F298475
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 194 | 150 | 165 | 496 |
Family's Representative Sequence
| Representative Sequence | 3300006186|Ga0075369_10004212|Ga0075369_100042123 |
| Length | 519 |
| Sequence | MVEEFAPALPPPAEYAKPDPMPFQAPRDAAVIDIGSNSVRLVVYRLEGRAIWTVFNEKVLAGLGRDLAKTGRLSTDGVVQTLQALKRFRAVLEAVGPAETFVVATAAARDAQDGADFIARVKAETGFTVRVLTGEEEAHYAAVGVLAGAPAAVGVVGDLGGASLELIRLSATGAGQGVTLPLGPFSLAGANGAHAGFDGERVRRLARERVAAVAADFRTDTFHAVGGAWRNLALLHMRLSGYPLHVVHQYEIPAAEALEAARLVSHQSKSSLERIEGMSKKRSETLPYAAVVLEILIEQLALKRIEISAYGVREGLLFEAMPPRVRGLDPLVEGCTALGARQGISDDLGPALETWIAPAFRALPPLFGERDETLVSAACRLSDVGARLHPDHRADLVFEQVLRAPIAGQSHAERSFLAVAAHARHATNFNPPELATLERLLSPAQLKRARALGATIRLACDLSGRSPSLLAHSRLALDKNHLTLAAEPGFADLLLGEQTSKRANTAAQHLGLKSKIITG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2510917020 | Caulobacter sp. AP07 | Isolate | Rhizosphere |
| 2 | 2582581279 | Caulobacter henricii OK261 | Isolate | Rhizosphere |
| 3 | 2582581280 | Caulobacter henricii CF287 | Isolate | Rhizosphere |
| 4 | 2582581293 | Caulobacter henricii YR570 | Isolate | Rhizosphere |
| 5 | 2585428106 | Caulobacter sp. OV484 | Isolate | Rhizosphere |
| 6 | 2643221545 | Caulobacter sp. Root1455 | Isolate | Unclassified |
| 7 | 2643221552 | Caulobacter sp. Root1472 | Isolate | Unclassified |
| 8 | 2643221574 | Brevundimonas sp. Root608 | Isolate | Unclassified |
| 9 | 2643221583 | Caulobacter sp. Root655 | Isolate | Unclassified |
| 10 | 2643221584 | Caulobacter sp. Root656 | Isolate | Unclassified |
| 11 | 2643221640 | Caulobacter sp. Root342 | Isolate | Unclassified |
| 12 | 2643221642 | Caulobacter sp. Root343 | Isolate | Unclassified |
| 13 | 2643221663 | Brevundimonas sp. Root1279 | Isolate | Unclassified |
| 14 | 2643221691 | Caulobacter sp. Root487D2Y | Isolate | Unclassified |
| 15 | 2643221699 | Brevundimonas sp. Root1423 | Isolate | Unclassified |
| 16 | 2791355048 | Caulobacter flavus CGMCC1 15093 | Isolate | Rhizosphere |
| 17 | 2818991435 | Caulobacter henricii 536 | Isolate | Unclassified |
| 18 | 2818991454 | Caulobacter rhizosphaerae 3260 | Isolate | Rhizosphere |
| 19 | 2843744320 | Caulobacter flavus RHGG3 | Isolate | Unclassified |
| 20 | 2849560528 | Caulobacter zeae 410 | Isolate | Unclassified |
| 21 | 2849573788 | Caulobacter endophyticus 774 | Isolate | Unclassified |
| 22 | 2851153111 | Caulobacter radicis 736 | Isolate | Unclassified |
| 23 | 2857504554 | Caulobacter sp. R-72291 | Isolate | Unclassified |
| 24 | 2884960567 | Caulobacter sp. 602-1 | Isolate | Rhizosphere |
| 25 | 2898329390 | Caulobacter sp. 602-2 | Isolate | Rhizosphere |
| 26 | 2928531327 | Caulobacter sp. 1776 | Isolate | Rhizosphere |
| 27 | 2928972540 | Brevundimonas sp. 1080 | Isolate | Rhizosphere |
| 28 | 2941485952 | Brevundimonas faecalis 2814 | Isolate | Rhizosphere |
| 29 | 2977240413 | Brevundimonas vesicularis SORGH_AS 431 | Isolate | Unclassified |
| 30 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 31 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 32 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 33 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 34 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 35 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 36 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 37 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 38 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 39 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 43 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 45 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 46 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 47 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 52 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 53 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 54 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 56 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 65 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 66 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 67 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 68 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 69 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 70 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 71 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 72 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 73 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 74 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 75 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 76 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 77 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 78 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 79 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 80 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 81 | 3300042438 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 | Metagenome | Rhizosphere |
| 82 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 83 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 112 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 113 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 114 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 115 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 116 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 117 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 118 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 119 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 125 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 126 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 127 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 128 | 3300053091 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere | Metagenome | Endosphere |
| 129 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 130 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 131 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 132 | 3300053102 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere | Metagenome | Endosphere |
| 133 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 134 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 135 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 136 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 137 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 138 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 139 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 140 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 141 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 142 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 143 | 3300053138 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere | Metagenome | Endosphere |
| 144 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 145 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 146 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 147 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 148 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 149 | 3300053731 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere | Metagenome | Endosphere |
| 150 | 3300053735 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 84.02 |
| Metatranscriptomes | 0.52 |
| Isolates | 15.46 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 32.99 |
| Nodule | 0 |
| Rhizoplane | 2.06 |
| Rhizosphere | 46.91 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 18.04 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10037333 | 3300003320 | Bacteria | 3210 |
| 2 | rootH1_10010591 | 3300003316 | Bacteria | 6773 |
| 3 | rootH1_10010591 | 3300003323 | Bacteria | 4955 |
| 4 | Ga0006562J51391_1097268 | 3300003578 | Bacteria | 1790 |
| 5 | Ga0055524_1005398 | 3300003775 | Bacteria | 5716 |
| 6 | Ga0055536_1000874 | 3300003781 | Bacteria | 19576 |
| 7 | Ga0055528_1001838 | 3300003790 | Bacteria | 12107 |
| 8 | Ga0055530_10003521 | 3300003791 | Bacteria | 8840 |
| 9 | Ga0055531_10001057 | 3300003794 | Bacteria | 21685 |
| 10 | Ga0055531_10005345 | 3300003794 | Bacteria | 7529 |
| 11 | Ga0065165_1004796 | 3300005262 | Bacteria | 8073 |
| 12 | Ga0070660_100012178 | 3300005339 | Bacteria | 6140 |
| 13 | Ga0070659_100007027 | 3300005366 | Bacteria | 8152 |
| 14 | Ga0070665_100011329 | 3300005548 | Bacteria | 9020 |
| 15 | Ga0068855_100034904 | 3300005563 | Bacteria | 5994 |
| 16 | Ga0070664_100164844 | 3300005564 | Bacteria | 1963 |
| 17 | Ga0075369_10004212 | 3300006186 | Bacteria | 5301 |
| 18 | Ga0075366_10003148 | 3300006195 | Bacteria | 8638 |
| 19 | Ga0075370_10060160 | 3300006353 | Bacteria | 2164 |
| 20 | Ga0105240_10001656 | 3300009093 | Bacteria | 37802 |
| 21 | Ga0157373_10001432 | 3300013100 | Bacteria | 18200 |
| 22 | Ga0157373_10036822 | 3300013100 | Bacteria | 3510 |
| 23 | Ga0157369_10106223 | 3300013105 | Bacteria | 2988 |
| 24 | Ga0163163_10089357 | 3300014325 | Bacteria | 3093 |
| 25 | Ga0213876_10000170 | 3300021384 | Bacteria | 68004 |
| 26 | Ga0213876_10037530 | 3300021384 | Bacteria | 2556 |
| 27 | Ga0209565_1000521 | 3300025263 | Bacteria | 27399 |
| 28 | Ga0209673_1002139 | 3300025273 | Bacteria | 14718 |
| 29 | Ga0209676_1000046 | 3300025292 | Bacteria | 409173 |
| 30 | Ga0209676_1000336 | 3300025292 | Bacteria | 89848 |
| 31 | Ga0209676_1000476 | 3300025292 | Bacteria | 66212 |
| 32 | Ga0209564_1001481 | 3300025295 | Bacteria | 23701 |
| 33 | Ga0209758_1000450 | 3300025297 | Bacteria | 68773 |
| 34 | Ga0209758_1006648 | 3300025297 | Bacteria | 8181 |
| 35 | Ga0209050_1000506 | 3300025298 | Bacteria | 66220 |
| 36 | Ga0209050_1000843 | 3300025298 | Bacteria | 42044 |
| 37 | Ga0209050_1010591 | 3300025298 | Bacteria | 4516 |
| 38 | Ga0209051_1002368 | 3300025303 | Bacteria | 13627 |
| 39 | Ga0209257_1000259 | 3300025304 | Bacteria | 122101 |
| 40 | Ga0209257_1000481 | 3300025304 | Bacteria | 72432 |
| 41 | Ga0209257_1000865 | 3300025304 | Bacteria | 43126 |
| 42 | Ga0209257_1001289 | 3300025304 | Bacteria | 30577 |
| 43 | Ga0207705_10111472 | 3300025909 | Bacteria | 2022 |
| 44 | Ga0207695_10007051 | 3300025913 | Bacteria | 14414 |
| 45 | Ga0207690_10002500 | 3300025932 | Bacteria | 11119 |
| 46 | Ga0207679_10036373 | 3300025945 | Bacteria | 3492 |
| 47 | Ga0307515_10074766 | 3300028794 | Bacteria | 4525 |
| 48 | Ga0307515_10080289 | 3300028794 | Bacteria | 4257 |
| 49 | Ga0265338_10016213 | 3300028800 | Bacteria | 8124 |
| 50 | Ga0265338_10019036 | 3300028800 | Bacteria | 7312 |
| 51 | Ga0265338_10035303 | 3300028800 | Bacteria | 4810 |
| 52 | Ga0265320_10000496 | 3300031240 | Bacteria | 30651 |
| 53 | Ga0265325_10013815 | 3300031241 | Bacteria | 4584 |
| 54 | Ga0265327_10000568 | 3300031251 | Bacteria | 62780 |
| 55 | Ga0265327_10000990 | 3300031251 | Bacteria | 40426 |
| 56 | Ga0265327_10003957 | 3300031251 | Bacteria | 13542 |
| 57 | Ga0265314_10008050 | 3300031711 | Bacteria | 9081 |
| 58 | Ga0265314_10011487 | 3300031711 | Bacteria | 7305 |
| 59 | Ga0307414_10039258 | 3300032004 | Bacteria | 3187 |
| 60 | Ga0307414_10053413 | 3300032004 | Bacteria | 2817 |
| 61 | Ga0395899_0091940 | 3300037312 | Bacteria | 2198 |
| 62 | Ga0395900_0133137 | 3300037418 | Bacteria | 2547 |
| 63 | Ga0395898_0031458 | 3300037466 | Bacteria | 5302 |
| 64 | Ga0395901_0023852 | 3300038443 | Bacteria | 6275 |
| 65 | Ga0237819_00112 | 3300038705 | Bacteria | 29936 |
| 66 | Ga0436365_0727276 | 3300039437 | Bacteria | 64269 |
| 67 | Ga0436365_0961869 | 3300039437 | Bacteria | 7699 |
| 68 | Ga0436360_0100898 | 3300039438 | Bacteria | 4673 |
| 69 | Ga0436361_0412336 | 3300039447 | Bacteria | 6436 |
| 70 | Ga0436361_0663447 | 3300039447 | Bacteria | 7731 |
| 71 | Ga0436363_0090249 | 3300039450 | Bacteria | 3313 |
| 72 | Ga0439446_0001620 | 3300042156 | Bacteria | 5193 |
| 73 | Ga0439459_0005198 | 3300042438 | Bacteria | 2128 |
| 74 | Ga0466969_0006122 | 3300044656 | Bacteria | 6405 |
| 75 | Ga0495627_000269 | 3300046453 | Bacteria | 52989 |
| 76 | Ga0495638_0000347 | 3300046460 | Bacteria | 58280 |
| 77 | Ga0495638_0000492 | 3300046460 | Bacteria | 47203 |
| 78 | Ga0495638_0001901 | 3300046460 | Bacteria | 18017 |
| 79 | Ga0495638_0031762 | 3300046460 | Bacteria | 3390 |
| 80 | Ga0495650_0000007 | 3300046471 | Bacteria | 718072 |
| 81 | Ga0495594_0033490 | 3300046499 | Bacteria | 2794 |
| 82 | Ga0495583_0000037 | 3300046506 | Bacteria | 244437 |
| 83 | Ga0495606_0002879 | 3300046507 | Bacteria | 19020 |
| 84 | Ga0495610_0002156 | 3300046512 | Bacteria | 16742 |
| 85 | Ga0495616_0000112 | 3300046513 | Bacteria | 71263 |
| 86 | Ga0495620_0013285 | 3300046515 | Bacteria | 4222 |
| 87 | Ga0495631_0003499 | 3300046518 | Bacteria | 8589 |
| 88 | Ga0495632_0018802 | 3300046519 | Bacteria | 3781 |
| 89 | Ga0495637_0011969 | 3300046520 | Bacteria | 4159 |
| 90 | Ga0495637_0016669 | 3300046520 | Bacteria | 3433 |
| 91 | Ga0495648_0000777 | 3300046524 | Bacteria | 34002 |
| 92 | Ga0495654_0000100 | 3300046530 | Bacteria | 98615 |
| 93 | Ga0495609_0020856 | 3300046538 | Bacteria | 3024 |
| 94 | Ga0495597_0001857 | 3300046542 | Bacteria | 14445 |
| 95 | Ga0495622_0008551 | 3300046557 | Bacteria | 4743 |
| 96 | Ga0495633_0002322 | 3300046558 | Bacteria | 13541 |
| 97 | Ga0495668_0000252 | 3300046616 | Bacteria | 76175 |
| 98 | Ga0495625_0001571 | 3300046660 | Bacteria | 27152 |
| 99 | Ga0495625_0009424 | 3300046660 | Bacteria | 8169 |
| 100 | Ga0495625_0018535 | 3300046660 | Bacteria | 5429 |
| 101 | Ga0495625_0033322 | 3300046660 | Bacteria | 3810 |
| 102 | Ga0495657_0146448 | 3300046675 | Bacteria | 1469 |
| 103 | Ga0495613_0002661 | 3300046689 | Bacteria | 13410 |
| 104 | Ga0495671_0039780 | 3300046692 | Bacteria | 2373 |
| 105 | Ga0495649_0000279 | 3300046694 | Bacteria | 45005 |
| 106 | Ga0495672_0003286 | 3300047320 | Bacteria | 13983 |
| 107 | Ga0495673_0000186 | 3300047469 | Bacteria | 100563 |
| 108 | Ga0495673_0000402 | 3300047469 | Bacteria | 50662 |
| 109 | Ga0495686_0000572 | 3300047472 | Bacteria | 52381 |
| 110 | Ga0495686_0003246 | 3300047472 | Bacteria | 14273 |
| 111 | Ga0495686_0054395 | 3300047472 | Bacteria | 2506 |
| 112 | Ga0495593_0030823 | 3300047673 | Bacteria | 2932 |
| 113 | Ga0496106_0048816 | 3300048909 | Bacteria | 3188 |
| 114 | Ga0496107_0000156 | 3300048910 | Bacteria | 34715 |
| 115 | Ga0496115_0001997 | 3300048918 | Bacteria | 14581 |
| 116 | Ga0496115_0030651 | 3300048918 | Bacteria | 4233 |
| 117 | Ga0496121_0000802 | 3300048924 | Bacteria | 57240 |
| 118 | Ga0496122_0002601 | 3300048925 | Bacteria | 25298 |
| 119 | Ga0496123_0001897 | 3300048926 | Bacteria | 27276 |
| 120 | Ga0496125_0011187 | 3300048928 | Bacteria | 8995 |
| 121 | Ga0496125_0015353 | 3300048928 | Bacteria | 7414 |
| 122 | Ga0496126_0000898 | 3300048929 | Bacteria | 51758 |
| 123 | Ga0495678_003760 | 3300049459 | Bacteria | 9166 |
| 124 | Ga0501037_0062115 | 3300049573 | Bacteria | 2724 |
| 125 | Ga0501047_0116489 | 3300049581 | Bacteria | 2554 |
| 126 | Ga0501070_0026136 | 3300049586 | Bacteria | 4899 |
| 127 | Ga0501044_0017123 | 3300049823 | Bacteria | 7778 |
| 128 | nmdc:mga0k408_68181_c1 | 3300050493 | Bacteria | 2075 |
| 129 | Ga0500578_0000092 | 3300053086 | Bacteria | 102206 |
| 130 | Ga0500643_000273 | 3300053087 | Bacteria | 45054 |
| 131 | Ga0500643_002713 | 3300053087 | Bacteria | 8894 |
| 132 | Ga0500643_004128 | 3300053087 | Bacteria | 6678 |
| 133 | Ga0500644_0001718 | 3300053088 | Bacteria | 5692 |
| 134 | Ga0500647_0024605 | 3300053091 | Bacteria | 2832 |
| 135 | Ga0500651_0002118 | 3300053093 | Bacteria | 10328 |
| 136 | Ga0500651_0036205 | 3300053093 | Bacteria | 3110 |
| 137 | Ga0500566_0014023 | 3300053094 | Bacteria | 4711 |
| 138 | Ga0500641_0000989 | 3300053096 | Bacteria | 10095 |
| 139 | Ga0500554_001223 | 3300053102 | Bacteria | 4986 |
| 140 | Ga0500556_0001038 | 3300053104 | Bacteria | 14488 |
| 141 | Ga0500562_000192 | 3300053108 | Bacteria | 16565 |
| 142 | Ga0500569_001891 | 3300053109 | Bacteria | 4038 |
| 143 | Ga0500572_000295 | 3300053111 | Bacteria | 17845 |
| 144 | Ga0500594_0000055 | 3300053118 | Bacteria | 35289 |
| 145 | Ga0500595_001381 | 3300053119 | Bacteria | 13016 |
| 146 | Ga0500595_030870 | 3300053119 | Bacteria | 1801 |
| 147 | Ga0500608_000307 | 3300053122 | Bacteria | 18930 |
| 148 | Ga0500608_003973 | 3300053122 | Bacteria | 5648 |
| 149 | Ga0500618_000043 | 3300053125 | Bacteria | 110342 |
| 150 | Ga0500658_0007851 | 3300053134 | Bacteria | 3943 |
| 151 | Ga0500559_0000227 | 3300053136 | Bacteria | 44722 |
| 152 | Ga0500559_0000327 | 3300053136 | Bacteria | 35827 |
| 153 | Ga0500559_0003753 | 3300053136 | Bacteria | 7375 |
| 154 | Ga0500559_0009000 | 3300053136 | Bacteria | 4343 |
| 155 | Ga0500564_000178 | 3300053138 | Bacteria | 16988 |
| 156 | Ga0500590_003907 | 3300053148 | Bacteria | 6952 |
| 157 | Ga0500616_0007421 | 3300053153 | Bacteria | 6973 |
| 158 | Ga0500616_0019532 | 3300053153 | Bacteria | 3818 |
| 159 | Ga0500622_0000047 | 3300053156 | Bacteria | 149427 |
| 160 | Ga0500636_0040576 | 3300053177 | Bacteria | 2752 |
| 161 | Ga0500645_000703 | 3300053730 | Bacteria | 20751 |
| 162 | Ga0500645_001971 | 3300053730 | Bacteria | 9695 |
| 163 | Ga0500645_002828 | 3300053730 | Bacteria | 7477 |
| 164 | Ga0500609_000097 | 3300053731 | Bacteria | 11261 |
| 165 | Ga0500596_000136 | 3300053735 | Bacteria | 10927 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046675 | Ga0495657_0146448 | Ga0495657_0146448_148_1446 | 427 |
| 2 | 3300031251 | Ga0265327_10000568 | Ga0265327_1000056813 | 431 |
| 3 | 3300053119 | Ga0500595_030870 | Ga0500595_030870_243_1751 | 435 |
| 4 | 3300047469 | Ga0495673_0000402 | Ga0495673_0000402_4906_6396 | 451 |
| 5 | 3300046453 | Ga0495627_000269 | Ga0495627_000269_42553_44043 | 457 |
| 6 | 3300009093 | Ga0105240_10001656 | Ga0105240_1000165622 | 458 |
| 7 | 3300025913 | Ga0207695_10007051 | Ga0207695_100070512 | 458 |
| 8 | 3300046692 | Ga0495671_0039780 | Ga0495671_0039780_685_2106 | 462 |
| 9 | 3300042156 | Ga0439446_0001620 | Ga0439446_0001620_1685_3175 | 463 |
| 10 | 3300047472 | Ga0495686_0054395 | Ga0495686_0054395_21_1463 | 468 |
| 11 | 3300028800 | Ga0265338_10035303 | Ga0265338_100353033 | 470 |
| 12 | 3300049581 | Ga0501047_0116489 | Ga0501047_0116489_1094_2539 | 470 |
| 13 | 3300025297 | Ga0209758_1000450 | Ga0209758_100045023 | 475 |
| 14 | 3300039437 | Ga0436365_0961869 | Ga0436365_0961869_935_2377 | 475 |
| 15 | 3300038705 | Ga0237819_00112 | Ga0237819_00112_14403_15875 | 476 |
| 16 | 3300053087 | Ga0500643_000273 | Ga0500643_000273_15976_17466 | 476 |
| 17 | 3300003794 | Ga0055531_10005345 | Ga0055531_100053456 | 477 |
| 18 | 3300025304 | Ga0209257_1000259 | Ga0209257_100025970 | 477 |
| 19 | 3300042438 | Ga0439459_0005198 | Ga0439459_0005198_575_2062 | 477 |
| 20 | 3300049573 | Ga0501037_0062115 | Ga0501037_0062115_919_2415 | 477 |
| 21 | 3300049823 | Ga0501044_0017123 | Ga0501044_0017123_5152_6648 | 477 |
| 22 | 3300046660 | Ga0495625_0018535 | Ga0495625_0018535_877_2367 | 478 |
| 23 | 3300031251 | Ga0265327_10000990 | Ga0265327_1000099017 | 480 |
| 24 | 3300021384 | Ga0213876_10037530 | Ga0213876_100375302 | 481 |
| 25 | 3300031240 | Ga0265320_10000496 | Ga0265320_100004963 | 481 |
| 26 | 3300031241 | Ga0265325_10013815 | Ga0265325_100138154 | 481 |
| 27 | 3300031711 | Ga0265314_10011487 | Ga0265314_100114876 | 481 |
| 28 | 3300048928 | Ga0496125_0011187 | Ga0496125_0011187_1473_2999 | 481 |
| 29 | 3300048929 | Ga0496126_0000898 | Ga0496126_0000898_3115_4641 | 481 |
| 30 | 3300003578 | Ga0006562J51391_1097268 | Ga0006562J51391_10972681 | 482 |
| 31 | 3300005563 | Ga0068855_100034904 | Ga0068855_1000349044 | 482 |
| 32 | 3300013105 | Ga0157369_10106223 | Ga0157369_101062232 | 482 |
| 33 | 3300046499 | Ga0495594_0033490 | Ga0495594_0033490_163_1662 | 482 |
| 34 | 3300046515 | Ga0495620_0013285 | Ga0495620_0013285_2300_3796 | 482 |
| 35 | 3300046520 | Ga0495637_0016669 | Ga0495637_0016669_528_2024 | 482 |
| 36 | 3300046538 | Ga0495609_0020856 | Ga0495609_0020856_253_1749 | 482 |
| 37 | 3300046542 | Ga0495597_0001857 | Ga0495597_0001857_4851_6347 | 482 |
| 38 | 3300046557 | Ga0495622_0008551 | Ga0495622_0008551_821_2317 | 482 |
| 39 | 3300046558 | Ga0495633_0002322 | Ga0495633_0002322_7336_8823 | 482 |
| 40 | 3300046694 | Ga0495649_0000279 | Ga0495649_0000279_20624_22111 | 482 |
| 41 | 3300047673 | Ga0495593_0030823 | Ga0495593_0030823_1210_2706 | 482 |
| 42 | 3300048925 | Ga0496122_0002601 | Ga0496122_0002601_1361_2848 | 482 |
| 43 | 3300048926 | Ga0496123_0001897 | Ga0496123_0001897_8199_9686 | 482 |
| 44 | 3300048928 | Ga0496125_0015353 | Ga0496125_0015353_5677_7179 | 482 |
| 45 | 3300053093 | Ga0500651_0036205 | Ga0500651_0036205_1470_2966 | 482 |
| 46 | 3300053094 | Ga0500566_0014023 | Ga0500566_0014023_2638_4134 | 482 |
| 47 | 3300053109 | Ga0500569_001891 | Ga0500569_001891_858_2354 | 482 |
| 48 | 3300053119 | Ga0500595_001381 | Ga0500595_001381_3558_5054 | 482 |
| 49 | 3300053122 | Ga0500608_003973 | Ga0500608_003973_2716_4212 | 482 |
| 50 | 3300053136 | Ga0500559_0009000 | Ga0500559_0009000_2498_3994 | 482 |
| 51 | 3300053148 | Ga0500590_003907 | Ga0500590_003907_5146_6642 | 482 |
| 52 | 3300053177 | Ga0500636_0040576 | Ga0500636_0040576_1202_2698 | 482 |
| 53 | 3300053735 | Ga0500596_000136 | Ga0500596_000136_4855_6351 | 482 |
| 54 | iso_pu_bacteria | 2928972540 | 2928975356 | 482 |
| 55 | iso_pu_bacteria | 2941485952 | 2941487315 | 482 |
| 56 | iso_pu_bacteria | 2977240413 | 2977241656 | 482 |
| 57 | 3300005339 | Ga0070660_100012178 | Ga0070660_1000121782 | 483 |
| 58 | 3300005548 | Ga0070665_100011329 | Ga0070665_1000113291 | 483 |
| 59 | 3300021384 | Ga0213876_10000170 | Ga0213876_1000017038 | 483 |
| 60 | 3300025909 | Ga0207705_10111472 | Ga0207705_101114722 | 483 |
| 61 | 3300039437 | Ga0436365_0727276 | Ga0436365_0727276_24217_25737 | 483 |
| 62 | 3300039450 | Ga0436363_0090249 | Ga0436363_0090249_57_1577 | 483 |
| 63 | 3300049586 | Ga0501070_0026136 | Ga0501070_0026136_440_1981 | 483 |
| 64 | 3300053087 | Ga0500643_004128 | Ga0500643_004128_4938_6467 | 483 |
| 65 | 3300053091 | Ga0500647_0024605 | Ga0500647_0024605_236_1753 | 483 |
| 66 | 3300053096 | Ga0500641_0000989 | Ga0500641_0000989_814_2343 | 483 |
| 67 | 3300053104 | Ga0500556_0001038 | Ga0500556_0001038_4853_6382 | 483 |
| 68 | 3300053108 | Ga0500562_000192 | Ga0500562_000192_4890_6419 | 483 |
| 69 | 3300053111 | Ga0500572_000295 | Ga0500572_000295_3752_5269 | 483 |
| 70 | 3300053136 | Ga0500559_0000227 | Ga0500559_0000227_27129_28646 | 483 |
| 71 | 3300053153 | Ga0500616_0019532 | Ga0500616_0019532_138_1667 | 483 |
| 72 | 3300053730 | Ga0500645_000703 | Ga0500645_000703_8293_9822 | 483 |
| 73 | 3300053730 | Ga0500645_002828 | Ga0500645_002828_4690_6219 | 483 |
| 74 | 3300003775 | Ga0055524_1005398 | Ga0055524_10053983 | 484 |
| 75 | 3300003781 | Ga0055536_1000874 | Ga0055536_10008749 | 484 |
| 76 | 3300003790 | Ga0055528_1001838 | Ga0055528_10018384 | 484 |
| 77 | 3300003791 | Ga0055530_10003521 | Ga0055530_100035217 | 484 |
| 78 | 3300003794 | Ga0055531_10001057 | Ga0055531_100010574 | 484 |
| 79 | 3300005262 | Ga0065165_1004796 | Ga0065165_10047964 | 484 |
| 80 | 3300005366 | Ga0070659_100007027 | Ga0070659_1000070277 | 484 |
| 81 | 3300005564 | Ga0070664_100164844 | Ga0070664_1001648442 | 484 |
| 82 | 3300006195 | Ga0075366_10003148 | Ga0075366_100031487 | 484 |
| 83 | 3300006353 | Ga0075370_10060160 | Ga0075370_100601602 | 484 |
| 84 | 3300013100 | Ga0157373_10001432 | Ga0157373_100014326 | 484 |
| 85 | 3300013100 | Ga0157373_10036822 | Ga0157373_100368222 | 484 |
| 86 | 3300025263 | Ga0209565_1000521 | Ga0209565_100052111 | 484 |
| 87 | 3300025273 | Ga0209673_1002139 | Ga0209673_10021395 | 484 |
| 88 | 3300025292 | Ga0209676_1000046 | Ga0209676_1000046218 | 484 |
| 89 | 3300025292 | Ga0209676_1000336 | Ga0209676_100033626 | 484 |
| 90 | 3300025292 | Ga0209676_1000476 | Ga0209676_100047614 | 484 |
| 91 | 3300025295 | Ga0209564_1001481 | Ga0209564_100148119 | 484 |
| 92 | 3300025297 | Ga0209758_1006648 | Ga0209758_10066483 | 484 |
| 93 | 3300025298 | Ga0209050_1000506 | Ga0209050_100050614 | 484 |
| 94 | 3300025298 | Ga0209050_1000843 | Ga0209050_100084333 | 484 |
| 95 | 3300025298 | Ga0209050_1010591 | Ga0209050_10105912 | 484 |
| 96 | 3300025303 | Ga0209051_1002368 | Ga0209051_10023688 | 484 |
| 97 | 3300025304 | Ga0209257_1000481 | Ga0209257_100048115 | 484 |
| 98 | 3300025304 | Ga0209257_1000865 | Ga0209257_10008657 | 484 |
| 99 | 3300025304 | Ga0209257_1001289 | Ga0209257_100128913 | 484 |
| 100 | 3300025932 | Ga0207690_10002500 | Ga0207690_1000250010 | 484 |
| 101 | 3300025945 | Ga0207679_10036373 | Ga0207679_100363733 | 484 |
| 102 | 3300028794 | Ga0307515_10074766 | Ga0307515_100747664 | 484 |
| 103 | 3300031251 | Ga0265327_10003957 | Ga0265327_100039572 | 484 |
| 104 | 3300032004 | Ga0307414_10039258 | Ga0307414_100392582 | 484 |
| 105 | 3300032004 | Ga0307414_10053413 | Ga0307414_100534132 | 484 |
| 106 | 3300037312 | Ga0395899_0091940 | Ga0395899_0091940_177_1703 | 484 |
| 107 | 3300037418 | Ga0395900_0133137 | Ga0395900_0133137_14_1540 | 484 |
| 108 | 3300037466 | Ga0395898_0031458 | Ga0395898_0031458_2481_4007 | 484 |
| 109 | 3300038443 | Ga0395901_0023852 | Ga0395901_0023852_2884_4410 | 484 |
| 110 | 3300039438 | Ga0436360_0100898 | Ga0436360_0100898_55_1593 | 484 |
| 111 | 3300039447 | Ga0436361_0663447 | Ga0436361_0663447_3340_4875 | 484 |
| 112 | 3300046460 | Ga0495638_0000492 | Ga0495638_0000492_38884_40371 | 484 |
| 113 | 3300046460 | Ga0495638_0001901 | Ga0495638_0001901_8842_10329 | 484 |
| 114 | 3300046471 | Ga0495650_0000007 | Ga0495650_0000007_203161_204648 | 484 |
| 115 | 3300046506 | Ga0495583_0000037 | Ga0495583_0000037_110154_111641 | 484 |
| 116 | 3300046507 | Ga0495606_0002879 | Ga0495606_0002879_8504_9991 | 484 |
| 117 | 3300046512 | Ga0495610_0002156 | Ga0495610_0002156_8012_9499 | 484 |
| 118 | 3300046513 | Ga0495616_0000112 | Ga0495616_0000112_33987_35474 | 484 |
| 119 | 3300046519 | Ga0495632_0018802 | Ga0495632_0018802_1178_2665 | 484 |
| 120 | 3300046530 | Ga0495654_0000100 | Ga0495654_0000100_18329_19816 | 484 |
| 121 | 3300046616 | Ga0495668_0000252 | Ga0495668_0000252_26750_28252 | 484 |
| 122 | 3300046660 | Ga0495625_0001571 | Ga0495625_0001571_6744_8231 | 484 |
| 123 | 3300046660 | Ga0495625_0009424 | Ga0495625_0009424_1690_3177 | 484 |
| 124 | 3300046660 | Ga0495625_0033322 | Ga0495625_0033322_1284_2771 | 484 |
| 125 | 3300046689 | Ga0495613_0002661 | Ga0495613_0002661_9956_11452 | 484 |
| 126 | 3300047320 | Ga0495672_0003286 | Ga0495672_0003286_4508_5995 | 484 |
| 127 | 3300047472 | Ga0495686_0003246 | Ga0495686_0003246_6879_8366 | 484 |
| 128 | 3300048909 | Ga0496106_0048816 | Ga0496106_0048816_680_2167 | 484 |
| 129 | 3300048910 | Ga0496107_0000156 | Ga0496107_0000156_26857_28344 | 484 |
| 130 | 3300048918 | Ga0496115_0001997 | Ga0496115_0001997_11344_12831 | 484 |
| 131 | 3300048918 | Ga0496115_0030651 | Ga0496115_0030651_2295_3803 | 484 |
| 132 | 3300048924 | Ga0496121_0000802 | Ga0496121_0000802_45480_46967 | 484 |
| 133 | 3300050493 | nmdc:mga0k408_68181_c1 | nmdc:mga0k408_68181_c1_175_1665 | 484 |
| 134 | 3300053087 | Ga0500643_002713 | Ga0500643_002713_720_2231 | 484 |
| 135 | 3300053093 | Ga0500651_0002118 | Ga0500651_0002118_2460_3968 | 484 |
| 136 | 3300053102 | Ga0500554_001223 | Ga0500554_001223_929_2416 | 484 |
| 137 | 3300053122 | Ga0500608_000307 | Ga0500608_000307_8847_10349 | 484 |
| 138 | 3300053125 | Ga0500618_000043 | Ga0500618_000043_101907_103394 | 484 |
| 139 | 3300053134 | Ga0500658_0007851 | Ga0500658_0007851_17_1504 | 484 |
| 140 | 3300053136 | Ga0500559_0000327 | Ga0500559_0000327_25021_26508 | 484 |
| 141 | 3300053136 | Ga0500559_0003753 | Ga0500559_0003753_1201_2703 | 484 |
| 142 | 3300053153 | Ga0500616_0007421 | Ga0500616_0007421_1427_2914 | 484 |
| 143 | 3300053730 | Ga0500645_001971 | Ga0500645_001971_5480_6967 | 484 |
| 144 | 3300053731 | Ga0500609_000097 | Ga0500609_000097_5971_7458 | 484 |
| 145 | iso_pu_bacteria | 2582581280 | 2585154057 | 484 |
| 146 | iso_pu_bacteria | 2582581293 | 2585197453 | 484 |
| 147 | iso_pu_bacteria | 2585428106 | 2587916279 | 484 |
| 148 | iso_pu_bacteria | 2643221545 | 2643747591 | 484 |
| 149 | iso_pu_bacteria | 2643221552 | 2643778566 | 484 |
| 150 | iso_pu_bacteria | 2643221574 | 2643884875 | 484 |
| 151 | iso_pu_bacteria | 2643221584 | 2643931278 | 484 |
| 152 | iso_pu_bacteria | 2643221640 | 2644226213 | 484 |
| 153 | iso_pu_bacteria | 2643221642 | 2644235701 | 484 |
| 154 | iso_pu_bacteria | 2643221663 | 2644352201 | 484 |
| 155 | iso_pu_bacteria | 2643221691 | 2644509413 | 484 |
| 156 | iso_pu_bacteria | 2643221699 | 2644547327 | 484 |
| 157 | iso_pu_bacteria | 2643221699 | 2644549749 | 484 |
| 158 | iso_pu_bacteria | 2791355048 | 2792463771 | 484 |
| 159 | iso_pu_bacteria | 2818991435 | 2819535872 | 484 |
| 160 | iso_pu_bacteria | 2818991454 | 2819646104 | 484 |
| 161 | iso_pu_bacteria | 2843744320 | 2843747868 | 484 |
| 162 | iso_pu_bacteria | 2849560528 | 2849560558 | 484 |
| 163 | iso_pu_bacteria | 2849573788 | 2849577076 | 484 |
| 164 | iso_pu_bacteria | 2851153111 | 2851153711 | 484 |
| 165 | iso_pu_bacteria | 2857504554 | 2857506415 | 484 |
| 166 | iso_pu_bacteria | 2884960567 | 2884964402 | 484 |
| 167 | iso_pu_bacteria | 2898329390 | 2898329613 | 484 |
| 168 | iso_pu_bacteria | 2928531327 | 2928533573 | 484 |
| 169 | 3300006186 | Ga0075369_10004212 | Ga0075369_100042123 | 485 |
| 170 | 3300014325 | Ga0163163_10089357 | Ga0163163_100893572 | 485 |
| 171 | 3300028794 | Ga0307515_10080289 | Ga0307515_100802893 | 485 |
| 172 | 3300028800 | Ga0265338_10016213 | Ga0265338_100162133 | 485 |
| 173 | 3300028800 | Ga0265338_10019036 | Ga0265338_100190366 | 485 |
| 174 | 3300031711 | Ga0265314_10008050 | Ga0265314_100080505 | 485 |
| 175 | 3300039447 | Ga0436361_0412336 | Ga0436361_0412336_3947_5449 | 485 |
| 176 | 3300046460 | Ga0495638_0000347 | Ga0495638_0000347_43754_45244 | 485 |
| 177 | 3300046460 | Ga0495638_0031762 | Ga0495638_0031762_1654_3144 | 485 |
| 178 | 3300046518 | Ga0495631_0003499 | Ga0495631_0003499_4653_6143 | 485 |
| 179 | 3300046520 | Ga0495637_0011969 | Ga0495637_0011969_474_1964 | 485 |
| 180 | 3300046524 | Ga0495648_0000777 | Ga0495648_0000777_7422_8912 | 485 |
| 181 | 3300047469 | Ga0495673_0000186 | Ga0495673_0000186_93833_95323 | 485 |
| 182 | 3300047472 | Ga0495686_0000572 | Ga0495686_0000572_6503_7993 | 485 |
| 183 | 3300049459 | Ga0495678_003760 | Ga0495678_003760_6398_7888 | 485 |
| 184 | 3300053086 | Ga0500578_0000092 | Ga0500578_0000092_70538_72028 | 485 |
| 185 | 3300053088 | Ga0500644_0001718 | Ga0500644_0001718_1315_2805 | 485 |
| 186 | 3300053118 | Ga0500594_0000055 | Ga0500594_0000055_5976_7466 | 485 |
| 187 | 3300053138 | Ga0500564_000178 | Ga0500564_000178_9411_10901 | 485 |
| 188 | 3300053156 | Ga0500622_0000047 | Ga0500622_0000047_6988_8478 | 485 |
| 189 | iso_pu_bacteria | 2510917020 | 2511121852 | 485 |
| 190 | iso_pu_bacteria | 2582581279 | 2585149548 | 485 |
| 191 | iso_pu_bacteria | 2643221583 | 2643924978 | 485 |
| 192 | 3300003320 | rootH2_10037333 | rootH2_100373333 | 486 |
| 193 | 3300003323 | rootH1_10010591 | rootH1_100105913 | 486 |
| 194 | 3300044656 | Ga0466969_0006122 | Ga0466969_0006122_3113_4579 | 486 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8gtz-assembly1.cif.gz_A | crystal structure of exopolyphosphatase (ppx) mutant e137a from zymomonas mobilis in complex with magnesium ions | 0.9259 | 4 | 486 |
| 8gtz-assembly1.cif.gz_A | crystal structure of exopolyphosphatase (ppx) mutant e137a from zymomonas mobilis in complex with magnesium ions | 0.922 | 4 | 486 |
| 3hi0-assembly1.cif.gz_A | crystal structure of putative exopolyphosphatase (17739545) from agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution | 0.9215 | 2 | 484 |
| 3hi0-assembly1.cif.gz_B | crystal structure of putative exopolyphosphatase (17739545) from agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution | 0.92 | 3 | 484 |
| 3hi0-assembly1.cif.gz_A | crystal structure of putative exopolyphosphatase (17739545) from agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution | 0.9142 | 2 | 484 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3hi0B01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9283 | 3 | 108 | 3.30.420.40 |
| 3mdqA01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.908 | 4 | 108 | 3.30.420.40 |
| 1t6dB01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9076 | 4 | 108 | 3.30.420.40 |
| 3cerE01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9064 | 4 | 114 | 3.30.420.40 |
| af_P9WHV5_1_122_3.30.420.40 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9047 | 4 | 110 | 3.30.420.40 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A258BEW5-F1-model_v4 | Exopolyphosphatase | 0.9864 | 2 | 426 |
GO:0016462
|
| AF-A0A3B9BPF6-F1-model_v4 | Exopolyphosphatase | 0.9677 | 3 | 160 |
GO:0016462
|
| AF-A0A3D5USV0-F1-model_v4 | exopolyphosphatase (EC 3.6.1.11) | 0.9664 | 3 | 319 |
GO:0004309
GO:0006793 |
| AF-A0A3C2E8X6-F1-model_v4 | Ppx/GppA family phosphatase | 0.9655 | 18 | 127 |
GO:0016462
|
| AF-A0A4Q3CUD5-F1-model_v4 | Ppx/GppA family phosphatase | 0.9637 | 2 | 145 |
GO:0006357
|
Predicted Structure (AlphaFold2)
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