F295467

General Info

Members Datasets Scaffolds Average Seq Length
192 148 131 472

Family's Representative Sequence

Representative Sequence 3300006178|Ga0075367_10005258|Ga0075367_100052586
Length 493
Sequence MVTRSVTQGSGATLEWEGTAVDWFTAPDYWMSRLVFQRALAGVYLVAFLTAALQFRALIGERGMLPVPRFTERVPFRRAPSLFQLHYSDRFFAACAWTGCAVSAALLAGLDSSLPLWAGMSLWLIPWALYLSIVNVGQTWYAFGWESLLLEVGFLAVFLGNDDIAPPFVVLFLLRWILFRVEFGAGLIKMRGDACWRKLTCLDYHHETQPMPGPLSWFFHHLPRPAHRVEVAANHVTQLVVPVLLFAPQPVATAAASLMIVTQLWLVLSGNFSWLNWITIVLAASALRLPADAPSVPNAPLWYEVLVLATAALLIGLSYHPVANMISRRQVMNRSFDPLHLVNTYGAFGSVSRLRYEVVIEGTSDDVPREDSDWREYEFKGKPGDPRHWPRQFAPYHLRLDWLMWFAALSPSYAGSWFGTLVERLLENDRDTLRLLRHSPFPPDAPPRFVRARLFRYRYTSWRELRETGACWERTFVREYLPPTRLAGVSRRS

Samples

Sample ID Description Type Environment
1 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
2 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
3 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
4 2643221548 Streptomyces sp. Root55 Isolate Unclassified
5 2643221578 Streptomyces sp. Root63 Isolate Unclassified
6 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
7 2643221647 Streptomyces sp. Root369 Isolate Unclassified
8 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
9 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
10 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
11 2643221714 Streptomyces sp. Root264 Isolate Unclassified
12 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
13 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
14 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
15 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
16 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
17 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
18 2808606448 Streptomyces sp. 193411 Isolate Unclassified
19 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
20 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
21 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
22 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
23 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
24 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
25 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
26 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
27 2862574272 Streptomyces sp. AcE210 Isolate Nodule
28 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
29 2867428634 Streptomyces sp. RP5T Isolate Unclassified
30 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
31 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
32 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
33 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
34 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
35 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
36 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
37 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
38 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
39 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
40 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
41 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
42 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
43 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
44 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
45 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
46 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
47 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
48 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
49 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
50 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
51 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
52 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
53 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
54 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
55 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
56 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
57 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
58 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
59 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
60 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
61 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
62 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
63 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
64 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
69 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
72 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
77 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
78 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
82 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
83 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
84 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
85 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
86 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
87 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
88 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
89 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
90 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
91 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
92 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
93 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
94 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
98 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
112 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
113 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
114 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
115 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
122 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
123 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
142 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
143 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
144 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
145 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
146 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
147 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
148 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.71
Metatranscriptomes 0.52
Isolates 31.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.73
Nodule 1.56
Rhizoplane 0.52
Rhizosphere 68.23
Stem 0
Stem Tuber 0
Unclassified 23.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10055768 3300003316 Bacteria 7296
2 rootH2_10106679 3300003320 Bacteria 4926
3 Ga0006562J51391_1089721 3300003578 Bacteria 4190
4 Ga0068855_100323204 3300005563 Bacteria 1705
5 Ga0075365_10046535 3300006038 Bacteria 2849
6 Ga0075367_10005258 3300006178 Bacteria 6399
7 Ga0182008_10000552 3300014497 Bacteria 27794
8 Ga0182007_10000554 3300015262 Bacteria 22069
9 Ga0183367_1016 3300015688 Bacteria 290198
10 Ga0209758_1004650 3300025297 Bacteria 11242
11 Ga0207426_1001003 3300025302 Bacteria 27442
12 Ga0207426_1003759 3300025302 Bacteria 7914
13 Ga0207426_1005230 3300025302 Bacteria 6009
14 Ga0207426_1015530 3300025302 Bacteria 2758
15 Ga0207667_10225498 3300025949 Bacteria 1920
16 Ga0209813_10008643 3300027866 Bacteria 2580
17 Ga0307517_10018152 3300028786 Bacteria 9117
18 Ga0307515_10010304 3300028794 Bacteria 17938
19 Ga0307515_10097093 3300028794 Bacteria 3605
20 Ga0307511_10000672 3300030521 Bacteria 36429
21 Ga0307511_10010986 3300030521 Bacteria 8940
22 Ga0307511_10036432 3300030521 Bacteria 4272
23 Ga0307512_10000801 3300030522 Bacteria 46484
24 Ga0307512_10029584 3300030522 Bacteria 4782
25 Ga0307513_10010474 3300031456 Bacteria 11618
26 Ga0307509_10006518 3300031507 Bacteria 15655
27 Ga0307508_10004718 3300031616 Bacteria 13199
28 Ga0307514_10084792 3300031649 Bacteria 2330
29 Ga0307518_10062952 3300031838 Bacteria 2693
30 Ga0307510_10006065 3300033180 Bacteria 14405
31 Ga0307510_10133293 3300033180 Bacteria 2149
32 Ga0395900_0280918 3300037418 Bacteria 1657
33 Ga0395898_0028089 3300037466 Bacteria 5641
34 Ga0395898_0059475 3300037466 Bacteria 3717
35 Ga0395898_0081402 3300037466 Bacteria 3122
36 Ga0439436_0004409 3300041404 Bacteria 4310
37 Ga0439439_0002688 3300041406 Bacteria 3812
38 Ga0451800_0574560 3300041459 Bacteria 1483
39 Ga0451841_1144142 3300041498 Bacteria 2520
40 Ga0451853_2629277 3300041512 Bacteria 9086
41 Ga0451853_2793826 3300041512 Bacteria 3894
42 Ga0439448_0019575 3300042005 Bacteria 2086
43 Ga0439449_0000106 3300042007 Bacteria 27038
44 Ga0439449_0015320 3300042007 Bacteria 2881
45 Ga0439457_000998 3300042014 Bacteria 8532
46 Ga0439457_002260 3300042014 Bacteria 5564
47 Ga0450894_001011 3300042131 Bacteria 4327
48 Ga0450903_000204 3300042138 Bacteria 13059
49 Ga0450906_002596 3300042145 Bacteria 3936
50 Ga0439458_0000476 3300042157 Bacteria 10265
51 Ga0466969_0009827 3300044656 Bacteria 5072
52 Ga0466969_0042409 3300044656 Bacteria 2272
53 Ga0466972_0000744 3300044658 Bacteria 15520
54 Ga0466972_0006192 3300044658 Bacteria 6014
55 Ga0466966_0008564 3300044684 Bacteria 6770
56 Ga0466961_0001840 3300044693 Bacteria 13167
57 Ga0466961_0009383 3300044693 Bacteria 6234
58 Ga0466963_0000926 3300044694 Bacteria 14971
59 Ga0466963_0040657 3300044694 Bacteria 3048
60 Ga0466971_0009123 3300044719 Bacteria 4337
61 Ga0466970_0000928 3300044765 Bacteria 14143
62 Ga0466970_0000949 3300044765 Bacteria 13989
63 Ga0466967_0059566 3300045976 Bacteria 3380
64 Ga0466967_0124477 3300045976 Bacteria 2387
65 Ga0466967_0238172 3300045976 Bacteria 1735
66 Ga0495603_0000582 3300046455 Bacteria 20529
67 Ga0495603_0002686 3300046455 Bacteria 10487
68 Ga0495629_0002488 3300046459 Bacteria 14131
69 Ga0495629_0014595 3300046459 Bacteria 5652
70 Ga0495629_0029404 3300046459 Bacteria 3897
71 Ga0495662_0000534 3300046476 Bacteria 17425
72 Ga0495664_0006041 3300046477 Bacteria 6676
73 Ga0495594_0000502 3300046499 Bacteria 19995
74 Ga0495594_0033304 3300046499 Bacteria 2801
75 Ga0495628_0030553 3300046516 Bacteria 4362
76 Ga0495630_0038431 3300046517 Bacteria 3580
77 Ga0495587_0003123 3300046536 Bacteria 11081
78 Ga0495645_0005263 3300046543 Bacteria 8862
79 Ga0495634_0005064 3300046642 Bacteria 10178
80 Ga0495611_0063527 3300046648 Bacteria 1680
81 Ga0495635_0006549 3300046663 Bacteria 8127
82 Ga0495657_0007655 3300046675 Bacteria 8315
83 Ga0495646_0005341 3300046680 Bacteria 8109
84 Ga0495613_0006123 3300046689 Bacteria 9002
85 Ga0495613_0043777 3300046689 Bacteria 3312
86 Ga0495613_0107260 3300046689 Bacteria 2015
87 Ga0495670_0022829 3300046691 Bacteria 3090
88 Ga0495589_0007527 3300046794 Bacteria 5704
89 Ga0495581_0000712 3300047315 Bacteria 17527
90 Ga0495604_0003200 3300047317 Bacteria 13084
91 Ga0495676_0005919 3300047321 Bacteria 11225
92 Ga0495676_0019320 3300047321 Bacteria 5994
93 Ga0495676_0040079 3300047321 Bacteria 3870
94 Ga0495687_001648 3300047443 Bacteria 20081
95 Ga0495675_0029205 3300047444 Bacteria 3516
96 Ga0495685_013456 3300047447 Bacteria 2778
97 Ga0495686_0106144 3300047472 Bacteria 1689
98 Ga0495593_0000888 3300047673 Bacteria 17377
99 Ga0495614_0000260 3300048089 Bacteria 20593
100 Ga0495614_0000841 3300048089 Bacteria 12989
101 Ga0501031_0061813 3300049568 Bacteria 2440
102 Ga0501032_0162406 3300049569 Bacteria 1466
103 Ga0501033_0015942 3300049570 Bacteria 5693
104 Ga0501033_0133342 3300049570 Bacteria 1798
105 Ga0501036_0003851 3300049572 Bacteria 12039
106 Ga0501036_0014468 3300049572 Bacteria 6572
107 Ga0501036_0082904 3300049572 Bacteria 2710
108 Ga0501036_0120054 3300049572 Bacteria 2220
109 Ga0501037_0036337 3300049573 Bacteria 3630
110 Ga0501038_0003979 3300049574 Bacteria 13722
111 Ga0501038_0004886 3300049574 Bacteria 12455
112 Ga0501038_0042835 3300049574 Bacteria 3941
113 Ga0501042_0044755 3300049578 Bacteria 3154
114 Ga0501043_0001841 3300049579 Bacteria 18183
115 Ga0501047_0079123 3300049581 Bacteria 3161
116 Ga0501047_0126079 3300049581 Bacteria 2440
117 Ga0501048_0053058 3300049582 Bacteria 2884
118 Ga0501070_0001946 3300049586 Bacteria 18227
119 Ga0501035_0011752 3300049822 Bacteria 8109
120 Ga0501035_0015570 3300049822 Bacteria 7015
121 Ga0501035_0050236 3300049822 Bacteria 3737
122 Ga0501035_0053191 3300049822 Bacteria 3622
123 Ga0501035_0109289 3300049822 Bacteria 2424
124 Ga0501035_0153827 3300049822 Bacteria 1994
125 Ga0501044_0008772 3300049823 Bacteria 11059
126 Ga0501044_0013052 3300049823 Bacteria 8989
127 Ga0501044_0029002 3300049823 Bacteria 5837
128 Ga0501044_0220746 3300049823 Bacteria 1846
129 nmdc:mga06z11_3522_c1 3300050494 Bacteria 6065
130 nmdc:mga04h51_2391_c1 3300050495 Bacteria 4449
131 Ga0500640_032138 3300053095 Bacteria 2302

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041459 Ga0451800_0574560 Ga0451800_0574560_221_1462 395
2 3300042014 Ga0439457_000998 Ga0439457_000998_12_1304 417
3 3300041498 Ga0451841_1144142 Ga0451841_1144142_446_1759 428
4 3300046689 Ga0495613_0107260 Ga0495613_0107260_227_1648 436
5 3300031838 Ga0307518_10062952 Ga0307518_100629522 441
6 3300025297 Ga0209758_1004650 Ga0209758_10046505 447
7 3300025302 Ga0207426_1015530 Ga0207426_10155302 447
8 3300046459 Ga0495629_0014595 Ga0495629_0014595_3669_5105 450
9 3300046499 Ga0495594_0000502 Ga0495594_0000502_3072_4508 450
10 3300047321 Ga0495676_0019320 Ga0495676_0019320_3159_4595 450
11 3300003578 Ga0006562J51391_1089721 Ga0006562J51391_10897212 451
12 3300041512 Ga0451853_2793826 Ga0451853_2793826_1214_2659 451
13 3300046648 Ga0495611_0063527 Ga0495611_0063527_79_1515 452
14 3300046455 Ga0495603_0000582 Ga0495603_0000582_6467_7903 453
15 3300046459 Ga0495629_0002488 Ga0495629_0002488_273_1709 453
16 3300046689 Ga0495613_0043777 Ga0495613_0043777_148_1584 453
17 3300047321 Ga0495676_0005919 Ga0495676_0005919_2456_3892 453
18 3300048089 Ga0495614_0000260 Ga0495614_0000260_14827_16263 453
19 3300049572 Ga0501036_0082904 Ga0501036_0082904_586_2010 453
20 3300049581 Ga0501047_0079123 Ga0501047_0079123_821_2245 453
21 3300049822 Ga0501035_0109289 Ga0501035_0109289_946_2370 453
22 3300049823 Ga0501044_0029002 Ga0501044_0029002_3698_5122 453
23 3300042007 Ga0439449_0000106 Ga0439449_0000106_2989_4410 454
24 iso_pu_bacteria 2808606982 2811843118 455
25 iso_pu_bacteria 2862178590 2862180858 455
26 iso_pu_bacteria 2582581313 2585304329 456
27 iso_pu_bacteria 2582581314 2585314960 456
28 iso_pu_bacteria 2616644941 2616905745 456
29 iso_pu_bacteria 2643221548 2643766008 456
30 iso_pu_bacteria 2643221578 2643901465 456
31 iso_pu_bacteria 2643221587 2643945806 456
32 iso_pu_bacteria 2643221647 2644270547 456
33 iso_pu_bacteria 2643221673 2644407609 456
34 iso_pu_bacteria 2643221677 2644432595 456
35 iso_pu_bacteria 2643221714 2644630290 456
36 iso_pu_bacteria 2784132148 2784592086 456
37 iso_pu_bacteria 2784746768 2785373395 456
38 iso_pu_bacteria 2786546132 2786674601 456
39 iso_pu_bacteria 2802429296 2804843429 456
40 iso_pu_bacteria 2808606359 2808845508 456
41 iso_pu_bacteria 2808606375 2808915215 456
42 iso_pu_bacteria 2808606448 2809235770 456
43 iso_pu_bacteria 2811994879 2812354183 456
44 iso_pu_bacteria 2811994917 2812482956 456
45 iso_pu_bacteria 2862281513 2862282894 456
46 iso_pu_bacteria 2862290372 2862291147 456
47 iso_pu_bacteria 2862382967 2862389061 456
48 iso_pu_bacteria 2862507626 2862511865 456
49 iso_pu_bacteria 2862574272 2862575238 456
50 iso_pu_bacteria 2863404153 2863410446 456
51 iso_pu_bacteria 2867428634 2867431619 456
52 iso_pu_bacteria 2873151551 2873152463 456
53 iso_pu_bacteria 2875391855 2875398116 456
54 iso_pu_bacteria 2877676314 2877677523 456
55 iso_pu_bacteria 2912715099 2912715772 456
56 iso_pu_bacteria 2912723979 2912728697 456
57 iso_pu_bacteria 2918501144 2918508003 456
58 iso_pu_bacteria 2919468124 2919472857 456
59 iso_pu_bacteria 2946045630 2946046207 456
60 iso_pu_bacteria 2946072368 2946079324 456
61 iso_pu_bacteria 2947224130 2947225263 456
62 iso_pu_bacteria 2954002825 2954009432 456
63 iso_pu_bacteria 2954380949 2954382254 456
64 iso_pu_bacteria 2954673503 2954680802 456
65 iso_pu_bacteria 2954682443 2954683353 456
66 iso_pu_bacteria 2954691527 2954693081 456
67 iso_pu_bacteria 2954701450 2954708155 456
68 iso_pu_bacteria 2954711539 2954712754 456
69 iso_pu_bacteria 2954721474 2954722713 456
70 iso_pu_bacteria 2954731030 2954739147 456
71 iso_pu_bacteria 2954740390 2954741593 456
72 iso_pu_bacteria 2954749733 2954757976 456
73 iso_pu_bacteria 2954759201 2954760604 456
74 iso_pu_bacteria 2990059506 2990065064 456
75 iso_pu_bacteria 3006393351 3006394256 456
76 iso_pu_bacteria 3006493962 3006494457 456
77 iso_pu_bacteria 8008574985 8008575715 456
78 iso_pu_bacteria 8023623736 8023630205 456
79 iso_pu_bacteria 8025413630 8025418580 456
80 iso_pu_bacteria 8048406513 8048408558 456
81 iso_pu_bacteria 8056829672 8056836325 456
82 3300049568 Ga0501031_0061813 Ga0501031_0061813_60_1457 457
83 3300049569 Ga0501032_0162406 Ga0501032_0162406_33_1430 457
84 3300049570 Ga0501033_0133342 Ga0501033_0133342_345_1742 457
85 3300049572 Ga0501036_0120054 Ga0501036_0120054_78_1475 457
86 3300049573 Ga0501037_0036337 Ga0501037_0036337_59_1456 457
87 3300049574 Ga0501038_0003979 Ga0501038_0003979_12263_13660 457
88 3300049578 Ga0501042_0044755 Ga0501042_0044755_124_1521 457
89 3300049581 Ga0501047_0126079 Ga0501047_0126079_829_2226 457
90 3300049582 Ga0501048_0053058 Ga0501048_0053058_1385_2782 457
91 3300049822 Ga0501035_0050236 Ga0501035_0050236_2308_3705 457
92 3300003316 rootH1_10055768 rootH1_100557683 460
93 3300003320 rootH2_10106679 rootH2_101066793 460
94 3300005563 Ga0068855_100323204 Ga0068855_1003232042 460
95 3300006038 Ga0075365_10046535 Ga0075365_100465353 460
96 3300006178 Ga0075367_10005258 Ga0075367_100052586 460
97 3300014497 Ga0182008_10000552 Ga0182008_1000055212 460
98 3300015262 Ga0182007_10000554 Ga0182007_100005546 460
99 3300015688 Ga0183367_1016 Ga0183367_1016237 460
100 3300025302 Ga0207426_1001003 Ga0207426_10010034 460
101 3300025302 Ga0207426_1003759 Ga0207426_10037594 460
102 3300025302 Ga0207426_1005230 Ga0207426_10052301 460
103 3300025949 Ga0207667_10225498 Ga0207667_102254982 460
104 3300027866 Ga0209813_10008643 Ga0209813_100086432 460
105 3300028786 Ga0307517_10018152 Ga0307517_100181528 460
106 3300028794 Ga0307515_10010304 Ga0307515_1001030412 460
107 3300028794 Ga0307515_10097093 Ga0307515_100970932 460
108 3300030521 Ga0307511_10000672 Ga0307511_1000067232 460
109 3300030521 Ga0307511_10010986 Ga0307511_100109863 460
110 3300030521 Ga0307511_10036432 Ga0307511_100364325 460
111 3300030522 Ga0307512_10000801 Ga0307512_1000080127 460
112 3300030522 Ga0307512_10029584 Ga0307512_100295842 460
113 3300031456 Ga0307513_10010474 Ga0307513_100104746 460
114 3300031507 Ga0307509_10006518 Ga0307509_100065189 460
115 3300031616 Ga0307508_10004718 Ga0307508_100047189 460
116 3300031649 Ga0307514_10084792 Ga0307514_100847922 460
117 3300033180 Ga0307510_10006065 Ga0307510_1000606511 460
118 3300033180 Ga0307510_10133293 Ga0307510_101332932 460
119 3300037418 Ga0395900_0280918 Ga0395900_0280918_77_1504 460
120 3300037466 Ga0395898_0028089 Ga0395898_0028089_2304_3725 460
121 3300037466 Ga0395898_0059475 Ga0395898_0059475_812_2278 460
122 3300037466 Ga0395898_0081402 Ga0395898_0081402_1257_2678 460
123 3300041404 Ga0439436_0004409 Ga0439436_0004409_800_2224 460
124 3300041406 Ga0439439_0002688 Ga0439439_0002688_1167_2588 460
125 3300041512 Ga0451853_2629277 Ga0451853_2629277_7217_8647 460
126 3300042005 Ga0439448_0019575 Ga0439448_0019575_515_1933 460
127 3300042007 Ga0439449_0015320 Ga0439449_0015320_769_2190 460
128 3300042014 Ga0439457_002260 Ga0439457_002260_30_1454 460
129 3300042131 Ga0450894_001011 Ga0450894_001011_1900_3381 460
130 3300042138 Ga0450903_000204 Ga0450903_000204_11603_13021 460
131 3300042145 Ga0450906_002596 Ga0450906_002596_524_2005 460
132 3300042157 Ga0439458_0000476 Ga0439458_0000476_7941_9359 460
133 3300044656 Ga0466969_0009827 Ga0466969_0009827_304_1725 460
134 3300044656 Ga0466969_0042409 Ga0466969_0042409_103_1566 460
135 3300044658 Ga0466972_0000744 Ga0466972_0000744_7901_9325 460
136 3300044658 Ga0466972_0006192 Ga0466972_0006192_1473_2894 460
137 3300044684 Ga0466966_0008564 Ga0466966_0008564_4780_6204 460
138 3300044693 Ga0466961_0001840 Ga0466961_0001840_2487_3908 460
139 3300044693 Ga0466961_0009383 Ga0466961_0009383_3488_4912 460
140 3300044694 Ga0466963_0000926 Ga0466963_0000926_11100_12521 460
141 3300044694 Ga0466963_0040657 Ga0466963_0040657_788_2212 460
142 3300044719 Ga0466971_0009123 Ga0466971_0009123_74_1498 460
143 3300044765 Ga0466970_0000928 Ga0466970_0000928_6598_8019 460
144 3300044765 Ga0466970_0000949 Ga0466970_0000949_4427_5848 460
145 3300045976 Ga0466967_0059566 Ga0466967_0059566_1280_2701 460
146 3300045976 Ga0466967_0124477 Ga0466967_0124477_279_1703 460
147 3300045976 Ga0466967_0238172 Ga0466967_0238172_236_1675 460
148 3300046455 Ga0495603_0002686 Ga0495603_0002686_6696_8123 460
149 3300046459 Ga0495629_0029404 Ga0495629_0029404_1787_3223 460
150 3300046476 Ga0495662_0000534 Ga0495662_0000534_9867_11288 460
151 3300046477 Ga0495664_0006041 Ga0495664_0006041_4678_6099 460
152 3300046499 Ga0495594_0033304 Ga0495594_0033304_298_1725 460
153 3300046516 Ga0495628_0030553 Ga0495628_0030553_1711_3132 460
154 3300046517 Ga0495630_0038431 Ga0495630_0038431_1822_3243 460
155 3300046536 Ga0495587_0003123 Ga0495587_0003123_5835_7256 460
156 3300046543 Ga0495645_0005263 Ga0495645_0005263_6671_8092 460
157 3300046642 Ga0495634_0005064 Ga0495634_0005064_5628_7049 460
158 3300046663 Ga0495635_0006549 Ga0495635_0006549_1288_2709 460
159 3300046675 Ga0495657_0007655 Ga0495657_0007655_3065_4486 460
160 3300046680 Ga0495646_0005341 Ga0495646_0005341_1961_3382 460
161 3300046689 Ga0495613_0006123 Ga0495613_0006123_5628_7049 460
162 3300046691 Ga0495670_0022829 Ga0495670_0022829_962_2392 460
163 3300046794 Ga0495589_0007527 Ga0495589_0007527_1866_3296 460
164 3300047315 Ga0495581_0000712 Ga0495581_0000712_1208_2629 460
165 3300047317 Ga0495604_0003200 Ga0495604_0003200_3655_5076 460
166 3300047321 Ga0495676_0040079 Ga0495676_0040079_1729_3150 460
167 3300047443 Ga0495687_001648 Ga0495687_001648_4082_5509 460
168 3300047444 Ga0495675_0029205 Ga0495675_0029205_869_2290 460
169 3300047447 Ga0495685_013456 Ga0495685_013456_899_2329 460
170 3300047472 Ga0495686_0106144 Ga0495686_0106144_104_1525 460
171 3300047673 Ga0495593_0000888 Ga0495593_0000888_786_2207 460
172 3300048089 Ga0495614_0000841 Ga0495614_0000841_2911_4332 460
173 3300049570 Ga0501033_0015942 Ga0501033_0015942_4177_5598 460
174 3300049572 Ga0501036_0003851 Ga0501036_0003851_4294_5715 460
175 3300049572 Ga0501036_0014468 Ga0501036_0014468_10_1431 460
176 3300049574 Ga0501038_0004886 Ga0501038_0004886_4737_6158 460
177 3300049574 Ga0501038_0042835 Ga0501038_0042835_2223_3644 460
178 3300049579 Ga0501043_0001841 Ga0501043_0001841_10_1431 460
179 3300049586 Ga0501070_0001946 Ga0501070_0001946_66_1487 460
180 3300049822 Ga0501035_0011752 Ga0501035_0011752_6600_8021 460
181 3300049822 Ga0501035_0015570 Ga0501035_0015570_5262_6683 460
182 3300049822 Ga0501035_0053191 Ga0501035_0053191_2119_3543 460
183 3300049822 Ga0501035_0153827 Ga0501035_0153827_55_1476 460
184 3300049823 Ga0501044_0008772 Ga0501044_0008772_2068_3552 460
185 3300049823 Ga0501044_0013052 Ga0501044_0013052_36_1460 460
186 3300049823 Ga0501044_0220746 Ga0501044_0220746_344_1765 460
187 3300050494 nmdc:mga06z11_3522_c1 nmdc:mga06z11_3522_c1_3351_4832 460
188 3300050495 nmdc:mga04h51_2391_c1 nmdc:mga04h51_2391_c1_2574_4055 460
189 3300053095 Ga0500640_032138 Ga0500640_032138_862_2283 460
190 iso_pu_bacteria 2643221678 2644440774 460
191 iso_pu_bacteria 2946064051 2946071515 460
192 iso_pu_bacteria 8008558824 8008564360 460

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06762

LMF1

Lipase maturation factor

141

294

0.98

PF06762

LMF1

Lipase maturation factor

294

482

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
8snh-assembly1.cif.gz_E cytochrome bc1-cbb3 supercomplex from pseudomonas aeruginosa 0.287 9 256
5are-assembly1.cif.gz_W bovine mitochondrial atp synthase state 1b 0.2602 102 266
7ajf-assembly1.cif.gz_a bovine atp synthase dimer state2:state2 0.2555 117 268
6k7p-assembly1.cif.gz_A-2 crystal structure of human aff4-thd domain 0.2446 66 266
6zkv-assembly1.cif.gz_M deactive complex i, open4 0.2356 24 301
ID Description Score Start End Superfamily
af_Q2FUV7_1_119_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.6194 149 266 1.10.10.1740
af_Q53FP2_11_127_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.6118 154 262 1.20.120.550
af_Q8NCS4_7_125_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.6059 154 262 1.20.120.550
af_Q53FP2_11_127_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.5751 154 262 1.20.120.550
af_Q2FUV7_1_119_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.5735 149 266 1.10.10.1740
ID Description Score Start End GO Terms
AF-A0A655AAW6-F1-model_v4 Transmembrane protein 0.9481 333 459 GO:0016020
GO:0051604
AF-A0A536P6U0-F1-model_v4 Lipase maturation factor family protein 0.9417 1 173 GO:0016020
GO:0051604
AF-X8ADJ6-F1-model_v4 deleted 0.9277 1 267
AF-A0A536P6U0-F1-model_v4 Lipase maturation factor family protein 0.9262 1 173 GO:0016020
GO:0051604
AF-A0A6B1KX58-F1-model_v4 deleted 0.9219 1 251

Feature Viewer

pLDDT pTM Quality
80.33 0.83 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map