F295668

General Info

Members Datasets Scaffolds Average Seq Length
192 143 384 429

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10104267|Ga0157375_101042672
Length 490
Sequence VARRQQTRISAMIHGDQGEFPHLMRDDISTYRASAPSATRPGWQDAVRFGYMSLIRASERIAACCNRDRLHLAPRVAALLFVLGLAACGGTDSRTTIRFWTIGREGEVVAQLLPAFERAHPGVRIEIQQIPLTASHEKLLTAFAGDALPDICQLGNTWIPEFAALGALEPLQPFVDASTVVRSDDYFPGIWDTNVIDGRLYGVPWYVDTRLLFYRTDLLAKAGFDHAPRDWDEWRRAMAAVKTQGGAEKYSIFLPLNEFEPLLGLALQQPDPLLRDNGTRGNFESAGFRRALAFYVEMFRSDWAPPMSNMQISNVWDEFARGFFAFYITGPWNIGEFKRRVPQIAGQWSTAPLPGFEGQGGGAAGGSSFAIFRSSAHKQVAWELAEFLSAVEQQQKFYELTGDLPPRRSVWNYPALAGDVYSKAFHEQLEHVTPSPKVPEWERIAQEMRLMAERVIRGGVPIDTALKDFDAKTDEILAKRRALLADRSKP

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
97 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
98 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
102 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
103 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
104 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
105 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
106 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
107 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
128 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
143 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.96
Metatranscriptomes 0
Isolates 1.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.04
Nodule 0
Rhizoplane 3.12
Rhizosphere 93.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10104267 3300013308 Bacteria 2924
2 JGI24738J21930_10000004 3300002075 Bacteria 45087
3 Ga0070690_100058214 3300005330 Bacteria 2481
4 Ga0070670_100029887 3300005331 Bacteria 4693
5 Ga0070661_100080657 3300005344 Bacteria 2402
6 Ga0070669_100036234 3300005353 Bacteria 3574
7 Ga0070675_100000024 3300005354 Bacteria 117191
8 Ga0070675_100042592 3300005354 Bacteria 3710
9 Ga0070659_100077046 3300005366 Bacteria 2659
10 Ga0070667_100000044 3300005367 Bacteria 166321
11 Ga0070667_100035392 3300005367 Bacteria 4182
12 Ga0070667_100142702 3300005367 Bacteria 2099
13 Ga0070667_100179864 3300005367 Bacteria 1870
14 Ga0070710_10086773 3300005437 Bacteria 1838
15 Ga0070701_10023813 3300005438 Bacteria 2954
16 Ga0070711_100000029 3300005439 Bacteria 101028
17 Ga0070705_100061533 3300005440 Bacteria 2231
18 Ga0070700_100000002 3300005441 Bacteria 261904
19 Ga0070708_100136040 3300005445 Bacteria 2276
20 Ga0070663_100052434 3300005455 Bacteria 2909
21 Ga0070678_100098813 3300005456 Bacteria 2257
22 Ga0070707_100003023 3300005468 Bacteria 15953
23 Ga0070698_100003123 3300005471 Bacteria 18254
24 Ga0070698_100075334 3300005471 Bacteria 3378
25 Ga0070699_100001088 3300005518 Bacteria 25321
26 Ga0070699_100003232 3300005518 Bacteria 14407
27 Ga0070679_100131077 3300005530 Bacteria 2488
28 Ga0068853_100000701 3300005539 Bacteria 23195
29 Ga0068853_100001138 3300005539 Bacteria 18828
30 Ga0068853_100008250 3300005539 Bacteria 8361
31 Ga0070696_100070553 3300005546 Bacteria 2458
32 Ga0070693_100053216 3300005547 Bacteria 2323
33 Ga0070665_100000095 3300005548 Bacteria 170459
34 Ga0070665_100039787 3300005548 Bacteria 4726
35 Ga0070704_100000795 3300005549 Bacteria 15597
36 Ga0068855_100009396 3300005563 Bacteria 11809
37 Ga0068855_100252788 3300005563 Bacteria 1965
38 Ga0068855_100338802 3300005563 Bacteria 1659
39 Ga0068857_100029726 3300005577 Bacteria 4822
40 Ga0068857_100159198 3300005577 Bacteria 2048
41 Ga0068856_100194773 3300005614 Bacteria 2040
42 Ga0068852_100190219 3300005616 Bacteria 1936
43 Ga0068852_100238866 3300005616 Bacteria 1735
44 Ga0068859_100000295 3300005617 Bacteria 49698
45 Ga0068859_100046163 3300005617 Bacteria 4376
46 Ga0068861_100020809 3300005719 Bacteria 4705
47 Ga0068870_10048019 3300005840 Bacteria 2246
48 Ga0068863_100024656 3300005841 Bacteria 5735
49 Ga0068860_100296662 3300005843 Bacteria 1583
50 Ga0068862_100000507 3300005844 Bacteria 41412
51 Ga0068862_100001489 3300005844 Bacteria 21477
52 Ga0070717_10267652 3300006028 Bacteria 1513
53 Ga0097621_100090519 3300006237 Bacteria 2560
54 Ga0068871_100118574 3300006358 Bacteria 2233
55 Ga0075428_100022620 3300006844 Bacteria 6960
56 Ga0075428_100184954 3300006844 Bacteria 2255
57 Ga0075430_100000460 3300006846 Bacteria 30410
58 Ga0075431_100018446 3300006847 Bacteria 7105
59 Ga0075429_100002277 3300006880 Bacteria 16101
60 Ga0075436_100004424 3300006914 Bacteria 9647
61 Ga0097620_100000295 3300006931 Bacteria 49698
62 Ga0097620_100046163 3300006931 Bacteria 4376
63 Ga0075435_100000287 3300007076 Bacteria 31316
64 Ga0105245_10000284 3300009098 Bacteria 48293
65 Ga0105245_10079478 3300009098 Bacteria 2994
66 Ga0114129_10011349 3300009147 Bacteria 12690
67 Ga0114129_10627013 3300009147 Bacteria 1390
68 Ga0105241_10018584 3300009174 Bacteria 5115
69 Ga0105241_10022209 3300009174 Bacteria 4698
70 Ga0105248_10185816 3300009177 Bacteria 2342
71 Ga0105237_10022347 3300009545 Bacteria 6492
72 Ga0105238_10017800 3300009551 Bacteria 7223
73 Ga0105239_10002094 3300010375 Bacteria 25848
74 Ga0105239_10013302 3300010375 Bacteria 9144
75 Ga0105239_10058139 3300010375 Bacteria 4243
76 Ga0105239_10086152 3300010375 Bacteria 3462
77 Ga0157369_10000835 3300013105 Bacteria 39366
78 Ga0157374_10009244 3300013296 Bacteria 8452
79 Ga0157372_10051864 3300013307 Bacteria 4566
80 Ga0163163_10000041 3300014325 Bacteria 142066
81 Ga0163163_10007296 3300014325 Bacteria 9750
82 Ga0163163_10081796 3300014325 Bacteria 3232
83 Ga0163163_10100346 3300014325 Bacteria 2917
84 Ga0157379_10304840 3300014968 Bacteria 1452
85 Ga0157376_10015709 3300014969 Bacteria 5727
86 Ga0157376_10036817 3300014969 Bacteria 3966
87 Ga0209051_1006196 3300025303 Bacteria 6781
88 Ga0207656_10025375 3300025321 Bacteria 2405
89 Ga0207647_10000564 3300025904 Bacteria 28987
90 Ga0207699_10010710 3300025906 Bacteria 4611
91 Ga0207643_10011213 3300025908 Bacteria 4840
92 Ga0207643_10033144 3300025908 Bacteria 2890
93 Ga0207695_10003412 3300025913 Bacteria 22427
94 Ga0207671_10002619 3300025914 Bacteria 18987
95 Ga0207671_10008708 3300025914 Bacteria 8563
96 Ga0207663_10000050 3300025916 Bacteria 63105
97 Ga0207657_10122020 3300025919 Bacteria 2143
98 Ga0207694_10001916 3300025924 Bacteria 17250
99 Ga0207659_10000029 3300025926 Bacteria 129487
100 Ga0207687_10000927 3300025927 Bacteria 19983
101 Ga0207689_10034161 3300025942 Bacteria 4223
102 Ga0207689_10078367 3300025942 Bacteria 2716
103 Ga0207667_10157003 3300025949 Bacteria 2340
104 Ga0207712_10091359 3300025961 Bacteria 2242
105 Ga0207668_10164089 3300025972 Bacteria 1734
106 Ga0207658_10025288 3300025986 Bacteria 4157
107 Ga0207658_10038624 3300025986 Bacteria 3441
108 Ga0207658_10174398 3300025986 Bacteria 1775
109 Ga0207639_10005566 3300026041 Bacteria 8519
110 Ga0207639_10026981 3300026041 Bacteria 4178
111 Ga0207678_10098261 3300026067 Bacteria 2501
112 Ga0207708_10000137 3300026075 Bacteria 57745
113 Ga0207702_10168190 3300026078 Bacteria 2008
114 Ga0207641_10054711 3300026088 Bacteria 3387
115 Ga0207641_10084740 3300026088 Bacteria 2760
116 Ga0207641_10173213 3300026088 Bacteria 1972
117 Ga0207648_10052320 3300026089 Bacteria 3571
118 Ga0207648_10061219 3300026089 Bacteria 3282
119 Ga0207648_10088263 3300026089 Bacteria 2708
120 Ga0207676_10049766 3300026095 Bacteria 3263
121 Ga0207674_10007980 3300026116 Bacteria 12284
122 Ga0207674_10016509 3300026116 Bacteria 8079
123 Ga0207674_10028757 3300026116 Bacteria 5862
124 Ga0207675_100034550 3300026118 Bacteria 4714
125 Ga0207683_10049421 3300026121 Bacteria 3682
126 Ga0207683_10097805 3300026121 Bacteria 2618
127 Ga0268266_10000001 3300028379 Bacteria 4040580
128 Ga0268266_10089637 3300028379 Bacteria 2694
129 Ga0268265_10000140 3300028380 Bacteria 91626
130 Ga0265331_10011494 3300031250 Bacteria 4845
131 Ga0265327_10008136 3300031251 Bacteria 7892
132 Ga0307416_100193526 3300032002 Bacteria 1921
133 Ga0307411_10014006 3300032005 Bacteria 4449
134 Ga0373944_0040930 3300035089 Bacteria 1432
135 Ga0373933_0118843 3300035724 Bacteria 1654
136 Ga0373937_0009817 3300036401 Bacteria 8346
137 Ga0451793_0494313 3300041452 Bacteria 2792
138 Ga0451807_1331705 3300041486 Bacteria 2541
139 Ga0466982_0000031 3300044672 Bacteria 48664
140 Ga0451576_0242310 3300045051 Bacteria 1884
141 Ga0495638_0034593 3300046460 Bacteria 3225
142 Ga0495651_0110639 3300046462 Bacteria 2032
143 Ga0495650_0003511 3300046471 Bacteria 11369
144 Ga0495580_0083221 3300046472 Bacteria 2230
145 Ga0495582_0002037 3300046473 Bacteria 11321
146 Ga0495665_0047409 3300046531 Bacteria 2279
147 Ga0495621_0005575 3300046539 Bacteria 3627
148 Ga0495649_0141528 3300046694 Bacteria 1266
149 Ga0496101_0106035 3300048904 Bacteria 2110
150 Ga0496104_0000005 3300048907 Bacteria 620360
151 Ga0496105_0000016 3300048908 Bacteria 212909
152 Ga0496115_0000077 3300048918 Bacteria 89885
153 Ga0496118_0054544 3300048921 Bacteria 3026
154 Ga0496126_0000047 3300048929 Bacteria 322212
155 Ga0501031_0167495 3300049568 Bacteria 1436
156 Ga0501032_0003847 3300049569 Bacteria 11400
157 Ga0501033_0000784 3300049570 Bacteria 29162
158 Ga0501033_0024176 3300049570 Bacteria 4583
159 Ga0501034_0002409 3300049571 Bacteria 22644
160 Ga0501034_0020315 3300049571 Bacteria 6781
161 Ga0501034_0080218 3300049571 Bacteria 3267
162 Ga0501036_0058298 3300049572 Bacteria 3271
163 Ga0501036_0128623 3300049572 Bacteria 2138
164 Ga0501037_0000913 3300049573 Bacteria 22000
165 Ga0501038_0000102 3300049574 Bacteria 72409
166 Ga0501039_0190104 3300049575 Bacteria 1614
167 Ga0501040_0061007 3300049576 Bacteria 2593
168 Ga0501042_0175470 3300049578 Bacteria 1546
169 Ga0501046_0001819 3300049580 Bacteria 20318
170 Ga0501047_0010290 3300049581 Bacteria 8846
171 Ga0501048_0033737 3300049582 Bacteria 3696
172 Ga0501048_0083731 3300049582 Bacteria 2249
173 Ga0501068_0069672 3300049584 Bacteria 2145
174 Ga0501069_0007003 3300049585 Bacteria 5901
175 Ga0501072_0051734 3300049588 Bacteria 3234
176 Ga0501073_0001706 3300049589 Bacteria 16294
177 Ga0501081_0110097 3300049743 Bacteria 1954
178 Ga0501083_0051107 3300049744 Bacteria 2780
179 Ga0501035_0002549 3300049822 Bacteria 17819
180 Ga0501035_0143697 3300049822 Bacteria 2073
181 Ga0501045_0011208 3300049824 Bacteria 6288
182 nmdc:mga05p37_485984_c1 3300050507 Bacteria 1421
183 nmdc:mga05p37_8091_c1 3300050507 Bacteria 12427
184 nmdc:mga09592_1957_c1 3300050508 Bacteria 16597
185 nmdc:mga0qj67_15466_c1 3300050509 Bacteria 5777
186 nmdc:mga0qj67_95212_c1 3300050509 Bacteria 2396
187 nmdc:mga08x19_45719_c1 3300050514 Bacteria 2798
188 Ga0500651_0013490 3300053093 Bacteria 4981
189 Ga0501084_0030902 3300054114 Bacteria 4478
190 Ga0501082_0001112 3300060353 Bacteria 23764
191 2819564530 2818991440 Bacteria 4774720
192 2904465174 2904463128 Bacteria 4775606
193 Ga0157375_10104267
194 JGI24738J21930_10000004
195 Ga0070690_100058214
196 Ga0070670_100029887
197 Ga0070661_100080657
198 Ga0070669_100036234
199 Ga0070675_100000024
200 Ga0070675_100042592
201 Ga0070659_100077046
202 Ga0070667_100000044
203 Ga0070667_100035392
204 Ga0070667_100142702
205 Ga0070667_100179864
206 Ga0070710_10086773
207 Ga0070701_10023813
208 Ga0070711_100000029
209 Ga0070705_100061533
210 Ga0070700_100000002
211 Ga0070708_100136040
212 Ga0070663_100052434
213 Ga0070678_100098813
214 Ga0070707_100003023
215 Ga0070698_100003123
216 Ga0070698_100075334
217 Ga0070699_100001088
218 Ga0070699_100003232
219 Ga0070679_100131077
220 Ga0068853_100000701
221 Ga0068853_100001138
222 Ga0068853_100008250
223 Ga0070696_100070553
224 Ga0070693_100053216
225 Ga0070665_100000095
226 Ga0070665_100039787
227 Ga0070704_100000795
228 Ga0068855_100009396
229 Ga0068855_100252788
230 Ga0068855_100338802
231 Ga0068857_100029726
232 Ga0068857_100159198
233 Ga0068856_100194773
234 Ga0068852_100190219
235 Ga0068852_100238866
236 Ga0068859_100000295
237 Ga0068859_100046163
238 Ga0068861_100020809
239 Ga0068870_10048019
240 Ga0068863_100024656
241 Ga0068860_100296662
242 Ga0068862_100000507
243 Ga0068862_100001489
244 Ga0070717_10267652
245 Ga0097621_100090519
246 Ga0068871_100118574
247 Ga0075428_100022620
248 Ga0075428_100184954
249 Ga0075430_100000460
250 Ga0075431_100018446
251 Ga0075429_100002277
252 Ga0075436_100004424
253 Ga0097620_100000295
254 Ga0097620_100046163
255 Ga0075435_100000287
256 Ga0105245_10000284
257 Ga0105245_10079478
258 Ga0114129_10011349
259 Ga0114129_10627013
260 Ga0105241_10018584
261 Ga0105241_10022209
262 Ga0105248_10185816
263 Ga0105237_10022347
264 Ga0105238_10017800
265 Ga0105239_10002094
266 Ga0105239_10013302
267 Ga0105239_10058139
268 Ga0105239_10086152
269 Ga0157369_10000835
270 Ga0157374_10009244
271 Ga0157372_10051864
272 Ga0163163_10000041
273 Ga0163163_10007296
274 Ga0163163_10081796
275 Ga0163163_10100346
276 Ga0157379_10304840
277 Ga0157376_10015709
278 Ga0157376_10036817
279 Ga0209051_1006196
280 Ga0207656_10025375
281 Ga0207647_10000564
282 Ga0207699_10010710
283 Ga0207643_10011213
284 Ga0207643_10033144
285 Ga0207695_10003412
286 Ga0207671_10002619
287 Ga0207671_10008708
288 Ga0207663_10000050
289 Ga0207657_10122020
290 Ga0207694_10001916
291 Ga0207659_10000029
292 Ga0207687_10000927
293 Ga0207689_10034161
294 Ga0207689_10078367
295 Ga0207667_10157003
296 Ga0207712_10091359
297 Ga0207668_10164089
298 Ga0207658_10025288
299 Ga0207658_10038624
300 Ga0207658_10174398
301 Ga0207639_10005566
302 Ga0207639_10026981
303 Ga0207678_10098261
304 Ga0207708_10000137
305 Ga0207702_10168190
306 Ga0207641_10054711
307 Ga0207641_10084740
308 Ga0207641_10173213
309 Ga0207648_10052320
310 Ga0207648_10061219
311 Ga0207648_10088263
312 Ga0207676_10049766
313 Ga0207674_10007980
314 Ga0207674_10016509
315 Ga0207674_10028757
316 Ga0207675_100034550
317 Ga0207683_10049421
318 Ga0207683_10097805
319 Ga0268266_10000001
320 Ga0268266_10089637
321 Ga0268265_10000140
322 Ga0265331_10011494
323 Ga0265327_10008136
324 Ga0307416_100193526
325 Ga0307411_10014006
326 Ga0373944_0040930
327 Ga0373933_0118843
328 Ga0373937_0009817
329 Ga0451793_0494313
330 Ga0451807_1331705
331 Ga0466982_0000031
332 Ga0451576_0242310
333 Ga0495638_0034593
334 Ga0495651_0110639
335 Ga0495650_0003511
336 Ga0495580_0083221
337 Ga0495582_0002037
338 Ga0495665_0047409
339 Ga0495621_0005575
340 Ga0495649_0141528
341 Ga0496101_0106035
342 Ga0496104_0000005
343 Ga0496105_0000016
344 Ga0496115_0000077
345 Ga0496118_0054544
346 Ga0496126_0000047
347 Ga0501031_0167495
348 Ga0501032_0003847
349 Ga0501033_0000784
350 Ga0501033_0024176
351 Ga0501034_0002409
352 Ga0501034_0020315
353 Ga0501034_0080218
354 Ga0501036_0058298
355 Ga0501036_0128623
356 Ga0501037_0000913
357 Ga0501038_0000102
358 Ga0501039_0190104
359 Ga0501040_0061007
360 Ga0501042_0175470
361 Ga0501046_0001819
362 Ga0501047_0010290
363 Ga0501048_0033737
364 Ga0501048_0083731
365 Ga0501068_0069672
366 Ga0501069_0007003
367 Ga0501072_0051734
368 Ga0501073_0001706
369 Ga0501081_0110097
370 Ga0501083_0051107
371 Ga0501035_0002549
372 Ga0501035_0143697
373 Ga0501045_0011208
374 nmdc:mga05p37_485984_c1
375 nmdc:mga05p37_8091_c1
376 nmdc:mga09592_1957_c1
377 nmdc:mga0qj67_15466_c1
378 nmdc:mga0qj67_95212_c1
379 nmdc:mga08x19_45719_c1
380 Ga0500651_0013490
381 Ga0501084_0030902
382 Ga0501082_0001112
383 2819564530
384 2904465174

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

101

395

0.93

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

111

423

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3uor-assembly2.cif.gz_B the structure of the sugar-binding protein male from the phytopathogen xanthomonas citri 0.9752 34 423
3uor-assembly2.cif.gz_B the structure of the sugar-binding protein male from the phytopathogen xanthomonas citri 0.9606 34 423
5yse-assembly1.cif.gz_A crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with sophorotetraose 0.9139 33 426
5yse-assembly1.cif.gz_A crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with sophorotetraose 0.9072 33 426
7c71-assembly2.cif.gz_B crystal structure of beta-glycosides-binding protein (e117a) of abc transporter in an open state 0.8795 33 417
ID Description Score Start End Superfamily
3uorB02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.969 149 423 3.40.190.10
3uorB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9684 34 374 3.40.190.10
3uorB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9584 34 374 3.40.190.10
3uorB02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9459 149 423 3.40.190.10
5ysdB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9264 33 374 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A8B0U4D7-F1-model_v4 deleted 0.9784 26 424
AF-A0A4S0QZA5-F1-model_v4 deleted 0.972 16 424
AF-A0A2M7XSQ7-F1-model_v4 ABC transporter substrate-binding protein 0.9678 27 424 GO:0015768
GO:0042956
GO:0055052
GO:1901982
AF-A0A3D8VEB8-F1-model_v4 Extracellular solute-binding protein 0.9654 41 416 GO:0015768
GO:0030313
GO:0042956
GO:0055052
GO:1901982
AF-A0A7C2NDG7-F1-model_v4 Extracellular solute-binding protein 0.9646 25 425

Map