F299697

General Info

Members Datasets Scaffolds Average Seq Length
195 115 390 400

Family's Representative Sequence

Representative Sequence 3300005356|Ga0070674_100029050|Ga0070674_1000290503
Length 441
Sequence LRAFTFEAKRKAHTSTYMKAKSELKRRENFDKSLANNCKISGIIPVFYSVLLVIAAVCTSGAALAQSGHVNPWAPAELTPLSPPASLTNGVWLKGDLHVHSRHSKESSNNPVAKIISFSKSVGIDFLAITDHDNHVDGDVAHHTWADPDFKSDSVLLLYAAEWTTTRGHGNAFSARPYDHQRLYDVRDQRDVVVGAVKKELGIHLSANHPSGKDHFGYSYDMIESIEVWNSAVWSKNANAIMIWDDMLSSGRKLTGRGGSDAHHGTPETPAQETKNSYQAKANYVGTPTTWVFATARTTQAVIDALTNGRVSVSANPYAPRVEFYADINQDGKMDMMMGDNAKATGKPVKFRVQLSGNTVPEGEYTVSIVKNGDAFSTLKTTGKTPIVEFTDTPAMIGRTYYRVTVEGPSTPYPQVPGSMALSGNMVGLSNPIYFNFDPNF

Samples

Sample ID Description Type Environment
1 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
8 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
9 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
17 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
42 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
43 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
44 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
45 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
46 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
50 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
61 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
62 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
63 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
64 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
65 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
66 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
69 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
70 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
71 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
74 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
75 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
76 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
77 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
78 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
79 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
80 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
83 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
84 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
85 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
86 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
87 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
88 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
89 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
90 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
91 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
92 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
98 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
99 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
100 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
101 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
102 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
103 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
104 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
105 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
106 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
107 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
108 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
109 2738541302 Pedobacter sp. CF074 Isolate Unclassified
110 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
111 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
112 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
113 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
114 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
115 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.9
Metatranscriptomes 0
Isolates 4.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 34.87
Nodule 0
Rhizoplane 0.51
Rhizosphere 50.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070674_100029050 3300005356 Bacteria 3637
2 JGI24740J21852_10001177 3300001979 Bacteria 11806
3 JGI24739J22299_10004736 3300001989 Bacteria 5194
4 JGI24737J22298_10000230 3300001990 Bacteria 18503
5 JGI24735J21928_10000004 3300002067 Bacteria 381713
6 JGI25162J39368_1000056 3300002737 Bacteria 146755
7 JGI25154J39366_1000001 3300002738 Bacteria 483450
8 JGI25157J39369_1003862 3300002741 Bacteria 2912
9 JGI25150J39212_1000080 3300002774 Bacteria 58442
10 JGI25153J46596_10000025 3300003215 Bacteria 237813
11 JGI25153J46596_10018410 3300003215 Bacteria 2714
12 rootH1_10060012 3300003316 Bacteria 6062
13 rootL2_10013216 3300003322 Bacteria 9268
14 rootL2_10095077 3300003322 Bacteria 4734
15 rootL2_10153411 3300003322 Bacteria 8502
16 rootH1_10014058 3300003323 Bacteria 71578
17 rootH1_10150900 3300003323 Bacteria 8355
18 rootH1_10231650 3300003323 Bacteria 1776
19 JGI25160J50197_1001133 3300003354 Bacteria 13625
20 JGI25160J50197_1006557 3300003354 Bacteria 4693
21 Ga0055526_1000311 3300003771 Bacteria 40594
22 Ga0055526_1021490 3300003771 Bacteria 2243
23 Ga0055537_1000752 3300003773 Bacteria 16560
24 Ga0055536_1010691 3300003781 Bacteria 3608
25 Ga0055528_1000679 3300003790 Bacteria 24521
26 Ga0055530_10000451 3300003791 Bacteria 36535
27 Ga0055530_10002541 3300003791 Bacteria 11622
28 Ga0055540_1002966 3300003792 Bacteria 8517
29 Ga0055531_10000356 3300003794 Bacteria 44739
30 Ga0055531_10018143 3300003794 Bacteria 2922
31 Ga0055543_1003879 3300004625 Bacteria 4234
32 Ga0065165_1000105 3300005262 Bacteria 140409
33 Ga0065165_1000307 3300005262 Bacteria 80513
34 Ga0068853_100104355 3300005539 Bacteria 2509
35 Ga0070665_100338070 3300005548 Bacteria 1510
36 Ga0068855_100052221 3300005563 Bacteria 4813
37 Ga0068854_100229981 3300005578 Bacteria 1471
38 Ga0075366_10005404 3300006195 Bacteria 6921
39 Ga0105240_10000117 3300009093 Bacteria 165286
40 Ga0105240_10000119 3300009093 Bacteria 163675
41 Ga0105240_10246885 3300009093 Bacteria 2066
42 Ga0105240_10321690 3300009093 Bacteria 1763
43 Ga0105241_10151595 3300009174 Bacteria 1897
44 Ga0105237_10000028 3300009545 Bacteria 201366
45 Ga0105237_10004377 3300009545 Bacteria 16371
46 Ga0105237_10014849 3300009545 Bacteria 8125
47 Ga0105237_10015517 3300009545 Bacteria 7925
48 Ga0105239_10000161 3300010375 Bacteria 97242
49 Ga0105239_10001542 3300010375 Bacteria 30444
50 Ga0105239_10008760 3300010375 Bacteria 11452
51 Ga0105239_10011362 3300010375 Bacteria 9935
52 Ga0105239_10012733 3300010375 Bacteria 9358
53 Ga0105239_10022081 3300010375 Bacteria 7016
54 Ga0157369_10166828 3300013105 Bacteria 2322
55 Ga0157374_10000001 3300013296 Bacteria 1077351
56 Ga0157378_10137973 3300013297 Bacteria 2262
57 Ga0163162_10000108 3300013306 Bacteria 74606
58 Ga0163162_10004662 3300013306 Bacteria 13215
59 Ga0157372_10002753 3300013307 Bacteria 19009
60 Ga0157372_10019356 3300013307 Bacteria 7335
61 Ga0163163_10104640 3300014325 Bacteria 2856
62 Ga0157376_10005670 3300014969 Bacteria 8744
63 Ga0157376_10013796 3300014969 Bacteria 6041
64 Ga0163161_10004072 3300017792 Bacteria 10222
65 Ga0163161_10014058 3300017792 Bacteria 5573
66 Ga0209437_100124 3300025233 Bacteria 199789
67 Ga0207425_1000027 3300025245 Bacteria 299995
68 Ga0209646_1000002 3300025246 Bacteria 1425781
69 Ga0209646_1003625 3300025246 Bacteria 3000
70 Ga0209026_1000229 3300025250 Bacteria 76521
71 Ga0209129_1005337 3300025258 Bacteria 4590
72 Ga0209565_1000254 3300025263 Bacteria 56637
73 Ga0209673_1000034 3300025273 Bacteria 328788
74 Ga0209676_1004258 3300025292 Bacteria 8077
75 Ga0209025_1000818 3300025294 Bacteria 49773
76 Ga0209564_1000670 3300025295 Bacteria 50564
77 Ga0209564_1001297 3300025295 Bacteria 27044
78 Ga0209564_1004227 3300025295 Bacteria 8934
79 Ga0209564_1015669 3300025295 Bacteria 3068
80 Ga0209758_1000009 3300025297 Bacteria 1123483
81 Ga0209758_1000905 3300025297 Bacteria 40245
82 Ga0209758_1002092 3300025297 Bacteria 21216
83 Ga0209758_1011801 3300025297 Bacteria 4995
84 Ga0209758_1012474 3300025297 Bacteria 4755
85 Ga0209050_1000005 3300025298 Bacteria 1557793
86 Ga0209050_1000031 3300025298 Bacteria 458181
87 Ga0209050_1000306 3300025298 Bacteria 100510
88 Ga0209050_1001344 3300025298 Bacteria 27243
89 Ga0209050_1005981 3300025298 Bacteria 7386
90 Ga0207426_1000324 3300025302 Bacteria 91661
91 Ga0207426_1000558 3300025302 Bacteria 51284
92 Ga0207426_1005470 3300025302 Bacteria 5786
93 Ga0207426_1009667 3300025302 Bacteria 3796
94 Ga0209051_1000525 3300025303 Bacteria 47573
95 Ga0209051_1049171 3300025303 Bacteria 1423
96 Ga0209257_1000007 3300025304 Bacteria 1564415
97 Ga0209257_1000073 3300025304 Bacteria 325833
98 Ga0209257_1000899 3300025304 Bacteria 41739
99 Ga0209257_1000974 3300025304 Bacteria 39098
100 Ga0209257_1001362 3300025304 Bacteria 29534
101 Ga0207695_10000077 3300025913 Bacteria 307107
102 Ga0207695_10000139 3300025913 Bacteria 216873
103 Ga0207671_10001361 3300025914 Bacteria 28549
104 Ga0207671_10002459 3300025914 Bacteria 19791
105 Ga0207671_10004946 3300025914 Bacteria 12499
106 Ga0207671_10005688 3300025914 Bacteria 11397
107 Ga0207667_10016927 3300025949 Bacteria 8223
108 Ga0207667_10297766 3300025949 Bacteria 1648
109 Ga0207640_10236965 3300025981 Bacteria 1408
110 Ga0307517_10005170 3300028786 Bacteria 19797
111 Ga0307515_10000859 3300028794 Bacteria 69963
112 Ga0307515_10001800 3300028794 Bacteria 47827
113 Ga0307511_10001670 3300030521 Bacteria 23376
114 Ga0307513_10010592 3300031456 Bacteria 11535
115 Ga0307509_10098079 3300031507 Bacteria 2977
116 Ga0307516_10000111 3300031730 Bacteria 94707
117 Ga0307413_10081328 3300031824 Bacteria 2077
118 Ga0307414_10023956 3300032004 Bacteria 3883
119 Ga0307510_10005782 3300033180 Bacteria 14743
120 Ga0439459_0001471 3300042438 Bacteria 3477
121 Ga0466972_0000012 3300044658 Bacteria 246338
122 Ga0466972_0051168 3300044658 Bacteria 1993
123 Ga0466965_0019799 3300044683 Bacteria 3232
124 Ga0466965_0052675 3300044683 Bacteria 2022
125 Ga0466957_0000498 3300044842 Bacteria 19670
126 Ga0466957_0001210 3300044842 Bacteria 13449
127 Ga0495638_0000007 3300046460 Bacteria 602783
128 Ga0495638_0000039 3300046460 Bacteria 247726
129 Ga0495650_0000277 3300046471 Bacteria 98027
130 Ga0495585_0000058 3300046492 Bacteria 112144
131 Ga0495585_0000868 3300046492 Bacteria 25803
132 Ga0495606_0013751 3300046507 Bacteria 6369
133 Ga0495610_0001048 3300046512 Bacteria 25414
134 Ga0495610_0007069 3300046512 Bacteria 7579
135 Ga0495616_0002689 3300046513 Bacteria 11654
136 Ga0495616_0007678 3300046513 Bacteria 6449
137 Ga0495637_0001670 3300046520 Bacteria 12828
138 Ga0495648_0011337 3300046524 Bacteria 6722
139 Ga0495652_0055136 3300046529 Bacteria 3382
140 Ga0495609_0064800 3300046538 Bacteria 1611
141 Ga0495609_0082502 3300046538 Bacteria 1404
142 Ga0495633_0000620 3300046558 Bacteria 33596
143 Ga0495668_0000667 3300046616 Bacteria 41283
144 Ga0495611_0000058 3300046648 Bacteria 79572
145 Ga0495625_0000009 3300046660 Bacteria 404954
146 Ga0495625_0000048 3300046660 Bacteria 198976
147 Ga0495625_0000742 3300046660 Bacteria 45511
148 Ga0495625_0001618 3300046660 Bacteria 26556
149 Ga0495625_0005655 3300046660 Bacteria 11328
150 Ga0495625_0014906 3300046660 Bacteria 6181
151 Ga0495661_0000812 3300046665 Bacteria 29364
152 Ga0495661_0005347 3300046665 Bacteria 9129
153 Ga0495661_0005525 3300046665 Bacteria 8969
154 Ga0495658_0089432 3300046683 Bacteria 1821
155 Ga0495649_0000002 3300046694 Bacteria 1093458
156 Ga0495649_0000059 3300046694 Bacteria 98956
157 Ga0495649_0050417 3300046694 Bacteria 2259
158 Ga0495672_0001890 3300047320 Bacteria 19922
159 Ga0495687_001360 3300047443 Bacteria 22645
160 Ga0495686_0000004 3300047472 Bacteria 869019
161 Ga0495686_0000052 3300047472 Bacteria 262622
162 Ga0495686_0000112 3300047472 Bacteria 168354
163 Ga0495686_0000134 3300047472 Bacteria 149997
164 Ga0495686_0003179 3300047472 Bacteria 14470
165 Ga0495686_0004313 3300047472 Bacteria 11763
166 Ga0495686_0082277 3300047472 Bacteria 1965
167 Ga0496124_0000366 3300048927 Bacteria 82591
168 Ga0496126_0212247 3300048929 Bacteria 1629
169 Ga0495678_000738 3300049459 Bacteria 29701
170 Ga0495678_047472 3300049459 Bacteria 1681
171 Ga0501047_0021302 3300049581 Bacteria 6223
172 nmdc:mga0k408_1908_c1 3300050493 Bacteria 11150
173 Ga0500578_0000080 3300053086 Bacteria 106387
174 Ga0500578_0075626 3300053086 Bacteria 2145
175 Ga0500556_0001330 3300053104 Bacteria 10961
176 Ga0500594_0000383 3300053118 Bacteria 9907
177 Ga0500618_000051 3300053125 Bacteria 104272
178 Ga0500618_010984 3300053125 Bacteria 2415
179 Ga0500588_0001825 3300053146 Bacteria 4157
180 Ga0500616_0000037 3300053153 Bacteria 390473
181 Ga0500616_0078243 3300053153 Bacteria 1668
182 Ga0500622_0000021 3300053156 Bacteria 268013
183 Ga0500622_0001440 3300053156 Bacteria 19095
184 Ga0500622_0084471 3300053156 Bacteria 1585
185 Ga0500624_000528 3300053157 Bacteria 10933
186 Ga0500637_0014372 3300053178 Bacteria 4175
187 Ga0500645_000289 3300053730 Bacteria 36194
188 2599478417 2599185184 Bacteria 6430550
189 2738855374 2738541302 Bacteria 5944758
190 2885431849 2885429604 Bacteria 3642894
191 2928080531 2928078545 Bacteria 6534839
192 2928150720 2928147474 Bacteria 6512076
193 2929922938 2929921140 Bacteria 8649150
194 2932083082 2932082852 Bacteria 6563563
195 8003152279 8003151029 Bacteria 8187759
196 Ga0070674_100029050
197 JGI24740J21852_10001177
198 JGI24739J22299_10004736
199 JGI24737J22298_10000230
200 JGI24735J21928_10000004
201 JGI25162J39368_1000056
202 JGI25154J39366_1000001
203 JGI25157J39369_1003862
204 JGI25150J39212_1000080
205 JGI25153J46596_10000025
206 JGI25153J46596_10018410
207 rootH1_10060012
208 rootL2_10013216
209 rootL2_10095077
210 rootL2_10153411
211 rootH1_10014058
212 rootH1_10150900
213 rootH1_10231650
214 JGI25160J50197_1001133
215 JGI25160J50197_1006557
216 Ga0055526_1000311
217 Ga0055526_1021490
218 Ga0055537_1000752
219 Ga0055536_1010691
220 Ga0055528_1000679
221 Ga0055530_10000451
222 Ga0055530_10002541
223 Ga0055540_1002966
224 Ga0055531_10000356
225 Ga0055531_10018143
226 Ga0055543_1003879
227 Ga0065165_1000105
228 Ga0065165_1000307
229 Ga0068853_100104355
230 Ga0070665_100338070
231 Ga0068855_100052221
232 Ga0068854_100229981
233 Ga0075366_10005404
234 Ga0105240_10000117
235 Ga0105240_10000119
236 Ga0105240_10246885
237 Ga0105240_10321690
238 Ga0105241_10151595
239 Ga0105237_10000028
240 Ga0105237_10004377
241 Ga0105237_10014849
242 Ga0105237_10015517
243 Ga0105239_10000161
244 Ga0105239_10001542
245 Ga0105239_10008760
246 Ga0105239_10011362
247 Ga0105239_10012733
248 Ga0105239_10022081
249 Ga0157369_10166828
250 Ga0157374_10000001
251 Ga0157378_10137973
252 Ga0163162_10000108
253 Ga0163162_10004662
254 Ga0157372_10002753
255 Ga0157372_10019356
256 Ga0163163_10104640
257 Ga0157376_10005670
258 Ga0157376_10013796
259 Ga0163161_10004072
260 Ga0163161_10014058
261 Ga0209437_100124
262 Ga0207425_1000027
263 Ga0209646_1000002
264 Ga0209646_1003625
265 Ga0209026_1000229
266 Ga0209129_1005337
267 Ga0209565_1000254
268 Ga0209673_1000034
269 Ga0209676_1004258
270 Ga0209025_1000818
271 Ga0209564_1000670
272 Ga0209564_1001297
273 Ga0209564_1004227
274 Ga0209564_1015669
275 Ga0209758_1000009
276 Ga0209758_1000905
277 Ga0209758_1002092
278 Ga0209758_1011801
279 Ga0209758_1012474
280 Ga0209050_1000005
281 Ga0209050_1000031
282 Ga0209050_1000306
283 Ga0209050_1001344
284 Ga0209050_1005981
285 Ga0207426_1000324
286 Ga0207426_1000558
287 Ga0207426_1005470
288 Ga0207426_1009667
289 Ga0209051_1000525
290 Ga0209051_1049171
291 Ga0209257_1000007
292 Ga0209257_1000073
293 Ga0209257_1000899
294 Ga0209257_1000974
295 Ga0209257_1001362
296 Ga0207695_10000077
297 Ga0207695_10000139
298 Ga0207671_10001361
299 Ga0207671_10002459
300 Ga0207671_10004946
301 Ga0207671_10005688
302 Ga0207667_10016927
303 Ga0207667_10297766
304 Ga0207640_10236965
305 Ga0307517_10005170
306 Ga0307515_10000859
307 Ga0307515_10001800
308 Ga0307511_10001670
309 Ga0307513_10010592
310 Ga0307509_10098079
311 Ga0307516_10000111
312 Ga0307413_10081328
313 Ga0307414_10023956
314 Ga0307510_10005782
315 Ga0439459_0001471
316 Ga0466972_0000012
317 Ga0466972_0051168
318 Ga0466965_0019799
319 Ga0466965_0052675
320 Ga0466957_0000498
321 Ga0466957_0001210
322 Ga0495638_0000007
323 Ga0495638_0000039
324 Ga0495650_0000277
325 Ga0495585_0000058
326 Ga0495585_0000868
327 Ga0495606_0013751
328 Ga0495610_0001048
329 Ga0495610_0007069
330 Ga0495616_0002689
331 Ga0495616_0007678
332 Ga0495637_0001670
333 Ga0495648_0011337
334 Ga0495652_0055136
335 Ga0495609_0064800
336 Ga0495609_0082502
337 Ga0495633_0000620
338 Ga0495668_0000667
339 Ga0495611_0000058
340 Ga0495625_0000009
341 Ga0495625_0000048
342 Ga0495625_0000742
343 Ga0495625_0001618
344 Ga0495625_0005655
345 Ga0495625_0014906
346 Ga0495661_0000812
347 Ga0495661_0005347
348 Ga0495661_0005525
349 Ga0495658_0089432
350 Ga0495649_0000002
351 Ga0495649_0000059
352 Ga0495649_0050417
353 Ga0495672_0001890
354 Ga0495687_001360
355 Ga0495686_0000004
356 Ga0495686_0000052
357 Ga0495686_0000112
358 Ga0495686_0000134
359 Ga0495686_0003179
360 Ga0495686_0004313
361 Ga0495686_0082277
362 Ga0496124_0000366
363 Ga0496126_0212247
364 Ga0495678_000738
365 Ga0495678_047472
366 Ga0501047_0021302
367 nmdc:mga0k408_1908_c1
368 Ga0500578_0000080
369 Ga0500578_0075626
370 Ga0500556_0001330
371 Ga0500594_0000383
372 Ga0500618_000051
373 Ga0500618_010984
374 Ga0500588_0001825
375 Ga0500616_0000037
376 Ga0500616_0078243
377 Ga0500622_0000021
378 Ga0500622_0001440
379 Ga0500622_0084471
380 Ga0500624_000528
381 Ga0500637_0014372
382 Ga0500645_000289
383 2599478417
384 2738855374
385 2885431849
386 2928080531
387 2928150720
388 2929922938
389 2932083082
390 8003152279

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c14-assembly1.cif.gz_A crystal structure of pecam-1 d1d2 domain 0.713 285 371
5gni-assembly1.cif.gz_B the crystal structure of pecam-1 igl1-2 trans-homophilic dimer 0.6997 285 371
2nnc-assembly1.cif.gz_A structure of the sulfur carrier protein soxy from chlorobium limicola f thiosulfatophilum 0.6931 285 370
2nnc-assembly1.cif.gz_B structure of the sulfur carrier protein soxy from chlorobium limicola f thiosulfatophilum 0.6899 285 370
2y7q-assembly1.cif.gz_B the high-affinity complex between ige and its receptor fc epsilon ri 0.6891 282 370
ID Description Score Start End Superfamily
af_F1LX58_391_490_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7594 285 398 2.60.40.10
af_A0A0R4IPM4_36_126_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7416 304 398 2.60.40.10
af_A0A178VNT0_25_128_2.60.40.1110 Mainly Beta;Sandwich;Immunoglobulin-like; 0.7242 323 371 2.60.40.1110
af_X1WHP0_347_512_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7231 282 404 2.60.40.10
af_A0A0G2K2W0_526_620_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7208 313 370 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A2D8W914-F1-model_v4 deleted 0.9895 54 404
AF-A0A2D8W914-F1-model_v4 deleted 0.9867 54 404
AF-A0A318BLZ4-F1-model_v4 deleted 0.9858 62 404
AF-A0A318BLZ4-F1-model_v4 deleted 0.983 62 404
AF-A0A2M6GN32-F1-model_v4 Histidinol-phosphatase 0.9674 177 404

Map