F296967
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 193 | 172 | 386 | 690 |
Family's Representative Sequence
| Representative Sequence | 3300006028|Ga0070717_10004890|Ga0070717_100048905 |
| Length | 724 |
| Sequence | VSQLLEDERIAPAAAAGPGQPQKKMSQTVTATRKGRTFPLERTRNIGIMAHIDAGKTTTTERILFYTGRIHRMGEVHEGAATMDWMVQEQERGITITSAATACEWRKHRINIIDTPGHVDFTVEVERSLRVLDGAVAVFDAVSGVEPQSETVWRQADRYDVPRIAFINKMDRMGADFFGSLESIKQKLGANAVAIQLPIGREAGFNGIVDLIKQEAYIYTDDLGTTLEEHDVPEELHAQVEEYRHKMIEAAADYDDELMHAYLEETEISEELIMRALRKGTVMTQLVPVICGAALRNRGVQPMLDAVVDYLPSPLEKPAIEGLNPKTEKVETRAVKDDEPFTALAFKVATDPFVGKLTFFRVYSGTLQSGSYVYNATRGHKERIGRLLQMHANHREEIETVYAGDIAAAIGLKQTTTGDTLTAENQPIVLESMTFPEPVIAVAIEPKTKVDQEKMGTALQRLSEEDPTFRVHTDEETGQTIMEGMGELHLEVLVDRMLREFSVDANVGKPQVSYRETIRRPAKGTGRFVRQSGGRGQYGHAEIEIEPQEPGKGFEFEDKIVGGKIPREYIPAVEKGIREALENGILAGFPMVDVKASLYDGSYHDVDSSEMAFTVAGSMAVKDAVHKADPTLLEPIMKVEVNMPEEFMGDVMGDLTSRRGHILGMEGKGKSQVVKAHVPLANMFGYATELRSMTQGRASYAMEFDHYQEVPKSIGEEIVQKARS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 3 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 4 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 5 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 6 | 3300003856 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz | Metagenome | Rhizosphere |
| 7 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 8 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 15 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 20 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 21 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 22 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 27 | 3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) | Metatranscriptome | Rhizosphere |
| 28 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 29 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 30 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 31 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 32 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 33 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 34 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 36 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 51 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 52 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 53 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 54 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 55 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 56 | 3300033524 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 57 | 3300033527 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 58 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 59 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 60 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 61 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 62 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 63 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 64 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 65 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 66 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 67 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 68 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 69 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 70 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 71 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 72 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 73 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 74 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 75 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 76 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 77 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 78 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 110 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 111 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 112 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 113 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049671 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought | Metagenome | Rhizosphere |
| 125 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 131 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 137 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300060346 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 139 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 140 | 2508501114 | Microvirga lotononidis WSM3557 | Isolate | Nodule |
| 141 | 2510917027 | Brevibacillus sp. CF112 | Isolate | Rhizosphere |
| 142 | 2547132130 | Stenotrophomonas maltophilia RR-10 | Isolate | Unclassified |
| 143 | 2747842428 | Stenotrophomonas sp. WCS2014-113 | Isolate | Unclassified |
| 144 | 2765235840 | Stenotrophomonas maltophilia AA1 | Isolate | Unclassified |
| 145 | 2816332141 | Stenotrophomonas muris 1190 (v2) (version 2) | Isolate | Unclassified |
| 146 | 2842391507 | Stenotrophomonas maltophilia SEMIA 4027 | Isolate | Nodule |
| 147 | 2842757796 | Stenotrophomonas sp. R-72406 | Isolate | Unclassified |
| 148 | 2852649853 | Stenotrophomonas sp. JAI102 | Isolate | Rhizosphere |
| 149 | 2857442823 | Stenotrophomonas sp. R-74235 | Isolate | Unclassified |
| 150 | 2857465823 | Brevibacillus sp. R-74266 | Isolate | Unclassified |
| 151 | 2857591370 | Brevibacillus sp. R-71934 | Isolate | Unclassified |
| 152 | 2874220319 | Stenotrophomonas maltophilia PS5 | Isolate | Unclassified |
| 153 | 2884298095 | Microvirga thermotolerans HR1 | Isolate | Rhizosphere |
| 154 | 2909042592 | Labrys sp. LIt4 | Isolate | Nodule |
| 155 | 2915597211 | Brevibacillus brevis Ag35 | Isolate | Nodule |
| 156 | 2919089067 | Stenotrophomonas sp. 1337 | Isolate | Rhizosphere |
| 157 | 2919134579 | Stenotrophomonas geniculata 1733 | Isolate | Rhizosphere |
| 158 | 2928496128 | Stenotrophomonas indicatrix 1163 | Isolate | Unclassified |
| 159 | 2929183550 | Brevibacillus sp. R-71971 Hybrid assembly | Isolate | Unclassified |
| 160 | 2931380184 | Stenotrophomonas sp. DR822 | Isolate | Rhizosphere |
| 161 | 2937610967 | Stenotrophomonas maltophilia EP20 | Isolate | Unclassified |
| 162 | 2939589442 | Stenotrophomonas rhizophila 716 | Isolate | Rhizosphere |
| 163 | 2939622612 | Stenotrophomonas sp. 2619 | Isolate | Rhizosphere |
| 164 | 2939626828 | Stenotrophomonas sp. 2694 | Isolate | Rhizosphere |
| 165 | 2941475908 | Stenotrophomonas rhizophila 2680 | Isolate | Rhizosphere |
| 166 | 2961047084 | Stenotrophomonas maltophilia EP5 | Isolate | Unclassified |
| 167 | 2961064222 | Stenotrophomonas maltophilia EP13 | Isolate | Unclassified |
| 168 | 2974307012 | Stenotrophomonas sp. SORGH_AS_0282 | Isolate | Unclassified |
| 169 | 2977247770 | Stenotrophomonas rhizophila SORGH_AS 457 | Isolate | Unclassified |
| 170 | 2984514374 | Stenotrophomonas sp. SORGH_AS282 | Isolate | Aerial Root |
| 171 | 2987605356 | Stenotrophomonas sp. ATCM1_4 | Isolate | Unclassified |
| 172 | 8002869464 | Pseudoxanthomonas helianthi 110414 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 79.79 |
| Metatranscriptomes | 3.11 |
| Isolates | 17.1 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.52 |
| Bulb | 0 |
| Endosphere | 8.29 |
| Nodule | 2.07 |
| Rhizoplane | 0.52 |
| Rhizosphere | 73.58 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070717_10004890 | 3300006028 | Bacteria | 9749 |
| 2 | Ga0055526_1002386 | 3300003771 | Bacteria | 12724 |
| 3 | Ga0055537_1005177 | 3300003773 | Bacteria | 3549 |
| 4 | Ga0055534_1002309 | 3300003784 | Bacteria | 6693 |
| 5 | Ga0055528_1001897 | 3300003790 | Bacteria | 11889 |
| 6 | Ga0058692_1001834 | 3300003856 | Bacteria | 7470 |
| 7 | Ga0065704_10082010 | 3300005289 | Bacteria | 3669 |
| 8 | Ga0070668_100019774 | 3300005347 | Bacteria | 5071 |
| 9 | Ga0070667_100003760 | 3300005367 | Bacteria | 12892 |
| 10 | Ga0070709_10001097 | 3300005434 | Bacteria | 14943 |
| 11 | Ga0070714_100000001 | 3300005435 | Bacteria | 469087 |
| 12 | Ga0070713_100016621 | 3300005436 | Bacteria | 5535 |
| 13 | Ga0070681_10053425 | 3300005458 | Bacteria | 4026 |
| 14 | Ga0068867_100057526 | 3300005459 | Bacteria | 2880 |
| 15 | Ga0070706_100002127 | 3300005467 | Bacteria | 20182 |
| 16 | Ga0070679_100009818 | 3300005530 | Bacteria | 9055 |
| 17 | Ga0070697_100007185 | 3300005536 | Bacteria | 8657 |
| 18 | Ga0070696_100029524 | 3300005546 | Bacteria | 3748 |
| 19 | Ga0068860_100089580 | 3300005843 | Bacteria | 2929 |
| 20 | Ga0075364_10007336 | 3300006051 | Bacteria | 6544 |
| 21 | Ga0068865_100002340 | 3300006881 | Bacteria | 11178 |
| 22 | Ga0105251_10018088 | 3300009011 | Bacteria | 3758 |
| 23 | Ga0105240_10038758 | 3300009093 | Bacteria | 6110 |
| 24 | Ga0105243_10031500 | 3300009148 | Bacteria | 4089 |
| 25 | Ga0105239_10040234 | 3300010375 | Bacteria | 5122 |
| 26 | Ga0197907_10252772 | 3300020069 | Bacteria | 3893 |
| 27 | Ga0206355_1126656 | 3300020076 | Bacteria | 7571 |
| 28 | Ga0213875_10007976 | 3300021388 | Bacteria | 5443 |
| 29 | Ga0224712_10012094 | 3300022467 | Bacteria | 2702 |
| 30 | Ga0209147_100210 | 3300025229 | Bacteria | 62804 |
| 31 | Ga0209565_1000870 | 3300025263 | Bacteria | 16660 |
| 32 | Ga0209673_1000204 | 3300025273 | Bacteria | 119618 |
| 33 | Ga0209675_1000015 | 3300025291 | Bacteria | 403517 |
| 34 | Ga0209676_1001936 | 3300025292 | Bacteria | 16690 |
| 35 | Ga0209564_1000037 | 3300025295 | Bacteria | 414794 |
| 36 | Ga0209050_1018200 | 3300025298 | Bacteria | 2743 |
| 37 | Ga0209050_1018206 | 3300025298 | Bacteria | 2742 |
| 38 | Ga0209051_1007058 | 3300025303 | Bacteria | 6212 |
| 39 | Ga0209257_1002823 | 3300025304 | Bacteria | 16317 |
| 40 | Ga0207713_1013338 | 3300025735 | Bacteria | 4337 |
| 41 | Ga0207699_10000308 | 3300025906 | Bacteria | 26108 |
| 42 | Ga0207707_10035774 | 3300025912 | Bacteria | 4343 |
| 43 | Ga0207652_10011932 | 3300025921 | Bacteria | 7012 |
| 44 | Ga0207646_10041541 | 3300025922 | Bacteria | 4134 |
| 45 | Ga0207700_10011910 | 3300025928 | Bacteria | 5575 |
| 46 | Ga0207664_10000007 | 3300025929 | Bacteria | 374590 |
| 47 | Ga0207709_10000421 | 3300025935 | Bacteria | 41092 |
| 48 | Ga0207704_10001284 | 3300025938 | Bacteria | 11229 |
| 49 | Ga0207658_10001452 | 3300025986 | Bacteria | 18479 |
| 50 | Ga0209371_1001408 | 3300027312 | Bacteria | 16504 |
| 51 | Ga0268256_1001205 | 3300030500 | Bacteria | 16504 |
| 52 | Ga0265316_10008283 | 3300031344 | Bacteria | 9662 |
| 53 | Ga0307408_100033362 | 3300031548 | Bacteria | 3597 |
| 54 | Ga0316575_10006392 | 3300031665 | Bacteria | 4234 |
| 55 | Ga0316577_10007070 | 3300031733 | Bacteria | 5972 |
| 56 | Ga0316577_10008118 | 3300031733 | Bacteria | 5612 |
| 57 | Ga0316583_10003802 | 3300032133 | Bacteria | 5352 |
| 58 | Ga0316592_1000955 | 3300033524 | Bacteria | 4438 |
| 59 | Ga0316586_1000385 | 3300033527 | Bacteria | 4187 |
| 60 | Ga0373923_0011289 | 3300035111 | Bacteria | 3272 |
| 61 | Ga0373936_0000707 | 3300035113 | Bacteria | 11678 |
| 62 | Ga0373946_0001178 | 3300035171 | Bacteria | 9058 |
| 63 | Ga0373955_0000382 | 3300035172 | Bacteria | 18735 |
| 64 | Ga0373924_0004412 | 3300035410 | Bacteria | 4912 |
| 65 | Ga0373935_0004577 | 3300035692 | Bacteria | 8133 |
| 66 | Ga0373927_0006962 | 3300035695 | Bacteria | 7676 |
| 67 | Ga0373937_0001476 | 3300036401 | Bacteria | 19707 |
| 68 | Ga0316582_0014885 | 3300036647 | Bacteria | 4430 |
| 69 | Ga0316584_0096402 | 3300036712 | Bacteria | 2214 |
| 70 | Ga0373925_0000435 | 3300037068 | Bacteria | 42178 |
| 71 | Ga0436364_0103207 | 3300037853 | Bacteria | 3406 |
| 72 | Ga0436364_0841780 | 3300037853 | Bacteria | 3640 |
| 73 | Ga0237819_02030 | 3300038705 | Bacteria | 4470 |
| 74 | Ga0400489_56651 | 3300039093 | Bacteria | 22335 |
| 75 | Ga0436365_1136540 | 3300039437 | Bacteria | 40433 |
| 76 | Ga0436363_1046285 | 3300039450 | Bacteria | 10399 |
| 77 | Ga0436363_1342110 | 3300039450 | Bacteria | 5726 |
| 78 | Ga0451577_0000019 | 3300042876 | Bacteria | 506976 |
| 79 | Ga0451577_0003986 | 3300042876 | Bacteria | 15905 |
| 80 | Ga0451577_0013644 | 3300042876 | Bacteria | 7597 |
| 81 | Ga0451577_0022441 | 3300042876 | Bacteria | 5762 |
| 82 | Ga0453683_0000507 | 3300044673 | Bacteria | 44208 |
| 83 | Ga0453684_0000041 | 3300044712 | Bacteria | 690022 |
| 84 | Ga0453684_0000057 | 3300044712 | Bacteria | 506899 |
| 85 | Ga0453684_0000777 | 3300044712 | Bacteria | 110019 |
| 86 | Ga0453684_0010849 | 3300044712 | Bacteria | 15438 |
| 87 | Ga0453684_0074514 | 3300044712 | Bacteria | 4272 |
| 88 | Ga0453684_0125667 | 3300044712 | Bacteria | 3087 |
| 89 | Ga0453684_0163392 | 3300044712 | Bacteria | 2631 |
| 90 | Ga0451576_0005544 | 3300045051 | Bacteria | 15765 |
| 91 | Ga0451576_0015867 | 3300045051 | Bacteria | 8332 |
| 92 | Ga0451576_0054278 | 3300045051 | Bacteria | 4197 |
| 93 | Ga0451576_0069191 | 3300045051 | Bacteria | 3673 |
| 94 | Ga0495592_0001001 | 3300046454 | Bacteria | 19639 |
| 95 | Ga0495651_0003008 | 3300046462 | Bacteria | 13012 |
| 96 | Ga0495653_0001410 | 3300046463 | Bacteria | 18727 |
| 97 | Ga0495662_0017674 | 3300046476 | Bacteria | 3452 |
| 98 | Ga0495664_0000529 | 3300046477 | Bacteria | 19180 |
| 99 | Ga0495664_0017622 | 3300046477 | Bacteria | 4085 |
| 100 | Ga0495608_0000030 | 3300046511 | Bacteria | 145828 |
| 101 | Ga0495618_0001064 | 3300046514 | Bacteria | 18727 |
| 102 | Ga0495628_0003536 | 3300046516 | Bacteria | 13994 |
| 103 | Ga0495643_0004670 | 3300046522 | Bacteria | 9512 |
| 104 | Ga0495642_0001995 | 3300046528 | Bacteria | 8543 |
| 105 | Ga0495652_0002537 | 3300046529 | Bacteria | 18727 |
| 106 | Ga0495640_0001378 | 3300046533 | Bacteria | 19143 |
| 107 | Ga0495587_0000025 | 3300046536 | Bacteria | 147974 |
| 108 | Ga0495645_0000001 | 3300046543 | Bacteria | 657910 |
| 109 | Ga0495667_0000902 | 3300046559 | Bacteria | 19164 |
| 110 | Ga0495634_0000008 | 3300046642 | Bacteria | 163983 |
| 111 | Ga0495635_0000958 | 3300046663 | Bacteria | 19058 |
| 112 | Ga0495661_0005406 | 3300046665 | Bacteria | 9083 |
| 113 | Ga0495657_0001628 | 3300046675 | Bacteria | 19267 |
| 114 | Ga0495599_0002435 | 3300046678 | Bacteria | 10839 |
| 115 | Ga0495646_0000687 | 3300046680 | Bacteria | 18615 |
| 116 | Ga0495600_0009797 | 3300046809 | Bacteria | 5925 |
| 117 | Ga0495581_0034027 | 3300047315 | Bacteria | 2948 |
| 118 | Ga0495604_0000002 | 3300047317 | Bacteria | 530904 |
| 119 | Ga0495674_0000004 | 3300047319 | Bacteria | 531855 |
| 120 | Ga0495680_0007472 | 3300047322 | Bacteria | 10013 |
| 121 | Ga0495687_008722 | 3300047443 | Bacteria | 5758 |
| 122 | Ga0495675_0002952 | 3300047444 | Bacteria | 10214 |
| 123 | Ga0495684_0001494 | 3300047471 | Bacteria | 18699 |
| 124 | Ga0495686_0072165 | 3300047472 | Bacteria | 2123 |
| 125 | Ga0495686_0079229 | 3300047472 | Bacteria | 2009 |
| 126 | Ga0495602_0002434 | 3300048088 | Bacteria | 18960 |
| 127 | Ga0496114_0013111 | 3300048917 | Bacteria | 6641 |
| 128 | Ga0496119_0009236 | 3300048922 | Bacteria | 8497 |
| 129 | Ga0496122_0014262 | 3300048925 | Bacteria | 7697 |
| 130 | Ga0496123_0003186 | 3300048926 | Bacteria | 18722 |
| 131 | Ga0501031_0052661 | 3300049568 | Bacteria | 2652 |
| 132 | Ga0501036_0020572 | 3300049572 | Bacteria | 5542 |
| 133 | Ga0501039_0001446 | 3300049575 | Bacteria | 17478 |
| 134 | Ga0501040_0001409 | 3300049576 | Bacteria | 15208 |
| 135 | Ga0501042_0006601 | 3300049578 | Bacteria | 7546 |
| 136 | Ga0501047_0129478 | 3300049581 | Bacteria | 2404 |
| 137 | Ga0501048_0008255 | 3300049582 | Bacteria | 7877 |
| 138 | Ga0501048_0097474 | 3300049582 | Bacteria | 2074 |
| 139 | Ga0501069_0041152 | 3300049585 | Bacteria | 2553 |
| 140 | Ga0501070_0137917 | 3300049586 | Bacteria | 2014 |
| 141 | Ga0501074_0011216 | 3300049590 | Bacteria | 6511 |
| 142 | Ga0501076_0005026 | 3300049592 | Bacteria | 9465 |
| 143 | Ga0501238_000510 | 3300049671 | Bacteria | 4455 |
| 144 | Ga0501079_0008952 | 3300049741 | Bacteria | 7578 |
| 145 | Ga0501079_0059352 | 3300049741 | Bacteria | 2951 |
| 146 | Ga0501080_0094271 | 3300049742 | Bacteria | 2780 |
| 147 | Ga0501081_0012530 | 3300049743 | Bacteria | 5576 |
| 148 | Ga0501083_0045074 | 3300049744 | Bacteria | 2984 |
| 149 | Ga0501035_0151146 | 3300049822 | Bacteria | 2015 |
| 150 | Ga0501045_0042356 | 3300049824 | Bacteria | 3314 |
| 151 | nmdc:mga05p37_97503_c1 | 3300050507 | Bacteria | 3621 |
| 152 | Ga0495601_0000023 | 3300053077 | Bacteria | 140141 |
| 153 | Ga0495612_0000346 | 3300053078 | Bacteria | 18726 |
| 154 | Ga0495595_0000327 | 3300053084 | Bacteria | 18544 |
| 155 | Ga0495619_0000977 | 3300053085 | Bacteria | 18727 |
| 156 | Ga0500556_0000009 | 3300053104 | Bacteria | 288111 |
| 157 | Ga0501084_0002786 | 3300054114 | Bacteria | 14107 |
| 158 | Ga0501084_0043396 | 3300054114 | Bacteria | 3762 |
| 159 | Ga0587111_0000259 | 3300060346 | Bacteria | 4440 |
| 160 | Ga0530510_0003443 | 3300061734 | Bacteria | 10878 |
| 161 | 2509078182 | 2508501114 | Bacteria | 7082538 |
| 162 | 2511180927 | 2510917027 | Bacteria | 5287437 |
| 163 | 2547502375 | 2547132130 | Bacteria | 4660562 |
| 164 | 2747951337 | 2747842428 | Bacteria | 4689383 |
| 165 | 2765577779 | 2765235840 | Bacteria | 4663337 |
| 166 | 2816519985 | 2816332141 | Bacteria | 4436036 |
| 167 | 2842395686 | 2842391507 | Bacteria | 4486072 |
| 168 | 2842759735 | 2842757796 | Bacteria | 3981385 |
| 169 | 2852653096 | 2852649853 | Bacteria | 4036942 |
| 170 | 2857445080 | 2857442823 | Bacteria | 4562550 |
| 171 | 2857472345 | 2857465823 | Bacteria | 6772595 |
| 172 | 2857597789 | 2857591370 | Bacteria | 6569758 |
| 173 | 2874220384 | 2874220319 | Bacteria | 4594709 |
| 174 | 2884300457 | 2884298095 | Bacteria | 3823049 |
| 175 | 2909043593 | 2909042592 | Bacteria | 6499737 |
| 176 | 2915598697 | 2915597211 | Bacteria | 6475886 |
| 177 | 2919091654 | 2919089067 | Bacteria | 4560942 |
| 178 | 2919134939 | 2919134579 | Bacteria | 4480386 |
| 179 | 2928498474 | 2928496128 | Bacteria | 4631123 |
| 180 | 2929183843 | 2929183550 | Bacteria | 6377511 |
| 181 | 2931381959 | 2931380184 | Bacteria | 4455911 |
| 182 | 2937611275 | 2937610967 | Bacteria | 4618818 |
| 183 | 2939591855 | 2939589442 | Bacteria | 4214238 |
| 184 | 2939626768 | 2939622612 | Bacteria | 4698046 |
| 185 | 2939631134 | 2939626828 | Bacteria | 4695272 |
| 186 | 2941477282 | 2941475908 | Bacteria | 4145589 |
| 187 | 2961047149 | 2961047084 | Bacteria | 4594415 |
| 188 | 2961068519 | 2961064222 | Bacteria | 4749990 |
| 189 | 2974309980 | 2974307012 | Bacteria | 4172388 |
| 190 | 2977250715 | 2977247770 | Bacteria | 4160543 |
| 191 | 2984514800 | 2984514374 | Bacteria | 4172479 |
| 192 | 2987605643 | 2987605356 | Bacteria | 4187822 |
| 193 | 8002871441 | 8002869464 | Bacteria | 3588529 |
| 194 | Ga0070717_10004890 | |||
| 195 | Ga0055526_1002386 | |||
| 196 | Ga0055537_1005177 | |||
| 197 | Ga0055534_1002309 | |||
| 198 | Ga0055528_1001897 | |||
| 199 | Ga0058692_1001834 | |||
| 200 | Ga0065704_10082010 | |||
| 201 | Ga0070668_100019774 | |||
| 202 | Ga0070667_100003760 | |||
| 203 | Ga0070709_10001097 | |||
| 204 | Ga0070714_100000001 | |||
| 205 | Ga0070713_100016621 | |||
| 206 | Ga0070681_10053425 | |||
| 207 | Ga0068867_100057526 | |||
| 208 | Ga0070706_100002127 | |||
| 209 | Ga0070679_100009818 | |||
| 210 | Ga0070697_100007185 | |||
| 211 | Ga0070696_100029524 | |||
| 212 | Ga0068860_100089580 | |||
| 213 | Ga0075364_10007336 | |||
| 214 | Ga0068865_100002340 | |||
| 215 | Ga0105251_10018088 | |||
| 216 | Ga0105240_10038758 | |||
| 217 | Ga0105243_10031500 | |||
| 218 | Ga0105239_10040234 | |||
| 219 | Ga0197907_10252772 | |||
| 220 | Ga0206355_1126656 | |||
| 221 | Ga0213875_10007976 | |||
| 222 | Ga0224712_10012094 | |||
| 223 | Ga0209147_100210 | |||
| 224 | Ga0209565_1000870 | |||
| 225 | Ga0209673_1000204 | |||
| 226 | Ga0209675_1000015 | |||
| 227 | Ga0209676_1001936 | |||
| 228 | Ga0209564_1000037 | |||
| 229 | Ga0209050_1018200 | |||
| 230 | Ga0209050_1018206 | |||
| 231 | Ga0209051_1007058 | |||
| 232 | Ga0209257_1002823 | |||
| 233 | Ga0207713_1013338 | |||
| 234 | Ga0207699_10000308 | |||
| 235 | Ga0207707_10035774 | |||
| 236 | Ga0207652_10011932 | |||
| 237 | Ga0207646_10041541 | |||
| 238 | Ga0207700_10011910 | |||
| 239 | Ga0207664_10000007 | |||
| 240 | Ga0207709_10000421 | |||
| 241 | Ga0207704_10001284 | |||
| 242 | Ga0207658_10001452 | |||
| 243 | Ga0209371_1001408 | |||
| 244 | Ga0268256_1001205 | |||
| 245 | Ga0265316_10008283 | |||
| 246 | Ga0307408_100033362 | |||
| 247 | Ga0316575_10006392 | |||
| 248 | Ga0316577_10007070 | |||
| 249 | Ga0316577_10008118 | |||
| 250 | Ga0316583_10003802 | |||
| 251 | Ga0316592_1000955 | |||
| 252 | Ga0316586_1000385 | |||
| 253 | Ga0373923_0011289 | |||
| 254 | Ga0373936_0000707 | |||
| 255 | Ga0373946_0001178 | |||
| 256 | Ga0373955_0000382 | |||
| 257 | Ga0373924_0004412 | |||
| 258 | Ga0373935_0004577 | |||
| 259 | Ga0373927_0006962 | |||
| 260 | Ga0373937_0001476 | |||
| 261 | Ga0316582_0014885 | |||
| 262 | Ga0316584_0096402 | |||
| 263 | Ga0373925_0000435 | |||
| 264 | Ga0436364_0103207 | |||
| 265 | Ga0436364_0841780 | |||
| 266 | Ga0237819_02030 | |||
| 267 | Ga0400489_56651 | |||
| 268 | Ga0436365_1136540 | |||
| 269 | Ga0436363_1046285 | |||
| 270 | Ga0436363_1342110 | |||
| 271 | Ga0451577_0000019 | |||
| 272 | Ga0451577_0003986 | |||
| 273 | Ga0451577_0013644 | |||
| 274 | Ga0451577_0022441 | |||
| 275 | Ga0453683_0000507 | |||
| 276 | Ga0453684_0000041 | |||
| 277 | Ga0453684_0000057 | |||
| 278 | Ga0453684_0000777 | |||
| 279 | Ga0453684_0010849 | |||
| 280 | Ga0453684_0074514 | |||
| 281 | Ga0453684_0125667 | |||
| 282 | Ga0453684_0163392 | |||
| 283 | Ga0451576_0005544 | |||
| 284 | Ga0451576_0015867 | |||
| 285 | Ga0451576_0054278 | |||
| 286 | Ga0451576_0069191 | |||
| 287 | Ga0495592_0001001 | |||
| 288 | Ga0495651_0003008 | |||
| 289 | Ga0495653_0001410 | |||
| 290 | Ga0495662_0017674 | |||
| 291 | Ga0495664_0000529 | |||
| 292 | Ga0495664_0017622 | |||
| 293 | Ga0495608_0000030 | |||
| 294 | Ga0495618_0001064 | |||
| 295 | Ga0495628_0003536 | |||
| 296 | Ga0495643_0004670 | |||
| 297 | Ga0495642_0001995 | |||
| 298 | Ga0495652_0002537 | |||
| 299 | Ga0495640_0001378 | |||
| 300 | Ga0495587_0000025 | |||
| 301 | Ga0495645_0000001 | |||
| 302 | Ga0495667_0000902 | |||
| 303 | Ga0495634_0000008 | |||
| 304 | Ga0495635_0000958 | |||
| 305 | Ga0495661_0005406 | |||
| 306 | Ga0495657_0001628 | |||
| 307 | Ga0495599_0002435 | |||
| 308 | Ga0495646_0000687 | |||
| 309 | Ga0495600_0009797 | |||
| 310 | Ga0495581_0034027 | |||
| 311 | Ga0495604_0000002 | |||
| 312 | Ga0495674_0000004 | |||
| 313 | Ga0495680_0007472 | |||
| 314 | Ga0495687_008722 | |||
| 315 | Ga0495675_0002952 | |||
| 316 | Ga0495684_0001494 | |||
| 317 | Ga0495686_0072165 | |||
| 318 | Ga0495686_0079229 | |||
| 319 | Ga0495602_0002434 | |||
| 320 | Ga0496114_0013111 | |||
| 321 | Ga0496119_0009236 | |||
| 322 | Ga0496122_0014262 | |||
| 323 | Ga0496123_0003186 | |||
| 324 | Ga0501031_0052661 | |||
| 325 | Ga0501036_0020572 | |||
| 326 | Ga0501039_0001446 | |||
| 327 | Ga0501040_0001409 | |||
| 328 | Ga0501042_0006601 | |||
| 329 | Ga0501047_0129478 | |||
| 330 | Ga0501048_0008255 | |||
| 331 | Ga0501048_0097474 | |||
| 332 | Ga0501069_0041152 | |||
| 333 | Ga0501070_0137917 | |||
| 334 | Ga0501074_0011216 | |||
| 335 | Ga0501076_0005026 | |||
| 336 | Ga0501238_000510 | |||
| 337 | Ga0501079_0008952 | |||
| 338 | Ga0501079_0059352 | |||
| 339 | Ga0501080_0094271 | |||
| 340 | Ga0501081_0012530 | |||
| 341 | Ga0501083_0045074 | |||
| 342 | Ga0501035_0151146 | |||
| 343 | Ga0501045_0042356 | |||
| 344 | nmdc:mga05p37_97503_c1 | |||
| 345 | Ga0495601_0000023 | |||
| 346 | Ga0495612_0000346 | |||
| 347 | Ga0495595_0000327 | |||
| 348 | Ga0495619_0000977 | |||
| 349 | Ga0500556_0000009 | |||
| 350 | Ga0501084_0002786 | |||
| 351 | Ga0501084_0043396 | |||
| 352 | Ga0587111_0000259 | |||
| 353 | Ga0530510_0003443 | |||
| 354 | 2509078182 | |||
| 355 | 2511180927 | |||
| 356 | 2547502375 | |||
| 357 | 2747951337 | |||
| 358 | 2765577779 | |||
| 359 | 2816519985 | |||
| 360 | 2842395686 | |||
| 361 | 2842759735 | |||
| 362 | 2852653096 | |||
| 363 | 2857445080 | |||
| 364 | 2857472345 | |||
| 365 | 2857597789 | |||
| 366 | 2874220384 | |||
| 367 | 2884300457 | |||
| 368 | 2909043593 | |||
| 369 | 2915598697 | |||
| 370 | 2919091654 | |||
| 371 | 2919134939 | |||
| 372 | 2928498474 | |||
| 373 | 2929183843 | |||
| 374 | 2931381959 | |||
| 375 | 2937611275 | |||
| 376 | 2939591855 | |||
| 377 | 2939626768 | |||
| 378 | 2939631134 | |||
| 379 | 2941477282 | |||
| 380 | 2961047149 | |||
| 381 | 2961068519 | |||
| 382 | 2974309980 | |||
| 383 | 2977250715 | |||
| 384 | 2984514800 | |||
| 385 | 2987605643 | |||
| 386 | 8002871441 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5ty0-assembly1.cif.gz_A | 2.22 angstrom crystal structure of n-terminal fragment (residues 1-419) of elongation factor g from legionella pneumophila. | 0.973 | 4 | 407 |
| 5tv2-assembly1.cif.gz_A | crystal structure of a fragment (1-405) of an elongation factor g from vibrio vulnificus cmcp6 | 0.9709 | 1 | 406 |
| 5ty0-assembly1.cif.gz_A | 2.22 angstrom crystal structure of n-terminal fragment (residues 1-419) of elongation factor g from legionella pneumophila. | 0.9705 | 4 | 407 |
| 6b8d-assembly1.cif.gz_A | 1.78 angstrom resolution crystal structure of n-terminal fragment (residues 1-405) of elongation factor g from haemophilus influenzae | 0.9684 | 1 | 406 |
| 5tv2-assembly1.cif.gz_A | crystal structure of a fragment (1-405) of an elongation factor g from vibrio vulnificus cmcp6 | 0.9683 | 1 | 406 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4myuA05 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.9814 | 622 | 704 | 3.30.70.240 |
| af_Q9USZ1_675_770_3.30.70.240 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.9754 | 622 | 711 | 3.30.70.240 |
| af_Q9VCX4_321_413_2.40.30.10 | Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors | 0.9746 | 315 | 400 | 2.40.30.10 |
| 5ty0A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9727 | 4 | 292 | 3.40.50.300 |
| af_A4I3S3_442_510_3.30.70.870 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Elongation Factor G (Translational Gtpase), domain 3 | 0.9699 | 419 | 481 | 3.30.70.870 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-B6VDP9-F1-model_v4 | Elongation factor EF-G | 0.9999 | 130 | 236 |
GO:0003746
GO:0005525 GO:0032790 |
| AF-A0A485C1C5-F1-model_v4 | Elongation factor G | 0.9944 | 104 | 292 |
GO:0003746
GO:0003924 GO:0005525 GO:0032790 |
| AF-A0A529L458-F1-model_v4 | GTP-binding protein | 0.9907 | 101 | 216 |
GO:0003924
GO:0005525 GO:0032790 |
| AF-A0A484YZL1-F1-model_v4 | Elongation factor G | 0.9903 | 87 | 286 |
GO:0003746
GO:0003924 GO:0005525 GO:0032790 |
| AF-K2BZK7-F1-model_v4 | Elongation factor G | 0.99 | 162 | 393 |
GO:0003746
GO:0005525 GO:0032790 |