F298701

General Info

Members Datasets Scaffolds Average Seq Length
194 159 161 472

Family's Representative Sequence

Representative Sequence 3300017792|Ga0163161_10002676|Ga0163161_100026767
Length 516
Sequence MTVAVEDSPVIDTANTLDQQRRAFLNDGPPGLKRRRANLVKLRAVVLAHRREIEDAISTDFGNRSRHETDIMELLGVVQSIDYLLRHLRRFMKPERRHVAAFHRTGRAYVEYQPKGVIGVMAPWNYPFSLTFIPLATALAAGNRVMIKPSELTPRTSELIQRMLASCFSDDEVAVVLGGPETGAYFSGLPFDHLLFTGSTQVGRMVMRAASENLVPLTLELGGKSPVVVAPGHAGRSALESIVFGKLSNAGQTCVAPDYALVHEDDLGEFITQYRDAVARSYPQGPTSPDYTSIISDRHYMRLHTLIKDARAKGAGVIEVGVTPERAAERPRTLAPVLIVGAEDDALVMQEEIFGPLLPVRTYRSLDEVIDYINARPRPLALYYFGNMDADSEAVIKRTTSGNVGINNTLLHVAVDDLPFGGVGPSGMGAYHGIEGFRSMSHAKGVFVQGRWSLPSMLRAPFGKLAEFAISITLRARHNSKSSGRGSTPAPSCFSPLADPLRRYCVSPRWVANEVR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2508501050 Microvirga lupini Lut6 Isolate Nodule
3 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
4 2511231017 Pseudomonas sp. GM55 Isolate Nodule
5 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
6 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
7 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
8 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
9 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
10 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
11 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
12 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
13 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
14 2818991452 Burkholderia cepacia 561 Isolate Unclassified
15 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
16 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
17 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
18 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
19 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
20 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
21 2928170801 Burkholderia sp. 572 Isolate Unclassified
22 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
23 2937967321 Serratia sp. YC16 Isolate Unclassified
24 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
25 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
26 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
27 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
28 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
29 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
30 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
31 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
32 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
33 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
34 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
35 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
36 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
37 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
38 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
39 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
40 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
41 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
42 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
49 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
53 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
69 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
72 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
101 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
140 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
144 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
145 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
147 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
148 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
149 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
150 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
151 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
152 8004592986 Serratia sp. S119 Isolate Unclassified
153 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
154 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
155 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
156 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
157 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
158 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
159 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.99
Metatranscriptomes 0
Isolates 17.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.23
Nodule 9.28
Rhizoplane 6.7
Rhizosphere 46.91
Stem 0
Stem Tuber 0
Unclassified 12.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_909002 2162886007 Bacteria 18869
2 JGI25162J39368_1001280 3300002737 Bacteria 14278
3 JGI25164J39214_1000349 3300002772 Bacteria 28764
4 JGI25165J46597_1001809 3300003214 Bacteria 9003
5 JGI25160J50197_1000774 3300003354 Bacteria 17157
6 Ga0055532_1000114 3300003758 Bacteria 85635
7 Ga0055532_1000237 3300003758 Bacteria 40420
8 Ga0055527_1000040 3300003760 Bacteria 118145
9 Ga0055535_1000036 3300003761 Bacteria 162035
10 Ga0055542_1000061 3300003762 Bacteria 162035
11 Ga0055529_1000069 3300003763 Bacteria 162035
12 Ga0055524_1000242 3300003775 Bacteria 57160
13 Ga0055528_1002302 3300003790 Bacteria 10345
14 Ga0055540_1000011 3300003792 Bacteria 282927
15 Ga0058692_1000051 3300003856 Bacteria 107880
16 Ga0065165_1000001 3300005262 Bacteria 494087
17 Ga0065165_1002238 3300005262 Bacteria 17195
18 Ga0065165_1003002 3300005262 Bacteria 12769
19 Ga0065704_10000292 3300005289 Bacteria 38314
20 Ga0070667_100007401 3300005367 Bacteria 9121
21 Ga0070698_100001243 3300005471 Bacteria 28426
22 Ga0070698_100191246 3300005471 Bacteria 1984
23 Ga0068853_100115295 3300005539 Bacteria 2391
24 Ga0068855_100006151 3300005563 Bacteria 14634
25 Ga0068855_100037358 3300005563 Bacteria 5776
26 Ga0068856_100006938 3300005614 Bacteria 11077
27 Ga0068856_100084279 3300005614 Bacteria 3157
28 Ga0068859_100095732 3300005617 Bacteria 3021
29 Ga0068860_100010020 3300005843 Bacteria 9394
30 Ga0081538_10017729 3300005981 Bacteria 5386
31 Ga0070717_10017301 3300006028 Bacteria 5608
32 Ga0075429_100060559 3300006880 Bacteria 3297
33 Ga0097620_100095735 3300006931 Bacteria 3021
34 Ga0105251_10004224 3300009011 Bacteria 9930
35 Ga0105244_10000176 3300009036 Bacteria 64935
36 Ga0105240_10010061 3300009093 Bacteria 13317
37 Ga0105240_10011538 3300009093 Bacteria 12298
38 Ga0105240_10035025 3300009093 Bacteria 6473
39 Ga0114129_10220644 3300009147 Bacteria 2558
40 Ga0105241_10032256 3300009174 Bacteria 3926
41 Ga0105241_10041089 3300009174 Bacteria 3492
42 Ga0105238_10194904 3300009551 Bacteria 2002
43 Ga0105239_10000337 3300010375 Bacteria 68698
44 Ga0105239_10098509 3300010375 Bacteria 3232
45 Ga0157375_10009201 3300013308 Bacteria 8660
46 Ga0163163_10001211 3300014325 Bacteria 21825
47 Ga0183362_10013 3300015683 Bacteria 44128
48 Ga0163161_10002676 3300017792 Bacteria 12659
49 Ga0209566_100274 3300025225 Bacteria 48108
50 Ga0209672_100035 3300025228 Bacteria 303111
51 Ga0209147_100037 3300025229 Bacteria 326977
52 Ga0209147_100041 3300025229 Bacteria 303111
53 Ga0209563_100414 3300025230 Bacteria 15090
54 Ga0207427_100044 3300025231 Bacteria 242623
55 Ga0209437_100005 3300025233 Bacteria 1071596
56 Ga0209258_100029 3300025242 Bacteria 490648
57 Ga0209258_100063 3300025242 Bacteria 303577
58 Ga0209148_1000088 3300025254 Bacteria 258188
59 Ga0209148_1000163 3300025254 Bacteria 137449
60 Ga0209233_1000011 3300025261 Bacteria 1071611
61 Ga0209565_1009596 3300025263 Bacteria 2444
62 Ga0209455_1000075 3300025272 Bacteria 285430
63 Ga0209673_1000061 3300025273 Bacteria 262274
64 Ga0209050_1000416 3300025298 Bacteria 78976
65 Ga0209256_1000092 3300025299 Bacteria 210547
66 Ga0207426_1000103 3300025302 Bacteria 250320
67 Ga0207426_1020697 3300025302 Bacteria 2283
68 Ga0209051_1000020 3300025303 Bacteria 508628
69 Ga0209257_1000085 3300025304 Bacteria 291117
70 Ga0207655_1000330 3300025728 Bacteria 69204
71 Ga0207713_1019839 3300025735 Bacteria 3275
72 Ga0207654_10011029 3300025911 Bacteria 4599
73 Ga0207654_10040551 3300025911 Bacteria 2624
74 Ga0207695_10001774 3300025913 Bacteria 34048
75 Ga0207695_10006932 3300025913 Bacteria 14559
76 Ga0207695_10031512 3300025913 Bacteria 5811
77 Ga0207644_10063954 3300025931 Bacteria 2673
78 Ga0207667_10021201 3300025949 Bacteria 7204
79 Ga0207667_10034214 3300025949 Bacteria 5459
80 Ga0207651_10052784 3300025960 Bacteria 2774
81 Ga0207668_10125947 3300025972 Bacteria 1948
82 Ga0207658_10037144 3300025986 Bacteria 3497
83 Ga0207677_10003154 3300026023 Bacteria 8702
84 Ga0207639_10102362 3300026041 Bacteria 2318
85 Ga0207702_10052703 3300026078 Bacteria 3443
86 Ga0209371_1000008 3300027312 Bacteria 1024606
87 Ga0268266_10042077 3300028379 Bacteria 3900
88 Ga0268264_10007552 3300028381 Bacteria 9070
89 Ga0268256_1000009 3300030500 Bacteria 1022625
90 Ga0265327_10000841 3300031251 Bacteria 45822
91 Ga0307408_100019110 3300031548 Bacteria 4611
92 Ga0307408_100021225 3300031548 Bacteria 4393
93 Ga0316576_10015123 3300031727 Bacteria 5170
94 Ga0316576_10028997 3300031727 Bacteria 3907
95 Ga0307405_10066387 3300031731 Bacteria 2300
96 Ga0316577_10025829 3300031733 Bacteria 3267
97 Ga0373946_0048097 3300035171 Bacteria 1774
98 Ga0316574_0073983 3300035398 Bacteria 2155
99 Ga0373931_0002036 3300035691 Bacteria 8894
100 Ga0316584_0154350 3300036712 Bacteria 1708
101 Ga0395900_0147905 3300037418 Bacteria 2401
102 Ga0237819_01075 3300038705 Bacteria 8087
103 Ga0436361_1002489 3300039447 Bacteria 5106
104 Ga0451577_0025358 3300042876 Bacteria 5380
105 Ga0466969_0062406 3300044656 Bacteria 1808
106 Ga0466966_0029894 3300044684 Bacteria 3542
107 Ga0466959_0000738 3300045049 Bacteria 19122
108 Ga0495639_0000023 3300046475 Bacteria 70927
109 Ga0495594_0002158 3300046499 Bacteria 10241
110 Ga0495622_0000135 3300046557 Bacteria 63001
111 Ga0495661_0001847 3300046665 Bacteria 16912
112 Ga0496101_0105814 3300048904 Bacteria 2112
113 Ga0496104_0049274 3300048907 Bacteria 3972
114 Ga0496105_0000845 3300048908 Bacteria 20862
115 Ga0496109_0077475 3300048912 Bacteria 3059
116 Ga0496109_0083414 3300048912 Bacteria 2947
117 Ga0496110_0008422 3300048913 Bacteria 8297
118 Ga0496110_0057012 3300048913 Bacteria 3438
119 Ga0496111_0008210 3300048914 Bacteria 6901
120 Ga0496112_0043679 3300048915 Bacteria 4388
121 Ga0496113_0087282 3300048916 Bacteria 2398
122 Ga0496114_0002518 3300048917 Bacteria 13992
123 Ga0496115_0001909 3300048918 Bacteria 14878
124 Ga0496119_0000582 3300048922 Bacteria 49332
125 Ga0496119_0000900 3300048922 Bacteria 38780
126 Ga0496120_0000287 3300048923 Bacteria 84850
127 Ga0496120_0000364 3300048923 Bacteria 73688
128 Ga0496122_0000988 3300048925 Bacteria 50798
129 Ga0496122_0005385 3300048925 Bacteria 15275
130 Ga0496123_0000198 3300048926 Bacteria 122508
131 Ga0496123_0004257 3300048926 Bacteria 15237
132 Ga0496123_0054392 3300048926 Bacteria 2636
133 Ga0496124_0001050 3300048927 Bacteria 43582
134 Ga0496124_0001655 3300048927 Bacteria 31821
135 Ga0496124_0001884 3300048927 Bacteria 28875
136 Ga0496125_0009473 3300048928 Bacteria 9998
137 Ga0496125_0092326 3300048928 Bacteria 2264
138 Ga0496126_0001707 3300048929 Bacteria 32618
139 Ga0496126_0046092 3300048929 Bacteria 4002
140 Ga0501033_0142868 3300049570 Bacteria 1730
141 Ga0501036_0029826 3300049572 Bacteria 4610
142 Ga0501040_0002136 3300049576 Bacteria 12755
143 Ga0501040_0140017 3300049576 Bacteria 1704
144 Ga0501041_0135007 3300049577 Bacteria 1537
145 Ga0501041_0153666 3300049577 Bacteria 1438
146 Ga0501048_0026776 3300049582 Bacteria 4197
147 Ga0501048_0136332 3300049582 Bacteria 1735
148 Ga0501074_0137958 3300049590 Bacteria 1745
149 Ga0501264_000089 3300049761 Bacteria 13256
150 nmdc:mga03683_33424_c1 3300050489 Bacteria 2075
151 nmdc:mga05p37_18005_c1 3300050507 Bacteria 8531
152 nmdc:mga0qj67_176694_c1 3300050509 Unclassified 1734
153 Ga0500643_002006 3300053087 Bacteria 10958
154 Ga0500641_0000190 3300053096 Bacteria 23143
155 Ga0500600_0042312 3300053149 Bacteria 2625
156 Ga0500616_0000791 3300053153 Bacteria 36278
157 Ga0500636_0000048 3300053177 Bacteria 57866
158 Ga0500636_0011611 3300053177 Bacteria 5156
159 Ga0500637_0000199 3300053178 Bacteria 22445
160 Ga0500625_007034 3300053729 Bacteria 4851
161 Ga0500565_000921 3300053734 Bacteria 1807

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049582 Ga0501048_0136332 Ga0501048_0136332_225_1403 392
2 3300005981 Ga0081538_10017729 Ga0081538_100177295 398
3 3300049590 Ga0501074_0137958 Ga0501074_0137958_437_1687 415
4 3300044656 Ga0466969_0062406 Ga0466969_0062406_79_1344 417
5 3300005471 Ga0070698_100191246 Ga0070698_1001912462 422
6 3300005367 Ga0070667_100007401 Ga0070667_1000074017 427
7 3300005843 Ga0068860_100010020 Ga0068860_1000100207 427
8 3300025986 Ga0207658_10037144 Ga0207658_100371442 427
9 3300028381 Ga0268264_10007552 Ga0268264_100075526 427
10 3300049577 Ga0501041_0153666 Ga0501041_0153666_127_1410 427
11 3300049570 Ga0501033_0142868 Ga0501033_0142868_217_1599 438
12 3300049572 Ga0501036_0029826 Ga0501036_0029826_3170_4552 438
13 3300049576 Ga0501040_0002136 Ga0501040_0002136_3133_4515 438
14 3300049576 Ga0501040_0140017 Ga0501040_0140017_251_1633 438
15 3300049577 Ga0501041_0135007 Ga0501041_0135007_134_1516 438
16 3300005563 Ga0068855_100006151 Ga0068855_10000615111 440
17 3300025949 Ga0207667_10021201 Ga0207667_100212012 440
18 3300053734 Ga0500565_000921 Ga0500565_000921_249_1676 440
19 3300049582 Ga0501048_0026776 Ga0501048_0026776_1727_3109 447
20 3300039447 Ga0436361_1002489 Ga0436361_1002489_542_1933 452
21 3300014325 Ga0163163_10001211 Ga0163163_1000121111 453
22 3300035171 Ga0373946_0048097 Ga0373946_0048097_20_1468 453
23 3300048904 Ga0496101_0105814 Ga0496101_0105814_160_1608 453
24 3300048907 Ga0496104_0049274 Ga0496104_0049274_1675_3123 453
25 3300048908 Ga0496105_0000845 Ga0496105_0000845_9042_10490 453
26 3300048912 Ga0496109_0077475 Ga0496109_0077475_1033_2481 453
27 3300048913 Ga0496110_0008422 Ga0496110_0008422_6223_7671 453
28 3300048914 Ga0496111_0008210 Ga0496111_0008210_553_2001 453
29 3300048915 Ga0496112_0043679 Ga0496112_0043679_443_1891 453
30 3300048918 Ga0496115_0001909 Ga0496115_0001909_3182_4630 453
31 3300009093 Ga0105240_10010061 Ga0105240_100100616 454
32 3300025913 Ga0207695_10031512 Ga0207695_100315123 454
33 3300044684 Ga0466966_0029894 Ga0466966_0029894_546_1922 454
34 3300042876 Ga0451577_0025358 Ga0451577_0025358_2823_4205 459
35 3300053153 Ga0500616_0000791 Ga0500616_0000791_30270_31694 460
36 3300009036 Ga0105244_10000176 Ga0105244_100001766 462
37 3300025728 Ga0207655_1000330 Ga0207655_100033051 462
38 3300045049 Ga0466959_0000738 Ga0466959_0000738_13719_15119 462
39 3300048929 Ga0496126_0001707 Ga0496126_0001707_19650_21122 462
40 iso_pu_bacteria 8054460903 8054461794 462
41 3300009551 Ga0105238_10194904 Ga0105238_101949041 463
42 iso_pu_bacteria 2772190666 2772439818 463
43 3300038705 Ga0237819_01075 Ga0237819_01075_208_1617 464
44 3300053087 Ga0500643_002006 Ga0500643_002006_6105_7514 464
45 3300053177 Ga0500636_0011611 Ga0500636_0011611_1628_3025 464
46 3300025230 Ga0209563_100414 Ga0209563_10041410 465
47 3300048922 Ga0496119_0000582 Ga0496119_0000582_10500_11897 465
48 3300048923 Ga0496120_0000364 Ga0496120_0000364_7510_8907 465
49 iso_pu_bacteria 3005718088 3005719928 465
50 3300005262 Ga0065165_1000001 Ga0065165_1000001352 466
51 3300025302 Ga0207426_1020697 Ga0207426_10206972 466
52 3300048922 Ga0496119_0000900 Ga0496119_0000900_21315_22718 467
53 3300048923 Ga0496120_0000287 Ga0496120_0000287_59138_60541 467
54 3300048927 Ga0496124_0001050 Ga0496124_0001050_22615_24018 467
55 iso_pu_bacteria 2643221628 2644159104 468
56 3300005471 Ga0070698_100001243 Ga0070698_10000124312 469
57 3300005617 Ga0068859_100095732 Ga0068859_1000957323 469
58 3300006880 Ga0075429_100060559 Ga0075429_1000605592 469
59 3300006931 Ga0097620_100095735 Ga0097620_1000957353 469
60 3300048925 Ga0496122_0005385 Ga0496122_0005385_10172_11584 469
61 3300048926 Ga0496123_0004257 Ga0496123_0004257_3662_5074 469
62 3300048928 Ga0496125_0092326 Ga0496125_0092326_542_1954 469
63 3300050509 nmdc:mga0qj67_176694_c1 nmdc:mga0qj67_176694_c1_97_1509 469
64 3300053177 Ga0500636_0000048 Ga0500636_0000048_1697_3133 469
65 3300005539 Ga0068853_100115295 Ga0068853_1001152951 470
66 3300005563 Ga0068855_100037358 Ga0068855_1000373585 470
67 3300009093 Ga0105240_10011538 Ga0105240_100115384 470
68 3300009093 Ga0105240_10035025 Ga0105240_100350254 470
69 3300009147 Ga0114129_10220644 Ga0114129_102206442 470
70 3300009174 Ga0105241_10041089 Ga0105241_100410893 470
71 3300010375 Ga0105239_10000337 Ga0105239_100003372 470
72 3300025242 Ga0209258_100029 Ga0209258_1000295 470
73 3300025254 Ga0209148_1000163 Ga0209148_100016362 470
74 3300025911 Ga0207654_10040551 Ga0207654_100405512 470
75 3300025913 Ga0207695_10001774 Ga0207695_1000177419 470
76 3300025913 Ga0207695_10006932 Ga0207695_1000693213 470
77 3300025931 Ga0207644_10063954 Ga0207644_100639543 470
78 3300025949 Ga0207667_10034214 Ga0207667_100342146 470
79 3300025960 Ga0207651_10052784 Ga0207651_100527842 470
80 3300025972 Ga0207668_10125947 Ga0207668_101259472 470
81 3300026023 Ga0207677_10003154 Ga0207677_100031548 470
82 3300026041 Ga0207639_10102362 Ga0207639_101023621 470
83 3300031548 Ga0307408_100019110 Ga0307408_1000191103 470
84 3300049761 Ga0501264_000089 Ga0501264_000089_728_2140 470
85 3300050507 nmdc:mga05p37_18005_c1 nmdc:mga05p37_18005_c1_4145_5563 470
86 iso_pu_bacteria 2888366609 2888369934 470
87 iso_pu_bacteria 2937967321 2937968461 470
88 iso_pu_bacteria 8004592986 8004595915 470
89 iso_pu_bacteria 8015394850 8015397987 470
90 iso_pu_bacteria 2508501050 2508728700 471
91 iso_pu_bacteria 2510065019 2510135777 471
92 iso_pu_bacteria 2513237143 2513904241 471
93 iso_pu_bacteria 2513237144 2513911120 471
94 iso_pu_bacteria 2515075009 2515114953 471
95 iso_pu_bacteria 2517287029 2517409037 471
96 iso_pu_bacteria 2585427633 2585998539 471
97 iso_pu_bacteria 2841734538 2841734711 471
98 iso_pu_bacteria 2871474448 2871476400 471
99 iso_pu_bacteria 2937836603 2937842848 471
100 iso_pu_bacteria 2958071322 2958074849 471
101 iso_pu_bacteria 8004633249 8004637575 471
102 iso_pu_bacteria 8005460587 8005465648 471
103 iso_pu_bacteria 8006994254 8006996853 471
104 3300005614 Ga0068856_100006938 Ga0068856_1000069385 472
105 3300005614 Ga0068856_100084279 Ga0068856_1000842792 472
106 3300006028 Ga0070717_10017301 Ga0070717_100173017 472
107 3300009174 Ga0105241_10032256 Ga0105241_100322562 472
108 3300010375 Ga0105239_10098509 Ga0105239_100985092 472
109 3300025911 Ga0207654_10011029 Ga0207654_100110295 472
110 3300026078 Ga0207702_10052703 Ga0207702_100527033 472
111 3300053096 Ga0500641_0000190 Ga0500641_0000190_5977_7413 472
112 3300053149 Ga0500600_0042312 Ga0500600_0042312_569_1996 472
113 iso_pu_bacteria 2842324504 2842326427 472
114 iso_pu_bacteria 2842348783 2842351055 472
115 iso_pu_bacteria 2898795034 2898798271 472
116 3300031727 Ga0316576_10028997 Ga0316576_100289972 473
117 3300035691 Ga0373931_0002036 Ga0373931_0002036_5971_7392 473
118 3300048913 Ga0496110_0057012 Ga0496110_0057012_1827_3260 473
119 iso_pu_bacteria 2511231017 2511333059 473
120 iso_pu_bacteria 641228493 641334047 473
121 3300031727 Ga0316576_10015123 Ga0316576_100151232 474
122 3300031733 Ga0316577_10025829 Ga0316577_100258292 474
123 3300036712 Ga0316584_0154350 Ga0316584_0154350_79_1548 475
124 3300031548 Ga0307408_100021225 Ga0307408_1000212252 476
125 3300031731 Ga0307405_10066387 Ga0307405_100663872 476
126 3300035398 Ga0316574_0073983 Ga0316574_0073983_353_1825 476
127 3300053178 Ga0500637_0000199 Ga0500637_0000199_18271_19707 476
128 3300053729 Ga0500625_007034 Ga0500625_007034_1270_2706 476
129 3300009011 Ga0105251_10004224 Ga0105251_100042243 477
130 3300013308 Ga0157375_10009201 Ga0157375_100092013 477
131 3300025735 Ga0207713_1019839 Ga0207713_10198392 477
132 3300028379 Ga0268266_10042077 Ga0268266_100420773 477
133 3300031251 Ga0265327_10000841 Ga0265327_1000084145 477
134 3300046475 Ga0495639_0000023 Ga0495639_0000023_26473_27927 477
135 3300046499 Ga0495594_0002158 Ga0495594_0002158_5667_7121 477
136 3300046557 Ga0495622_0000135 Ga0495622_0000135_35067_36521 477
137 3300048917 Ga0496114_0002518 Ga0496114_0002518_7765_9201 477
138 3300048927 Ga0496124_0001884 Ga0496124_0001884_16724_18160 477
139 3300048929 Ga0496126_0046092 Ga0496126_0046092_186_1622 477
140 3300050489 nmdc:mga03683_33424_c1 nmdc:mga03683_33424_c1_470_1912 477
141 iso_pu_bacteria 2599185239 2599738991 477
142 iso_pu_bacteria 2818991452 2819631562 477
143 iso_pu_bacteria 2928170801 2928175963 477
144 iso_pu_bacteria 8018845410 8018847282 477
145 iso_pu_bacteria 8021120328 8021125965 477
146 3300005262 Ga0065165_1003002 Ga0065165_10030022 478
147 3300048926 Ga0496123_0054392 Ga0496123_0054392_19_1455 478
148 3300003775 Ga0055524_1000242 Ga0055524_100024243 479
149 3300025263 Ga0209565_1009596 Ga0209565_10095961 479
150 3300025299 Ga0209256_1000092 Ga0209256_100009291 479
151 3300037418 Ga0395900_0147905 Ga0395900_0147905_441_1880 479
152 3300003354 JGI25160J50197_1000774 JGI25160J50197_10007741 480
153 3300003792 Ga0055540_1000011 Ga0055540_1000011242 480
154 3300005262 Ga0065165_1002238 Ga0065165_100223819 480
155 3300015683 Ga0183362_10013 Ga0183362_1001329 480
156 3300025298 Ga0209050_1000416 Ga0209050_100041658 480
157 3300025302 Ga0207426_1000103 Ga0207426_1000103164 480
158 3300025303 Ga0209051_1000020 Ga0209051_1000020241 480
159 3300025304 Ga0209257_1000085 Ga0209257_1000085241 480
160 3300046665 Ga0495661_0001847 Ga0495661_0001847_5324_6766 480
161 3300048912 Ga0496109_0083414 Ga0496109_0083414_309_1751 480
162 3300048916 Ga0496113_0087282 Ga0496113_0087282_412_1854 480
163 3300048925 Ga0496122_0000988 Ga0496122_0000988_30452_31894 480
164 3300048926 Ga0496123_0000198 Ga0496123_0000198_5787_7229 480
165 3300048927 Ga0496124_0001655 Ga0496124_0001655_20575_22038 480
166 3300048928 Ga0496125_0009473 Ga0496125_0009473_3274_4716 480
167 iso_pu_bacteria 2511231027 2511389945 480
168 2162886007 SwRhRL2b_contig_909002 SwRhRL2b_0087.00004800 481
169 3300002737 JGI25162J39368_1001280 JGI25162J39368_100128014 481
170 3300002772 JGI25164J39214_1000349 JGI25164J39214_100034910 481
171 3300003214 JGI25165J46597_1001809 JGI25165J46597_10018093 481
172 3300003758 Ga0055532_1000114 Ga0055532_100011457 481
173 3300003758 Ga0055532_1000237 Ga0055532_100023716 481
174 3300003760 Ga0055527_1000040 Ga0055527_100004038 481
175 3300003761 Ga0055535_1000036 Ga0055535_1000036113 481
176 3300003762 Ga0055542_1000061 Ga0055542_100006148 481
177 3300003763 Ga0055529_1000069 Ga0055529_1000069113 481
178 3300003790 Ga0055528_1002302 Ga0055528_10023028 481
179 3300003856 Ga0058692_1000051 Ga0058692_100005163 481
180 3300005289 Ga0065704_10000292 Ga0065704_1000029212 481
181 3300017792 Ga0163161_10002676 Ga0163161_100026767 481
182 3300025225 Ga0209566_100274 Ga0209566_1002744 481
183 3300025228 Ga0209672_100035 Ga0209672_100035193 481
184 3300025229 Ga0209147_100037 Ga0209147_10003771 481
185 3300025229 Ga0209147_100041 Ga0209147_100041193 481
186 3300025231 Ga0207427_100044 Ga0207427_100044152 481
187 3300025233 Ga0209437_100005 Ga0209437_100005224 481
188 3300025242 Ga0209258_100063 Ga0209258_100063195 481
189 3300025254 Ga0209148_1000088 Ga0209148_1000088193 481
190 3300025261 Ga0209233_1000011 Ga0209233_1000011717 481
191 3300025272 Ga0209455_1000075 Ga0209455_100007573 481
192 3300025273 Ga0209673_1000061 Ga0209673_1000061198 481
193 3300027312 Ga0209371_1000008 Ga0209371_100000861 481
194 3300030500 Ga0268256_1000009 Ga0268256_100000961 481

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

12

446

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l1o-assembly1.cif.gz_A crystal structure of human aldh3a1 with inhibitor 1-{[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl}-1h-indole-2,3-dione 0.9575 14 463
1ad3-assembly1.cif.gz_B class 3 aldehyde dehydrogenase complex with nicotinamide-adenine-dinucleotide 0.9571 14 463
8bb8-assembly1.cif.gz_A crystal structure of human aldehyde dehydrogenase aldh3a1 in complex with octanal 0.9567 14 463
5ucd-assembly1.cif.gz_B benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with bound nadp+ and benzoate adduct 0.9525 15 448
1ad3-assembly1.cif.gz_B class 3 aldehyde dehydrogenase complex with nicotinamide-adenine-dinucleotide 0.9487 14 463
ID Description Score Start End Superfamily
af_F1LT79_6_152_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9724 77 222 3.40.605.10
af_Q2FWX9_4_206_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9716 15 216 3.40.605.10
af_A0A486WWU7_1_211_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.971 11 222 3.40.605.10
af_A0A2R8PW97_5_423_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.968 15 442 3.40.605.10
af_Q4DZ74_13_221_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.968 15 222 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A4R9YMK7-F1-model_v4 deleted 0.997 113 207
AF-A0A7X7T091-F1-model_v4 deleted 0.9805 14 474
AF-A0A165NRN3-F1-model_v4 deleted 0.9805 15 474
AF-A0A2D5EHM7-F1-model_v4 Coniferyl-aldehyde dehydrogenase 0.9799 15 320 GO:0004029
GO:0005737
GO:0006081
AF-A0A432W1Y4-F1-model_v4 Aldehyde dehydrogenase 0.9775 15 473 GO:0004029
GO:0005737
GO:0006081

Feature Viewer

pLDDT pTM Quality
92.36 0.91 High
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Predicted Structure (AlphaFold2)

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