100293407
218 Ga0068855_100335420
219 Ga0068852_100261816
220 Ga0068852_100752418
221 Ga0068859_100430409
222 Ga0068864_100003190
223 Ga0068864_100404603
224 Ga0068858_100119338
225 Ga0068860_100360617
226 Ga0068860_100990375
227 Ga0068862_100568537
228 Ga0081539_10000928
229 Ga0075428_100322379
230 Ga0075431_100026140
231 Ga0068865_100003733
232 Ga0097620_100430381
233 Ga0105240_10002462
234 Ga0105240_10083384
235 Ga0105240_10125415
236 Ga0111539_10325677
237 Ga0105245_10452546
238 Ga0114129_10193773
239 Ga0114129_10968339
240 Ga0105243_10096803
241 Ga0105248_10000106
242 Ga0105248_10187542
243 Ga0105238_10057419
244 Ga0105249_10061949
245 Ga0105239_10771045
246 Ga0157370_10162137
247 Ga0157369_10289467
248 Ga0157378_10054366
249 Ga0163162_10202699
250 Ga0163162_10223435
251 Ga0157375_10066785
252 Ga0163163_10008143
253 Ga0163163_10065550
254 Ga0163163_10265099
255 Ga0157379_10309544
256 Ga0163161_10065451
257 Ga0163161_10432861
258 Ga0213872_10008504
259 Ga0213876_10155994
260 Ga0209026_1001873
261 Ga0207705_10047802
262 Ga0207705_10216043
263 Ga0207707_10072874
264 Ga0207707_10635872
265 Ga0207695_10001222
266 Ga0207695_10041989
267 Ga0207695_10072427
268 Ga0207695_10123614
269 Ga0207671_10239362
270 Ga0207660_10035349
271 Ga0207657_10000314
272 Ga0207657_10013900
273 Ga0207652_10102176
274 Ga0207652_10131523
275 Ga0207646_10056359
276 Ga0207694_10064241
277 Ga0207694_10172813
278 Ga0207694_10263923
279 Ga0207644_10015356
280 Ga0207690_10000159
281 Ga0207691_10430701
282 Ga0207711_10000098
283 Ga0207667_10010250
284 Ga0207651_10104855
285 Ga0207651_10481598
286 Ga0207703_10115682
287 Ga0207639_10124215
288 Ga0207641_10699257
289 Ga0207676_10007091
290 Ga0207675_100083467
291 Ga0268266_10000003
292 Ga0268266_10012482
293 Ga0268265_10085390
294 Ga0265337_1021009
295 Ga0307517_10015754
296 Ga0307517_10093677
297 Ga0265338_10004370
298 Ga0265327_10000943
299 Ga0307513_10000790
300 Ga0307408_100103244
301 Ga0307508_10075788
302 Ga0316576_10028717
303 Ga0316576_10047206
304 Ga0316578_10006602
305 Ga0316578_10048086
306 Ga0307413_10233898
307 Ga0307410_10024636
308 Ga0307407_10068363
309 Ga0307409_100067915
310 Ga0307411_10005041
311 Ga0307411_10566801
312 Ga0316585_10017376
313 Ga0373936_0010291
314 Ga0316574_0003722
315 Ga0316574_0010388
316 Ga0373935_0027778
317 Ga0373947_0096875
318 Ga0316582_0005541
319 Ga0316584_0069349
320 Ga0316584_0091187
321 Ga0395899_0000680
322 Ga0395900_0000111
323 Ga0395900_0029744
324 Ga0395905_0077732
325 Ga0395905_0360987
326 Ga0436364_0825514
327 Ga0436364_0999209
328 Ga0395901_0000032
329 Ga0436365_1820095
330 Ga0436361_0874339
331 Ga0436363_1171537
332 Ga0439434_0114423
333 Ga0495651_0352514
334 Ga0495583_0009365
335 Ga0495616_0000216
336 Ga0495628_0267541
337 Ga0495668_0038122
338 Ga0495668_0042879
339 Ga0495611_0016193
340 Ga0495625_0001110
341 Ga0495672_0003258
342 Ga0495680_0429595
343 Ga0496104_0163560
344 Ga0496106_0101802
345 Ga0496107_0176992
346 Ga0496109_0006327
347 Ga0496110_0295279
348 Ga0496111_0135939
349 Ga0496112_0043234
350 Ga0496112_0234864
351 Ga0496113_0096465
352 Ga0496115_0000465
353 Ga0496115_0164902
354 Ga0501038_0420724
355 Ga0501040_0281519
356 Ga0501047_0000771
357 Ga0501047_0080285
358 Ga0501048_0422910
359 Ga0501069_0001540
360 Ga0501070_0000059
361 Ga0501071_0268493
362 Ga0501072_0194943
363 Ga0501073_0102142
364 Ga0501074_0030729
365 Ga0501074_0190040
366 Ga0501076_0702561
367 Ga0501080_0000061
368 Ga0501080_0352172
369 Ga0501083_0001676
370 Ga0501044_0002607
371 nmdc:mga09592_518343_c1
372 nmdc:mga0qj67_188876_c1
373 nmdc:mga06r32_10314_c1
374 Ga0495595_0065379
375 Ga0500604_0003506
376 Ga0500627_0000874
377 Ga0501084_0061221
378 2548696067
379 2643998644
380 2644087412
381 2644344544
382 2644366772

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

45

243

0.94

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

58

300

0.92

PF08659

KR

KR domain

56

235

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7djs-assembly1.cif.gz_C crystal structure of isopiperitenol dehydrogenase from pseudomonas aeruginosa complexed with nad 0.9695 8 263
6ixm-assembly1.cif.gz_B crystal structure of the ketone reductase chkred20 from the genome of chryseobacterium sp. ca49 complexed with nad 0.9672 4 263
4ijk-assembly1.cif.gz_D crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from helicobacter pylori 26695 0.9649 8 260
4ijk-assembly1.cif.gz_B crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from helicobacter pylori 26695 0.961 8 260
1uls-assembly1.cif.gz_C crystal structure of tt0140 from thermus thermophilus hb8 0.9592 4 266
ID Description Score Start End Superfamily
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9672 4 263 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9581 2 94 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9553 4 263 3.40.50.720
4urfA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9526 5 264 3.40.50.720
4ni5A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.949 4 264 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V6S1M5-F1-model_v4 Luciferase-like domain-containing protein 0.9783 5 197 GO:0006633
GO:0016616
GO:0016705
GO:0048038
AF-A0A6B0Y2K8-F1-model_v4 SDR family oxidoreductase 0.9694 6 264 GO:0016491
AF-A0A6B1A4M9-F1-model_v4 SDR family oxidoreductase 0.9691 1 264 GO:0016491
AF-A0A4Q4CLH7-F1-model_v4 SDR family oxidoreductase 0.9632 69 264 GO:0016491
AF-A0A6N8Y9W7-F1-model_v4 Glucose 1-dehydrogenase (EC 1.1.1.47) 0.9622 3 264 GO:0006633
GO:0047936
GO:0048038

Map