F299376

General Info

Members Datasets Scaffolds Average Seq Length
194 163 388 1286

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221548|2643762767
Length 1478
Sequence PVLGMGSSVVFFFSPQAPPFMRIMGVLMLVSTVAMVVAQIVRHRRGTQGQMGDVRRDYLKYLAQTRRTVRRTARSQRDVQLYLHPAPEQLWSVVAEGSRVWERRVGDKDFAQVRVGLGAQQLSTPLVAPDTAPVDELEPMSAGAMQQFLAVHGTLDGLPMAVSMRAFYHVTVSGRPDAAQSTARSLVAQLVTMHSPDDLMVAVVAAPGAVGRWDWTKWLPHTQVPGQVDGAGTKRLFGDDLGELEPLLAGRLDGRPRFGRENRPVLDQPHIVVVLDGGMVPPDSLFAAAEGLQGVTIVEVVPGELDEPRGGLSIVVRPGLLRLESGAGLAYEGVPDGISLEAAEALARQLAPLRMGGGDDDEPLLANLDFTDLLNLGDAASVDVARTWRPRSVSERLRVPIGVGEDGQPVMLDLKEAAQEGMGPHGLCVGATGSGKSELLRTLVLGLAVTHSSETLNFVLADFKGGATFAGMSQMPHVAAVITNLADDLTLVDRMGDAIRGELQRRQELLRSAGNYANIHDYEKARGAGAALEPLASLVLVIDEFSELLTAKPDFIDMFIQIGRIGRSLGVHLLLASQRLEEGKLRGLDTYLSYRIGLRTFSAAESRTALGVPDAYHLPSVPGSGYLKFGTDEMTRFKAAYVSGTYRTGGPDLSVGQLPIERRPAVFSAAPVPVVYAASDPAHLPARTADDDALADTVLDVIVRRLEGQGVPAHQVWLPPLDRAPTLDQLLPGLAATADRGFTSTEYTRPGGLTVPLGLIDKPFEQRREVLYRDFSGAAGHMLVVGGPQSGKSTMMRALVSSFALTHTPHEVQFYGLDFGGGGLVSLAGLPHVGGMASRLDPERVRRTVAEVGGVLTRREEFFRAHSIDSIATYRRKRARGELPGEAWGDVFLVIDGWGGFRAEYEGLEQVITDIASRGLGYGIHVVITAARYMEVRAALKDQILGRLELRLGDVMDSEFDRKVAANVPTGVPGRGQVPEKLHFMGALPRIDSVSSGDDLSEGTAAFVEAVKANWAGPAAPSVRLLPRKLPADQLPKGFEFPERGIAIGIDETSLEPVFVDFETDPFFLVFGESESGKTNLLRLIAKQIAERYSPDEAKIVVGDYRRALLGALPESHLLEYAPMASAMQMHMEALAGVFSRRQPPTDVTPQQLRDRSWWSGPQIFIIVDDYDLVATNAGNPLAPLAEYLPFARDTGVRFIIARNSAGASRAMYEGFMQRIKELGAQGVVLAGDPSEGELIGSVRGHAMPPGRGYFASRRRGTPLVQTGRLYRARASRTRYPPFRFPGRSRGRVSHALALASCAAYTQRPGTGSRDGRSGHTPAYGGRVGFDEDWGLLRAQPPAPQGTSMRLNGVDEGPLPGLGGRADLASTPAEKKAAANTIETELEPDTRKAADWADESSATAVKEFAGWDTGAGLKKVTETWDKQVKVLMGRLSAEKNSLRGASTLFGGNELEVNSQFSPVLRPPTGPYASGLDGL

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
3 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
4 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
5 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
6 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
7 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
8 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
9 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
10 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
13 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
15 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
16 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
17 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
18 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
19 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
20 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
21 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
22 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
23 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
24 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
25 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
26 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
27 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
28 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
29 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
30 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
31 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
32 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
33 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
34 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
35 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
36 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
37 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
38 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
39 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
40 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
41 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
42 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
43 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
44 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
45 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
46 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
47 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
48 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
49 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
50 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
51 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
52 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
53 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
54 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
55 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
56 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
57 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
58 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
59 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
60 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
61 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
62 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
63 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
64 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
65 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
66 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
67 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
68 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
69 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
81 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
84 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
85 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
86 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
87 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
88 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
89 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
90 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
91 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
92 2643221548 Streptomyces sp. Root55 Isolate Unclassified
93 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
94 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
95 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
96 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
97 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
98 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
99 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
100 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
101 2643221647 Streptomyces sp. Root369 Isolate Unclassified
102 2643221670 Streptomyces sp. Root431 Isolate Unclassified
103 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
104 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
105 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
106 2643221714 Streptomyces sp. Root264 Isolate Unclassified
107 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
108 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
109 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
110 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
111 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
112 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
113 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
114 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
115 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
116 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
117 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
118 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
119 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
120 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
121 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
122 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
123 2862574272 Streptomyces sp. AcE210 Isolate Nodule
124 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
125 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
126 2867369537 Streptomyces sp. Z26 Isolate Unclassified
127 2867428634 Streptomyces sp. RP5T Isolate Unclassified
128 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
129 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
130 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
131 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
132 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
133 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
134 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
135 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
136 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
137 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
138 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
139 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
140 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
141 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
142 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
143 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
144 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
145 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
146 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
147 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
148 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
149 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
150 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
151 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
152 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
153 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
154 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
155 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
156 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
157 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
158 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
159 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
160 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
161 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
162 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
163 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 61.86
Metatranscriptomes 0
Isolates 38.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.58
Nodule 0.52
Rhizoplane 4.64
Rhizosphere 67.01
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100002383 3300005347 Bacteria 13807
2 Ga0070668_100015519 3300005347 Bacteria 5695
3 Ga0068862_100000065 3300005844 Bacteria 124435
4 Ga0075369_10001036 3300006186 Bacteria 9294
5 Ga0105240_10057471 3300009093 Bacteria 4860
6 Ga0105237_10000869 3300009545 Bacteria 41028
7 Ga0105239_10007180 3300010375 Bacteria 12811
8 Ga0207688_10014097 3300025901 Bacteria 4347
9 Ga0207647_10007796 3300025904 Bacteria 7707
10 Ga0207671_10000084 3300025914 Bacteria 143562
11 Ga0207671_10005170 3300025914 Bacteria 12134
12 Ga0207668_10001614 3300025972 Bacteria 13168
13 Ga0207668_10011304 3300025972 Bacteria 5418
14 Ga0207678_10021929 3300026067 Bacteria 5599
15 Ga0207678_10030694 3300026067 Bacteria 4693
16 Ga0207675_100008937 3300026118 Bacteria 9402
17 Ga0268265_10000022 3300028380 Bacteria 270788
18 Ga0307517_10003803 3300028786 Bacteria 23421
19 Ga0307512_10004295 3300030522 Bacteria 15723
20 Ga0307513_10000002 3300031456 Bacteria 842612
21 Ga0307508_10005613 3300031616 Bacteria 11892
22 Ga0307516_10022956 3300031730 Bacteria 6402
23 Ga0307507_10008775 3300033179 Bacteria 13804
24 Ga0307507_10036357 3300033179 Bacteria 5034
25 Ga0395898_0006856 3300037466 Bacteria 12114
26 Ga0436364_1241570 3300037853 Bacteria 9488
27 Ga0451853_0644077 3300041512 Bacteria 5752
28 Ga0439449_0001180 3300042007 Bacteria 10241
29 Ga0439457_000593 3300042014 Bacteria 10627
30 Ga0450894_000123 3300042131 Bacteria 13435
31 Ga0450899_000102 3300042135 Bacteria 7505
32 Ga0450903_000234 3300042138 Bacteria 12363
33 Ga0450906_000732 3300042145 Bacteria 7092
34 Ga0466965_0000719 3300044683 Bacteria 12314
35 Ga0466961_0000985 3300044693 Bacteria 17653
36 Ga0466963_0000038 3300044694 Bacteria 42471
37 Ga0466971_0001061 3300044719 Bacteria 11397
38 Ga0466970_0000652 3300044765 Bacteria 17061
39 Ga0466970_0002558 3300044765 Bacteria 8773
40 Ga0466958_0000184 3300045836 Bacteria 22549
41 Ga0466958_0001160 3300045836 Bacteria 12232
42 Ga0466967_0002272 3300045976 Bacteria 11852
43 Ga0495592_0020205 3300046454 Bacteria 5066
44 Ga0495603_0002084 3300046455 Bacteria 11755
45 Ga0495603_0002291 3300046455 Bacteria 11245
46 Ga0495603_0003258 3300046455 Bacteria 9668
47 Ga0495629_0000534 3300046459 Bacteria 31412
48 Ga0495629_0003360 3300046459 Bacteria 12079
49 Ga0495638_0006893 3300046460 Bacteria 8201
50 Ga0495638_0009477 3300046460 Bacteria 6829
51 Ga0495605_0007935 3300046474 Bacteria 6011
52 Ga0495585_0007504 3300046492 Bacteria 6672
53 Ga0495594_0003831 3300046499 Bacteria 7727
54 Ga0495648_0014031 3300046524 Bacteria 5891
55 Ga0495666_0003488 3300046526 Bacteria 7938
56 Ga0495640_0011268 3300046533 Bacteria 6884
57 Ga0495611_0001668 3300046648 Bacteria 10767
58 Ga0495588_0002215 3300046674 Bacteria 8320
59 Ga0495613_0001623 3300046689 Bacteria 17130
60 Ga0495649_0005592 3300046694 Bacteria 7954
61 Ga0495672_0005024 3300047320 Bacteria 10583
62 Ga0495676_0003893 3300047321 Bacteria 13569
63 Ga0495680_0019985 3300047322 Bacteria 5644
64 Ga0495687_003461 3300047443 Bacteria 11409
65 Ga0495687_008111 3300047443 Bacteria 6064
66 Ga0495687_014106 3300047443 Bacteria 4131
67 Ga0495673_0000843 3300047469 Bacteria 28477
68 Ga0496100_0001594 3300048903 Bacteria 11184
69 Ga0496101_0000297 3300048904 Bacteria 34748
70 Ga0496102_0000003 3300048905 Bacteria 592263
71 Ga0496102_0011360 3300048905 Bacteria 7673
72 Ga0496103_0000014 3300048906 Bacteria 290397
73 Ga0496110_0024460 3300048913 Bacteria 5147
74 Ga0496114_0009136 3300048917 Bacteria 7857
75 Ga0496115_0005282 3300048918 Bacteria 9391
76 Ga0496116_0000071 3300048919 Bacteria 244521
77 Ga0496117_0000003 3300048920 Bacteria 1881097
78 Ga0496118_0000001 3300048921 Bacteria 1881100
79 Ga0496119_0000266 3300048922 Bacteria 74075
80 Ga0496120_0000235 3300048923 Bacteria 94653
81 Ga0496121_0000019 3300048924 Bacteria 499976
82 Ga0496126_0002774 3300048929 Bacteria 23094
83 Ga0501031_0001342 3300049568 Bacteria 15155
84 Ga0501032_0001903 3300049569 Bacteria 16474
85 Ga0501032_0003028 3300049569 Bacteria 13033
86 Ga0501033_0000766 3300049570 Bacteria 29564
87 Ga0501033_0003400 3300049570 Bacteria 13112
88 Ga0501034_0003434 3300049571 Bacteria 18093
89 Ga0501034_0010770 3300049571 Bacteria 9498
90 Ga0501034_0034984 3300049571 Bacteria 5094
91 Ga0501036_0000714 3300049572 Bacteria 24593
92 Ga0501036_0003475 3300049572 Bacteria 12595
93 Ga0501036_0004766 3300049572 Bacteria 10955
94 Ga0501037_0000675 3300049573 Bacteria 26117
95 Ga0501038_0004737 3300049574 Bacteria 12654
96 Ga0501038_0030293 3300049574 Bacteria 4789
97 Ga0501039_0011646 3300049575 Bacteria 6697
98 Ga0501042_0009039 3300049578 Bacteria 6623
99 Ga0501042_0010416 3300049578 Bacteria 6234
100 Ga0501047_0001165 3300049581 Bacteria 26060
101 Ga0501047_0017962 3300049581 Bacteria 6779
102 Ga0501048_0014586 3300049582 Bacteria 5816
103 Ga0501083_0003726 3300049744 Bacteria 10706
104 Ga0501035_0002130 3300049822 Bacteria 19690
105 Ga0501035_0003183 3300049822 Bacteria 15739
106 Ga0501035_0006251 3300049822 Bacteria 11199
107 Ga0501035_0027007 3300049822 Bacteria 5250
108 Ga0501044_0004100 3300049823 Bacteria 16341
109 Ga0501044_0023882 3300049823 Bacteria 6498
110 Ga0501044_0043720 3300049823 Bacteria 4652
111 nmdc:mga06r32_1381_c3 3300050510 Bacteria 5431
112 Ga0495619_0008528 3300053085 Bacteria 6483
113 Ga0500556_0001865 3300053104 Bacteria 7587
114 Ga0500562_001505 3300053108 Bacteria 5760
115 Ga0500652_001333 3300053131 Bacteria 7759
116 Ga0500573_0011954 3300053140 Bacteria 4866
117 Ga0501084_0006831 3300054114 Bacteria 9389
118 Ga0501082_0000936 3300060353 Bacteria 25818
119 Ga0466962_0000526 3300061719 Bacteria 16771
120 Ga0466962_0001072 3300061719 Bacteria 12574
121 2643762767 2643221548 Bacteria 8053412
122 2554255933 2554235005 Bacteria 6457341
123 2558913512 2558860112 Bacteria 9931328
124 2585307896 2582581313 Bacteria 10042643
125 2585316860 2582581314 Bacteria 11452267
126 2586064509 2585427649 Bacteria 9053857
127 2616700145 2616644814 Bacteria 11555299
128 2616906149 2616644941 Bacteria 8510691
129 2643943749 2643221587 Bacteria 7586415
130 2644269709 2643221647 Bacteria 10741251
131 2644387231 2643221670 Bacteria 6497041
132 2644433992 2643221677 Bacteria 7584031
133 2644437659 2643221678 Bacteria 9540101
134 2644459407 2643221682 Bacteria 6743283
135 2644629118 2643221714 Bacteria 9015452
136 2738706872 2738541274 Bacteria 6909446
137 2739333579 2738543028 Bacteria 6917070
138 2753268850 2751185782 Bacteria 11227053
139 2768647158 2767802112 Bacteria 6465194
140 2785340847 2784746763 Bacteria 9783172
141 2785371915 2784746768 Bacteria 10036182
142 2786673023 2786546132 Bacteria 10419719
143 2793976685 2791355406 Bacteria 11364898
144 2793976694 2791355406 Bacteria 11364898
145 2808844421 2808606359 Bacteria 9866990
146 2809586266 2808606522 Bacteria 9488490
147 2811844057 2808606982 Bacteria 7791042
148 2819698870 2818991463 Bacteria 7948711
149 2852639814 2852635781 Bacteria 8251373
150 2862183488 2862178590 Bacteria 8583590
151 2862290767 2862290372 Bacteria 7471434
152 2862514242 2862507626 Bacteria 9425308
153 2862577128 2862574272 Bacteria 10567477
154 2863408992 2863404153 Bacteria 9672205
155 2867350959 2867346516 Bacteria 7608576
156 2867374160 2867369537 Bacteria 6501581
157 2867434362 2867428634 Bacteria 9590268
158 2877678666 2877676314 Bacteria 9512378
159 2912717241 2912715099 Bacteria 9460473
160 2912729831 2912723979 Bacteria 8557534
161 2915768942 2915768154 Bacteria 8424322
162 2917740783 2917736166 Bacteria 9690793
163 2918506858 2918501144 Bacteria 8668083
164 2919475473 2919468124 Bacteria 9133025
165 2935396057 2935390628 Bacteria 7043367
166 2946070203 2946064051 Bacteria 8957905
167 2946078084 2946072368 Bacteria 8999607
168 2954383630 2954380949 Bacteria 10050426
169 2954679337 2954673503 Bacteria 9685905
170 2954684818 2954682443 Bacteria 9862841
171 2954694421 2954691527 Bacteria 10720516
172 2954709623 2954701450 Bacteria 10834262
173 2954713923 2954711539 Bacteria 10867210
174 2954723891 2954721474 Bacteria 10456478
175 2954737944 2954731030 Bacteria 10243860
176 2954742790 2954740390 Bacteria 10229294
177 2954756803 2954749733 Bacteria 10366972
178 2954761751 2954759201 Bacteria 9358192
179 2990092723 2990088156 Bacteria 6657676
180 2997606193 2997600082 Bacteria 9896405
181 3006324690 3006321560 Bacteria 8247479
182 3006489588 3006486233 Bacteria 8157040
183 8003323113 8003314358 Bacteria 10575343
184 8025479598 8025478263 Bacteria 8209203
185 8047895739 8047893842 Bacteria 11723082
186 8048135574 8048127548 Bacteria 11053136
187 8048363190 8048356638 Bacteria 11044339
188 8048363199 8048356638 Bacteria 11044339
189 8048372763 8048369669 Bacteria 11666822
190 8048381697 8048379754 Bacteria 11877923
191 8048412535 8048406513 Bacteria 8936924
192 8056448415 8056447290 Bacteria 7680491
193 8056668307 8056667051 Bacteria 6953971
194 8056831668 8056829672 Bacteria 9045328
195 Ga0070668_100002383
196 Ga0070668_100015519
197 Ga0068862_100000065
198 Ga0075369_10001036
199 Ga0105240_10057471
200 Ga0105237_10000869
201 Ga0105239_10007180
202 Ga0207688_10014097
203 Ga0207647_10007796
204 Ga0207671_10000084
205 Ga0207671_10005170
206 Ga0207668_10001614
207 Ga0207668_10011304
208 Ga0207678_10021929
209 Ga0207678_10030694
210 Ga0207675_100008937
211 Ga0268265_10000022
212 Ga0307517_10003803
213 Ga0307512_10004295
214 Ga0307513_10000002
215 Ga0307508_10005613
216 Ga0307516_10022956
217 Ga0307507_10008775
218 Ga0307507_10036357
219 Ga0395898_0006856
220 Ga0436364_1241570
221 Ga0451853_0644077
222 Ga0439449_0001180
223 Ga0439457_000593
224 Ga0450894_000123
225 Ga0450899_000102
226 Ga0450903_000234
227 Ga0450906_000732
228 Ga0466965_0000719
229 Ga0466961_0000985
230 Ga0466963_0000038
231 Ga0466971_0001061
232 Ga0466970_0000652
233 Ga0466970_0002558
234 Ga0466958_0000184
235 Ga0466958_0001160
236 Ga0466967_0002272
237 Ga0495592_0020205
238 Ga0495603_0002084
239 Ga0495603_0002291
240 Ga0495603_0003258
241 Ga0495629_0000534
242 Ga0495629_0003360
243 Ga0495638_0006893
244 Ga0495638_0009477
245 Ga0495605_0007935
246 Ga0495585_0007504
247 Ga0495594_0003831
248 Ga0495648_0014031
249 Ga0495666_0003488
250 Ga0495640_0011268
251 Ga0495611_0001668
252 Ga0495588_0002215
253 Ga0495613_0001623
254 Ga0495649_0005592
255 Ga0495672_0005024
256 Ga0495676_0003893
257 Ga0495680_0019985
258 Ga0495687_003461
259 Ga0495687_008111
260 Ga0495687_014106
261 Ga0495673_0000843
262 Ga0496100_0001594
263 Ga0496101_0000297
264 Ga0496102_0000003
265 Ga0496102_0011360
266 Ga0496103_0000014
267 Ga0496110_0024460
268 Ga0496114_0009136
269 Ga0496115_0005282
270 Ga0496116_0000071
271 Ga0496117_0000003
272 Ga0496118_0000001
273 Ga0496119_0000266
274 Ga0496120_0000235
275 Ga0496121_0000019
276 Ga0496126_0002774
277 Ga0501031_0001342
278 Ga0501032_0001903
279 Ga0501032_0003028
280 Ga0501033_0000766
281 Ga0501033_0003400
282 Ga0501034_0003434
283 Ga0501034_0010770
284 Ga0501034_0034984
285 Ga0501036_0000714
286 Ga0501036_0003475
287 Ga0501036_0004766
288 Ga0501037_0000675
289 Ga0501038_0004737
290 Ga0501038_0030293
291 Ga0501039_0011646
292 Ga0501042_0009039
293 Ga0501042_0010416
294 Ga0501047_0001165
295 Ga0501047_0017962
296 Ga0501048_0014586
297 Ga0501083_0003726
298 Ga0501035_0002130
299 Ga0501035_0003183
300 Ga0501035_0006251
301 Ga0501035_0027007
302 Ga0501044_0004100
303 Ga0501044_0023882
304 Ga0501044_0043720
305 nmdc:mga06r32_1381_c3
306 Ga0495619_0008528
307 Ga0500556_0001865
308 Ga0500562_001505
309 Ga0500652_001333
310 Ga0500573_0011954
311 Ga0501084_0006831
312 Ga0501082_0000936
313 Ga0466962_0000526
314 Ga0466962_0001072
315 2643762767
316 2554255933
317 2558913512
318 2585307896
319 2585316860
320 2586064509
321 2616700145
322 2616906149
323 2643943749
324 2644269709
325 2644387231
326 2644433992
327 2644437659
328 2644459407
329 2644629118
330 2738706872
331 2739333579
332 2753268850
333 2768647158
334 2785340847
335 2785371915
336 2786673023
337 2793976685
338 2793976694
339 2808844421
340 2809586266
341 2811844057
342 2819698870
343 2852639814
344 2862183488
345 2862290767
346 2862514242
347 2862577128
348 2863408992
349 2867350959
350 2867374160
351 2867434362
352 2877678666
353 2912717241
354 2912729831
355 2915768942
356 2917740783
357 2918506858
358 2919475473
359 2935396057
360 2946070203
361 2946078084
362 2954383630
363 2954679337
364 2954684818
365 2954694421
366 2954709623
367 2954713923
368 2954723891
369 2954737944
370 2954742790
371 2954756803
372 2954761751
373 2990092723
374 2997606193
375 3006324690
376 3006489588
377 8003323113
378 8025479598
379 8047895739
380 8048135574
381 8048363190
382 8048363199
383 8048372763
384 8048381697
385 8048412535
386 8056448415
387 8056668307
388 8056831668

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01580

FtsK_SpoIIIE

FtsK/SpoIIIE family

384

582

0.9

PF01580

FtsK_SpoIIIE

FtsK/SpoIIIE family

752

993

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nh0-assembly2.cif.gz_B cytoplasmic domain of the thermomonospora curvata type vii secretion atpase eccc 0.9664 387 1303
4nh0-assembly1.cif.gz_A cytoplasmic domain of the thermomonospora curvata type vii secretion atpase eccc 0.964 387 1303
4nh0-assembly2.cif.gz_B cytoplasmic domain of the thermomonospora curvata type vii secretion atpase eccc 0.963 387 1303
4nh0-assembly1.cif.gz_A cytoplasmic domain of the thermomonospora curvata type vii secretion atpase eccc 0.9607 387 1303
4n1a-assembly3.cif.gz_E thermomonospora curvata eccc (atpases 2 and 3) in complex with a signal sequence peptide 0.9582 745 1303
ID Description Score Start End Superfamily
4nh0A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9792 749 1058 3.40.50.300
4nh0A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9729 749 1058 3.40.50.300
af_P9WNA7_998_1234_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.972 1067 1303 3.40.50.300
4nh0B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9666 387 748 3.40.50.300
af_P9WNA7_998_1234_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.964 1067 1303 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1W2LH45-F1-model_v4 FtsK domain-containing protein 0.9911 1197 1305
AF-A0A1I5VTZ1-F1-model_v4 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family 0.9861 1124 1305
AF-A0A6G3VPB6-F1-model_v4 deleted 0.9857 467 596
AF-A0A6B3GUW2-F1-model_v4 Type VII secretion protein EccCb 0.9838 730 985 GO:0003677
GO:0005524
AF-A0A7W3X1N5-F1-model_v4 Type VII secretion protein EccCb 0.9837 762 1027 GO:0003677
GO:0005524

Map