F294374

General Info

Members Datasets Scaffolds Average Seq Length
191 118 382 446

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0235515|Ga0395901_0235515_391_1860
Length 489
Sequence MTTAQETAQAQQQEARDKTLRKKVLIKSYGCQMNAYDATRMADLLAGQGYDETDAVDQADLVVLNTCHIREKAAEKVYSELGRLRVLKRERAEAGLETTIAVAGCVAQAEGAEILHRSPAVDLVVGPQSYHRLPAMLAEAAQHRRPVDTEFPVDDKFGALPRPESRRIRARGHSAFVTVQEGCDKFCSFCVVPYTRGAEASRPPERVLEEIRHLAEAGVREITLLGQNVNAYHGEARDGRLWSLARLLEAAASIEGVARLRYMTSHPRDMGDDLIAAHRDLPQLMPYLHLPVQSGSDAMLAAMNRKHDRALYLRLIDKVRAACPGIALSSDFIVGFPGESDADFDDTMRLVEEIGFAAAFSFKYSRRPGTPAATRAAQVEDKVALDRLHALQALILDQQTAFNRATIGRTLPVLVEKPGRHPGQVTGKSPYLQPVHFDAPPALVGDIVAVRIEGQIANSLSGRLIGHGAANHASGSRPAAVALASGGIP

Samples

Sample ID Description Type Environment
1 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
67 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
77 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
87 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
90 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
100 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
101 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
104 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
105 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
106 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
111 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
112 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
113 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
114 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
115 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
116 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
117 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.57
Nodule 0
Rhizoplane 0
Rhizosphere 96.86
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395901_0235515 3300038443 Bacteria 1911
2 Ga0070680_100000181 3300005336 Bacteria 40747
3 Ga0070680_100019213 3300005336 Bacteria 5413
4 Ga0070691_10000062 3300005341 Bacteria 30042
5 Ga0070661_100003495 3300005344 Bacteria 10818
6 Ga0070661_100066244 3300005344 Bacteria 2654
7 Ga0070709_10000238 3300005434 Bacteria 35500
8 Ga0070714_100193734 3300005435 Bacteria 1856
9 Ga0070713_100000011 3300005436 Bacteria 146314
10 Ga0070713_100142965 3300005436 Bacteria 2121
11 Ga0070705_100036666 3300005440 Bacteria 2759
12 Ga0070708_100086255 3300005445 Bacteria 2851
13 Ga0070681_10000002 3300005458 Bacteria 821814
14 Ga0070681_10264640 3300005458 Bacteria 1631
15 Ga0070699_100053818 3300005518 Bacteria 3483
16 Ga0070679_100000569 3300005530 Bacteria 31286
17 Ga0068853_100002089 3300005539 Bacteria 14817
18 Ga0068853_100034108 3300005539 Bacteria 4319
19 Ga0068853_100035533 3300005539 Bacteria 4233
20 Ga0070665_100238701 3300005548 Bacteria 1818
21 Ga0070704_100024575 3300005549 Bacteria 3954
22 Ga0068855_100003662 3300005563 Bacteria 18790
23 Ga0068855_100020022 3300005563 Bacteria 8034
24 Ga0068857_100000131 3300005577 Bacteria 45365
25 Ga0068856_100001764 3300005614 Bacteria 22636
26 Ga0068856_100014277 3300005614 Bacteria 7680
27 Ga0068863_100109116 3300005841 Bacteria 2634
28 Ga0068860_100023834 3300005843 Bacteria 5917
29 Ga0081540_1009864 3300005983 Bacteria 6528
30 Ga0081539_10000845 3300005985 Bacteria 58627
31 Ga0070716_100073156 3300006173 Bacteria 2021
32 Ga0070712_100000014 3300006175 Bacteria 108668
33 Ga0070712_100023551 3300006175 Bacteria 4069
34 Ga0070712_100186699 3300006175 Bacteria 1619
35 Ga0075434_100024602 3300006871 Bacteria 5888
36 Ga0075429_100029506 3300006880 Bacteria 4763
37 Ga0075436_100000047 3300006914 Bacteria 72907
38 Ga0075436_100053729 3300006914 Bacteria 2781
39 Ga0099794_10042903 3300007265 Bacteria 2158
40 Ga0105240_10000055 3300009093 Bacteria 225380
41 Ga0105240_10000355 3300009093 Bacteria 86025
42 Ga0105240_10009397 3300009093 Bacteria 13845
43 Ga0105240_10022153 3300009093 Bacteria 8430
44 Ga0105240_10119278 3300009093 Bacteria 3178
45 Ga0105240_10127956 3300009093 Bacteria 3049
46 Ga0114129_10078446 3300009147 Bacteria 4593
47 Ga0114129_10219797 3300009147 Bacteria 2563
48 Ga0105241_10008503 3300009174 Bacteria 7546
49 Ga0105241_10056461 3300009174 Bacteria 3010
50 Ga0105248_10000001 3300009177 Bacteria 1881304
51 Ga0105237_10006560 3300009545 Bacteria 12870
52 Ga0105237_10024396 3300009545 Bacteria 6187
53 Ga0105238_10001566 3300009551 Bacteria 22947
54 Ga0105238_10003360 3300009551 Bacteria 15962
55 Ga0105238_10003708 3300009551 Bacteria 15199
56 Ga0105238_10011994 3300009551 Bacteria 8730
57 Ga0105239_10001751 3300010375 Bacteria 28614
58 Ga0105239_10004849 3300010375 Bacteria 15916
59 Ga0105239_10016401 3300010375 Bacteria 8193
60 Ga0105239_10017432 3300010375 Bacteria 7943
61 Ga0105239_10042931 3300010375 Bacteria 4954
62 Ga0157373_10003426 3300013100 Bacteria 12004
63 Ga0157370_10019917 3300013104 Bacteria 6712
64 Ga0157374_10176157 3300013296 Bacteria 2088
65 Ga0157379_10009643 3300014968 Bacteria 8405
66 Ga0157379_10033676 3300014968 Bacteria 4569
67 Ga0213876_10032299 3300021384 Bacteria 2761
68 Ga0207699_10000233 3300025906 Bacteria 31418
69 Ga0207684_10016010 3300025910 Bacteria 6440
70 Ga0207707_10000002 3300025912 Bacteria 1142054
71 Ga0207695_10000012 3300025913 Bacteria 840961
72 Ga0207695_10003622 3300025913 Bacteria 21591
73 Ga0207695_10007707 3300025913 Bacteria 13633
74 Ga0207671_10043682 3300025914 Bacteria 3314
75 Ga0207693_10000018 3300025915 Bacteria 138365
76 Ga0207693_10000276 3300025915 Bacteria 47566
77 Ga0207660_10002147 3300025917 Bacteria 13092
78 Ga0207660_10002454 3300025917 Bacteria 12181
79 Ga0207649_10020868 3300025920 Bacteria 3762
80 Ga0207649_10048137 3300025920 Bacteria 2628
81 Ga0207652_10000174 3300025921 Bacteria 69094
82 Ga0207694_10000006 3300025924 Bacteria 631109
83 Ga0207700_10000005 3300025928 Bacteria 394836
84 Ga0207664_10160025 3300025929 Bacteria 1920
85 Ga0207665_10130579 3300025939 Bacteria 1783
86 Ga0207711_10000001 3300025941 Bacteria 1325674
87 Ga0207667_10000026 3300025949 Bacteria 343713
88 Ga0207667_10002838 3300025949 Bacteria 21514
89 Ga0207640_10101023 3300025981 Bacteria 2022
90 Ga0207639_10051856 3300026041 Bacteria 3123
91 Ga0207702_10000680 3300026078 Bacteria 36910
92 Ga0207702_10001063 3300026078 Bacteria 28134
93 Ga0207641_10091204 3300026088 Bacteria 2666
94 Ga0207674_10000112 3300026116 Bacteria 94220
95 Ga0207674_10023077 3300026116 Bacteria 6672
96 Ga0207698_10022229 3300026142 Bacteria 4403
97 Ga0265338_10000011 3300028800 Bacteria 433370
98 Ga0265338_10024780 3300028800 Bacteria 6116
99 Ga0265338_10182726 3300028800 Bacteria 1597
100 Ga0265330_10004377 3300031235 Bacteria 7170
101 Ga0265328_10000065 3300031239 Bacteria 59034
102 Ga0265328_10002424 3300031239 Bacteria 8364
103 Ga0265328_10011192 3300031239 Bacteria 3591
104 Ga0265325_10000009 3300031241 Bacteria 184273
105 Ga0265325_10000094 3300031241 Bacteria 62066
106 Ga0265325_10005771 3300031241 Bacteria 7592
107 Ga0265329_10014483 3300031242 Bacteria 2782
108 Ga0265340_10000018 3300031247 Bacteria 90851
109 Ga0265340_10001250 3300031247 Bacteria 14598
110 Ga0265339_10000320 3300031249 Bacteria 38805
111 Ga0265339_10004286 3300031249 Bacteria 9747
112 Ga0265339_10016597 3300031249 Bacteria 4386
113 Ga0265339_10097341 3300031249 Bacteria 1535
114 Ga0265331_10000009 3300031250 Bacteria 314950
115 Ga0265331_10008693 3300031250 Bacteria 5754
116 Ga0265331_10013547 3300031250 Bacteria 4379
117 Ga0265331_10016121 3300031250 Bacteria 3930
118 Ga0265331_10033035 3300031250 Bacteria 2560
119 Ga0265331_10058637 3300031250 Bacteria 1822
120 Ga0265327_10009057 3300031251 Bacteria 7273
121 Ga0265327_10024585 3300031251 Bacteria 3533
122 Ga0265316_10000540 3300031344 Bacteria 42651
123 Ga0265316_10002525 3300031344 Bacteria 18916
124 Ga0265316_10083025 3300031344 Bacteria 2454
125 Ga0265316_10133235 3300031344 Bacteria 1870
126 Ga0265313_10001518 3300031595 Bacteria 21606
127 Ga0265313_10003779 3300031595 Bacteria 12016
128 Ga0265313_10013403 3300031595 Bacteria 4922
129 Ga0265314_10014105 3300031711 Bacteria 6416
130 Ga0265314_10033089 3300031711 Bacteria 3796
131 Ga0265314_10040882 3300031711 Bacteria 3324
132 Ga0265342_10002218 3300031712 Bacteria 17059
133 Ga0265342_10092003 3300031712 Bacteria 1738
134 Ga0307409_100026394 3300031995 Bacteria 4095
135 Ga0373932_0008632 3300035112 Bacteria 2437
136 Ga0373955_0022611 3300035172 Bacteria 3191
137 Ga0373931_0008538 3300035691 Bacteria 4863
138 Ga0373933_0031320 3300035724 Bacteria 3085
139 Ga0373937_0000823 3300036401 Bacteria 26584
140 Ga0373937_0043608 3300036401 Bacteria 4095
141 Ga0373925_0180160 3300037068 Bacteria 1672
142 Ga0395898_0050305 3300037466 Bacteria 4079
143 Ga0395901_0019410 3300038443 Bacteria 6951
144 Ga0400486_07290 3300038742 Bacteria 8863
145 Ga0436365_1338091 3300039437 Bacteria 15988
146 Ga0453684_0094051 3300044712 Bacteria 3689
147 Ga0495664_0027669 3300046477 Bacteria 3307
148 Ga0495664_0069203 3300046477 Bacteria 2107
149 Ga0495628_0171543 3300046516 Bacteria 1645
150 Ga0495652_0057691 3300046529 Bacteria 3291
151 Ga0495665_0011194 3300046531 Bacteria 4857
152 Ga0495587_0024544 3300046536 Bacteria 3693
153 Ga0495645_0006785 3300046543 Bacteria 7955
154 Ga0495589_0071510 3300046794 Bacteria 1695
155 Ga0495675_0035029 3300047444 Bacteria 3207
156 Ga0495602_0048009 3300048088 Bacteria 3842
157 Ga0501033_0016968 3300049570 Bacteria 5504
158 Ga0501037_0023573 3300049573 Bacteria 4550
159 Ga0501037_0062031 3300049573 Bacteria 2726
160 Ga0501042_0129269 3300049578 Bacteria 1820
161 Ga0501047_0019198 3300049581 Bacteria 6557
162 Ga0501047_0022811 3300049581 Bacteria 6009
163 Ga0501067_0028693 3300049583 Bacteria 3083
164 Ga0501067_0035797 3300049583 Bacteria 2757
165 Ga0501067_0069016 3300049583 Bacteria 1957
166 Ga0501068_0122342 3300049584 Bacteria 1623
167 Ga0501069_0006574 3300049585 Bacteria 6077
168 Ga0501070_0010315 3300049586 Bacteria 7896
169 Ga0501072_0175456 3300049588 Bacteria 1710
170 Ga0501072_0207563 3300049588 Bacteria 1561
171 Ga0501073_0071461 3300049589 Bacteria 2418
172 Ga0501074_0168314 3300049590 Bacteria 1565
173 Ga0501079_0003964 3300049741 Bacteria 10936
174 Ga0501079_0015599 3300049741 Bacteria 5801
175 Ga0501080_0009003 3300049742 Bacteria 9084
176 Ga0501081_0012913 3300049743 Bacteria 5494
177 Ga0501081_0153047 3300049743 Bacteria 1658
178 Ga0501035_0002619 3300049822 Bacteria 17542
179 Ga0501035_0011937 3300049822 Bacteria 8039
180 Ga0501044_0022013 3300049823 Bacteria 6796
181 Ga0501044_0283837 3300049823 Bacteria 1588
182 Ga0501044_0355204 3300049823 Bacteria 1384
183 nmdc:mga06r32_22380_c1 3300050510 Bacteria 5843
184 nmdc:mga08x19_36698_c1 3300050514 Bacteria 3105
185 nmdc:mga08x19_62_c1 3300050514 Bacteria 114601
186 Ga0500562_000090 3300053108 Bacteria 37346
187 Ga0500568_0026588 3300053139 Bacteria 2427
188 Ga0500637_0001206 3300053178 Bacteria 10790
189 Ga0501084_0012603 3300054114 Bacteria 7003
190 Ga0501082_0125859 3300060353 Bacteria 2222
191 Ga0530510_0118412 3300061734 Bacteria 1943
192 Ga0395901_0235515
193 Ga0070680_100000181
194 Ga0070680_100019213
195 Ga0070691_10000062
196 Ga0070661_100003495
197 Ga0070661_100066244
198 Ga0070709_10000238
199 Ga0070714_100193734
200 Ga0070713_100000011
201 Ga0070713_100142965
202 Ga0070705_100036666
203 Ga0070708_100086255
204 Ga0070681_10000002
205 Ga0070681_10264640
206 Ga0070699_100053818
207 Ga0070679_100000569
208 Ga0068853_100002089
209 Ga0068853_100034108
210 Ga0068853_100035533
211 Ga0070665_100238701
212 Ga0070704_100024575
213 Ga0068855_100003662
214 Ga0068855_100020022
215 Ga0068857_100000131
216 Ga0068856_100001764
217 Ga0068856_100014277
218 Ga0068863_100109116
219 Ga0068860_100023834
220 Ga0081540_1009864
221 Ga0081539_10000845
222 Ga0070716_100073156
223 Ga0070712_100000014
224 Ga0070712_100023551
225 Ga0070712_100186699
226 Ga0075434_100024602
227 Ga0075429_100029506
228 Ga0075436_100000047
229 Ga0075436_100053729
230 Ga0099794_10042903
231 Ga0105240_10000055
232 Ga0105240_10000355
233 Ga0105240_10009397
234 Ga0105240_10022153
235 Ga0105240_10119278
236 Ga0105240_10127956
237 Ga0114129_10078446
238 Ga0114129_10219797
239 Ga0105241_10008503
240 Ga0105241_10056461
241 Ga0105248_10000001
242 Ga0105237_10006560
243 Ga0105237_10024396
244 Ga0105238_10001566
245 Ga0105238_10003360
246 Ga0105238_10003708
247 Ga0105238_10011994
248 Ga0105239_10001751
249 Ga0105239_10004849
250 Ga0105239_10016401
251 Ga0105239_10017432
252 Ga0105239_10042931
253 Ga0157373_10003426
254 Ga0157370_10019917
255 Ga0157374_10176157
256 Ga0157379_10009643
257 Ga0157379_10033676
258 Ga0213876_10032299
259 Ga0207699_10000233
260 Ga0207684_10016010
261 Ga0207707_10000002
262 Ga0207695_10000012
263 Ga0207695_10003622
264 Ga0207695_10007707
265 Ga0207671_10043682
266 Ga0207693_10000018
267 Ga0207693_10000276
268 Ga0207660_10002147
269 Ga0207660_10002454
270 Ga0207649_10020868
271 Ga0207649_10048137
272 Ga0207652_10000174
273 Ga0207694_10000006
274 Ga0207700_10000005
275 Ga0207664_10160025
276 Ga0207665_10130579
277 Ga0207711_10000001
278 Ga0207667_10000026
279 Ga0207667_10002838
280 Ga0207640_10101023
281 Ga0207639_10051856
282 Ga0207702_10000680
283 Ga0207702_10001063
284 Ga0207641_10091204
285 Ga0207674_10000112
286 Ga0207674_10023077
287 Ga0207698_10022229
288 Ga0265338_10000011
289 Ga0265338_10024780
290 Ga0265338_10182726
291 Ga0265330_10004377
292 Ga0265328_10000065
293 Ga0265328_10002424
294 Ga0265328_10011192
295 Ga0265325_10000009
296 Ga0265325_10000094
297 Ga0265325_10005771
298 Ga0265329_10014483
299 Ga0265340_10000018
300 Ga0265340_10001250
301 Ga0265339_10000320
302 Ga0265339_10004286
303 Ga0265339_10016597
304 Ga0265339_10097341
305 Ga0265331_10000009
306 Ga0265331_10008693
307 Ga0265331_10013547
308 Ga0265331_10016121
309 Ga0265331_10033035
310 Ga0265331_10058637
311 Ga0265327_10009057
312 Ga0265327_10024585
313 Ga0265316_10000540
314 Ga0265316_10002525
315 Ga0265316_10083025
316 Ga0265316_10133235
317 Ga0265313_10001518
318 Ga0265313_10003779
319 Ga0265313_10013403
320 Ga0265314_10014105
321 Ga0265314_10033089
322 Ga0265314_10040882
323 Ga0265342_10002218
324 Ga0265342_10092003
325 Ga0307409_100026394
326 Ga0373932_0008632
327 Ga0373955_0022611
328 Ga0373931_0008538
329 Ga0373933_0031320
330 Ga0373937_0000823
331 Ga0373937_0043608
332 Ga0373925_0180160
333 Ga0395898_0050305
334 Ga0395901_0019410
335 Ga0400486_07290
336 Ga0436365_1338091
337 Ga0453684_0094051
338 Ga0495664_0027669
339 Ga0495664_0069203
340 Ga0495628_0171543
341 Ga0495652_0057691
342 Ga0495665_0011194
343 Ga0495587_0024544
344 Ga0495645_0006785
345 Ga0495589_0071510
346 Ga0495675_0035029
347 Ga0495602_0048009
348 Ga0501033_0016968
349 Ga0501037_0023573
350 Ga0501037_0062031
351 Ga0501042_0129269
352 Ga0501047_0019198
353 Ga0501047_0022811
354 Ga0501067_0028693
355 Ga0501067_0035797
356 Ga0501067_0069016
357 Ga0501068_0122342
358 Ga0501069_0006574
359 Ga0501070_0010315
360 Ga0501072_0175456
361 Ga0501072_0207563
362 Ga0501073_0071461
363 Ga0501074_0168314
364 Ga0501079_0003964
365 Ga0501079_0015599
366 Ga0501080_0009003
367 Ga0501081_0012913
368 Ga0501081_0153047
369 Ga0501035_0002619
370 Ga0501035_0011937
371 Ga0501044_0022013
372 Ga0501044_0283837
373 Ga0501044_0355204
374 nmdc:mga06r32_22380_c1
375 nmdc:mga08x19_36698_c1
376 nmdc:mga08x19_62_c1
377 Ga0500562_000090
378 Ga0500568_0026588
379 Ga0500637_0001206
380 Ga0501084_0012603
381 Ga0501082_0125859
382 Ga0530510_0118412

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00919

UPF0004

Uncharacterized protein family UPF0004

23

126

0.94

PF01938

TRAM

TRAM domain

404

465

0.93

PF04055

Radical_SAM

Radical SAM superfamily

177

351

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qgq-assembly4.cif.gz_D crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.9181 149 441
2qgq-assembly1.cif.gz_A crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.916 149 441
2qgq-assembly4.cif.gz_D crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.9086 149 441
2qgq-assembly1.cif.gz_A crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.903 149 441
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.8707 2 441
ID Description Score Start End Superfamily
af_P0AEI1_145_378_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9801 149 379 3.80.30.20
af_F1LV76_14_128_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9726 265 374 3.30.750.200
4jc0B03 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9701 266 378 3.30.750.200
af_P0AEI1_145_378_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9636 149 379 3.80.30.20
af_Q2FZ02_212_444_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9551 151 382 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A4Q3K8N4-F1-model_v4 deleted 0.9901 1 114
AF-A0A6G3WU15-F1-model_v4 Radical SAM protein 0.9865 266 388 GO:0005829
GO:0035597
GO:0051539
AF-A0A381H6Q8-F1-model_v4 deleted 0.9853 197 441
AF-A0A526QFH5-F1-model_v4 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.9827 2 134 GO:0005829
GO:0035597
GO:0046872
GO:0051539
AF-A0A7V7CXH0-F1-model_v4 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.9796 1 146 GO:0005829
GO:0035597
GO:0046872
GO:0051539

Map