F299281

General Info

Members Datasets Scaffolds Average Seq Length
194 135 194 341

Family's Representative Sequence

Representative Sequence 3300049741|Ga0501079_0191306|Ga0501079_0191306_165_1322
Length 385
Sequence MPRPDTPRRSFTAAALAVALGAPLVAAQASRGRSPETELPANITQLTGFGERASWSPDDRRIAFMGKSFGDAFEIDLRTRLTRLLTGHFVHPGFLRVQYLPNGDLFLIGARTFTDIRTTRSRDQEMWVMKGDAKTPPVALDHKISEGVAISRKSLRVAWSNTRGQYPERLGEGESVVYTADIVYPDGVPRLANKKEVLRGRAPDCTLEAQDFRNDDRELVYTCYRPPYADVFGVDLVTGKVTTYRKLPGEYNEVEGLSPDGRWALVESSRGQGGPERQNSRYIDIWKLALEPESADFVRLTRWGDYEGYKASNPVVSHDGRRIAFQSARNDEPAGVGHGIFILTLGPGANAPGPGGIEAATALAADDAXXXEAPAGRGRKPPRRP

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
99 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
100 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
101 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
125 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
126 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.12
Nodule 0
Rhizoplane 3.09
Rhizosphere 92.27
Stem 0
Stem Tuber 0
Unclassified 0.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10124669 3300005293 Bacteria 2148
2 Ga0065707_10196654 3300005295 Bacteria 1332
3 Ga0070676_10166547 3300005328 Bacteria 1422
4 Ga0070683_100011181 3300005329 Bacteria 7743
5 Ga0070670_100007434 3300005331 Bacteria 9305
6 Ga0070661_100329918 3300005344 Bacteria 1193
7 Ga0070675_100412876 3300005354 Bacteria 1206
8 Ga0070674_100007051 3300005356 Bacteria 6608
9 Ga0070673_100134676 3300005364 Bacteria 2078
10 Ga0070688_100013061 3300005365 Bacteria 4675
11 Ga0070688_100129613 3300005365 Bacteria 1700
12 Ga0070701_10016036 3300005438 Bacteria 3474
13 Ga0070705_100074504 3300005440 Unclassified 2064
14 Ga0070700_100051320 3300005441 Bacteria 2567
15 Ga0070708_100086748 3300005445 Bacteria 2843
16 Ga0070708_100276521 3300005445 Bacteria 1580
17 Ga0070663_100079648 3300005455 Bacteria 2404
18 Ga0070678_100052335 3300005456 Bacteria 2964
19 Ga0070678_100135368 3300005456 Bacteria 1964
20 Ga0070685_10132511 3300005466 Bacteria 1560
21 Ga0070706_100013982 3300005467 Bacteria 7414
22 Ga0070706_100147911 3300005467 Bacteria 2193
23 Ga0070707_100004150 3300005468 Bacteria 13581
24 Ga0070698_100006127 3300005471 Bacteria 13099
25 Ga0070698_100010849 3300005471 Bacteria 9692
26 Ga0070698_100073480 3300005471 Bacteria 3426
27 Ga0070698_100419345 3300005471 Bacteria 1273
28 Ga0070699_100002428 3300005518 Bacteria 16716
29 Ga0070699_100090784 3300005518 Bacteria 2670
30 Ga0070697_100305838 3300005536 Bacteria 1367
31 Ga0070686_100005595 3300005544 Bacteria 6961
32 Ga0070686_100041189 3300005544 Bacteria 2886
33 Ga0070695_100064148 3300005545 Bacteria 2389
34 Ga0070696_100052127 3300005546 Bacteria 2846
35 Ga0070693_100122249 3300005547 Bacteria 1616
36 Ga0070704_100033598 3300005549 Bacteria 3470
37 Ga0070704_100052926 3300005549 Bacteria 2867
38 Ga0070664_100050335 3300005564 Bacteria 3526
39 Ga0068856_100063978 3300005614 Bacteria 3634
40 Ga0070702_100038578 3300005615 Bacteria 2661
41 Ga0068859_100060527 3300005617 Bacteria 3815
42 Ga0068864_100265505 3300005618 Bacteria 1598
43 Ga0068860_100125536 3300005843 Bacteria 2459
44 Ga0068862_100090752 3300005844 Unclassified 2660
45 Ga0081455_10030871 3300005937 Bacteria 4861
46 Ga0081455_10059578 3300005937 Bacteria 3223
47 Ga0081455_10246364 3300005937 Unclassified 1310
48 Ga0081539_10022476 3300005985 Bacteria 4170
49 Ga0075365_10009227 3300006038 Bacteria 5658
50 Ga0075364_10104581 3300006051 Bacteria 1886
51 Ga0075362_10007825 3300006177 Bacteria 4065
52 Ga0075367_10092707 3300006178 Bacteria 1839
53 Ga0075366_10015644 3300006195 Bacteria 4353
54 Ga0097621_100494127 3300006237 Unclassified 1108
55 Ga0075428_100061508 3300006844 Bacteria 4112
56 Ga0075428_100105068 3300006844 Bacteria 3080
57 Ga0075428_100228441 3300006844 Unclassified 2008
58 Ga0075430_100075011 3300006846 Bacteria 2836
59 Ga0075430_100150321 3300006846 Bacteria 1939
60 Ga0075430_100194236 3300006846 Bacteria 1686
61 Ga0075431_100033553 3300006847 Bacteria 5290
62 Ga0075431_100074547 3300006847 Unclassified 3501
63 Ga0075431_100090257 3300006847 Bacteria 3162
64 Ga0075433_10081196 3300006852 Unclassified 2858
65 Ga0075434_100042306 3300006871 Bacteria 4517
66 Ga0075434_100052048 3300006871 Bacteria 4069
67 Ga0075434_100163055 3300006871 Bacteria 2249
68 Ga0075434_100391806 3300006871 Bacteria 1410
69 Ga0075429_100041788 3300006880 Bacteria 3992
70 Ga0068865_100260531 3300006881 Unclassified 1373
71 Ga0097620_100060533 3300006931 Bacteria 3815
72 Ga0075435_100113309 3300007076 Bacteria 2257
73 Ga0111539_10034957 3300009094 Bacteria 6087
74 Ga0111539_10516911 3300009094 Unclassified 1391
75 Ga0105245_10163572 3300009098 Bacteria 2113
76 Ga0114129_10004113 3300009147 Bacteria 20562
77 Ga0114129_10028934 3300009147 Bacteria 7850
78 Ga0114129_10030903 3300009147 Bacteria 7574
79 Ga0114129_10036665 3300009147 Bacteria 6923
80 Ga0114129_10059796 3300009147 Bacteria 5328
81 Ga0114129_10159438 3300009147 Bacteria 3084
82 Ga0114129_10379502 3300009147 Bacteria 1867
83 Ga0105243_10049121 3300009148 Bacteria 3327
84 Ga0105241_10441690 3300009174 Unclassified 1149
85 Ga0105248_10057293 3300009177 Bacteria 4373
86 Ga0105249_10088242 3300009553 Bacteria 2896
87 Ga0157378_10206944 3300013297 Bacteria 1859
88 Ga0163162_10009109 3300013306 Bacteria 9653
89 Ga0163162_10135648 3300013306 Bacteria 2572
90 Ga0157375_10025357 3300013308 Bacteria 5507
91 Ga0157377_10176182 3300014745 Bacteria 1341
92 Ga0157379_10048925 3300014968 Bacteria 3774
93 Ga0157376_10017764 3300014969 Bacteria 5436
94 Ga0207697_10001034 3300025315 Bacteria 15462
95 Ga0207684_10023381 3300025910 Bacteria 5277
96 Ga0207684_10089128 3300025910 Bacteria 2628
97 Ga0207684_10108675 3300025910 Bacteria 2373
98 Ga0207684_10149039 3300025910 Unclassified 2013
99 Ga0207662_10003257 3300025918 Bacteria 8324
100 Ga0207646_10005065 3300025922 Bacteria 14008
101 Ga0207646_10094938 3300025922 Bacteria 2671
102 Ga0207646_10166770 3300025922 Bacteria 1988
103 Ga0207650_10182761 3300025925 Bacteria 1672
104 Ga0207670_10263757 3300025936 Bacteria 1336
105 Ga0207669_10003842 3300025937 Bacteria 6547
106 Ga0207669_10099582 3300025937 Bacteria 1917
107 Ga0207704_10017313 3300025938 Bacteria 3731
108 Ga0207711_10186501 3300025941 Bacteria 1888
109 Ga0207689_10051514 3300025942 Bacteria 3393
110 Ga0207679_10022964 3300025945 Bacteria 4257
111 Ga0207651_10122170 3300025960 Bacteria 1977
112 Ga0207640_10177979 3300025981 Bacteria 1592
113 Ga0207658_10050660 3300025986 Bacteria 3057
114 Ga0207677_10164047 3300026023 Unclassified 1730
115 Ga0207648_10002915 3300026089 Bacteria 18109
116 Ga0207675_100038714 3300026118 Bacteria 4450
117 Ga0207683_10024868 3300026121 Bacteria 5161
118 Ga0207683_10473539 3300026121 Bacteria 1155
119 Ga0207698_10185354 3300026142 Bacteria 1848
120 Ga0207428_10000868 3300027907 Bacteria 34000
121 Ga0207428_10067360 3300027907 Bacteria 2819
122 Ga0268264_10154257 3300028381 Bacteria 2062
123 Ga0307513_10028798 3300031456 Bacteria 6344
124 Ga0307408_100297017 3300031548 Unclassified 1351
125 Ga0307415_100120931 3300032126 Bacteria 1963
126 Ga0373933_0023131 3300035724 Bacteria 3547
127 Ga0373937_0025217 3300036401 Bacteria 5368
128 Ga0373937_0037506 3300036401 Bacteria 4417
129 Ga0395899_0016745 3300037312 Bacteria 5589
130 Ga0395900_0011899 3300037418 Bacteria 8896
131 Ga0395898_0028012 3300037466 Bacteria 5649
132 Ga0395905_0005320 3300037471 Bacteria 13159
133 Ga0395901_0003532 3300038443 Bacteria 15753
134 Ga0453683_0031171 3300044673 Unclassified 3369
135 Ga0453683_0035054 3300044673 Unclassified 3163
136 Ga0495592_0243447 3300046454 Bacteria 1192
137 Ga0495580_0013045 3300046472 Bacteria 6360
138 Ga0495664_0002441 3300046477 Bacteria 9998
139 Ga0495594_0004433 3300046499 Bacteria 7222
140 Ga0495594_0022627 3300046499 Unclassified 3362
141 Ga0495608_0187664 3300046511 Bacteria 1306
142 Ga0495652_0004812 3300046529 Bacteria 12845
143 Ga0495665_0002541 3300046531 Bacteria 9840
144 Ga0495665_0062267 3300046531 Unclassified 1970
145 Ga0495587_0016634 3300046536 Bacteria 4575
146 Ga0495645_0004161 3300046543 Bacteria 9885
147 Ga0495667_0008206 3300046559 Bacteria 7087
148 Ga0495635_0180188 3300046663 Bacteria 1436
149 Ga0495599_0003641 3300046678 Bacteria 9037
150 Ga0495623_0103481 3300046679 Bacteria 1732
151 Ga0495604_0021124 3300047317 Bacteria 5195
152 Ga0495680_0147884 3300047322 Bacteria 1715
153 Ga0495675_0030325 3300047444 Unclassified 3450
154 Ga0495675_0094338 3300047444 Bacteria 1876
155 Ga0495602_0086918 3300048088 Unclassified 2608
156 Ga0496104_0099152 3300048907 Bacteria 2789
157 Ga0496106_0254012 3300048909 Bacteria 1406
158 Ga0496108_0215599 3300048911 Bacteria 1667
159 Ga0496108_0231725 3300048911 Unclassified 1606
160 Ga0496109_0016530 3300048912 Bacteria 6452
161 Ga0496110_0041672 3300048913 Bacteria 4007
162 Ga0501072_0022686 3300049588 Bacteria 4870
163 Ga0501075_0269470 3300049591 Bacteria 1298
164 Ga0501076_0031901 3300049592 Bacteria 4111
165 Ga0501079_0156918 3300049741 Bacteria 1774
166 Ga0501079_0191306 3300049741 Unclassified 1597
167 Ga0501081_0021501 3300049743 Bacteria 4307
168 nmdc:mga03683_8672_c1 3300050489 Bacteria 3584
169 nmdc:mga0yw44_21384_c1 3300050492 Bacteria 3608
170 nmdc:mga0k408_1911_c1 3300050493 Bacteria 11148
171 nmdc:mga05p37_191160_c1 3300050507 Bacteria 2485
172 nmdc:mga05p37_210954_c1 3300050507 Bacteria 2348
173 nmdc:mga05p37_239323_c1 3300050507 Bacteria 2183
174 nmdc:mga05p37_8840_c1 3300050507 Bacteria 11901
175 nmdc:mga05p37_924_c1 3300050507 Bacteria 33158
176 nmdc:mga05p37_99808_c1 3300050507 Bacteria 3575
177 nmdc:mga09592_566535_c1 3300050508 Unclassified 975
178 nmdc:mga0qj67_119322_c1 3300050509 Bacteria 2133
179 nmdc:mga0qj67_139616_c1 3300050509 Bacteria 1964
180 nmdc:mga06r32_17476_c1 3300050510 Bacteria 6546
181 nmdc:mga06r32_243230_c1 3300050510 Unclassified 1787
182 nmdc:mga06r32_27490_c1 3300050510 Bacteria 5315
183 nmdc:mga06r32_66206_c1 3300050510 Bacteria 3486
184 nmdc:mga08y16_11714_c1 3300050511 Bacteria 9215
185 nmdc:mga08y16_294329_c1 3300050511 Bacteria 1674
186 nmdc:mga0n895_156033_c1 3300050512 Bacteria 2313
187 nmdc:mga0n895_292613_c1 3300050512 Unclassified 1651
188 nmdc:mga0rr50_42569_c1 3300050513 Bacteria 3317
189 nmdc:mga0a205_122332_c1 3300050515 Bacteria 2502
190 nmdc:mga0a205_20821_c1 3300050515 Bacteria 6197
191 nmdc:mga0a205_359253_c1 3300050515 Bacteria 1323
192 nmdc:mga0a205_6254_c1 3300050515 Bacteria 10750
193 nmdc:mga0a205_99424_c1 3300050515 Unclassified 2807
194 Ga0501084_0071590 3300054114 Bacteria 2903

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025938 Ga0207704_10017313 Ga0207704_100173132 278
2 3300054114 Ga0501084_0071590 Ga0501084_0071590_24_860 278
3 3300050508 nmdc:mga09592_566535_c1 nmdc:mga09592_566535_c1_24_926 297
4 3300025981 Ga0207640_10177979 Ga0207640_101779792 310
5 3300031456 Ga0307513_10028798 Ga0307513_100287984 312
6 3300005985 Ga0081539_10022476 Ga0081539_100224765 320
7 3300044673 Ga0453683_0031171 Ga0453683_0031171_340_1317 321
8 3300005440 Ga0070705_100074504 Ga0070705_1000745042 322
9 3300005547 Ga0070693_100122249 Ga0070693_1001222492 322
10 3300050515 nmdc:mga0a205_6254_c1 nmdc:mga0a205_6254_c1_7906_8886 322
11 3300013308 Ga0157375_10025357 Ga0157375_100253573 324
12 3300048911 Ga0496108_0215599 Ga0496108_0215599_139_1131 324
13 3300050515 nmdc:mga0a205_20821_c1 nmdc:mga0a205_20821_c1_4831_5823 326
14 3300005536 Ga0070697_100305838 Ga0070697_1003058381 327
15 3300046499 Ga0495594_0022627 Ga0495594_0022627_1987_2994 327
16 3300013297 Ga0157378_10206944 Ga0157378_102069442 329
17 3300037312 Ga0395899_0016745 Ga0395899_0016745_2193_3200 330
18 3300037418 Ga0395900_0011899 Ga0395900_0011899_2867_3874 330
19 3300037466 Ga0395898_0028012 Ga0395898_0028012_4015_5022 330
20 3300038443 Ga0395901_0003532 Ga0395901_0003532_8640_9647 330
21 3300050510 nmdc:mga06r32_66206_c1 nmdc:mga06r32_66206_c1_2470_3474 330
22 3300025925 Ga0207650_10182761 Ga0207650_101827613 332
23 3300031548 Ga0307408_100297017 Ga0307408_1002970172 333
24 3300032126 Ga0307415_100120931 Ga0307415_1001209312 333
25 3300006844 Ga0075428_100105068 Ga0075428_1001050683 334
26 3300006846 Ga0075430_100194236 Ga0075430_1001942362 334
27 3300006847 Ga0075431_100033553 Ga0075431_1000335533 334
28 3300006871 Ga0075434_100042306 Ga0075434_1000423064 334
29 3300009094 Ga0111539_10516911 Ga0111539_105169111 334
30 3300009147 Ga0114129_10028934 Ga0114129_100289345 334
31 3300009147 Ga0114129_10030903 Ga0114129_100309034 334
32 3300049591 Ga0501075_0269470 Ga0501075_0269470_136_1164 334
33 3300050509 nmdc:mga0qj67_119322_c1 nmdc:mga0qj67_119322_c1_780_1790 334
34 3300050510 nmdc:mga06r32_17476_c1 nmdc:mga06r32_17476_c1_1023_2042 334
35 3300050511 nmdc:mga08y16_294329_c1 nmdc:mga08y16_294329_c1_294_1307 334
36 3300005328 Ga0070676_10166547 Ga0070676_101665472 335
37 3300005365 Ga0070688_100013061 Ga0070688_1000130612 335
38 3300005467 Ga0070706_100147911 Ga0070706_1001479112 335
39 3300005471 Ga0070698_100073480 Ga0070698_1000734804 335
40 3300005544 Ga0070686_100041189 Ga0070686_1000411892 335
41 3300025910 Ga0207684_10108675 Ga0207684_101086752 335
42 3300025922 Ga0207646_10166770 Ga0207646_101667702 335
43 3300025936 Ga0207670_10263757 Ga0207670_102637571 335
44 3300025960 Ga0207651_10122170 Ga0207651_101221702 335
45 3300037471 Ga0395905_0005320 Ga0395905_0005320_10297_11322 335
46 3300005445 Ga0070708_100276521 Ga0070708_1002765212 336
47 3300005467 Ga0070706_100013982 Ga0070706_1000139824 336
48 3300005471 Ga0070698_100010849 Ga0070698_1000108493 336
49 3300005545 Ga0070695_100064148 Ga0070695_1000641482 336
50 3300005549 Ga0070704_100033598 Ga0070704_1000335982 336
51 3300009147 Ga0114129_10036665 Ga0114129_100366655 336
52 3300025910 Ga0207684_10023381 Ga0207684_100233813 336
53 3300050507 nmdc:mga05p37_8840_c1 nmdc:mga05p37_8840_c1_5819_6829 336
54 3300005356 Ga0070674_100007051 Ga0070674_1000070514 337
55 3300005365 Ga0070688_100129613 Ga0070688_1001296132 337
56 3300005438 Ga0070701_10016036 Ga0070701_100160364 337
57 3300005441 Ga0070700_100051320 Ga0070700_1000513201 337
58 3300005455 Ga0070663_100079648 Ga0070663_1000796482 337
59 3300005456 Ga0070678_100052335 Ga0070678_1000523353 337
60 3300005466 Ga0070685_10132511 Ga0070685_101325112 337
61 3300005471 Ga0070698_100006127 Ga0070698_1000061278 337
62 3300005518 Ga0070699_100002428 Ga0070699_10000242815 337
63 3300005544 Ga0070686_100005595 Ga0070686_1000055952 337
64 3300005546 Ga0070696_100052127 Ga0070696_1000521271 337
65 3300005549 Ga0070704_100052926 Ga0070704_1000529262 337
66 3300005615 Ga0070702_100038578 Ga0070702_1000385782 337
67 3300005617 Ga0068859_100060527 Ga0068859_1000605273 337
68 3300005843 Ga0068860_100125536 Ga0068860_1001255361 337
69 3300006038 Ga0075365_10009227 Ga0075365_100092275 337
70 3300006051 Ga0075364_10104581 Ga0075364_101045812 337
71 3300006177 Ga0075362_10007825 Ga0075362_100078252 337
72 3300006178 Ga0075367_10092707 Ga0075367_100927072 337
73 3300006195 Ga0075366_10015644 Ga0075366_100156444 337
74 3300006237 Ga0097621_100494127 Ga0097621_1004941271 337
75 3300006880 Ga0075429_100041788 Ga0075429_1000417884 337
76 3300006881 Ga0068865_100260531 Ga0068865_1002605312 337
77 3300006931 Ga0097620_100060533 Ga0097620_1000605333 337
78 3300007076 Ga0075435_100113309 Ga0075435_1001133091 337
79 3300009094 Ga0111539_10034957 Ga0111539_100349573 337
80 3300009147 Ga0114129_10159438 Ga0114129_101594382 337
81 3300009148 Ga0105243_10049121 Ga0105243_100491212 337
82 3300009177 Ga0105248_10057293 Ga0105248_100572934 337
83 3300009553 Ga0105249_10088242 Ga0105249_100882423 337
84 3300013306 Ga0163162_10135648 Ga0163162_101356483 337
85 3300014968 Ga0157379_10048925 Ga0157379_100489252 337
86 3300025918 Ga0207662_10003257 Ga0207662_100032575 337
87 3300025941 Ga0207711_10186501 Ga0207711_101865012 337
88 3300025986 Ga0207658_10050660 Ga0207658_100506603 337
89 3300026023 Ga0207677_10164047 Ga0207677_101640471 337
90 3300026089 Ga0207648_10002915 Ga0207648_100029155 337
91 3300026118 Ga0207675_100038714 Ga0207675_1000387142 337
92 3300026121 Ga0207683_10024868 Ga0207683_100248684 337
93 3300027907 Ga0207428_10000868 Ga0207428_1000086815 337
94 3300028381 Ga0268264_10154257 Ga0268264_101542572 337
95 3300044673 Ga0453683_0035054 Ga0453683_0035054_195_1238 337
96 3300050489 nmdc:mga03683_8672_c1 nmdc:mga03683_8672_c1_1002_2027 337
97 3300050492 nmdc:mga0yw44_21384_c1 nmdc:mga0yw44_21384_c1_776_1801 337
98 3300050493 nmdc:mga0k408_1911_c1 nmdc:mga0k408_1911_c1_3974_4999 337
99 3300050507 nmdc:mga05p37_210954_c1 nmdc:mga05p37_210954_c1_674_1711 337
100 3300050507 nmdc:mga05p37_239323_c1 nmdc:mga05p37_239323_c1_313_1344 337
101 3300050511 nmdc:mga08y16_11714_c1 nmdc:mga08y16_11714_c1_6864_7889 337
102 3300050513 nmdc:mga0rr50_42569_c1 nmdc:mga0rr50_42569_c1_1731_2756 337
103 3300050515 nmdc:mga0a205_122332_c1 nmdc:mga0a205_122332_c1_1035_2060 337
104 3300050515 nmdc:mga0a205_359253_c1 nmdc:mga0a205_359253_c1_239_1264 337
105 3300005293 Ga0065715_10124669 Ga0065715_101246692 338
106 3300005295 Ga0065707_10196654 Ga0065707_101966541 338
107 3300005329 Ga0070683_100011181 Ga0070683_1000111815 338
108 3300005331 Ga0070670_100007434 Ga0070670_1000074345 338
109 3300005344 Ga0070661_100329918 Ga0070661_1003299181 338
110 3300005354 Ga0070675_100412876 Ga0070675_1004128762 338
111 3300005364 Ga0070673_100134676 Ga0070673_1001346763 338
112 3300005445 Ga0070708_100086748 Ga0070708_1000867482 338
113 3300005456 Ga0070678_100135368 Ga0070678_1001353683 338
114 3300005468 Ga0070707_100004150 Ga0070707_1000041507 338
115 3300005471 Ga0070698_100419345 Ga0070698_1004193451 338
116 3300005518 Ga0070699_100090784 Ga0070699_1000907843 338
117 3300005564 Ga0070664_100050335 Ga0070664_1000503354 338
118 3300005614 Ga0068856_100063978 Ga0068856_1000639783 338
119 3300005618 Ga0068864_100265505 Ga0068864_1002655052 338
120 3300005844 Ga0068862_100090752 Ga0068862_1000907522 338
121 3300005937 Ga0081455_10030871 Ga0081455_100308715 338
122 3300005937 Ga0081455_10059578 Ga0081455_100595781 338
123 3300005937 Ga0081455_10246364 Ga0081455_102463641 338
124 3300006844 Ga0075428_100061508 Ga0075428_1000615082 338
125 3300006844 Ga0075428_100228441 Ga0075428_1002284412 338
126 3300006846 Ga0075430_100075011 Ga0075430_1000750112 338
127 3300006846 Ga0075430_100150321 Ga0075430_1001503212 338
128 3300006847 Ga0075431_100074547 Ga0075431_1000745471 338
129 3300006847 Ga0075431_100090257 Ga0075431_1000902573 338
130 3300006852 Ga0075433_10081196 Ga0075433_100811962 338
131 3300006871 Ga0075434_100052048 Ga0075434_1000520485 338
132 3300006871 Ga0075434_100163055 Ga0075434_1001630552 338
133 3300006871 Ga0075434_100391806 Ga0075434_1003918062 338
134 3300009098 Ga0105245_10163572 Ga0105245_101635722 338
135 3300009147 Ga0114129_10004113 Ga0114129_1000411314 338
136 3300009147 Ga0114129_10059796 Ga0114129_100597964 338
137 3300009147 Ga0114129_10379502 Ga0114129_103795022 338
138 3300009174 Ga0105241_10441690 Ga0105241_104416901 338
139 3300013306 Ga0163162_10009109 Ga0163162_100091097 338
140 3300014745 Ga0157377_10176182 Ga0157377_101761821 338
141 3300014969 Ga0157376_10017764 Ga0157376_100177643 338
142 3300025315 Ga0207697_10001034 Ga0207697_1000103410 338
143 3300025910 Ga0207684_10089128 Ga0207684_100891282 338
144 3300025910 Ga0207684_10149039 Ga0207684_101490392 338
145 3300025922 Ga0207646_10005065 Ga0207646_100050657 338
146 3300025922 Ga0207646_10094938 Ga0207646_100949382 338
147 3300025937 Ga0207669_10003842 Ga0207669_100038424 338
148 3300025937 Ga0207669_10099582 Ga0207669_100995822 338
149 3300025942 Ga0207689_10051514 Ga0207689_100515142 338
150 3300025945 Ga0207679_10022964 Ga0207679_100229644 338
151 3300026121 Ga0207683_10473539 Ga0207683_104735391 338
152 3300026142 Ga0207698_10185354 Ga0207698_101853542 338
153 3300027907 Ga0207428_10067360 Ga0207428_100673602 338
154 3300035724 Ga0373933_0023131 Ga0373933_0023131_1855_2913 338
155 3300036401 Ga0373937_0025217 Ga0373937_0025217_2543_3601 338
156 3300036401 Ga0373937_0037506 Ga0373937_0037506_1372_2430 338
157 3300046454 Ga0495592_0243447 Ga0495592_0243447_98_1156 338
158 3300046472 Ga0495580_0013045 Ga0495580_0013045_2245_3303 338
159 3300046477 Ga0495664_0002441 Ga0495664_0002441_7368_8426 338
160 3300046499 Ga0495594_0004433 Ga0495594_0004433_1634_2692 338
161 3300046511 Ga0495608_0187664 Ga0495608_0187664_165_1223 338
162 3300046529 Ga0495652_0004812 Ga0495652_0004812_6254_7312 338
163 3300046531 Ga0495665_0002541 Ga0495665_0002541_1955_3013 338
164 3300046531 Ga0495665_0062267 Ga0495665_0062267_423_1499 338
165 3300046536 Ga0495587_0016634 Ga0495587_0016634_3027_4085 338
166 3300046543 Ga0495645_0004161 Ga0495645_0004161_3680_4738 338
167 3300046559 Ga0495667_0008206 Ga0495667_0008206_3564_4622 338
168 3300046663 Ga0495635_0180188 Ga0495635_0180188_224_1282 338
169 3300046678 Ga0495599_0003641 Ga0495599_0003641_5453_6511 338
170 3300046679 Ga0495623_0103481 Ga0495623_0103481_565_1623 338
171 3300047317 Ga0495604_0021124 Ga0495604_0021124_3127_4185 338
172 3300047322 Ga0495680_0147884 Ga0495680_0147884_78_1136 338
173 3300047444 Ga0495675_0030325 Ga0495675_0030325_1698_2756 338
174 3300047444 Ga0495675_0094338 Ga0495675_0094338_594_1652 338
175 3300048088 Ga0495602_0086918 Ga0495602_0086918_120_1178 338
176 3300048907 Ga0496104_0099152 Ga0496104_0099152_1477_2496 338
177 3300048909 Ga0496106_0254012 Ga0496106_0254012_82_1098 338
178 3300048911 Ga0496108_0231725 Ga0496108_0231725_498_1514 338
179 3300048912 Ga0496109_0016530 Ga0496109_0016530_155_1174 338
180 3300048913 Ga0496110_0041672 Ga0496110_0041672_1857_2873 338
181 3300049588 Ga0501072_0022686 Ga0501072_0022686_3839_4855 338
182 3300049592 Ga0501076_0031901 Ga0501076_0031901_2633_3649 338
183 3300049741 Ga0501079_0156918 Ga0501079_0156918_239_1255 338
184 3300049741 Ga0501079_0191306 Ga0501079_0191306_165_1322 338
185 3300049743 Ga0501081_0021501 Ga0501081_0021501_59_1075 338
186 3300050507 nmdc:mga05p37_191160_c1 nmdc:mga05p37_191160_c1_503_1534 338
187 3300050507 nmdc:mga05p37_924_c1 nmdc:mga05p37_924_c1_16721_17767 338
188 3300050507 nmdc:mga05p37_99808_c1 nmdc:mga05p37_99808_c1_701_1741 338
189 3300050509 nmdc:mga0qj67_139616_c1 nmdc:mga0qj67_139616_c1_524_1549 338
190 3300050510 nmdc:mga06r32_243230_c1 nmdc:mga06r32_243230_c1_242_1282 338
191 3300050510 nmdc:mga06r32_27490_c1 nmdc:mga06r32_27490_c1_1007_2047 338
192 3300050512 nmdc:mga0n895_156033_c1 nmdc:mga0n895_156033_c1_1188_2282 338
193 3300050512 nmdc:mga0n895_292613_c1 nmdc:mga0n895_292613_c1_196_1236 338
194 3300050515 nmdc:mga0a205_99424_c1 nmdc:mga0a205_99424_c1_1517_2557 338

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07676

PD40

WD40-like Beta Propeller Repeat

42

66

0.83

PF07676

PD40

WD40-like Beta Propeller Repeat

306

342

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ojh-assembly1.cif.gz_A the structure of putative tolb from agrobacterium tumefaciens 0.8205 71 324
8em7-assembly1.cif.gz_B cryo-em structure of lrp2 at ph 5.2 0.795 46 291
5chb-assembly1.cif.gz_C crystal structure of nvpizza2-s16h58 coordinating a cdcl2 nanocrystal 0.7831 46 135
3s8z-assembly1.cif.gz_A crystal structure of lrp6-e3e4 0.7766 46 293
4zcn-assembly1.cif.gz_A crystal structure of nvpizza2-s16s58 0.7747 46 135
ID Description Score Start End Superfamily
2ojhA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8101 55 324 2.120.10.30
af_Q5JTN6_182_312_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7987 49 107 2.130.10.10
af_Q9D994_190_301_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7868 49 107 2.130.10.10
af_A0A1D6GDM6_475_615_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7836 199 326 2.120.10.30
af_P01132_492_789_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7835 49 294 2.120.10.30
ID Description Score Start End GO Terms
AF-A0A2V7UCX9-F1-model_v4 Uncharacterized protein 0.9945 41 338
AF-W0RM87-F1-model_v4 WD40-like beta Propeller containing protein 0.9942 26 338
AF-A0A2V4WGC5-F1-model_v4 deleted 0.9912 25 338
AF-A0A7W0V392-F1-model_v4 Uncharacterized protein 0.9871 165 338
AF-A0A2V9QWM5-F1-model_v4 Uncharacterized protein 0.9781 113 338

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pLDDT pTM Quality
92.05 0.87 High
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Predicted Structure (AlphaFold2)

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