F294706

General Info

Members Datasets Scaffolds Average Seq Length
191 103 382 658

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0003867|Ga0501047_0003867_9529_11832
Length 751
Sequence MNARHRAVWLLLAALLITTVVYWPGLSGSWLFDDYPNIVDNPGVHPHEVSIPALVRAALSSPASEFKRPMSSLSFAANYLVSGLAPYSWKLANLIIHLLNGVLVYLLAKALLRVVVGAHSRIGSGTGSVRENAGREGRRENLSRTGCAPTRNAGTVAALIAGGWMLLPINLTGVLYVVQREESLANLFVLIGLVGYVAGRRRMLDAWENPLPPPPCKQGEGQSGHAPFHTPGEEKNRASAPSPAGRGGLGWGGFWLCTASLILPTALGLLAKETAVMLPLYAFLIEATLFRFSRAPALVGAQPVRESFFAHRVRSYRMAGLFIVVLLLPMLAGLGWLLPNALNPSTWATRDFTLGTRLLSEARIICDYIAWTLLPTPHVLSFYHDQYPISAGLLSPWTTLASILALAGLVAFAIWQRNRRPLVALGVALFLGCQLLTGTVLPLELVYEHRNYFASFGLLLAVVPWLVGHALAGLMLWWAGLTAATAFDWGDPLRLAETLAARAPDSPRAQYELGRSYIMYSHYNPASPYTRLAYAPLERAAALPKSSILPQQALIYMNSRMHLPLKNAWWDSLIAKLKARAPGVQDESSLQALTQCARGGHCTLPEKRMVQAFQAALDHPHPSARLQATYGDYAWNVMGDRSLGLRMTEAAVKTAPDEPAYHITLARMQATMGHINEAATQIKALKSLDIGGQLDSAIHEIQLQTDAATPSDSISYPDGPTRAQPDNQHSNPFRPATPHIQSNERITKKYR

Samples

Sample ID Description Type Environment
1 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
12 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
13 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
14 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
15 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
16 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
17 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
40 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
41 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
42 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
43 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
44 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
51 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
52 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
55 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
76 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
77 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
78 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
79 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
80 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
81 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
82 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
83 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
84 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
85 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
88 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
91 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
100 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
101 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
102 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
103 2941471342 Luteibacter sp. 621 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.91
Metatranscriptomes 0
Isolates 2.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.51
Nodule 0
Rhizoplane 0.52
Rhizosphere 61.26
Stem 0
Stem Tuber 0
Unclassified 0.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501047_0003867 3300049581 Bacteria 14091
2 JGI24740J21852_10010389 3300001979 Bacteria 3591
3 JGI24735J21928_10000891 3300002067 Bacteria 10651
4 JGI25156J39149_1000908 3300002705 Bacteria 14537
5 JGI25156J39149_1002154 3300002705 Bacteria 7400
6 JGI25162J39368_1000279 3300002737 Bacteria 48608
7 JGI25162J39368_1000469 3300002737 Bacteria 31140
8 JGI25162J39368_1000539 3300002737 Bacteria 28147
9 JGI25157J39369_1000276 3300002741 Bacteria 37680
10 JGI25157J39369_1000440 3300002741 Bacteria 26544
11 JGI25157J39369_1000875 3300002741 Bacteria 14537
12 JGI25164J39214_1000030 3300002772 Bacteria 145974
13 JGI25164J39214_1000339 3300002772 Bacteria 29674
14 JGI25165J46597_1000057 3300003214 Bacteria 217135
15 JGI25165J46597_1000535 3300003214 Bacteria 35299
16 rootH1_10051245 3300003316 Bacteria 13497
17 rootL2_10189220 3300003322 Bacteria 8422
18 Ga0055539_1000436 3300003752 Bacteria 14640
19 Ga0055539_1000590 3300003752 Bacteria 10125
20 Ga0055533_1000293 3300003756 Bacteria 25431
21 Ga0055533_1000490 3300003756 Bacteria 14640
22 Ga0055533_1001002 3300003756 Bacteria 8209
23 Ga0055525_1000093 3300003759 Bacteria 138423
24 Ga0055527_1000045 3300003760 Bacteria 111375
25 Ga0055535_1000811 3300003761 Bacteria 22607
26 Ga0055535_1002999 3300003761 Bacteria 5169
27 Ga0055542_1000303 3300003762 Bacteria 54819
28 Ga0055542_1000360 3300003762 Bacteria 47620
29 Ga0055529_1000344 3300003763 Bacteria 51835
30 Ga0070658_10010590 3300005327 Bacteria 7389
31 Ga0070666_10000010 3300005335 Bacteria 264789
32 Ga0070682_100002113 3300005337 Bacteria 11033
33 Ga0070682_100011691 3300005337 Bacteria 5019
34 Ga0070660_100020288 3300005339 Bacteria 4883
35 Ga0070659_100005818 3300005366 Bacteria 8881
36 Ga0070659_100006447 3300005366 Bacteria 8475
37 Ga0070659_100018580 3300005366 Bacteria 5247
38 Ga0070659_100028155 3300005366 Bacteria 4336
39 Ga0070659_100049624 3300005366 Bacteria 3301
40 Ga0070694_100027833 3300005444 Bacteria 3674
41 Ga0070681_10014109 3300005458 Bacteria 7953
42 Ga0070665_100001241 3300005548 Bacteria 30925
43 Ga0068855_100002334 3300005563 Bacteria 23422
44 Ga0068855_100002841 3300005563 Bacteria 21294
45 Ga0068855_100006322 3300005563 Bacteria 14435
46 Ga0068855_100011543 3300005563 Bacteria 10670
47 Ga0068857_100000762 3300005577 Bacteria 23959
48 Ga0068854_100000513 3300005578 Bacteria 23559
49 Ga0068854_100000518 3300005578 Bacteria 23422
50 Ga0068854_100006163 3300005578 Bacteria 7613
51 Ga0068856_100000496 3300005614 Bacteria 43611
52 Ga0068856_100000622 3300005614 Bacteria 38711
53 Ga0105240_10001368 3300009093 Bacteria 41909
54 Ga0105240_10001602 3300009093 Bacteria 38393
55 Ga0105240_10005876 3300009093 Bacteria 18176
56 Ga0105240_10007909 3300009093 Bacteria 15336
57 Ga0105240_10010214 3300009093 Bacteria 13212
58 Ga0105237_10000007 3300009545 Bacteria 367690
59 Ga0105237_10000055 3300009545 Bacteria 152778
60 Ga0105238_10079423 3300009551 Bacteria 3271
61 Ga0105239_10004061 3300010375 Bacteria 17670
62 Ga0157371_10005752 3300013102 Bacteria 10388
63 Ga0157371_10011837 3300013102 Bacteria 6699
64 Ga0157370_10001680 3300013104 Bacteria 27267
65 Ga0157370_10003229 3300013104 Bacteria 19252
66 Ga0157369_10003133 3300013105 Bacteria 19766
67 Ga0157369_10006081 3300013105 Bacteria 14008
68 Ga0157369_10022624 3300013105 Bacteria 7010
69 Ga0163162_10000492 3300013306 Bacteria 36642
70 Ga0157372_10006872 3300013307 Bacteria 12107
71 Ga0182008_10010656 3300014497 Bacteria 4916
72 Ga0182008_10015712 3300014497 Bacteria 3947
73 Ga0182008_10027223 3300014497 Bacteria 2898
74 Ga0182006_1003481 3300015261 Bacteria 8036
75 Ga0182006_1006374 3300015261 Bacteria 5495
76 Ga0182006_1007824 3300015261 Bacteria 4871
77 Ga0182007_10001038 3300015262 Bacteria 15204
78 Ga0182007_10002062 3300015262 Bacteria 10331
79 Ga0182007_10002578 3300015262 Bacteria 8922
80 Ga0182007_10002741 3300015262 Bacteria 8613
81 Ga0182007_10003753 3300015262 Bacteria 7090
82 Ga0182007_10004742 3300015262 Bacteria 6116
83 Ga0182005_1000035 3300015265 Bacteria 172168
84 Ga0183369_1013 3300015685 Bacteria 222738
85 Ga0209674_100107 3300025226 Bacteria 151298
86 Ga0209674_100352 3300025226 Bacteria 26526
87 Ga0209674_100354 3300025226 Bacteria 26166
88 Ga0209672_100005 3300025228 Bacteria 1069303
89 Ga0209672_100124 3300025228 Bacteria 80646
90 Ga0209672_100261 3300025228 Bacteria 39032
91 Ga0209563_100045 3300025230 Bacteria 377102
92 Ga0207427_100053 3300025231 Bacteria 217191
93 Ga0207427_100157 3300025231 Bacteria 77115
94 Ga0209437_100108 3300025233 Bacteria 217191
95 Ga0209437_100254 3300025233 Bacteria 83422
96 Ga0209258_100006 3300025242 Bacteria 1069303
97 Ga0209258_100055 3300025242 Bacteria 337291
98 Ga0209646_1000473 3300025246 Bacteria 20173
99 Ga0209026_1000139 3300025250 Bacteria 115298
100 Ga0209026_1000172 3300025250 Bacteria 98917
101 Ga0209026_1000242 3300025250 Bacteria 70111
102 Ga0209026_1000628 3300025250 Bacteria 22181
103 Ga0209677_100379 3300025253 Bacteria 27214
104 Ga0209677_100574 3300025253 Bacteria 20207
105 Ga0209148_1000012 3300025254 Bacteria 1069303
106 Ga0209148_1000058 3300025254 Bacteria 357482
107 Ga0209759_1000211 3300025256 Bacteria 90002
108 Ga0209759_1000479 3300025256 Bacteria 44510
109 Ga0209759_1000794 3300025256 Bacteria 25805
110 Ga0209759_1004288 3300025256 Bacteria 5368
111 Ga0209129_1000770 3300025258 Bacteria 20350
112 Ga0209233_1000125 3300025261 Bacteria 217190
113 Ga0209233_1000252 3300025261 Bacteria 83708
114 Ga0209455_1000008 3300025272 Bacteria 1069303
115 Ga0209455_1000018 3300025272 Bacteria 718034
116 Ga0209455_1000095 3300025272 Bacteria 217487
117 Ga0209758_1000448 3300025297 Bacteria 68898
118 Ga0207680_10000002 3300025903 Bacteria 1018646
119 Ga0207705_10028948 3300025909 Bacteria 3950
120 Ga0207707_10004801 3300025912 Bacteria 11853
121 Ga0207695_10000777 3300025913 Bacteria 60373
122 Ga0207695_10001092 3300025913 Bacteria 47304
123 Ga0207695_10001389 3300025913 Bacteria 40906
124 Ga0207695_10005934 3300025913 Bacteria 16007
125 Ga0207695_10006001 3300025913 Bacteria 15882
126 Ga0207671_10000038 3300025914 Bacteria 227066
127 Ga0207671_10000347 3300025914 Bacteria 67818
128 Ga0207694_10038530 3300025924 Bacteria 3675
129 Ga0207690_10007553 3300025932 Bacteria 6452
130 Ga0207690_10010957 3300025932 Bacteria 5405
131 Ga0207690_10016914 3300025932 Bacteria 4447
132 Ga0207690_10023560 3300025932 Bacteria 3843
133 Ga0207667_10000917 3300025949 Bacteria 37580
134 Ga0207667_10001266 3300025949 Bacteria 31692
135 Ga0207667_10003120 3300025949 Bacteria 20507
136 Ga0207667_10032682 3300025949 Bacteria 5603
137 Ga0207640_10000196 3300025981 Bacteria 43199
138 Ga0207640_10000694 3300025981 Bacteria 19609
139 Ga0207640_10049190 3300025981 Bacteria 2728
140 Ga0207702_10000138 3300026078 Bacteria 87882
141 Ga0207702_10000154 3300026078 Bacteria 80923
142 Ga0207674_10000342 3300026116 Bacteria 59945
143 Ga0268266_10000004 3300028379 Bacteria 1495817
144 Ga0395899_0000477 3300037312 Bacteria 44765
145 Ga0395900_0000024 3300037418 Bacteria 323480
146 Ga0395898_0000520 3300037466 Bacteria 73491
147 Ga0395898_0000961 3300037466 Bacteria 45890
148 Ga0395898_0001948 3300037466 Bacteria 26115
149 Ga0395901_0000863 3300038443 Bacteria 33387
150 Ga0395901_0001108 3300038443 Bacteria 28639
151 Ga0395901_0006149 3300038443 Bacteria 12163
152 Ga0395901_0073763 3300038443 Bacteria 3560
153 Ga0451793_0511336 3300041452 Bacteria 3405
154 Ga0439459_0000066 3300042438 Bacteria 8716
155 Ga0466969_0013371 3300044656 Bacteria 4321
156 Ga0466969_0014418 3300044656 Bacteria 4156
157 Ga0466972_0001301 3300044658 Bacteria 12071
158 Ga0466982_0000003 3300044672 Bacteria 417243
159 Ga0466982_0000066 3300044672 Bacteria 28894
160 Ga0466965_0000793 3300044683 Bacteria 11896
161 Ga0466966_0000996 3300044684 Bacteria 18133
162 Ga0466961_0000335 3300044693 Bacteria 30912
163 Ga0466961_0000410 3300044693 Bacteria 27366
164 Ga0466961_0001205 3300044693 Bacteria 15904
165 Ga0466968_0011673 3300044735 Unclassified 3426
166 Ga0466970_0000541 3300044765 Bacteria 18476
167 Ga0466957_0000868 3300044842 Bacteria 15533
168 Ga0466959_0007374 3300045049 Bacteria 7715
169 Ga0466959_0010716 3300045049 Bacteria 6565
170 Ga0495638_0000100 3300046460 Bacteria 139296
171 Ga0495638_0000497 3300046460 Bacteria 46775
172 Ga0495650_0000561 3300046471 Bacteria 52692
173 Ga0495625_0004909 3300046660 Bacteria 12452
174 Ga0495686_0000189 3300047472 Bacteria 115804
175 Ga0496118_0000912 3300048921 Bacteria 46183
176 Ga0496118_0001491 3300048921 Bacteria 34941
177 Ga0496121_0017791 3300048924 Bacteria 7223
178 Ga0496121_0054393 3300048924 Bacteria 3345
179 Ga0496124_0003461 3300048927 Bacteria 19290
180 Ga0496125_0000512 3300048928 Bacteria 67294
181 Ga0496125_0008944 3300048928 Bacteria 10393
182 Ga0496126_0008849 3300048929 Bacteria 10790
183 Ga0496126_0009085 3300048929 Bacteria 10624
184 Ga0501033_0008746 3300049570 Bacteria 7829
185 Ga0501043_0056225 3300049579 Bacteria 3090
186 Ga0501044_0012470 3300049823 Bacteria 9205
187 Ga0466962_0006398 3300061719 Bacteria 5654
188 2842921526 2842918807 Bacteria 4289178
189 2884339763 2884338543 Bacteria 4610696
190 2939612801 2939611941 Bacteria 3892017
191 2941472532 2941471342 Bacteria 5018624
192 Ga0501047_0003867
193 JGI24740J21852_10010389
194 JGI24735J21928_10000891
195 JGI25156J39149_1000908
196 JGI25156J39149_1002154
197 JGI25162J39368_1000279
198 JGI25162J39368_1000469
199 JGI25162J39368_1000539
200 JGI25157J39369_1000276
201 JGI25157J39369_1000440
202 JGI25157J39369_1000875
203 JGI25164J39214_1000030
204 JGI25164J39214_1000339
205 JGI25165J46597_1000057
206 JGI25165J46597_1000535
207 rootH1_10051245
208 rootL2_10189220
209 Ga0055539_1000436
210 Ga0055539_1000590
211 Ga0055533_1000293
212 Ga0055533_1000490
213 Ga0055533_1001002
214 Ga0055525_1000093
215 Ga0055527_1000045
216 Ga0055535_1000811
217 Ga0055535_1002999
218 Ga0055542_1000303
219 Ga0055542_1000360
220 Ga0055529_1000344
221 Ga0070658_10010590
222 Ga0070666_10000010
223 Ga0070682_100002113
224 Ga0070682_100011691
225 Ga0070660_100020288
226 Ga0070659_100005818
227 Ga0070659_100006447
228 Ga0070659_100018580
229 Ga0070659_100028155
230 Ga0070659_100049624
231 Ga0070694_100027833
232 Ga0070681_10014109
233 Ga0070665_100001241
234 Ga0068855_100002334
235 Ga0068855_100002841
236 Ga0068855_100006322
237 Ga0068855_100011543
238 Ga0068857_100000762
239 Ga0068854_100000513
240 Ga0068854_100000518
241 Ga0068854_100006163
242 Ga0068856_100000496
243 Ga0068856_100000622
244 Ga0105240_10001368
245 Ga0105240_10001602
246 Ga0105240_10005876
247 Ga0105240_10007909
248 Ga0105240_10010214
249 Ga0105237_10000007
250 Ga0105237_10000055
251 Ga0105238_10079423
252 Ga0105239_10004061
253 Ga0157371_10005752
254 Ga0157371_10011837
255 Ga0157370_10001680
256 Ga0157370_10003229
257 Ga0157369_10003133
258 Ga0157369_10006081
259 Ga0157369_10022624
260 Ga0163162_10000492
261 Ga0157372_10006872
262 Ga0182008_10010656
263 Ga0182008_10015712
264 Ga0182008_10027223
265 Ga0182006_1003481
266 Ga0182006_1006374
267 Ga0182006_1007824
268 Ga0182007_10001038
269 Ga0182007_10002062
270 Ga0182007_10002578
271 Ga0182007_10002741
272 Ga0182007_10003753
273 Ga0182007_10004742
274 Ga0182005_1000035
275 Ga0183369_1013
276 Ga0209674_100107
277 Ga0209674_100352
278 Ga0209674_100354
279 Ga0209672_100005
280 Ga0209672_100124
281 Ga0209672_100261
282 Ga0209563_100045
283 Ga0207427_100053
284 Ga0207427_100157
285 Ga0209437_100108
286 Ga0209437_100254
287 Ga0209258_100006
288 Ga0209258_100055
289 Ga0209646_1000473
290 Ga0209026_1000139
291 Ga0209026_1000172
292 Ga0209026_1000242
293 Ga0209026_1000628
294 Ga0209677_100379
295 Ga0209677_100574
296 Ga0209148_1000012
297 Ga0209148_1000058
298 Ga0209759_1000211
299 Ga0209759_1000479
300 Ga0209759_1000794
301 Ga0209759_1004288
302 Ga0209129_1000770
303 Ga0209233_1000125
304 Ga0209233_1000252
305 Ga0209455_1000008
306 Ga0209455_1000018
307 Ga0209455_1000095
308 Ga0209758_1000448
309 Ga0207680_10000002
310 Ga0207705_10028948
311 Ga0207707_10004801
312 Ga0207695_10000777
313 Ga0207695_10001092
314 Ga0207695_10001389
315 Ga0207695_10005934
316 Ga0207695_10006001
317 Ga0207671_10000038
318 Ga0207671_10000347
319 Ga0207694_10038530
320 Ga0207690_10007553
321 Ga0207690_10010957
322 Ga0207690_10016914
323 Ga0207690_10023560
324 Ga0207667_10000917
325 Ga0207667_10001266
326 Ga0207667_10003120
327 Ga0207667_10032682
328 Ga0207640_10000196
329 Ga0207640_10000694
330 Ga0207640_10049190
331 Ga0207702_10000138
332 Ga0207702_10000154
333 Ga0207674_10000342
334 Ga0268266_10000004
335 Ga0395899_0000477
336 Ga0395900_0000024
337 Ga0395898_0000520
338 Ga0395898_0000961
339 Ga0395898_0001948
340 Ga0395901_0000863
341 Ga0395901_0001108
342 Ga0395901_0006149
343 Ga0395901_0073763
344 Ga0451793_0511336
345 Ga0439459_0000066
346 Ga0466969_0013371
347 Ga0466969_0014418
348 Ga0466972_0001301
349 Ga0466982_0000003
350 Ga0466982_0000066
351 Ga0466965_0000793
352 Ga0466966_0000996
353 Ga0466961_0000335
354 Ga0466961_0000410
355 Ga0466961_0001205
356 Ga0466968_0011673
357 Ga0466970_0000541
358 Ga0466957_0000868
359 Ga0466959_0007374
360 Ga0466959_0010716
361 Ga0495638_0000100
362 Ga0495638_0000497
363 Ga0495650_0000561
364 Ga0495625_0004909
365 Ga0495686_0000189
366 Ga0496118_0000912
367 Ga0496118_0001491
368 Ga0496121_0017791
369 Ga0496121_0054393
370 Ga0496124_0003461
371 Ga0496125_0000512
372 Ga0496125_0008944
373 Ga0496126_0008849
374 Ga0496126_0009085
375 Ga0501033_0008746
376 Ga0501043_0056225
377 Ga0501044_0012470
378 Ga0466962_0006398
379 2842921526
380 2884339763
381 2939612801
382 2941472532

MSA Aligner

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.8475 552 614
6w5q-assembly8.cif.gz_H structure of the globular c-terminal domain of p. aeruginosa lpop 0.8249 544 630
5fzr-assembly1.cif.gz_B designed tpr protein m4n delta c (cf i) 0.814 512 613
5fzq-assembly1.cif.gz_B designed tpr protein m4n 0.8095 512 613
1hh8-assembly1.cif.gz_A the active n-terminal region of p67phox: structure at 1.8 angstrom resolution and biochemical characterizations of the a128v mutant implicated in chronic granulomatous disease 0.8063 519 616
ID Description Score Start End Superfamily
af_E7EXH4_169_241_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8801 552 626 1.25.40.10
4gyyC01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8751 549 616 1.25.40.10
af_Q54F85_10_106_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8737 543 626 1.25.40.10
4gz3C01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8687 549 616 1.25.40.10
af_A0A0R4IV14_290_391_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8677 549 630 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A522HAU8-F1-model_v4 Tetratricopeptide repeat protein 0.9326 355 633 GO:0016020
AF-A0A522HAU8-F1-model_v4 Tetratricopeptide repeat protein 0.9261 355 633 GO:0016020
AF-T1AEW4-F1-model_v4 TPR repeat-containing protein 0.9016 32 465 GO:0016020
AF-T1AEW4-F1-model_v4 TPR repeat-containing protein 0.8918 32 465 GO:0016020
AF-A0A7Y1SDD1-F1-model_v4 deleted 0.8804 10 594

Map