F294348

General Info

Members Datasets Scaffolds Average Seq Length
191 149 382 498

Family's Representative Sequence

Representative Sequence 3300037068|Ga0373925_0129858|Ga0373925_0129858_13_1659
Length 548
Sequence MSAVIKEAQASSPVAHFIATPKKLLIDGKWVAAASGKTFEVKNPATGSTIARAAEGDKADIDLAVRAARRAFESAPWATMTPSERSKVTWRVGDLITKYADELAELEALDNGKPMAVARVADVALAADILQYMAGWCTKIEGKTIPISVIYTPGAKYHSYTSPEPIGVVGQIIPWNFPLLMAAWKLAPALATGCTVVLKVAEETPLSALRLGEILLEAGIPPGVVNIVTGFGETAGAALAAHPGVDKVAFTGSTEVGRLIVQAAARDLKHVSLELGGKSPNIILEDADLDVAIPGAANAIFFNHGQCCCAGSRLYVHERHFDRVVAGVSEHAKSIKLGSGLDPTSQMGPMVSEIQRDRVSSYLEAGKKEGAKATAGGKAREGAGYFVEPTVFVDTKPGMKIVKEEIFGPVVTVAPFTDAEETLVQEANDTIYGLAAGIWTRDVSKAHALAARLKAGTVWINCYNIFDAALPFGGYKQSGWGREMGEAVLDSYLATKAVTIGLRHSAPEAGSRDPAWAGSLISQVHRAPPRNAQGRAFIWPEVQRKVKE

Samples

Sample ID Description Type Environment
1 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
2 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
67 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
88 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
92 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
93 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
94 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
97 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
98 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
99 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
110 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
111 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
116 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
117 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
118 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
129 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
130 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
131 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
132 2599185190 Pseudomonas sp. NFPP04 Isolate Rhizoplane
133 2599185290 Pseudomonas sp. NFPP11 Isolate Rhizoplane
134 2643221576 Nocardioides sp. Root614 Isolate Unclassified
135 2643221590 Nocardioides sp. Root682 Isolate Unclassified
136 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
137 2721755523 Delftia sp. HK171 Isolate Unclassified
138 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
139 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
140 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
141 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
142 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
143 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
144 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
145 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
146 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
147 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
148 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
149 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.53
Metatranscriptomes 0
Isolates 10.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.71
Nodule 1.05
Rhizoplane 6.81
Rhizosphere 68.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373925_0129858 3300037068 Bacteria 1964
2 Ga0055532_1000024 3300003758 Bacteria 244166
3 Ga0055536_1015780 3300003781 Bacteria 2563
4 Ga0068868_100178467 3300005338 Bacteria 1761
5 Ga0070673_100102874 3300005364 Bacteria 2356
6 Ga0070667_100109929 3300005367 Bacteria 2389
7 Ga0070709_10051384 3300005434 Bacteria 2587
8 Ga0070713_100018083 3300005436 Bacteria 5353
9 Ga0070713_100028139 3300005436 Bacteria 4435
10 Ga0070713_100047795 3300005436 Bacteria 3519
11 Ga0070711_100094110 3300005439 Bacteria 2165
12 Ga0070708_100010514 3300005445 Bacteria 7502
13 Ga0070708_100012399 3300005445 Bacteria 6957
14 Ga0070708_100031697 3300005445 Bacteria 4577
15 Ga0070678_100038850 3300005456 Bacteria 3354
16 Ga0070706_100024072 3300005467 Bacteria 5607
17 Ga0070706_100034402 3300005467 Bacteria 4681
18 Ga0070707_100019932 3300005468 Bacteria 6322
19 Ga0070707_100034872 3300005468 Bacteria 4798
20 Ga0070698_100037470 3300005471 Bacteria 4999
21 Ga0070699_100007927 3300005518 Bacteria 9224
22 Ga0070697_100013319 3300005536 Bacteria 6450
23 Ga0070695_100015005 3300005545 Bacteria 4674
24 Ga0070665_100003894 3300005548 Bacteria 15772
25 Ga0070665_100033979 3300005548 Bacteria 5129
26 Ga0070665_100064240 3300005548 Bacteria 3680
27 Ga0068855_100001305 3300005563 Bacteria 30883
28 Ga0068855_100002844 3300005563 Bacteria 21273
29 Ga0068855_100005007 3300005563 Bacteria 16169
30 Ga0068859_100045697 3300005617 Bacteria 4399
31 Ga0068863_100034198 3300005841 Bacteria 4842
32 Ga0068863_100074372 3300005841 Bacteria 3214
33 Ga0070717_10000530 3300006028 Bacteria 24179
34 Ga0070717_10022533 3300006028 Bacteria 4978
35 Ga0070717_10057261 3300006028 Bacteria 3222
36 Ga0070716_100090214 3300006173 Bacteria 1853
37 Ga0075370_10023330 3300006353 Bacteria 3406
38 Ga0075436_100064843 3300006914 Bacteria 2525
39 Ga0097620_100045699 3300006931 Bacteria 4399
40 Ga0079104_1000011 3300006946 Bacteria 359962
41 Ga0075435_100071981 3300007076 Bacteria 2824
42 Ga0105240_10000791 3300009093 Bacteria 57291
43 Ga0105240_10000962 3300009093 Bacteria 51334
44 Ga0105243_10000624 3300009148 Bacteria 35279
45 Ga0105241_10010889 3300009174 Bacteria 6672
46 Ga0105242_10006473 3300009176 Bacteria 9021
47 Ga0105237_10006489 3300009545 Bacteria 12969
48 Ga0105237_10015576 3300009545 Bacteria 7907
49 Ga0105238_10146865 3300009551 Bacteria 2334
50 Ga0157378_10147025 3300013297 Bacteria 2193
51 Ga0157372_10319993 3300013307 Bacteria 1806
52 Ga0157375_10171873 3300013308 Bacteria 2315
53 Ga0182008_10005736 3300014497 Bacteria 7029
54 Ga0182007_10000520 3300015262 Bacteria 22665
55 Ga0163161_10000665 3300017792 Bacteria 27470
56 Ga0213876_10096894 3300021384 Bacteria 1563
57 Ga0213875_10051819 3300021388 Bacteria 1922
58 Ga0209147_100020 3300025229 Bacteria 474055
59 Ga0209676_1008173 3300025292 Bacteria 4725
60 Ga0209025_1001160 3300025294 Bacteria 37296
61 Ga0207642_10029500 3300025899 Bacteria 2273
62 Ga0207684_10004670 3300025910 Bacteria 12861
63 Ga0207684_10053629 3300025910 Bacteria 3422
64 Ga0207695_10004353 3300025913 Bacteria 19394
65 Ga0207695_10237726 3300025913 Bacteria 1724
66 Ga0207671_10034503 3300025914 Bacteria 3758
67 Ga0207693_10006287 3300025915 Bacteria 9853
68 Ga0207663_10070150 3300025916 Bacteria 2257
69 Ga0207646_10004480 3300025922 Bacteria 15144
70 Ga0207646_10061668 3300025922 Bacteria 3347
71 Ga0207700_10027784 3300025928 Bacteria 3968
72 Ga0207686_10034352 3300025934 Bacteria 3035
73 Ga0207709_10000074 3300025935 Bacteria 174947
74 Ga0207709_10000373 3300025935 Bacteria 45160
75 Ga0207665_10095351 3300025939 Bacteria 2067
76 Ga0207667_10002958 3300025949 Bacteria 21088
77 Ga0207667_10013161 3300025949 Bacteria 9484
78 Ga0207658_10127166 3300025986 Bacteria 2041
79 Ga0207677_10174121 3300026023 Bacteria 1686
80 Ga0207641_10039259 3300026088 Bacteria 3959
81 Ga0207648_10120565 3300026089 Bacteria 2306
82 Ga0209281_1000005 3300027111 Bacteria 1242284
83 Ga0268266_10007998 3300028379 Bacteria 9453
84 Ga0268266_10014539 3300028379 Bacteria 6765
85 Ga0268266_10034735 3300028379 Bacteria 4288
86 Ga0265336_10002068 3300028666 Bacteria 8542
87 Ga0265338_10005433 3300028800 Bacteria 16633
88 Ga0265338_10062666 3300028800 Bacteria 3248
89 Ga0307511_10016985 3300030521 Bacteria 6995
90 Ga0265328_10038666 3300031239 Bacteria 1760
91 Ga0265320_10026946 3300031240 Bacteria 3003
92 Ga0265340_10038712 3300031247 Bacteria 2357
93 Ga0265339_10000394 3300031249 Bacteria 34437
94 Ga0265327_10000004 3300031251 Bacteria 803973
95 Ga0307516_10002416 3300031730 Bacteria 24976
96 Ga0307413_10131098 3300031824 Bacteria 1716
97 Ga0307416_100176488 3300032002 Bacteria 1997
98 Ga0307411_10013600 3300032005 Bacteria 4497
99 Ga0373943_0036227 3300035170 Bacteria 2362
100 Ga0373927_0019897 3300035695 Bacteria 4402
101 Ga0373933_0017366 3300035724 Bacteria 4038
102 Ga0373937_0007865 3300036401 Bacteria 9242
103 Ga0395899_0000361 3300037312 Bacteria 55292
104 Ga0395900_0000237 3300037418 Bacteria 86507
105 Ga0395905_0004340 3300037471 Bacteria 14768
106 Ga0395905_0110582 3300037471 Bacteria 2580
107 Ga0395901_0000028 3300038443 Bacteria 242653
108 Ga0436365_1014486 3300039437 Bacteria 2773
109 Ga0436365_1798095 3300039437 Bacteria 4951
110 Ga0436360_1089422 3300039438 Bacteria 1637
111 Ga0436363_0583059 3300039450 Bacteria 2364
112 Ga0466963_0121628 3300044694 Bacteria 1797
113 Ga0466968_0000008 3300044735 Bacteria 73540
114 Ga0466959_0053719 3300045049 Bacteria 2944
115 Ga0495629_0025382 3300046459 Bacteria 4213
116 Ga0495641_0021405 3300046461 Bacteria 3254
117 Ga0495580_0000015 3300046472 Bacteria 94575
118 Ga0495580_0066184 3300046472 Bacteria 2530
119 Ga0495580_0159043 3300046472 Bacteria 1564
120 Ga0495605_0000838 3300046474 Bacteria 21580
121 Ga0495623_0027857 3300046679 Bacteria 3637
122 Ga0495613_0067931 3300046689 Bacteria 2601
123 Ga0495581_0009473 3300047315 Bacteria 5636
124 Ga0495581_0010772 3300047315 Bacteria 5288
125 Ga0495674_0113399 3300047319 Bacteria 2296
126 Ga0495593_0010523 3300047673 Bacteria 5338
127 Ga0495602_0093860 3300048088 Bacteria 2481
128 Ga0496100_0030678 3300048903 Bacteria 3336
129 Ga0496102_0111484 3300048905 Bacteria 2551
130 Ga0496102_0152479 3300048905 Bacteria 2172
131 Ga0496104_0073510 3300048907 Bacteria 3252
132 Ga0496105_0081626 3300048908 Bacteria 2670
133 Ga0496109_0142023 3300048912 Bacteria 2245
134 Ga0496111_0126362 3300048914 Bacteria 1890
135 Ga0496112_0160716 3300048915 Bacteria 2213
136 Ga0496112_0203058 3300048915 Bacteria 1941
137 Ga0496114_0097946 3300048917 Bacteria 2499
138 Ga0496115_0038076 3300048918 Bacteria 3814
139 Ga0496116_0018198 3300048919 Bacteria 5426
140 Ga0496117_0000024 3300048920 Bacteria 418750
141 Ga0496117_0000095 3300048920 Bacteria 198731
142 Ga0496118_0000003 3300048921 Bacteria 773148
143 Ga0496118_0000014 3300048921 Bacteria 561628
144 Ga0496119_0000871 3300048922 Bacteria 39656
145 Ga0496119_0002402 3300048922 Bacteria 20561
146 Ga0496119_0024220 3300048922 Bacteria 4274
147 Ga0496120_0001744 3300048923 Bacteria 24694
148 Ga0496120_0015664 3300048923 Bacteria 4989
149 Ga0496120_0027349 3300048923 Bacteria 3510
150 Ga0496121_0034360 3300048924 Bacteria 4565
151 Ga0496121_0046988 3300048924 Bacteria 3687
152 Ga0496125_0004128 3300048928 Bacteria 16962
153 Ga0496125_0004954 3300048928 Bacteria 15066
154 Ga0496125_0021998 3300048928 Bacteria 5930
155 Ga0496125_0061301 3300048928 Bacteria 3017
156 Ga0496126_0000004 3300048929 Bacteria 925026
157 Ga0496126_0126411 3300048929 Bacteria 2212
158 Ga0501298_002738 3300049521 Bacteria 2690
159 Ga0501032_0001536 3300049569 Bacteria 18414
160 Ga0501034_0014512 3300049571 Bacteria 8112
161 Ga0501036_0030910 3300049572 Bacteria 4525
162 Ga0501039_0000878 3300049575 Bacteria 21820
163 Ga0501043_0010144 3300049579 Bacteria 7384
164 Ga0501079_0125111 3300049741 Bacteria 2000
165 Ga0501044_0054891 3300049823 Bacteria 4093
166 nmdc:mga06r32_7979_c1 3300050510 Bacteria 9515
167 nmdc:mga0rr50_94297_c1 3300050513 Bacteria 2337
168 nmdc:mga08x19_41429_c1 3300050514 Bacteria 2933
169 Ga0500643_000470 3300053087 Bacteria 29540
170 Ga0500652_001019 3300053131 Bacteria 9130
171 Ga0500568_0008278 3300053139 Bacteria 5029
172 2523383984 2523231044 Bacteria 6434991
173 2599516457 2599185190 Bacteria 6285678
174 2599895834 2599185290 Bacteria 6289611
175 2643893404 2643221576 Bacteria 5214352
176 2643962454 2643221590 Bacteria 5214697
177 2672335389 2671180330 Bacteria 5521719
178 2672335391 2671180330 Bacteria 5521719
179 2722884066 2721755523 Bacteria 6430384
180 2739236826 2738543011 Bacteria 5731169
181 2753035753 2751185725 Bacteria 5740550
182 2753326222 2751185792 Bacteria 5739090
183 2809197041 2808606439 Bacteria 5952208
184 2812330781 2811994874 Bacteria 5367947
185 2839139069 2839138175 Bacteria 6549354
186 2881647516 2881644220 Bacteria 5302661
187 2889305719 2889300758 Bacteria 5690814
188 2919419469 2919414237 Bacteria 5429133
189 2928143015 2928142448 Bacteria 5288925
190 2939743854 2939743619 Bacteria 5762299
191 3006980874 3006978542 Bacteria 5328100
192 Ga0373925_0129858
193 Ga0055532_1000024
194 Ga0055536_1015780
195 Ga0068868_100178467
196 Ga0070673_100102874
197 Ga0070667_100109929
198 Ga0070709_10051384
199 Ga0070713_100018083
200 Ga0070713_100028139
201 Ga0070713_100047795
202 Ga0070711_100094110
203 Ga0070708_100010514
204 Ga0070708_100012399
205 Ga0070708_100031697
206 Ga0070678_100038850
207 Ga0070706_100024072
208 Ga0070706_100034402
209 Ga0070707_100019932
210 Ga0070707_100034872
211 Ga0070698_100037470
212 Ga0070699_100007927
213 Ga0070697_100013319
214 Ga0070695_100015005
215 Ga0070665_100003894
216 Ga0070665_100033979
217 Ga0070665_100064240
218 Ga0068855_100001305
219 Ga0068855_100002844
220 Ga0068855_100005007
221 Ga0068859_100045697
222 Ga0068863_100034198
223 Ga0068863_100074372
224 Ga0070717_10000530
225 Ga0070717_10022533
226 Ga0070717_10057261
227 Ga0070716_100090214
228 Ga0075370_10023330
229 Ga0075436_100064843
230 Ga0097620_100045699
231 Ga0079104_1000011
232 Ga0075435_100071981
233 Ga0105240_10000791
234 Ga0105240_10000962
235 Ga0105243_10000624
236 Ga0105241_10010889
237 Ga0105242_10006473
238 Ga0105237_10006489
239 Ga0105237_10015576
240 Ga0105238_10146865
241 Ga0157378_10147025
242 Ga0157372_10319993
243 Ga0157375_10171873
244 Ga0182008_10005736
245 Ga0182007_10000520
246 Ga0163161_10000665
247 Ga0213876_10096894
248 Ga0213875_10051819
249 Ga0209147_100020
250 Ga0209676_1008173
251 Ga0209025_1001160
252 Ga0207642_10029500
253 Ga0207684_10004670
254 Ga0207684_10053629
255 Ga0207695_10004353
256 Ga0207695_10237726
257 Ga0207671_10034503
258 Ga0207693_10006287
259 Ga0207663_10070150
260 Ga0207646_10004480
261 Ga0207646_10061668
262 Ga0207700_10027784
263 Ga0207686_10034352
264 Ga0207709_10000074
265 Ga0207709_10000373
266 Ga0207665_10095351
267 Ga0207667_10002958
268 Ga0207667_10013161
269 Ga0207658_10127166
270 Ga0207677_10174121
271 Ga0207641_10039259
272 Ga0207648_10120565
273 Ga0209281_1000005
274 Ga0268266_10007998
275 Ga0268266_10014539
276 Ga0268266_10034735
277 Ga0265336_10002068
278 Ga0265338_10005433
279 Ga0265338_10062666
280 Ga0307511_10016985
281 Ga0265328_10038666
282 Ga0265320_10026946
283 Ga0265340_10038712
284 Ga0265339_10000394
285 Ga0265327_10000004
286 Ga0307516_10002416
287 Ga0307413_10131098
288 Ga0307416_100176488
289 Ga0307411_10013600
290 Ga0373943_0036227
291 Ga0373927_0019897
292 Ga0373933_0017366
293 Ga0373937_0007865
294 Ga0395899_0000361
295 Ga0395900_0000237
296 Ga0395905_0004340
297 Ga0395905_0110582
298 Ga0395901_0000028
299 Ga0436365_1014486
300 Ga0436365_1798095
301 Ga0436360_1089422
302 Ga0436363_0583059
303 Ga0466963_0121628
304 Ga0466968_0000008
305 Ga0466959_0053719
306 Ga0495629_0025382
307 Ga0495641_0021405
308 Ga0495580_0000015
309 Ga0495580_0066184
310 Ga0495580_0159043
311 Ga0495605_0000838
312 Ga0495623_0027857
313 Ga0495613_0067931
314 Ga0495581_0009473
315 Ga0495581_0010772
316 Ga0495674_0113399
317 Ga0495593_0010523
318 Ga0495602_0093860
319 Ga0496100_0030678
320 Ga0496102_0111484
321 Ga0496102_0152479
322 Ga0496104_0073510
323 Ga0496105_0081626
324 Ga0496109_0142023
325 Ga0496111_0126362
326 Ga0496112_0160716
327 Ga0496112_0203058
328 Ga0496114_0097946
329 Ga0496115_0038076
330 Ga0496116_0018198
331 Ga0496117_0000024
332 Ga0496117_0000095
333 Ga0496118_0000003
334 Ga0496118_0000014
335 Ga0496119_0000871
336 Ga0496119_0002402
337 Ga0496119_0024220
338 Ga0496120_0001744
339 Ga0496120_0015664
340 Ga0496120_0027349
341 Ga0496121_0034360
342 Ga0496121_0046988
343 Ga0496125_0004128
344 Ga0496125_0004954
345 Ga0496125_0021998
346 Ga0496125_0061301
347 Ga0496126_0000004
348 Ga0496126_0126411
349 Ga0501298_002738
350 Ga0501032_0001536
351 Ga0501034_0014512
352 Ga0501036_0030910
353 Ga0501039_0000878
354 Ga0501043_0010144
355 Ga0501079_0125111
356 Ga0501044_0054891
357 nmdc:mga06r32_7979_c1
358 nmdc:mga0rr50_94297_c1
359 nmdc:mga08x19_41429_c1
360 Ga0500643_000470
361 Ga0500652_001019
362 Ga0500568_0008278
363 2523383984
364 2599516457
365 2599895834
366 2643893404
367 2643962454
368 2672335389
369 2672335391
370 2722884066
371 2739236826
372 2753035753
373 2753326222
374 2809197041
375 2812330781
376 2839139069
377 2881647516
378 2889305719
379 2919419469
380 2928143015
381 2939743854
382 3006980874

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

30

498

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zum-assembly1.cif.gz_D human mitochondrial aldehyde dehydrogenase asian variant, aldh2*2, apo form 0.9825 4 480
5l13-assembly2.cif.gz_E structure of aldh2 in complex with 2p3 0.9819 4 480
2onm-assembly1.cif.gz_D human mitochondrial aldehyde dehydrogenase asian variant, aldh2*2, complexed with nad+ 0.9818 4 480
4qf6-assembly1.cif.gz_C structure of aldehyde dehydrogenase from bacillus cereus, e194s mutant 0.9818 3 479
4o6r-assembly1.cif.gz_D crystal structure of a putative aldehyde dehydrogenase from burkholderia cenocepacia 0.9817 1 481
ID Description Score Start End Superfamily
af_Q2FV10_3_257_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9925 5 251 3.40.605.10
af_P40047_292_478_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9919 253 443 3.40.309.10
3ed6A02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9902 252 445 3.40.309.10
af_Q2G1J0_261_449_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9902 254 442 3.40.309.10
af_Q9JLJ2_258_468_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9893 253 460 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A5R2N0D3-F1-model_v4 Aldehyde dehydrogenase family protein 0.9931 224 355 GO:0016620
AF-A0A5R2N764-F1-model_v4 Aldehyde dehydrogenase family protein 0.9903 317 452 GO:0016620
AF-A0A7J6SZ74-F1-model_v4 4-trimethylaminobutyraldehyde dehydrogenase 0.9898 211 371 GO:0016620
AF-S7SUG3-F1-model_v4 Aldehyde dehydrogenase (EC 1.2.1.3) 0.9895 112 479 GO:0004029
AF-A0A5C8X3K7-F1-model_v4 deleted 0.9892 83 439

Map