F299182

General Info

Members Datasets Scaffolds Average Seq Length
194 146 388 380

Family's Representative Sequence

Representative Sequence 3300048912|Ga0496109_0064672|Ga0496109_0064672_1010_2344
Length 444
Sequence MPYVLSQILVAVNDAMLMAWEVWWALVLGFAISAIVQAWVPRHRIESSLSGDGPAPLIWATGLGAASSSCSYAAVAIGKSLFQKGASAVSALAFQFASTNLVWELGLVLWALIGWQFTIAEYAGGLVMIALMAALLRLFVSPRLEAEARRHAQEADTGHQHHMAGEQMSLRQRLTSASAWSDVAHNFRGDWQMLWKEITIGFLLAGLVGLLGNDFFNTLFLADAPGPVSAIENVMVGPIIAVLSFVCSVGNVPLAAVLWSGGISFGGVMAFIFADLIVLPIIWVYKKYYGWAFTIRITLLMLVTMAAAALMIDAAFNAAGLAPQVRPSRSDIFSTIRVDYKLFLNILGLVIFASLFGLTMRRGATDPVCGMKVDRVRAVRVDHAGATYYVCSENCRARFEADPERYVTERAAQDIDASHAVDSGLAGAREPGWLRRLSSGRECH

Samples

Sample ID Description Type Environment
1 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
78 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
79 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
80 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
81 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
94 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
98 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
99 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
109 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
110 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
111 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
143 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
144 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0.52
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 17.01
Rhizosphere 80.93
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496109_0064672 3300048912 Bacteria 3348
2 JGI24748J21848_1001702 3300002074 Bacteria 2443
3 JGI24034J26672_10000116 3300002239 Bacteria 12920
4 Ga0070683_100006401 3300005329 Bacteria 9872
5 Ga0070683_100150401 3300005329 Bacteria 2207
6 Ga0070670_100112079 3300005331 Bacteria 2351
7 Ga0070677_10000001 3300005333 Bacteria 118426
8 Ga0070682_100000080 3300005337 Bacteria 85683
9 Ga0068868_100000261 3300005338 Bacteria 35848
10 Ga0070691_10023435 3300005341 Bacteria 2867
11 Ga0070674_100000025 3300005356 Bacteria 78679
12 Ga0070673_100002128 3300005364 Bacteria 11991
13 Ga0070713_100014116 3300005436 Bacteria 5918
14 Ga0070713_100162609 3300005436 Bacteria 1994
15 Ga0070662_100000007 3300005457 Bacteria 168761
16 Ga0070681_10007735 3300005458 Bacteria 10506
17 Ga0068867_100000890 3300005459 Bacteria 20219
18 Ga0070679_100003822 3300005530 Bacteria 13829
19 Ga0068853_100017082 3300005539 Bacteria 5985
20 Ga0070665_100000202 3300005548 Bacteria 104773
21 Ga0070704_100054832 3300005549 Bacteria 2823
22 Ga0068854_100001309 3300005578 Bacteria 15008
23 Ga0068854_100007363 3300005578 Bacteria 7033
24 Ga0068856_100001818 3300005614 Bacteria 22286
25 Ga0068866_10000001 3300005718 Bacteria 519680
26 Ga0068851_10004144 3300005834 Bacteria 6525
27 Ga0068858_100000012 3300005842 Bacteria 216931
28 Ga0068860_100014975 3300005843 Bacteria 7579
29 Ga0081540_1000006 3300005983 Bacteria 208724
30 Ga0070717_10020568 3300006028 Bacteria 5193
31 Ga0070717_10079653 3300006028 Bacteria 2747
32 Ga0070717_10153472 3300006028 Bacteria 1994
33 Ga0070715_10000001 3300006163 Bacteria 693690
34 Ga0070712_100053370 3300006175 Bacteria 2822
35 Ga0070712_100063279 3300006175 Bacteria 2619
36 Ga0075430_100001036 3300006846 Bacteria 21971
37 Ga0075434_100033376 3300006871 Bacteria 5079
38 Ga0068865_100000017 3300006881 Bacteria 109636
39 Ga0075435_100048172 3300007076 Bacteria 3423
40 Ga0075435_100082913 3300007076 Bacteria 2636
41 Ga0105245_10001028 3300009098 Bacteria 25351
42 Ga0105245_10001521 3300009098 Bacteria 20984
43 Ga0105245_10005382 3300009098 Bacteria 11251
44 Ga0114129_10029570 3300009147 Bacteria 7758
45 Ga0114129_10268841 3300009147 Bacteria 2282
46 Ga0105237_10002952 3300009545 Bacteria 20590
47 Ga0105249_10000074 3300009553 Bacteria 145235
48 Ga0105249_10114193 3300009553 Bacteria 2557
49 Ga0105246_10037388 3300011119 Bacteria 3259
50 Ga0157370_10143837 3300013104 Bacteria 2221
51 Ga0157372_10012132 3300013307 Bacteria 9179
52 Ga0157372_10176955 3300013307 Bacteria 2470
53 Ga0206356_11113603 3300020070 Bacteria 1719
54 Ga0207656_10002277 3300025321 Bacteria 6435
55 Ga0207682_10000034 3300025893 Bacteria 56869
56 Ga0207642_10000006 3300025899 Bacteria 230268
57 Ga0207642_10000007 3300025899 Bacteria 226017
58 Ga0207685_10000011 3300025905 Bacteria 213430
59 Ga0207707_10126841 3300025912 Bacteria 2232
60 Ga0207671_10002308 3300025914 Bacteria 20601
61 Ga0207693_10001198 3300025915 Bacteria 23183
62 Ga0207693_10152123 3300025915 Bacteria 1820
63 Ga0207660_10125723 3300025917 Bacteria 1947
64 Ga0207652_10000549 3300025921 Bacteria 38051
65 Ga0207650_10014350 3300025925 Bacteria 5508
66 Ga0207687_10000026 3300025927 Bacteria 173968
67 Ga0207687_10000055 3300025927 Bacteria 88382
68 Ga0207687_10000970 3300025927 Bacteria 19492
69 Ga0207700_10083250 3300025928 Bacteria 2504
70 Ga0207700_10127223 3300025928 Bacteria 2074
71 Ga0207664_10060980 3300025929 Bacteria 3008
72 Ga0207706_10000018 3300025933 Bacteria 168729
73 Ga0207669_10000009 3300025937 Bacteria 168012
74 Ga0207704_10000025 3300025938 Bacteria 135523
75 Ga0207661_10002911 3300025944 Bacteria 11827
76 Ga0207651_10001164 3300025960 Bacteria 11772
77 Ga0207712_10000007 3300025961 Bacteria 539589
78 Ga0207640_10000137 3300025981 Bacteria 54133
79 Ga0207640_10064020 3300025981 Bacteria 2447
80 Ga0207677_10000046 3300026023 Bacteria 105382
81 Ga0207703_10000740 3300026035 Bacteria 32186
82 Ga0207639_10021360 3300026041 Bacteria 4649
83 Ga0207702_10000016 3300026078 Bacteria 226633
84 Ga0207648_10004004 3300026089 Bacteria 15293
85 Ga0268266_10000020 3300028379 Bacteria 527065
86 Ga0268264_10002246 3300028381 Bacteria 17121
87 Ga0265319_1000028 3300028563 Bacteria 135557
88 Ga0265319_1000435 3300028563 Bacteria 30001
89 Ga0265338_10000230 3300028800 Bacteria 103891
90 Ga0265325_10055358 3300031241 Bacteria 2028
91 Ga0265342_10149815 3300031712 Bacteria 1296
92 Ga0395900_0183818 3300037418 Bacteria 2123
93 Ga0395898_0058730 3300037466 Bacteria 3744
94 Ga0395898_0152743 3300037466 Bacteria 2208
95 Ga0436364_0774966 3300037853 Bacteria 3428
96 Ga0395901_0046202 3300038443 Bacteria 4522
97 Ga0395901_0051210 3300038443 Bacteria 4292
98 Ga0436363_1495424 3300039450 Bacteria 3051
99 Ga0436362_0290313 3300039453 Bacteria 2975
100 Ga0451802_0415001 3300041460 Bacteria 1804
101 Ga0451839_1098996 3300041496 Bacteria 2430
102 Ga0451853_3945392 3300041512 Bacteria 6088
103 Ga0466963_0000200 3300044694 Bacteria 25265
104 Ga0466963_0198813 3300044694 Bacteria 1402
105 Ga0466968_0030448 3300044735 Bacteria 2236
106 Ga0466957_0104766 3300044842 Bacteria 1787
107 Ga0466960_0012213 3300044901 Bacteria 3618
108 Ga0466959_0002746 3300045049 Bacteria 11337
109 Ga0466959_0013525 3300045049 Bacteria 5915
110 Ga0466958_0019112 3300045836 Bacteria 3986
111 Ga0466958_0089583 3300045836 Bacteria 1902
112 Ga0466967_0000046 3300045976 Bacteria 43911
113 Ga0466967_0004905 3300045976 Bacteria 9141
114 Ga0466967_0016395 3300045976 Bacteria 5842
115 Ga0466967_0046109 3300045976 Bacteria 3793
116 Ga0466967_0234236 3300045976 Bacteria 1749
117 Ga0495603_0001178 3300046455 Bacteria 15227
118 Ga0495629_0073401 3300046459 Bacteria 2389
119 Ga0495641_0053389 3300046461 Bacteria 1839
120 Ga0495582_0000027 3300046473 Bacteria 79970
121 Ga0495594_0000013 3300046499 Bacteria 103201
122 Ga0495608_0000031 3300046511 Bacteria 145255
123 Ga0495618_0001161 3300046514 Bacteria 17828
124 Ga0495630_0036074 3300046517 Bacteria 3697
125 Ga0495630_0046541 3300046517 Bacteria 3243
126 Ga0495644_0006018 3300046523 Bacteria 4726
127 Ga0495652_0000003 3300046529 Bacteria 597094
128 Ga0495586_0001818 3300046535 Bacteria 11638
129 Ga0495587_0004675 3300046536 Bacteria 8993
130 Ga0495645_0000256 3300046543 Bacteria 38967
131 Ga0495622_0000014 3300046557 Bacteria 182142
132 Ga0495668_0071282 3300046616 Bacteria 1910
133 Ga0495634_0005350 3300046642 Bacteria 9892
134 Ga0495657_0000024 3300046675 Bacteria 145255
135 Ga0495599_0001330 3300046678 Bacteria 14092
136 Ga0495658_0000025 3300046683 Bacteria 79910
137 Ga0495658_0001056 3300046683 Bacteria 14543
138 Ga0495613_0000309 3300046689 Bacteria 44163
139 Ga0495624_0028306 3300046690 Bacteria 3664
140 Ga0495670_0014754 3300046691 Bacteria 3845
141 Ga0495649_0001198 3300046694 Bacteria 20005
142 Ga0495604_0000013 3300047317 Bacteria 234578
143 Ga0495674_0000042 3300047319 Bacteria 94820
144 Ga0495676_0001619 3300047321 Bacteria 19593
145 Ga0495676_0014483 3300047321 Bacteria 7057
146 Ga0495680_0000196 3300047322 Bacteria 65437
147 Ga0495675_0000209 3300047444 Bacteria 42691
148 Ga0495686_0071385 3300047472 Bacteria 2137
149 Ga0495593_0083730 3300047673 Bacteria 1647
150 Ga0496100_0000002 3300048903 Bacteria 489057
151 Ga0496100_0000222 3300048903 Bacteria 30993
152 Ga0496101_0000001 3300048904 Bacteria 489057
153 Ga0496101_0008242 3300048904 Bacteria 6804
154 Ga0496102_0241870 3300048905 Bacteria 1702
155 Ga0496103_0165577 3300048906 Bacteria 1418
156 Ga0496104_0000001 3300048907 Bacteria 711867
157 Ga0496104_0000013 3300048907 Bacteria 397163
158 Ga0496105_0000006 3300048908 Bacteria 393578
159 Ga0496106_0000022 3300048909 Bacteria 166339
160 Ga0496107_0000016 3300048910 Bacteria 172319
161 Ga0496108_0000001 3300048911 Bacteria 919044
162 Ga0496108_0000045 3300048911 Bacteria 137416
163 Ga0496109_0000003 3300048912 Bacteria 420862
164 Ga0496109_0000032 3300048912 Bacteria 162984
165 Ga0496109_0009908 3300048912 Bacteria 8136
166 Ga0496109_0176262 3300048912 Bacteria 2007
167 Ga0496110_0000017 3300048913 Bacteria 83678
168 Ga0496110_0005343 3300048913 Bacteria 10063
169 Ga0496110_0011873 3300048913 Bacteria 7155
170 Ga0496111_0000003 3300048914 Bacteria 116144
171 Ga0496111_0001844 3300048914 Bacteria 12488
172 Ga0496112_0005132 3300048915 Bacteria 11255
173 Ga0496112_0128110 3300048915 Bacteria 2509
174 Ga0496113_0000946 3300048916 Bacteria 15442
175 Ga0496113_0002212 3300048916 Bacteria 11219
176 Ga0496114_0000014 3300048917 Bacteria 297902
177 Ga0496114_0047720 3300048917 Bacteria 3562
178 Ga0496115_0000020 3300048918 Bacteria 171995
179 Ga0496115_0002818 3300048918 Bacteria 12497
180 Ga0496115_0006137 3300048918 Bacteria 8785
181 Ga0501067_0000643 3300049583 Bacteria 18773
182 Ga0501068_0000007 3300049584 Bacteria 77147
183 Ga0501069_0024375 3300049585 Bacteria 3299
184 Ga0501072_0125750 3300049588 Bacteria 2043
185 Ga0501077_0076097 3300049593 Bacteria 2126
186 nmdc:mga05p37_22159_c1 3300050507 Bacteria 7700
187 nmdc:mga0qj67_33694_c1 3300050509 Bacteria 3998
188 Ga0495601_0000072 3300053077 Bacteria 56009
189 Ga0495612_0004552 3300053078 Bacteria 5755
190 Ga0495655_0001231 3300053083 Bacteria 3956
191 Ga0495595_0000014 3300053084 Bacteria 145255
192 Ga0495619_0000022 3300053085 Bacteria 184144
193 Ga0495619_0000319 3300053085 Bacteria 33678
194 Ga0530510_0036491 3300061734 Bacteria 3543
195 Ga0496109_0064672
196 JGI24748J21848_1001702
197 JGI24034J26672_10000116
198 Ga0070683_100006401
199 Ga0070683_100150401
200 Ga0070670_100112079
201 Ga0070677_10000001
202 Ga0070682_100000080
203 Ga0068868_100000261
204 Ga0070691_10023435
205 Ga0070674_100000025
206 Ga0070673_100002128
207 Ga0070713_100014116
208 Ga0070713_100162609
209 Ga0070662_100000007
210 Ga0070681_10007735
211 Ga0068867_100000890
212 Ga0070679_100003822
213 Ga0068853_100017082
214 Ga0070665_100000202
215 Ga0070704_100054832
216 Ga0068854_100001309
217 Ga0068854_100007363
218 Ga0068856_100001818
219 Ga0068866_10000001
220 Ga0068851_10004144
221 Ga0068858_100000012
222 Ga0068860_100014975
223 Ga0081540_1000006
224 Ga0070717_10020568
225 Ga0070717_10079653
226 Ga0070717_10153472
227 Ga0070715_10000001
228 Ga0070712_100053370
229 Ga0070712_100063279
230 Ga0075430_100001036
231 Ga0075434_100033376
232 Ga0068865_100000017
233 Ga0075435_100048172
234 Ga0075435_100082913
235 Ga0105245_10001028
236 Ga0105245_10001521
237 Ga0105245_10005382
238 Ga0114129_10029570
239 Ga0114129_10268841
240 Ga0105237_10002952
241 Ga0105249_10000074
242 Ga0105249_10114193
243 Ga0105246_10037388
244 Ga0157370_10143837
245 Ga0157372_10012132
246 Ga0157372_10176955
247 Ga0206356_11113603
248 Ga0207656_10002277
249 Ga0207682_10000034
250 Ga0207642_10000006
251 Ga0207642_10000007
252 Ga0207685_10000011
253 Ga0207707_10126841
254 Ga0207671_10002308
255 Ga0207693_10001198
256 Ga0207693_10152123
257 Ga0207660_10125723
258 Ga0207652_10000549
259 Ga0207650_10014350
260 Ga0207687_10000026
261 Ga0207687_10000055
262 Ga0207687_10000970
263 Ga0207700_10083250
264 Ga0207700_10127223
265 Ga0207664_10060980
266 Ga0207706_10000018
267 Ga0207669_10000009
268 Ga0207704_10000025
269 Ga0207661_10002911
270 Ga0207651_10001164
271 Ga0207712_10000007
272 Ga0207640_10000137
273 Ga0207640_10064020
274 Ga0207677_10000046
275 Ga0207703_10000740
276 Ga0207639_10021360
277 Ga0207702_10000016
278 Ga0207648_10004004
279 Ga0268266_10000020
280 Ga0268264_10002246
281 Ga0265319_1000028
282 Ga0265319_1000435
283 Ga0265338_10000230
284 Ga0265325_10055358
285 Ga0265342_10149815
286 Ga0395900_0183818
287 Ga0395898_0058730
288 Ga0395898_0152743
289 Ga0436364_0774966
290 Ga0395901_0046202
291 Ga0395901_0051210
292 Ga0436363_1495424
293 Ga0436362_0290313
294 Ga0451802_0415001
295 Ga0451839_1098996
296 Ga0451853_3945392
297 Ga0466963_0000200
298 Ga0466963_0198813
299 Ga0466968_0030448
300 Ga0466957_0104766
301 Ga0466960_0012213
302 Ga0466959_0002746
303 Ga0466959_0013525
304 Ga0466958_0019112
305 Ga0466958_0089583
306 Ga0466967_0000046
307 Ga0466967_0004905
308 Ga0466967_0016395
309 Ga0466967_0046109
310 Ga0466967_0234236
311 Ga0495603_0001178
312 Ga0495629_0073401
313 Ga0495641_0053389
314 Ga0495582_0000027
315 Ga0495594_0000013
316 Ga0495608_0000031
317 Ga0495618_0001161
318 Ga0495630_0036074
319 Ga0495630_0046541
320 Ga0495644_0006018
321 Ga0495652_0000003
322 Ga0495586_0001818
323 Ga0495587_0004675
324 Ga0495645_0000256
325 Ga0495622_0000014
326 Ga0495668_0071282
327 Ga0495634_0005350
328 Ga0495657_0000024
329 Ga0495599_0001330
330 Ga0495658_0000025
331 Ga0495658_0001056
332 Ga0495613_0000309
333 Ga0495624_0028306
334 Ga0495670_0014754
335 Ga0495649_0001198
336 Ga0495604_0000013
337 Ga0495674_0000042
338 Ga0495676_0001619
339 Ga0495676_0014483
340 Ga0495680_0000196
341 Ga0495675_0000209
342 Ga0495686_0071385
343 Ga0495593_0083730
344 Ga0496100_0000002
345 Ga0496100_0000222
346 Ga0496101_0000001
347 Ga0496101_0008242
348 Ga0496102_0241870
349 Ga0496103_0165577
350 Ga0496104_0000001
351 Ga0496104_0000013
352 Ga0496105_0000006
353 Ga0496106_0000022
354 Ga0496107_0000016
355 Ga0496108_0000001
356 Ga0496108_0000045
357 Ga0496109_0000003
358 Ga0496109_0000032
359 Ga0496109_0009908
360 Ga0496109_0176262
361 Ga0496110_0000017
362 Ga0496110_0005343
363 Ga0496110_0011873
364 Ga0496111_0000003
365 Ga0496111_0001844
366 Ga0496112_0005132
367 Ga0496112_0128110
368 Ga0496113_0000946
369 Ga0496113_0002212
370 Ga0496114_0000014
371 Ga0496114_0047720
372 Ga0496115_0000020
373 Ga0496115_0002818
374 Ga0496115_0006137
375 Ga0501067_0000643
376 Ga0501068_0000007
377 Ga0501069_0024375
378 Ga0501072_0125750
379 Ga0501077_0076097
380 nmdc:mga05p37_22159_c1
381 nmdc:mga0qj67_33694_c1
382 Ga0495601_0000072
383 Ga0495612_0004552
384 Ga0495655_0001231
385 Ga0495595_0000014
386 Ga0495619_0000022
387 Ga0495619_0000319
388 Ga0530510_0036491

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04945

YHS

YHS domain

364

410

0.94

PF03773

ArsP_1

Predicted permease

8

314

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zo8-assembly1.cif.gz_A minocycline binding to the deep binding pocket of acrb-g621p 0.343 71 350
2c32-assembly1.cif.gz_A co-axial association of recombinant eye lens aquaporin-0 observed in loosely packed 3d-crystals 0.2385 19 338
2c32-assembly1.cif.gz_A co-axial association of recombinant eye lens aquaporin-0 observed in loosely packed 3d-crystals 0.2371 19 338
4hyj-assembly2.cif.gz_B crystal structure of exiguobacterium sibiricum rhodopsin 0.2369 4 311
4hyj-assembly2.cif.gz_B crystal structure of exiguobacterium sibiricum rhodopsin 0.2344 4 311
ID Description Score Start End Superfamily
af_P35499_692_826_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3153 227 343 1.10.287.70
af_F1LQQ7_641_776_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3074 191 347 1.10.287.70
af_F1RE76_840_978_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.305 227 347 1.10.287.70
af_F1LQQ7_641_776_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.2955 191 347 1.10.287.70
af_Q9VHG7_87_276_1.50.40.10 Mainly Alpha;Alpha/alpha barrel;Mitochondrial carrier fold;Mitochondrial carrier domain 0.2921 127 318 1.50.40.10
ID Description Score Start End GO Terms
AF-A0A537WWG8-F1-model_v4 YHS domain-containing protein 0.9662 4 361 GO:0005886
AF-A0A2R3Z8B1-F1-model_v4 Transporter 0.944 2 359 GO:0005886
AF-A0A1M3BH60-F1-model_v4 Permease 0.9368 4 371 GO:0005886
AF-A0A2A4ID71-F1-model_v4 Permease 0.9343 3 359 GO:0005886
AF-A0A537QW76-F1-model_v4 Permease 0.9329 6 355 GO:0005886

Map