F299175

General Info

Members Datasets Scaffolds Average Seq Length
194 121 388 385

Family's Representative Sequence

Representative Sequence 3300048908|Ga0496105_0176956|Ga0496105_0176956_404_1669
Length 421
Sequence MSMATTPTPTTAAAGPTSEQHGIKKHSDGGWGLVPIQTRSERFHSTNVEDFPAITGREATWKYTPVARITELTAGELDGSPYDVATTDTDGVSISWVDRADSRVGVAGSPEERASANAWSSFEKALVVSVTGEDDKEFTLTRSGLGPVARGAHTIIEAAPFSRATLILQNSGAAHLTENVEIVVGESASLTVVTVQEWDDDALHVATHFASIGRDAHLKHIAVTLGGGFVRLNPAAHLVGSGSDTELLGAYFADAGQHLEQQVYVFHDAPHTRSRVTYKGALQGEGARTVWVGDVLIGPKAVGTDTYEQNRNLVLTDGARADSVPNLEIETGDILGAGHASATGRFDDEQLFYLQSRGITEDEARRLVVRGFLAEIVQRIGSPALQERLTAAIEAELMALPTARGADAQAAHAESAGAGEK

Samples

Sample ID Description Type Environment
1 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
7 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
17 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
18 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
19 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
20 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
30 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
31 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
34 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
52 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
57 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
58 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
59 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
60 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
61 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
62 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
63 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
64 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
65 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
79 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
80 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
81 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
82 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
83 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
84 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
85 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
88 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
89 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
90 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
91 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
92 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
93 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
94 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
95 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
96 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
97 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
98 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
99 2643221549 Agromyces sp. Root1464 Isolate Unclassified
100 2643221572 Leifsonia sp. Root60 Isolate Unclassified
101 2643221616 Leifsonia sp. Root227 Isolate Unclassified
102 2643221619 Agromyces sp. Root81 Isolate Unclassified
103 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
104 2643221649 Leifsonia sp. Root4 Isolate Unclassified
105 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
106 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
107 2808606372 Agromyces sp. 23-23 Isolate Unclassified
108 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
109 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
110 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
111 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
112 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
113 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
114 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
115 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
116 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
117 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
118 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
119 2928153084 Leifsonia sp. 563 Isolate Unclassified
120 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
121 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.54
Metatranscriptomes 3.09
Isolates 12.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.53
Nodule 0
Rhizoplane 3.61
Rhizosphere 63.4
Stem 0
Stem Tuber 0.52
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496105_0176956 3300048908 Bacteria 1747
2 JGI24735J21928_10001476 3300002067 Bacteria 8314
3 JGI25164J39214_1000465 3300002772 Bacteria 20556
4 JGI25165J46597_1000330 3300003214 Bacteria 56543
5 Ga0006562J51391_1038052 3300003578 Bacteria 4951
6 Ga0006562J51391_1038053 3300003578 Bacteria 2850
7 Ga0055539_1000008 3300003752 Bacteria 537665
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000493 3300003759 Bacteria 20269
10 Ga0055527_1000001 3300003760 Bacteria 850044
11 Ga0055529_1000018 3300003763 Bacteria 344344
12 Ga0055541_1005683 3300003841 Bacteria 2166
13 Ga0065714_10006954 3300005288 Bacteria 3728
14 Ga0070658_10002027 3300005327 Bacteria 16977
15 Ga0070682_100126433 3300005337 Bacteria 1724
16 Ga0105240_10002502 3300009093 Bacteria 29534
17 Ga0105249_10542768 3300009553 Bacteria 1212
18 Ga0157371_10009058 3300013102 Bacteria 7870
19 Ga0157370_10004734 3300013104 Bacteria 15512
20 Ga0157369_10005055 3300013105 Bacteria 15445
21 Ga0157369_10011356 3300013105 Bacteria 10115
22 Ga0157369_10051544 3300013105 Bacteria 4454
23 Ga0157372_10175979 3300013307 Bacteria 2477
24 Ga0157375_10264225 3300013308 Bacteria 1882
25 Ga0206356_10409690 3300020070 Bacteria 3538
26 Ga0206354_10951258 3300020081 Bacteria 3672
27 Ga0206353_10084005 3300020082 Bacteria 3541
28 Ga0206353_10236415 3300020082 Bacteria 3351
29 Ga0209566_100050 3300025225 Bacteria 234653
30 Ga0209674_100001 3300025226 Bacteria 4013750
31 Ga0209672_100006 3300025228 Bacteria 1004497
32 Ga0209563_100001 3300025230 Bacteria 4013775
33 Ga0209563_103784 3300025230 Bacteria 3040
34 Ga0207427_100052 3300025231 Bacteria 218228
35 Ga0209437_100484 3300025233 Bacteria 29919
36 Ga0209677_100001 3300025253 Bacteria 4013787
37 Ga0209677_102458 3300025253 Bacteria 6949
38 Ga0209148_1000015 3300025254 Bacteria 850103
39 Ga0209233_1000001 3300025261 Bacteria 2992747
40 Ga0209455_1000013 3300025272 Bacteria 850103
41 Ga0209455_1000606 3300025272 Bacteria 22799
42 Ga0207688_10153957 3300025901 Bacteria 1360
43 Ga0207647_10051228 3300025904 Bacteria 2552
44 Ga0207643_10017875 3300025908 Bacteria 3883
45 Ga0207705_10000006 3300025909 Bacteria 657147
46 Ga0207705_10069175 3300025909 Bacteria 2557
47 Ga0207695_10053845 3300025913 Bacteria 4206
48 Ga0207690_10017675 3300025932 Bacteria 4360
49 Ga0207709_10015003 3300025935 Bacteria 4289
50 Ga0207702_10255352 3300026078 Bacteria 1648
51 Ga0207674_10124542 3300026116 Bacteria 2543
52 Ga0207675_100158539 3300026118 Bacteria 2157
53 Ga0307515_10026081 3300028794 Bacteria 10076
54 Ga0307409_100195775 3300031995 Bacteria 1804
55 Ga0395899_0003562 3300037312 Bacteria 12328
56 Ga0395899_0023136 3300037312 Bacteria 4710
57 Ga0395900_0002028 3300037418 Bacteria 22775
58 Ga0395900_0016843 3300037418 Bacteria 7457
59 Ga0395898_0000131 3300037466 Bacteria 192369
60 Ga0395901_0090229 3300038443 Bacteria 3208
61 Ga0466972_0053228 3300044658 Bacteria 1949
62 Ga0466965_0003311 3300044683 Bacteria 7052
63 Ga0466961_0027905 3300044693 Bacteria 3629
64 Ga0466961_0028320 3300044693 Bacteria 3602
65 Ga0466970_0026280 3300044765 Bacteria 3051
66 Ga0466970_0037316 3300044765 Bacteria 2575
67 Ga0466959_0009070 3300045049 Bacteria 7058
68 Ga0495590_0000234 3300046457 Bacteria 30439
69 Ga0496105_0025951 3300048908 Bacteria 4775
70 Ga0496105_0161509 3300048908 Bacteria 1839
71 Ga0496114_0028384 3300048917 Bacteria 4591
72 Ga0496114_0057233 3300048917 Bacteria 3254
73 Ga0496115_0010780 3300048918 Bacteria 6836
74 Ga0496115_0077134 3300048918 Bacteria 2709
75 Ga0496117_0016988 3300048920 Bacteria 6096
76 Ga0496117_0078608 3300048920 Bacteria 2177
77 Ga0496117_0150541 3300048920 Bacteria 1378
78 Ga0496117_0155559 3300048920 Bacteria 1346
79 Ga0496118_0005622 3300048921 Bacteria 14156
80 Ga0496118_0149366 3300048921 Bacteria 1465
81 Ga0496119_0007326 3300048922 Bacteria 9982
82 Ga0496120_0000566 3300048923 Bacteria 56431
83 Ga0496120_0032170 3300048923 Bacteria 3166
84 Ga0496121_0000040 3300048924 Bacteria 348494
85 Ga0496126_0001388 3300048929 Bacteria 38310
86 Ga0496126_0042058 3300048929 Bacteria 4223
87 Ga0496126_0085063 3300048929 Bacteria 2789
88 Ga0501031_0015417 3300049568 Bacteria 4962
89 Ga0501031_0147331 3300049568 Bacteria 1538
90 Ga0501032_0033434 3300049569 Bacteria 3523
91 Ga0501032_0133378 3300049569 Bacteria 1637
92 Ga0501033_0002482 3300049570 Bacteria 15639
93 Ga0501033_0012520 3300049570 Bacteria 6472
94 Ga0501033_0040868 3300049570 Bacteria 3462
95 Ga0501033_0116921 3300049570 Bacteria 1937
96 Ga0501034_0002208 3300049571 Bacteria 24087
97 Ga0501034_0003408 3300049571 Bacteria 18139
98 Ga0501034_0004274 3300049571 Bacteria 15928
99 Ga0501034_0034032 3300049571 Bacteria 5166
100 Ga0501034_0106512 3300049571 Bacteria 2796
101 Ga0501034_0177210 3300049571 Bacteria 2097
102 Ga0501034_0210383 3300049571 Bacteria 1900
103 Ga0501036_0013178 3300049572 Bacteria 6867
104 Ga0501036_0018783 3300049572 Bacteria 5797
105 Ga0501036_0176609 3300049572 Bacteria 1798
106 Ga0501036_0208398 3300049572 Bacteria 1643
107 Ga0501037_0007813 3300049573 Bacteria 7832
108 Ga0501037_0073770 3300049573 Bacteria 2480
109 Ga0501037_0083711 3300049573 Bacteria 2311
110 Ga0501037_0154655 3300049573 Bacteria 1637
111 Ga0501038_0002321 3300049574 Bacteria 17693
112 Ga0501038_0071797 3300049574 Bacteria 2935
113 Ga0501038_0254263 3300049574 Bacteria 1391
114 Ga0501039_0000181 3300049575 Bacteria 44892
115 Ga0501039_0062324 3300049575 Bacteria 2889
116 Ga0501042_0022861 3300049578 Bacteria 4368
117 Ga0501042_0069446 3300049578 Bacteria 2520
118 Ga0501043_0025380 3300049579 Bacteria 4650
119 Ga0501043_0051959 3300049579 Bacteria 3220
120 Ga0501043_0064310 3300049579 Bacteria 2880
121 Ga0501043_0066489 3300049579 Bacteria 2831
122 Ga0501043_0073611 3300049579 Bacteria 2684
123 Ga0501046_0009013 3300049580 Bacteria 8653
124 Ga0501047_0000913 3300049581 Bacteria 30178
125 Ga0501047_0006234 3300049581 Bacteria 11213
126 Ga0501047_0030204 3300049581 Bacteria 5225
127 Ga0501047_0057597 3300049581 Bacteria 3757
128 Ga0501047_0173240 3300049581 Bacteria 2026
129 Ga0501048_0004956 3300049582 Bacteria 10157
130 Ga0501048_0025263 3300049582 Bacteria 4329
131 Ga0501069_0025100 3300049585 Bacteria 3255
132 Ga0501070_0000300 3300049586 Bacteria 45950
133 Ga0501070_0001151 3300049586 Bacteria 23680
134 Ga0501070_0002374 3300049586 Bacteria 16519
135 Ga0501070_0057122 3300049586 Bacteria 3235
136 Ga0501070_0194667 3300049586 Bacteria 1665
137 Ga0501073_0000029 3300049589 Bacteria 117147
138 Ga0501073_0003717 3300049589 Bacteria 11463
139 Ga0501073_0028248 3300049589 Bacteria 4008
140 Ga0501073_0093838 3300049589 Bacteria 2085
141 Ga0501073_0101220 3300049589 Bacteria 2001
142 Ga0501074_0110355 3300049590 Bacteria 1968
143 Ga0501076_0269278 3300049592 Bacteria 1395
144 Ga0501080_0001375 3300049742 Bacteria 20355
145 Ga0501080_0073262 3300049742 Bacteria 3186
146 Ga0501080_0202667 3300049742 Bacteria 1821
147 Ga0501083_0000042 3300049744 Bacteria 92618
148 Ga0501035_0009360 3300049822 Bacteria 9106
149 Ga0501035_0011169 3300049822 Bacteria 8315
150 Ga0501035_0022390 3300049822 Bacteria 5803
151 Ga0501035_0062121 3300049822 Bacteria 3324
152 Ga0501044_0005259 3300049823 Bacteria 14398
153 Ga0501044_0006300 3300049823 Bacteria 13114
154 Ga0501044_0173556 3300049823 Bacteria 2126
155 Ga0501044_0261829 3300049823 Bacteria 1667
156 Ga0501045_0006300 3300049824 Bacteria 8205
157 nmdc:mga00v17_3179_c1 3300050491 Bacteria 8461
158 nmdc:mga0yw44_41146_c1 3300050492 Bacteria 2749
159 nmdc:mga0yw44_7057_c1 3300050492 Bacteria 3131
160 nmdc:mga0yw44_80310_c1 3300050492 Bacteria 2042
161 Ga0500635_0000012 3300053080 Bacteria 138781
162 Ga0500556_0000084 3300053104 Bacteria 89510
163 Ga0500562_000511 3300053108 Bacteria 9393
164 Ga0500593_002461 3300053117 Bacteria 6797
165 Ga0500559_0013685 3300053136 Bacteria 3433
166 Ga0500559_0040146 3300053136 Bacteria 2037
167 Ga0500568_0000014 3300053139 Bacteria 223550
168 Ga0500568_0025584 3300053139 Bacteria 2488
169 Ga0500616_0000125 3300053153 Bacteria 135146
170 Ga0466962_0049378 3300061719 Bacteria 2011
171 2587862827 2585428094 Bacteria 3604039
172 2643767763 2643221549 Bacteria 4042819
173 2643875168 2643221572 Bacteria 3614809
174 2644096099 2643221616 Bacteria 4066575
175 2644111138 2643221619 Bacteria 4158469
176 2644183545 2643221632 Bacteria 3406696
177 2644279724 2643221649 Bacteria 3867359
178 2644382224 2643221669 Bacteria 3611286
179 2723642039 2721755702 Bacteria 4373124
180 2808902019 2808606372 Bacteria 4649509
181 2844842515 2844841374 Bacteria 3917147
182 2857732576 2857729791 Bacteria 4040535
183 2857737394 2857737099 Bacteria 3104305
184 2862996272 2862993130 Bacteria 3860849
185 2884765469 2884763398 Bacteria 4091164
186 2895661295 2895660088 Bacteria 3782833
187 2897563418 2897561785 Bacteria 3256946
188 2919058200 2919055335 Bacteria 3875751
189 2919446208 2919443155 Bacteria 4072969
190 2919524574 2919523602 Bacteria 3788128
191 2928122918 2928121344 Bacteria 3972376
192 2928156503 2928153084 Bacteria 4020257
193 2935411390 2935409751 Bacteria 4179611
194 2964329681 2964326757 Bacteria 3290868
195 Ga0496105_0176956
196 JGI24735J21928_10001476
197 JGI25164J39214_1000465
198 JGI25165J46597_1000330
199 Ga0006562J51391_1038052
200 Ga0006562J51391_1038053
201 Ga0055539_1000008
202 Ga0055533_1000001
203 Ga0055525_1000493
204 Ga0055527_1000001
205 Ga0055529_1000018
206 Ga0055541_1005683
207 Ga0065714_10006954
208 Ga0070658_10002027
209 Ga0070682_100126433
210 Ga0105240_10002502
211 Ga0105249_10542768
212 Ga0157371_10009058
213 Ga0157370_10004734
214 Ga0157369_10005055
215 Ga0157369_10011356
216 Ga0157369_10051544
217 Ga0157372_10175979
218 Ga0157375_10264225
219 Ga0206356_10409690
220 Ga0206354_10951258
221 Ga0206353_10084005
222 Ga0206353_10236415
223 Ga0209566_100050
224 Ga0209674_100001
225 Ga0209672_100006
226 Ga0209563_100001
227 Ga0209563_103784
228 Ga0207427_100052
229 Ga0209437_100484
230 Ga0209677_100001
231 Ga0209677_102458
232 Ga0209148_1000015
233 Ga0209233_1000001
234 Ga0209455_1000013
235 Ga0209455_1000606
236 Ga0207688_10153957
237 Ga0207647_10051228
238 Ga0207643_10017875
239 Ga0207705_10000006
240 Ga0207705_10069175
241 Ga0207695_10053845
242 Ga0207690_10017675
243 Ga0207709_10015003
244 Ga0207702_10255352
245 Ga0207674_10124542
246 Ga0207675_100158539
247 Ga0307515_10026081
248 Ga0307409_100195775
249 Ga0395899_0003562
250 Ga0395899_0023136
251 Ga0395900_0002028
252 Ga0395900_0016843
253 Ga0395898_0000131
254 Ga0395901_0090229
255 Ga0466972_0053228
256 Ga0466965_0003311
257 Ga0466961_0027905
258 Ga0466961_0028320
259 Ga0466970_0026280
260 Ga0466970_0037316
261 Ga0466959_0009070
262 Ga0495590_0000234
263 Ga0496105_0025951
264 Ga0496105_0161509
265 Ga0496114_0028384
266 Ga0496114_0057233
267 Ga0496115_0010780
268 Ga0496115_0077134
269 Ga0496117_0016988
270 Ga0496117_0078608
271 Ga0496117_0150541
272 Ga0496117_0155559
273 Ga0496118_0005622
274 Ga0496118_0149366
275 Ga0496119_0007326
276 Ga0496120_0000566
277 Ga0496120_0032170
278 Ga0496121_0000040
279 Ga0496126_0001388
280 Ga0496126_0042058
281 Ga0496126_0085063
282 Ga0501031_0015417
283 Ga0501031_0147331
284 Ga0501032_0033434
285 Ga0501032_0133378
286 Ga0501033_0002482
287 Ga0501033_0012520
288 Ga0501033_0040868
289 Ga0501033_0116921
290 Ga0501034_0002208
291 Ga0501034_0003408
292 Ga0501034_0004274
293 Ga0501034_0034032
294 Ga0501034_0106512
295 Ga0501034_0177210
296 Ga0501034_0210383
297 Ga0501036_0013178
298 Ga0501036_0018783
299 Ga0501036_0176609
300 Ga0501036_0208398
301 Ga0501037_0007813
302 Ga0501037_0073770
303 Ga0501037_0083711
304 Ga0501037_0154655
305 Ga0501038_0002321
306 Ga0501038_0071797
307 Ga0501038_0254263
308 Ga0501039_0000181
309 Ga0501039_0062324
310 Ga0501042_0022861
311 Ga0501042_0069446
312 Ga0501043_0025380
313 Ga0501043_0051959
314 Ga0501043_0064310
315 Ga0501043_0066489
316 Ga0501043_0073611
317 Ga0501046_0009013
318 Ga0501047_0000913
319 Ga0501047_0006234
320 Ga0501047_0030204
321 Ga0501047_0057597
322 Ga0501047_0173240
323 Ga0501048_0004956
324 Ga0501048_0025263
325 Ga0501069_0025100
326 Ga0501070_0000300
327 Ga0501070_0001151
328 Ga0501070_0002374
329 Ga0501070_0057122
330 Ga0501070_0194667
331 Ga0501073_0000029
332 Ga0501073_0003717
333 Ga0501073_0028248
334 Ga0501073_0093838
335 Ga0501073_0101220
336 Ga0501074_0110355
337 Ga0501076_0269278
338 Ga0501080_0001375
339 Ga0501080_0073262
340 Ga0501080_0202667
341 Ga0501083_0000042
342 Ga0501035_0009360
343 Ga0501035_0011169
344 Ga0501035_0022390
345 Ga0501035_0062121
346 Ga0501044_0005259
347 Ga0501044_0006300
348 Ga0501044_0173556
349 Ga0501044_0261829
350 Ga0501045_0006300
351 nmdc:mga00v17_3179_c1
352 nmdc:mga0yw44_41146_c1
353 nmdc:mga0yw44_7057_c1
354 nmdc:mga0yw44_80310_c1
355 Ga0500635_0000012
356 Ga0500556_0000084
357 Ga0500562_000511
358 Ga0500593_002461
359 Ga0500559_0013685
360 Ga0500559_0040146
361 Ga0500568_0000014
362 Ga0500568_0025584
363 Ga0500616_0000125
364 Ga0466962_0049378
365 2587862827
366 2643767763
367 2643875168
368 2644096099
369 2644111138
370 2644183545
371 2644279724
372 2644382224
373 2723642039
374 2808902019
375 2844842515
376 2857732576
377 2857737394
378 2862996272
379 2884765469
380 2895661295
381 2897563418
382 2919058200
383 2919446208
384 2919524574
385 2928122918
386 2928156503
387 2935411390
388 2964329681

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01458

SUFBD

SUF system FeS cluster assembly, SufBD

149

372

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5awg-assembly2.cif.gz_F crystal structure of hg-bound sufb-sufc-sufd complex from escherichia coli 0.8668 67 374
5awf-assembly1.cif.gz_B crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8438 13 373
4dn7-assembly1.cif.gz_B crystal structure of putative abc transporter, atp-binding protein from methanosarcina mazei go1 0.8428 65 377
5awf-assembly1.cif.gz_B crystal structure of sufb-sufc-sufd complex from escherichia coli 0.7749 13 373
5awg-assembly2.cif.gz_F crystal structure of hg-bound sufb-sufc-sufd complex from escherichia coli 0.7559 67 374
ID Description Score Start End Superfamily
af_Q3S3T0_1_150_1.10.490.10 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.6077 327 380 1.10.490.10
af_F6NT71_1_88_1.10.490.10 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.5823 324 382 1.10.490.10
5jnzB00 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.4597 324 382 1.10.490.10
af_F6NT71_1_88_1.10.490.10 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.4079 324 382 1.10.490.10
af_P53857_171_298_1.10.490.10 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.4049 326 382 1.10.490.10
ID Description Score Start End GO Terms
AF-S7X9D5-F1-model_v4 deleted 0.9693 12 377
AF-A0A2Z3RXQ2-F1-model_v4 FeS cluster assembly protein SufD 0.967 10 377 GO:0016226
AF-A0A7J0CLB4-F1-model_v4 Fe-S cluster assembly protein SufD 0.9581 58 378 GO:0016226
AF-A0A534Q0Y3-F1-model_v4 SufD family Fe-S cluster assembly protein 0.9554 189 381 GO:0016226
AF-A0A095X4Q7-F1-model_v4 ABC transporter permease 0.9544 143 368 GO:0016226

Map