F294499

General Info

Members Datasets Scaffolds Average Seq Length
191 149 382 262

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0046875|Ga0495638_0046875_81_1016
Length 311
Sequence MPLIPLTRQLLDRARLFGTIRVTRLRSTYPAVVLDDADEEDAMASQEITDNPIVPGHSVDFGLAAGDYAKHRAGFPERFFERLATQLDLKPMMRALDIGTGTGTVARGLARLGLTVEAVDPSEPMMDQARILDDAEGVAVAYRVGKAEALPFPDERFDMVTAGQCWHWFDRLAAAREAMRVLKPGGVLVHCHFDWLPIPGNVVEATEALIMRYNPAWRADGGTGLHGHNMPDLSVAGFRDIETASFDIDQPYSHEAWRGRIRASAGIKATLDEDGVARFDADHAALLATRFPQNPLLVPHRVWWATARKPS

Samples

Sample ID Description Type Environment
1 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
44 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
45 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
67 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
72 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
78 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
79 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
80 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
81 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
82 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
83 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
87 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
88 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
93 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
94 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
98 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
111 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
112 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
127 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
128 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
129 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
130 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
131 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
132 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
133 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
134 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
135 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
136 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
137 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
138 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
139 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
141 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
142 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
143 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
144 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
145 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
146 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
147 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
148 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
149 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.29
Metatranscriptomes 0
Isolates 4.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.42
Nodule 0
Rhizoplane 0.52
Rhizosphere 81.15
Stem 0
Stem Tuber 0
Unclassified 13.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495638_0046875 3300046460 Bacteria 2713
2 JGI25406J46586_10014205 3300003203 Bacteria 3393
3 rootH1_10061062 3300003316 Bacteria 3000
4 rootH2_10062164 3300003320 Bacteria 2613
5 Ga0070690_100278238 3300005330 Bacteria 1193
6 Ga0070692_10054472 3300005345 Bacteria 2088
7 Ga0070669_100542491 3300005353 Unclassified 969
8 Ga0070675_100277799 3300005354 Bacteria 1471
9 Ga0070688_100020865 3300005365 Bacteria 3818
10 Ga0070662_100264096 3300005457 Bacteria 1388
11 Ga0070681_10001011 3300005458 Bacteria 23772
12 Ga0070681_10207192 3300005458 Unclassified 1877
13 Ga0070707_100435075 3300005468 Bacteria 1272
14 Ga0070699_100035387 3300005518 Bacteria 4317
15 Ga0070679_100026629 3300005530 Bacteria 5685
16 Ga0070679_100178875 3300005530 Bacteria 2094
17 Ga0070696_100010462 3300005546 Bacteria 6218
18 Ga0070693_100018773 3300005547 Bacteria 3617
19 Ga0068854_100293816 3300005578 Bacteria 1312
20 Ga0068856_100033732 3300005614 Bacteria 5013
21 Ga0070702_100422640 3300005615 Unclassified 959
22 Ga0068859_100031062 3300005617 Bacteria 5362
23 Ga0068864_100298620 3300005618 Bacteria 1507
24 Ga0081455_10015315 3300005937 Bacteria 7456
25 Ga0081540_1106440 3300005983 Bacteria 1195
26 Ga0081539_10001758 3300005985 Bacteria 34544
27 Ga0081539_10019099 3300005985 Bacteria 4710
28 Ga0070716_100064280 3300006173 Bacteria 2133
29 Ga0070712_100189269 3300006175 Bacteria 1609
30 Ga0075428_100039567 3300006844 Bacteria 5190
31 Ga0075430_100058366 3300006846 Bacteria 3244
32 Ga0075430_100529647 3300006846 Bacteria 972
33 Ga0075431_100003350 3300006847 Bacteria 15534
34 Ga0075434_100018787 3300006871 Bacteria 6682
35 Ga0075434_100123490 3300006871 Bacteria 2605
36 Ga0075434_100374184 3300006871 Bacteria 1445
37 Ga0097620_100031063 3300006931 Bacteria 5362
38 Ga0111539_10586861 3300009094 Unclassified 1298
39 Ga0111539_10728350 3300009094 Bacteria 1154
40 Ga0105247_10037980 3300009101 Bacteria 2938
41 Ga0114129_10397948 3300009147 Bacteria 1816
42 Ga0105241_10177317 3300009174 Bacteria 1765
43 Ga0105249_10016510 3300009553 Bacteria 6549
44 Ga0157371_10407086 3300013102 Bacteria 996
45 Ga0163162_10425496 3300013306 Bacteria 1460
46 Ga0157372_10025431 3300013307 Bacteria 6437
47 Ga0163163_10119078 3300014325 Bacteria 2673
48 Ga0157380_10017694 3300014326 Bacteria 5278
49 Ga0163161_10050682 3300017792 Unclassified 3005
50 Ga0209233_1003518 3300025261 Bacteria 5505
51 Ga0209758_1000005 3300025297 Bacteria 1368918
52 Ga0209758_1023806 3300025297 Unclassified 2753
53 Ga0209257_1003311 3300025304 Bacteria 13996
54 Ga0207647_10003260 3300025904 Bacteria 12187
55 Ga0207707_10009450 3300025912 Bacteria 8454
56 Ga0207707_10017308 3300025912 Bacteria 6282
57 Ga0207671_10439400 3300025914 Bacteria 1039
58 Ga0207693_10228445 3300025915 Bacteria 1461
59 Ga0207660_10077743 3300025917 Bacteria 2430
60 Ga0207657_10040059 3300025919 Bacteria 4155
61 Ga0207657_10146644 3300025919 Bacteria 1924
62 Ga0207652_10379261 3300025921 Bacteria 1276
63 Ga0207646_10362741 3300025922 Bacteria 1309
64 Ga0207694_10218911 3300025924 Bacteria 1552
65 Ga0207690_10002130 3300025932 Bacteria 12122
66 Ga0207706_10228775 3300025933 Bacteria 1627
67 Ga0207667_10120709 3300025949 Bacteria 2701
68 Ga0207668_10101149 3300025972 Unclassified 2142
69 Ga0207708_10097879 3300026075 Bacteria 2267
70 Ga0207702_10081206 3300026078 Bacteria 2815
71 Ga0207676_10086558 3300026095 Unclassified 2560
72 Ga0207674_10102402 3300026116 Bacteria 2844
73 Ga0207428_10004863 3300027907 Bacteria 12663
74 Ga0268265_10073489 3300028380 Bacteria 2670
75 Ga0268264_10536649 3300028381 Bacteria 1146
76 Ga0307513_10214109 3300031456 Unclassified 1755
77 Ga0307513_10256307 3300031456 Bacteria 1542
78 Ga0307508_10056514 3300031616 Bacteria 3475
79 Ga0307409_100496765 3300031995 Bacteria 1187
80 Ga0307411_10512633 3300032005 Bacteria 1016
81 Ga0373923_0057601 3300035111 Bacteria 1643
82 Ga0373939_0015189 3300035114 Bacteria 2011
83 Ga0373931_0114006 3300035691 Unclassified 1537
84 Ga0395899_0045585 3300037312 Bacteria 3267
85 Ga0395905_0000160 3300037471 Bacteria 111265
86 Ga0395905_0231941 3300037471 Bacteria 1726
87 Ga0436364_0473057 3300037853 Unclassified 2149
88 Ga0395901_0000356 3300038443 Bacteria 55523
89 Ga0395901_0245201 3300038443 Unclassified 1868
90 Ga0400484_23034 3300038725 Bacteria 1251
91 Ga0400490_48219 3300038726 Bacteria 1041
92 Ga0451577_0342722 3300042876 Unclassified 1356
93 Ga0466969_0010915 3300044656 Bacteria 4812
94 Ga0466972_0092743 3300044658 Bacteria 1431
95 Ga0466982_0000003 3300044672 Bacteria 417243
96 Ga0453683_0015420 3300044673 Bacteria 4949
97 Ga0466966_0003322 3300044684 Bacteria 10598
98 Ga0453684_0002291 3300044712 Bacteria 47029
99 Ga0466968_0055247 3300044735 Bacteria 1703
100 Ga0466960_0005631 3300044901 Bacteria 4971
101 Ga0466959_0056779 3300045049 Bacteria 2856
102 Ga0451576_0207909 3300045051 Bacteria 2044
103 Ga0451576_0507889 3300045051 Archaea 1266
104 Ga0495651_0035217 3300046462 Bacteria 3900
105 Ga0495653_0390978 3300046463 Bacteria 886
106 Ga0495654_0107699 3300046530 Bacteria 1275
107 Ga0495597_0013356 3300046542 Bacteria 3936
108 Ga0495622_0006095 3300046557 Bacteria 5603
109 Ga0495668_0047655 3300046616 Bacteria 2379
110 Ga0495625_0018897 3300046660 Bacteria 5364
111 Ga0495658_0227038 3300046683 Unclassified 1170
112 Ga0495671_0019372 3300046692 Bacteria 3600
113 Ga0495604_0008762 3300047317 Bacteria 7994
114 Ga0495602_0007784 3300048088 Bacteria 11197
115 Ga0496102_0216842 3300048905 Unclassified 1804
116 Ga0501033_0006052 3300049570 Bacteria 9485
117 Ga0501033_0287741 3300049570 Bacteria 1159
118 Ga0501036_0105676 3300049572 Bacteria 2381
119 Ga0501036_0276082 3300049572 Bacteria 1407
120 Ga0501037_0007936 3300049573 Bacteria 7777
121 Ga0501038_0045057 3300049574 Bacteria 3830
122 Ga0501039_0023426 3300049575 Bacteria 4739
123 Ga0501043_0006968 3300049579 Bacteria 9001
124 Ga0501043_0008509 3300049579 Bacteria 8079
125 Ga0501043_0411894 3300049579 Unclassified 1020
126 Ga0501047_0053313 3300049581 Bacteria 3910
127 Ga0501047_0123275 3300049581 Bacteria 2472
128 Ga0501048_0040716 3300049582 Bacteria 3328
129 Ga0501067_0130403 3300049583 Bacteria 1399
130 Ga0501068_0074469 3300049584 Bacteria 2075
131 Ga0501068_0254585 3300049584 Bacteria 1119
132 Ga0501069_0004815 3300049585 Bacteria 6986
133 Ga0501070_0017469 3300049586 Bacteria 6023
134 Ga0501070_0087297 3300049586 Bacteria 2582
135 Ga0501070_0132257 3300049586 Unclassified 2061
136 Ga0501070_0165578 3300049586 Unclassified 1822
137 Ga0501070_0346967 3300049586 Unclassified 1205
138 Ga0501073_0006259 3300049589 Bacteria 8877
139 Ga0501073_0010862 3300049589 Bacteria 6667
140 Ga0501073_0143516 3300049589 Bacteria 1654
141 Ga0501074_0045493 3300049590 Bacteria 3175
142 Ga0501079_0389967 3300049741 Unclassified 1092
143 Ga0501080_0007356 3300049742 Bacteria 9939
144 Ga0501080_0100396 3300049742 Bacteria 2685
145 Ga0501080_0198192 3300049742 Bacteria 1844
146 Ga0501080_0204361 3300049742 Bacteria 1812
147 Ga0501083_0010121 3300049744 Bacteria 6645
148 Ga0501083_0133039 3300049744 Bacteria 1630
149 Ga0501035_0006160 3300049822 Bacteria 11290
150 Ga0501044_0019359 3300049823 Bacteria 7284
151 Ga0501044_0019486 3300049823 Bacteria 7255
152 nmdc:mga05p37_39534_c1 3300050507 Bacteria 5792
153 nmdc:mga0qj67_52296_c1 3300050509 Bacteria 3232
154 nmdc:mga06r32_180766_c1 3300050510 Bacteria 2095
155 nmdc:mga06r32_306703_c1 3300050510 Unclassified 1573
156 nmdc:mga06r32_374155_c1 3300050510 Unclassified 1407
157 nmdc:mga06r32_494455_c1 3300050510 Bacteria 1200
158 nmdc:mga06r32_559_c2 3300050510 Bacteria 30241
159 nmdc:mga06r32_657178_c1 3300050510 Unclassified 1016
160 nmdc:mga08y16_42676_c1 3300050511 Bacteria 4750
161 nmdc:mga08y16_604642_c1 3300050511 Bacteria 1105
162 nmdc:mga08y16_895806_c1 3300050511 Unclassified 874
163 nmdc:mga0n895_71919_c1 3300050512 Bacteria 3430
164 nmdc:mga0a205_510424_c1 3300050515 Bacteria 1059
165 Ga0500643_004983 3300053087 Bacteria 5835
166 Ga0500644_0019958 3300053088 Bacteria 1986
167 Ga0500646_0011278 3300053090 Bacteria 2297
168 Ga0500651_0001078 3300053093 Bacteria 13468
169 Ga0500651_0031062 3300053093 Bacteria 3363
170 Ga0500556_0000025 3300053104 Bacteria 167307
171 Ga0500594_0002926 3300053118 Bacteria 3729
172 Ga0500595_000185 3300053119 Bacteria 42447
173 Ga0500642_0000001 3300053130 Bacteria 1468402
174 Ga0500642_0000410 3300053130 Bacteria 14047
175 Ga0500568_0007084 3300053139 Bacteria 5542
176 Ga0500588_0126139 3300053146 Unclassified 907
177 Ga0500633_0117123 3300053160 Bacteria 990
178 Ga0500645_001661 3300053730 Bacteria 10922
179 Ga0501084_0012014 3300054114 Bacteria 7168
180 Ga0501084_0126148 3300054114 Bacteria 2154
181 Ga0501082_0065493 3300060353 Bacteria 3129
182 Ga0501082_0245862 3300060353 Bacteria 1557
183 2538832236 2537561836 Bacteria 3910579
184 2617916370 2617270889 Bacteria 9064343
185 2643830245 2643221562 Bacteria 4048635
186 2886630128 2886627955 Bacteria 7618130
187 2913846071 2913844669 Bacteria 8381711
188 2913915387 2913912277 Bacteria 9037797
189 2913945381 2913939268 Bacteria 8559644
190 2939612555 2939611941 Bacteria 3892017
191 642605169 642555144 Bacteria 9059191
192 Ga0495638_0046875
193 JGI25406J46586_10014205
194 rootH1_10061062
195 rootH2_10062164
196 Ga0070690_100278238
197 Ga0070692_10054472
198 Ga0070669_100542491
199 Ga0070675_100277799
200 Ga0070688_100020865
201 Ga0070662_100264096
202 Ga0070681_10001011
203 Ga0070681_10207192
204 Ga0070707_100435075
205 Ga0070699_100035387
206 Ga0070679_100026629
207 Ga0070679_100178875
208 Ga0070696_100010462
209 Ga0070693_100018773
210 Ga0068854_100293816
211 Ga0068856_100033732
212 Ga0070702_100422640
213 Ga0068859_100031062
214 Ga0068864_100298620
215 Ga0081455_10015315
216 Ga0081540_1106440
217 Ga0081539_10001758
218 Ga0081539_10019099
219 Ga0070716_100064280
220 Ga0070712_100189269
221 Ga0075428_100039567
222 Ga0075430_100058366
223 Ga0075430_100529647
224 Ga0075431_100003350
225 Ga0075434_100018787
226 Ga0075434_100123490
227 Ga0075434_100374184
228 Ga0097620_100031063
229 Ga0111539_10586861
230 Ga0111539_10728350
231 Ga0105247_10037980
232 Ga0114129_10397948
233 Ga0105241_10177317
234 Ga0105249_10016510
235 Ga0157371_10407086
236 Ga0163162_10425496
237 Ga0157372_10025431
238 Ga0163163_10119078
239 Ga0157380_10017694
240 Ga0163161_10050682
241 Ga0209233_1003518
242 Ga0209758_1000005
243 Ga0209758_1023806
244 Ga0209257_1003311
245 Ga0207647_10003260
246 Ga0207707_10009450
247 Ga0207707_10017308
248 Ga0207671_10439400
249 Ga0207693_10228445
250 Ga0207660_10077743
251 Ga0207657_10040059
252 Ga0207657_10146644
253 Ga0207652_10379261
254 Ga0207646_10362741
255 Ga0207694_10218911
256 Ga0207690_10002130
257 Ga0207706_10228775
258 Ga0207667_10120709
259 Ga0207668_10101149
260 Ga0207708_10097879
261 Ga0207702_10081206
262 Ga0207676_10086558
263 Ga0207674_10102402
264 Ga0207428_10004863
265 Ga0268265_10073489
266 Ga0268264_10536649
267 Ga0307513_10214109
268 Ga0307513_10256307
269 Ga0307508_10056514
270 Ga0307409_100496765
271 Ga0307411_10512633
272 Ga0373923_0057601
273 Ga0373939_0015189
274 Ga0373931_0114006
275 Ga0395899_0045585
276 Ga0395905_0000160
277 Ga0395905_0231941
278 Ga0436364_0473057
279 Ga0395901_0000356
280 Ga0395901_0245201
281 Ga0400484_23034
282 Ga0400490_48219
283 Ga0451577_0342722
284 Ga0466969_0010915
285 Ga0466972_0092743
286 Ga0466982_0000003
287 Ga0453683_0015420
288 Ga0466966_0003322
289 Ga0453684_0002291
290 Ga0466968_0055247
291 Ga0466960_0005631
292 Ga0466959_0056779
293 Ga0451576_0207909
294 Ga0451576_0507889
295 Ga0495651_0035217
296 Ga0495653_0390978
297 Ga0495654_0107699
298 Ga0495597_0013356
299 Ga0495622_0006095
300 Ga0495668_0047655
301 Ga0495625_0018897
302 Ga0495658_0227038
303 Ga0495671_0019372
304 Ga0495604_0008762
305 Ga0495602_0007784
306 Ga0496102_0216842
307 Ga0501033_0006052
308 Ga0501033_0287741
309 Ga0501036_0105676
310 Ga0501036_0276082
311 Ga0501037_0007936
312 Ga0501038_0045057
313 Ga0501039_0023426
314 Ga0501043_0006968
315 Ga0501043_0008509
316 Ga0501043_0411894
317 Ga0501047_0053313
318 Ga0501047_0123275
319 Ga0501048_0040716
320 Ga0501067_0130403
321 Ga0501068_0074469
322 Ga0501068_0254585
323 Ga0501069_0004815
324 Ga0501070_0017469
325 Ga0501070_0087297
326 Ga0501070_0132257
327 Ga0501070_0165578
328 Ga0501070_0346967
329 Ga0501073_0006259
330 Ga0501073_0010862
331 Ga0501073_0143516
332 Ga0501074_0045493
333 Ga0501079_0389967
334 Ga0501080_0007356
335 Ga0501080_0100396
336 Ga0501080_0198192
337 Ga0501080_0204361
338 Ga0501083_0010121
339 Ga0501083_0133039
340 Ga0501035_0006160
341 Ga0501044_0019359
342 Ga0501044_0019486
343 nmdc:mga05p37_39534_c1
344 nmdc:mga0qj67_52296_c1
345 nmdc:mga06r32_180766_c1
346 nmdc:mga06r32_306703_c1
347 nmdc:mga06r32_374155_c1
348 nmdc:mga06r32_494455_c1
349 nmdc:mga06r32_559_c2
350 nmdc:mga06r32_657178_c1
351 nmdc:mga08y16_42676_c1
352 nmdc:mga08y16_604642_c1
353 nmdc:mga08y16_895806_c1
354 nmdc:mga0n895_71919_c1
355 nmdc:mga0a205_510424_c1
356 Ga0500643_004983
357 Ga0500644_0019958
358 Ga0500646_0011278
359 Ga0500651_0001078
360 Ga0500651_0031062
361 Ga0500556_0000025
362 Ga0500594_0002926
363 Ga0500595_000185
364 Ga0500642_0000001
365 Ga0500642_0000410
366 Ga0500568_0007084
367 Ga0500588_0126139
368 Ga0500633_0117123
369 Ga0500645_001661
370 Ga0501084_0012014
371 Ga0501084_0126148
372 Ga0501082_0065493
373 Ga0501082_0245862
374 2538832236
375 2617916370
376 2643830245
377 2886630128
378 2913846071
379 2913915387
380 2913945381
381 2939612555
382 642605169

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

96

190

0.98

PF13649

Methyltransf_25

Methyltransferase domain

95

186

0.95

PF13847

Methyltransf_31

Methyltransferase domain

89

230

0.86

PF13489

Methyltransf_23

Methyltransferase domain

68

229

0.85

PF01209

Ubie_methyltran

ubiE/COQ5 methyltransferase family

75

203

0.84

PF08242

Methyltransf_12

Methyltransferase domain

96

188

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1sqg-assembly1.cif.gz_A the crystal structure of the e. coli fmu apoenzyme at 1.65 a resolution 0.8586 34 136
3fpj-assembly1.cif.gz_A crystal structure of e81q mutant of mtnas in complex with s-adenosylmethionine 0.8393 22 135
2nxe-assembly2.cif.gz_B t. thermophilus ribosomal protein l11 methyltransferase (prma) in complex with s-adenosyl-l-methionine 0.8337 28 188
3dmh-assembly1.cif.gz_A t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex with adomet and guanosine 0.8263 22 135
5bxy-assembly2.cif.gz_B crystal structure of rna methyltransferase from salinibacter ruber in complex with s-adenosyl-l-homocysteine 0.8105 17 135
ID Description Score Start End Superfamily
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9067 34 93 3.40.50.150
af_A0A1D6QMW6_179_313_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8671 40 134 3.40.50.150
af_Q9P3E7_8_144_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8641 35 138 3.40.50.150
af_A0A144A060_258_376_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8477 37 105 3.40.50.150
af_P9WK01_14_228_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8474 8 236 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A7W1NM91-F1-model_v4 Class I SAM-dependent methyltransferase 0.9897 24 254 GO:0008757
GO:0032259
AF-A0A7W1NM91-F1-model_v4 Class I SAM-dependent methyltransferase 0.9813 24 254 GO:0008757
GO:0032259
AF-A0A7V7MPH6-F1-model_v4 Class I SAM-dependent methyltransferase 0.9797 1 258 GO:0008757
GO:0032259
AF-A0A7V7MPH6-F1-model_v4 Class I SAM-dependent methyltransferase 0.9759 1 258 GO:0008757
GO:0032259
AF-A0A1I0H9F2-F1-model_v4 Methyltransferase domain-containing protein 0.9682 5 254 GO:0008757
GO:0032259

Map