F299012

General Info

Members Datasets Scaffolds Average Seq Length
194 129 387 549

Family's Representative Sequence

Representative Sequence 3300042531|Ga0450918_003511|Ga0450918_003511_513_2348
Length 611
Sequence MLILVELIYCILISSQSFHPFISSVTGFKTTSIIVDGIGAPVLSWKARMPATLVYHLLPDTLTEMIADISITEKSFGPKALMHGIKFSIDDGEKVGVIGRNGVGKSTLFGILAGTDKDFTGDVIYKRGTVVVATAQEHHDLGDTTVLQYVLSGLPEYPQLSHVIETYPETMGDDMKKIEEYTAALQRFDDKGFYQIEEQIERELDNFQLPGIAHRLFTSLSGGQKRLVEVVKIMHSQAHLALVDEPTNHMDFVAKQQFIDWMRTAREAMLVITHDRDVLKEVDRIVELKDGVAQSFKGNYDAYLKQNAVSTSSAMTEFEQIERRIVNLKAKVIQFRRLKEKARDPDTIKQFKRRENEAQRELETLEKIQKPTFWIDKDSAENLDYKAANRYDKFKAKNIRMNLKSDESRSKHVLVNAKDVALGYGDSVLFEGVNIDLREGEALELRGRNGAGKTTLIKALLGRDNNIVQFAGEIVLDKQMRVGMYEQEISSTYFDLQLAEAIERMYLDRNLSITNTKIRSLLNDYLFTEADGHVPLSRLSGGQKARFQLIAMLANDPQLLILDEPTNHLDLPSIEELETALKSYAGAILYVSHDGYFRQAIDGDVVYVGKK

Samples

Sample ID Description Type Environment
1 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
46 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
47 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
80 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
81 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
82 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
83 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
84 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
85 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
86 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
94 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
95 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
96 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
97 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
98 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
99 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
108 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
109 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
110 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
111 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
112 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
113 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
114 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
115 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
116 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
117 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
118 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
119 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
120 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
121 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
122 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
123 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
124 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
125 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
126 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
129 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.26
Nodule 0
Rhizoplane 1.55
Rhizosphere 70.62
Stem 0
Stem Tuber 0
Unclassified 3.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0450918_003511 3300042531 Bacteria 2910
2 JGI24740J21852_10002697 3300001979 Bacteria 7968
3 JGI24739J22299_10000857 3300001989 Bacteria 11215
4 JGI24735J21928_10000054 3300002067 Bacteria 49038
5 JGI24738J21930_10001199 3300002075 Bacteria 7263
6 rootH1_10003685 3300003316 Bacteria 49635
7 rootH1_10003685 3300003323 Bacteria 21096
8 rootH2_10011268 3300003320 Bacteria 17656
9 rootH1_10000983 3300003323 Bacteria 67573
10 rootH1_10246200 3300003323 Bacteria 3424
11 Ga0070658_10000012 3300005327 Bacteria 277871
12 Ga0070658_10000063 3300005327 Bacteria 107300
13 Ga0070658_10017907 3300005327 Bacteria 5667
14 Ga0070676_10051855 3300005328 Bacteria 2410
15 Ga0070676_10091521 3300005328 Unclassified 1864
16 Ga0070683_100000130 3300005329 Bacteria 48482
17 Ga0070683_100004853 3300005329 Bacteria 11137
18 Ga0070666_10006597 3300005335 Bacteria 7135
19 Ga0070660_100005495 3300005339 Bacteria 8781
20 Ga0070689_100056362 3300005340 Bacteria 3047
21 Ga0070661_100006621 3300005344 Bacteria 7991
22 Ga0070661_100013591 3300005344 Bacteria 5716
23 Ga0070668_100166402 3300005347 Bacteria 1792
24 Ga0070674_100010631 3300005356 Bacteria 5574
25 Ga0070673_100000025 3300005364 Bacteria 74467
26 Ga0070659_100001790 3300005366 Bacteria 15467
27 Ga0070678_100002836 3300005456 Bacteria 9587
28 Ga0070685_10000128 3300005466 Bacteria 48496
29 Ga0070684_100000268 3300005535 Bacteria 36020
30 Ga0070684_100004034 3300005535 Bacteria 11109
31 Ga0068855_100000001 3300005563 Bacteria 818777
32 Ga0068855_100000002 3300005563 Bacteria 616881
33 Ga0068855_100000050 3300005563 Bacteria 143762
34 Ga0068855_100104353 3300005563 Bacteria 3261
35 Ga0070664_100000051 3300005564 Bacteria 70646
36 Ga0068857_100000018 3300005577 Bacteria 93371
37 Ga0068857_100017872 3300005577 Bacteria 6219
38 Ga0068857_100032706 3300005577 Bacteria 4598
39 Ga0068856_100000018 3300005614 Bacteria 151165
40 Ga0068856_100001378 3300005614 Bacteria 25542
41 Ga0068856_100002398 3300005614 Bacteria 19281
42 Ga0068852_100000045 3300005616 Bacteria 88494
43 Ga0081455_10000680 3300005937 Bacteria 44122
44 Ga0075365_10000006 3300006038 Bacteria 123233
45 Ga0075365_10000026 3300006038 Bacteria 61245
46 Ga0075365_10001684 3300006038 Bacteria 10227
47 Ga0075365_10062483 3300006038 Bacteria 2491
48 Ga0075363_100007967 3300006048 Bacteria 4909
49 Ga0075364_10025148 3300006051 Bacteria 3788
50 Ga0075364_10045283 3300006051 Bacteria 2863
51 Ga0075362_10004744 3300006177 Unclassified 4910
52 Ga0075367_10015981 3300006178 Bacteria 4091
53 Ga0075366_10000761 3300006195 Bacteria 15303
54 Ga0075366_10001246 3300006195 Bacteria 12639
55 Ga0097621_100078118 3300006237 Bacteria 2749
56 Ga0075370_10002680 3300006353 Bacteria 8329
57 Ga0075370_10005035 3300006353 Bacteria 6507
58 Ga0075428_100007528 3300006844 Bacteria 12071
59 Ga0068865_100001064 3300006881 Bacteria 15799
60 Ga0105240_10000004 3300009093 Bacteria 708156
61 Ga0105240_10001718 3300009093 Bacteria 36965
62 Ga0105240_10031545 3300009093 Bacteria 6871
63 Ga0105245_10027872 3300009098 Bacteria 4978
64 Ga0105241_10000003 3300009174 Bacteria 839043
65 Ga0105241_10034232 3300009174 Unclassified 3815
66 Ga0105237_10000001 3300009545 Bacteria 1009213
67 Ga0105238_10125209 3300009551 Bacteria 2549
68 Ga0105249_10000950 3300009553 Bacteria 25626
69 Ga0105032_100003 3300009979 Bacteria 186985
70 Ga0105032_100004 3300009979 Bacteria 172013
71 Ga0105030_100222 3300009987 Bacteria 4909
72 Ga0105028_100093 3300009993 Bacteria 9426
73 Ga0105028_100723 3300009993 Bacteria 3512
74 Ga0105239_10000722 3300010375 Bacteria 46895
75 Ga0105246_10003907 3300011119 Bacteria 9028
76 Ga0105246_10004366 3300011119 Bacteria 8603
77 Ga0105246_10005353 3300011119 Bacteria 7812
78 Ga0157373_10004189 3300013100 Bacteria 10877
79 Ga0157373_10010827 3300013100 Bacteria 6713
80 Ga0157371_10005390 3300013102 Bacteria 10802
81 Ga0157370_10001979 3300013104 Bacteria 25174
82 Ga0157370_10004469 3300013104 Bacteria 16019
83 Ga0157370_10007404 3300013104 Bacteria 11954
84 Ga0157369_10000024 3300013105 Bacteria 225851
85 Ga0157369_10002733 3300013105 Bacteria 21066
86 Ga0157369_10003704 3300013105 Bacteria 18169
87 Ga0157369_10005601 3300013105 Bacteria 14584
88 Ga0157369_10006357 3300013105 Bacteria 13711
89 Ga0157374_10002360 3300013296 Bacteria 15919
90 Ga0157374_10064951 3300013296 Bacteria 3426
91 Ga0157378_10016619 3300013297 Bacteria 6446
92 Ga0157372_10000002 3300013307 Bacteria 687862
93 Ga0157372_10000008 3300013307 Bacteria 305449
94 Ga0157377_10000668 3300014745 Bacteria 14227
95 Ga0157376_10000035 3300014969 Bacteria 151993
96 Ga0207680_10000229 3300025903 Bacteria 27082
97 Ga0207647_10000001 3300025904 Bacteria 506349
98 Ga0207647_10000640 3300025904 Bacteria 27311
99 Ga0207645_10081503 3300025907 Bacteria 2074
100 Ga0207705_10000093 3300025909 Bacteria 107314
101 Ga0207705_10002835 3300025909 Bacteria 13263
102 Ga0207705_10029808 3300025909 Bacteria 3890
103 Ga0207654_10000002 3300025911 Bacteria 1460142
104 Ga0207695_10000009 3300025913 Bacteria 1034276
105 Ga0207695_10002605 3300025913 Bacteria 26438
106 Ga0207695_10034858 3300025913 Bacteria 5466
107 Ga0207671_10000003 3300025914 Bacteria 1065461
108 Ga0207657_10002779 3300025919 Bacteria 18849
109 Ga0207706_10000209 3300025933 Bacteria 64890
110 Ga0207669_10010562 3300025937 Bacteria 4449
111 Ga0207704_10000609 3300025938 Bacteria 15811
112 Ga0207661_10000118 3300025944 Bacteria 50730
113 Ga0207661_10010521 3300025944 Bacteria 6663
114 Ga0207667_10000003 3300025949 Bacteria 822935
115 Ga0207667_10000005 3300025949 Bacteria 715503
116 Ga0207667_10000096 3300025949 Bacteria 143776
117 Ga0207667_10044333 3300025949 Bacteria 4714
118 Ga0207667_10152161 3300025949 Bacteria 2381
119 Ga0207651_10000067 3300025960 Bacteria 46906
120 Ga0207712_10000664 3300025961 Bacteria 26702
121 Ga0207702_10000179 3300026078 Bacteria 76263
122 Ga0207702_10005001 3300026078 Bacteria 11650
123 Ga0207674_10000215 3300026116 Bacteria 71809
124 Ga0207674_10010439 3300026116 Bacteria 10517
125 Ga0207674_10075555 3300026116 Bacteria 3379
126 Ga0207683_10020829 3300026121 Bacteria 5609
127 Ga0207698_10000165 3300026142 Bacteria 41957
128 Ga0265338_10001230 3300028800 Bacteria 42316
129 Ga0265324_10001292 3300029957 Bacteria 14694
130 Ga0314311_1185161 3300030733 Bacteria 6293
131 Ga0316179_1029172 3300030734 Bacteria 15625
132 Ga0316183_1103630 3300030742 Unclassified 2538
133 Ga0316181_1063761 3300030744 Bacteria 284591
134 Ga0316182_1038617 3300030745 Bacteria 9543
135 Ga0265332_10005144 3300031238 Bacteria 6061
136 Ga0307516_10000021 3300031730 Bacteria 192678
137 Ga0307406_10000001 3300031901 Bacteria 638191
138 Ga0307406_10000197 3300031901 Bacteria 36133
139 Ga0373959_0000004 3300034820 Bacteria 100872
140 Ga0395899_0087976 3300037312 Bacteria 2254
141 Ga0395900_0000001 3300037418 Bacteria 931146
142 Ga0395898_0000002 3300037466 Bacteria 931013
143 Ga0395901_0000072 3300038443 Bacteria 140394
144 Ga0439466_0006570 3300041411 Bacteria 4417
145 Ga0451807_0533665 3300041486 Unclassified 1832
146 Ga0439446_0000033 3300042156 Bacteria 21721
147 Ga0439434_0002164 3300042435 Bacteria 5697
148 Ga0439464_0000043 3300042439 Bacteria 16217
149 Ga0466965_0000136 3300044683 Bacteria 21041
150 Ga0466963_0058416 3300044694 Bacteria 2572
151 Ga0453684_0014122 3300044712 Bacteria 12839
152 Ga0495638_0000245 3300046460 Bacteria 74379
153 Ga0495638_0000682 3300046460 Bacteria 36908
154 Ga0495660_0000175 3300046810 Bacteria 69454
155 Ga0495686_0032587 3300047472 Unclassified 3371
156 Ga0496100_0002669 3300048903 Bacteria 9091
157 Ga0496115_0000001 3300048918 Bacteria 367230
158 Ga0501034_0000090 3300049571 Bacteria 165117
159 Ga0501037_0000001 3300049573 Bacteria 753276
160 nmdc:mga03683_3740_c1 3300050489 Unclassified 4961
161 nmdc:mga03683_48096_c1 3300050489 Bacteria 1772
162 nmdc:mga00v17_101_c1 3300050491 Bacteria 50798
163 nmdc:mga00v17_20626_c1 3300050491 Bacteria 3778
164 nmdc:mga0yw44_15_c1 3300050492 Bacteria 28425
165 nmdc:mga0yw44_1_c1 3300050492 Bacteria 702221
166 nmdc:mga0yw44_2824_c1 3300050492 Bacteria 7537
167 nmdc:mga0yw44_66309_c1 3300050492 Bacteria 2227
168 nmdc:mga0yw44_6_c1 3300050492 Bacteria 272478
169 nmdc:mga0k408_1035_c1 3300050493 Bacteria 15259
170 nmdc:mga0k408_24002_c1 3300050493 Bacteria 3444
171 nmdc:mga06z11_284_c1 3300050494 Bacteria 19699
172 nmdc:mga07m45_978_c1 3300050496 Bacteria 12578
173 Ga0500643_000011 3300053087 Bacteria 385630
174 Ga0500643_000133 3300053087 Bacteria 75773
175 Ga0500643_003993 3300053087 Bacteria 6820
176 Ga0500646_0000001 3300053090 Bacteria 273936
177 Ga0500583_0001700 3300053092 Bacteria 6430
178 Ga0500651_0000001 3300053093 Bacteria 529808
179 Ga0500641_0000001 3300053096 Bacteria 1115973
180 Ga0500555_000001 3300053103 Bacteria 1353713
181 Ga0500555_000005 3300053103 Bacteria 342334
182 Ga0500562_000001 3300053108 Bacteria 1178987
183 Ga0500569_000025 3300053109 Bacteria 36908
184 Ga0500594_0000002 3300053118 Bacteria 916890
185 Ga0500594_0000004 3300053118 Bacteria 174508
186 Ga0500652_000007 3300053131 Bacteria 165913
187 Ga0500655_000216 3300053133 Bacteria 13704
188 Ga0500568_0005190 3300053139 Bacteria 6790
189 Ga0500588_0000020 3300053146 Bacteria 40592
190 Ga0500616_0000005 3300053153 Bacteria 961725
191 Ga0500616_0000012 3300053153 Bacteria 681798
192 Ga0500620_001203 3300053155 Bacteria 4630
193 Ga0500570_000006 3300053724 Bacteria 129824
194 Ga0500570_007857 3300053724 Bacteria 5866
195 Ga0450918_003511
196 JGI24740J21852_10002697
197 JGI24739J22299_10000857
198 JGI24735J21928_10000054
199 JGI24738J21930_10001199
200 rootH1_10003685
201 rootH2_10011268
202 rootH1_10000983
203 rootH1_10246200
204 Ga0070658_10000012
205 Ga0070658_10000063
206 Ga0070658_10017907
207 Ga0070676_10051855
208 Ga0070676_10091521
209 Ga0070683_100000130
210 Ga0070683_100004853
211 Ga0070666_10006597
212 Ga0070660_100005495
213 Ga0070689_100056362
214 Ga0070661_100006621
215 Ga0070661_100013591
216 Ga0070668_100166402
217 Ga0070674_100010631
218 Ga0070673_100000025
219 Ga0070659_100001790
220 Ga0070678_100002836
221 Ga0070685_10000128
222 Ga0070684_100000268
223 Ga0070684_100004034
224 Ga0068855_100000001
225 Ga0068855_100000002
226 Ga0068855_100000050
227 Ga0068855_100104353
228 Ga0070664_100000051
229 Ga0068857_100000018
230 Ga0068857_100017872
231 Ga0068857_100032706
232 Ga0068856_100000018
233 Ga0068856_100001378
234 Ga0068856_100002398
235 Ga0068852_100000045
236 Ga0081455_10000680
237 Ga0075365_10000006
238 Ga0075365_10000026
239 Ga0075365_10001684
240 Ga0075365_10062483
241 Ga0075363_100007967
242 Ga0075364_10025148
243 Ga0075364_10045283
244 Ga0075362_10004744
245 Ga0075367_10015981
246 Ga0075366_10000761
247 Ga0075366_10001246
248 Ga0097621_100078118
249 Ga0075370_10002680
250 Ga0075370_10005035
251 Ga0075428_100007528
252 Ga0068865_100001064
253 Ga0105240_10000004
254 Ga0105240_10001718
255 Ga0105240_10031545
256 Ga0105245_10027872
257 Ga0105241_10000003
258 Ga0105241_10034232
259 Ga0105237_10000001
260 Ga0105238_10125209
261 Ga0105249_10000950
262 Ga0105032_100003
263 Ga0105032_100004
264 Ga0105030_100222
265 Ga0105028_100093
266 Ga0105028_100723
267 Ga0105239_10000722
268 Ga0105246_10003907
269 Ga0105246_10004366
270 Ga0105246_10005353
271 Ga0157373_10004189
272 Ga0157373_10010827
273 Ga0157371_10005390
274 Ga0157370_10001979
275 Ga0157370_10004469
276 Ga0157370_10007404
277 Ga0157369_10000024
278 Ga0157369_10002733
279 Ga0157369_10003704
280 Ga0157369_10005601
281 Ga0157369_10006357
282 Ga0157374_10002360
283 Ga0157374_10064951
284 Ga0157378_10016619
285 Ga0157372_10000002
286 Ga0157372_10000008
287 Ga0157377_10000668
288 Ga0157376_10000035
289 Ga0207680_10000229
290 Ga0207647_10000001
291 Ga0207647_10000640
292 Ga0207645_10081503
293 Ga0207705_10000093
294 Ga0207705_10002835
295 Ga0207705_10029808
296 Ga0207654_10000002
297 Ga0207695_10000009
298 Ga0207695_10002605
299 Ga0207695_10034858
300 Ga0207671_10000003
301 Ga0207657_10002779
302 Ga0207706_10000209
303 Ga0207669_10010562
304 Ga0207704_10000609
305 Ga0207661_10000118
306 Ga0207661_10010521
307 Ga0207667_10000003
308 Ga0207667_10000005
309 Ga0207667_10000096
310 Ga0207667_10044333
311 Ga0207667_10152161
312 Ga0207651_10000067
313 Ga0207712_10000664
314 Ga0207702_10000179
315 Ga0207702_10005001
316 Ga0207674_10000215
317 Ga0207674_10010439
318 Ga0207674_10075555
319 Ga0207683_10020829
320 Ga0207698_10000165
321 Ga0265338_10001230
322 Ga0265324_10001292
323 Ga0314311_1185161
324 Ga0316179_1029172
325 Ga0316183_1103630
326 Ga0316181_1063761
327 Ga0316182_1038617
328 Ga0265332_10005144
329 Ga0307516_10000021
330 Ga0307406_10000001
331 Ga0307406_10000197
332 Ga0373959_0000004
333 Ga0395899_0087976
334 Ga0395900_0000001
335 Ga0395898_0000002
336 Ga0395901_0000072
337 Ga0439466_0006570
338 Ga0451807_0533665
339 Ga0439446_0000033
340 Ga0439434_0002164
341 Ga0439464_0000043
342 Ga0466965_0000136
343 Ga0466963_0058416
344 Ga0453684_0014122
345 Ga0495638_0000245
346 Ga0495638_0000682
347 Ga0495660_0000175
348 Ga0495686_0032587
349 Ga0496100_0002669
350 Ga0496115_0000001
351 Ga0501034_0000090
352 Ga0501037_0000001
353 nmdc:mga03683_3740_c1
354 nmdc:mga03683_48096_c1
355 nmdc:mga00v17_101_c1
356 nmdc:mga00v17_20626_c1
357 nmdc:mga0yw44_15_c1
358 nmdc:mga0yw44_1_c1
359 nmdc:mga0yw44_2824_c1
360 nmdc:mga0yw44_66309_c1
361 nmdc:mga0yw44_6_c1
362 nmdc:mga0k408_1035_c1
363 nmdc:mga0k408_24002_c1
364 nmdc:mga06z11_284_c1
365 nmdc:mga07m45_978_c1
366 Ga0500643_000011
367 Ga0500643_000133
368 Ga0500643_003993
369 Ga0500646_0000001
370 Ga0500583_0001700
371 Ga0500651_0000001
372 Ga0500641_0000001
373 Ga0500555_000001
374 Ga0500555_000005
375 Ga0500562_000001
376 Ga0500569_000025
377 Ga0500594_0000002
378 Ga0500594_0000004
379 Ga0500652_000007
380 Ga0500655_000216
381 Ga0500568_0005190
382 Ga0500588_0000020
383 Ga0500616_0000005
384 Ga0500616_0000012
385 Ga0500620_001203
386 Ga0500570_000006
387 Ga0500570_007857

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12848

ABC_tran_Xtn

ABC transporter

286

383

0.81

PF00005

ABC_tran

ABC transporter

82

248

0.76

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

476

597

0.75

PF00005

ABC_tran

ABC transporter

430

567

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
7s5c-assembly1.cif.gz_D m. xanthus ferritin-like protein encb 0.9766 256 301
1mft-assembly1.cif.gz_A crystal structure of four-helix bundle model 0.9759 256 302
7s5c-assembly1.cif.gz_J m. xanthus ferritin-like protein encb 0.9747 253 301
7s5c-assembly1.cif.gz_F m. xanthus ferritin-like protein encb 0.9699 255 301
7vzg-assembly1.cif.gz_D structure of the acidobacteria homodimeric reaction center bound with cytochrome c (the larger form) 0.9693 255 302
ID Description Score Start End Superfamily
af_Q9CXW3_1_48_4.10.860.10 Few Secondary Structures;Irregular;DNA Excision Repair, Uvrb; Chain A;UVR domain 0.9896 261 304 4.10.860.10
1mftA00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.9759 256 302 1.20.5.420
4fvmA06 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;B family DNA polymerase, finger domain 0.9737 257 300 1.10.287.690
5c39B00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.9611 256 305 1.20.5.420
af_Q5TLE6_35_169_1.20.1250.10 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;; 0.9532 256 302 1.20.1250.10
ID Description Score Start End GO Terms
AF-A0A857MJI0-F1-model_v4 ATP-binding cassette domain-containing protein 0.9649 1 543 GO:0005524
GO:0016887
AF-A0A857MJI0-F1-model_v4 ATP-binding cassette domain-containing protein 0.9598 1 543 GO:0005524
GO:0016887
AF-A0A3C0IGG7-F1-model_v4 deleted 0.9094 2 212
AF-A0A2X3EWZ1-F1-model_v4 Glutathione-regulated potassium-efflux system ATP-binding protein 0.9006 2 242 GO:0005524
GO:0016887
AF-A0A538LDF9-F1-model_v4 ABC-F family ATP-binding cassette domain-containing protein 0.8967 2 265 GO:0005524
GO:0016887

Map