F299844

General Info

Members Datasets Scaffolds Average Seq Length
195 112 390 577

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100115800|Ga0068852_1001158001
Length 609
Sequence LSIFEQMKRFCVFLLLAFFSCTKLFAQATEVELAKQFAANGEQQKALDIYQKLYRQDNDAYYSLYFNSLLGFKKFDEAINITKKMIRRHPGEHQYIIMLGTAYTQQGAVEKADALYDDLVKNLPPDQNEIAMLAAQFYQNANVDYAIKIFQQGRKLLQSDKLFSYELINLYRYKRDKAGLTEEYLNFLPSNPSFISQAENTLSGLFEGAADYDVLKLALLKKIQKDPQQTIYTELLTWQYLQQKEFDQALNQALALSRRKNDDGSDIFELCRTLVANEAYDTAIRGYEYLVSKGKDQQFYIPAKIELINTKNMRVTSGKYTRDDLVSLEKDYLDLLAEFGKSNSTAFAMQKLARLQAFKLHKLDDAQKLLEEAVSLPGLRPALLADCKLDLGDVSLLNNHPWDATLLYSQVEKDYPNTAVGQDAKYRNAKLAYYTGDFTWAKGQLDVLKAATSQLIANDALNLSLLISDNITADSTGALLKIYARADLLIFAEQPEKALLTLDSIDKRFPGNSLSDDILMAKSRLLIQQKEFAGAVPLLKKIAEEHGSSLWADDAVFMLGDIYENHLADKEQAKIYYQKIITDYAGSLWINEARKRFRLLRGDKNETSS

Samples

Sample ID Description Type Environment
1 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
43 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
44 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
70 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
77 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
78 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
79 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
80 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
81 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
82 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
83 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
84 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
85 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
86 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
87 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
88 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
89 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
90 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
91 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
94 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
95 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
96 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
97 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
98 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
99 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
100 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
101 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
102 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
103 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
104 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
105 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
106 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
107 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
108 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
109 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
110 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
111 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
112 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.9
Metatranscriptomes 0
Isolates 4.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.28
Nodule 0
Rhizoplane 0.51
Rhizosphere 78.97
Stem 0
Stem Tuber 0
Unclassified 2.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068852_100115800 3300005616 Bacteria 2444
2 JGI24739J22299_10017492 3300001989 Bacteria 2586
3 JGI24739J22299_10021676 3300001989 Bacteria 2285
4 JGI24737J22298_10000411 3300001990 Bacteria 14666
5 JGI24735J21928_10000007 3300002067 Bacteria 333510
6 JGI25162J39368_1000203 3300002737 Bacteria 62704
7 JGI25162J39368_1002024 3300002737 Bacteria 8954
8 JGI25165J46597_1000657 3300003214 Bacteria 28325
9 rootH1_10064563 3300003316 Bacteria 19914
10 rootH1_10065214 3300003316 Bacteria 7248
11 rootH2_10005722 3300003320 Bacteria 98526
12 rootH2_10131293 3300003320 Bacteria 4589
13 rootH2_10242203 3300003320 Unclassified 3389
14 rootL2_10055173 3300003322 Bacteria 2426
15 rootH1_10004106 3300003323 Bacteria 40486
16 rootH1_10083515 3300003323 Bacteria 9199
17 rootH1_10086820 3300003323 Bacteria 9656
18 rootH1_10271230 3300003323 Bacteria 2906
19 Ga0070658_10000060 3300005327 Bacteria 112561
20 Ga0070658_10160523 3300005327 Bacteria 1886
21 Ga0070680_100110328 3300005336 Bacteria 2290
22 Ga0070673_100021351 3300005364 Bacteria 4692
23 Ga0070659_100000199 3300005366 Bacteria 46342
24 Ga0070659_100037413 3300005366 Bacteria 3783
25 Ga0070678_100017254 3300005456 Bacteria 4643
26 Ga0070681_10011622 3300005458 Bacteria 8716
27 Ga0068867_100001240 3300005459 Bacteria 17574
28 Ga0068853_100021635 3300005539 Bacteria 5365
29 Ga0068853_100022741 3300005539 Bacteria 5240
30 Ga0070665_100000264 3300005548 Bacteria 85867
31 Ga0068855_100000074 3300005563 Bacteria 119759
32 Ga0068855_100000149 3300005563 Bacteria 89273
33 Ga0068855_100006331 3300005563 Bacteria 14426
34 Ga0068855_100139526 3300005563 Bacteria 2765
35 Ga0068856_100000120 3300005614 Bacteria 78280
36 Ga0068856_100001959 3300005614 Bacteria 21441
37 Ga0068856_100085856 3300005614 Bacteria 3127
38 Ga0068856_100154686 3300005614 Bacteria 2303
39 Ga0068852_100000389 3300005616 Bacteria 29439
40 Ga0075366_10000344 3300006195 Bacteria 21320
41 Ga0075366_10005962 3300006195 Bacteria 6634
42 Ga0097621_100000232 3300006237 Bacteria 37391
43 Ga0068871_100000800 3300006358 Bacteria 21155
44 Ga0068865_100003071 3300006881 Bacteria 9985
45 Ga0105240_10000371 3300009093 Bacteria 84390
46 Ga0105240_10062325 3300009093 Bacteria 4643
47 Ga0105240_10065863 3300009093 Bacteria 4496
48 Ga0105240_10089248 3300009093 Bacteria 3771
49 Ga0105240_10107330 3300009093 Bacteria 3385
50 Ga0105241_10000733 3300009174 Bacteria 24893
51 Ga0105241_10001408 3300009174 Bacteria 18413
52 Ga0105242_10042169 3300009176 Bacteria 3683
53 Ga0105237_10000535 3300009545 Bacteria 53620
54 Ga0105237_10000632 3300009545 Bacteria 49178
55 Ga0105237_10000794 3300009545 Bacteria 43200
56 Ga0105237_10003574 3300009545 Bacteria 18410
57 Ga0105237_10021894 3300009545 Bacteria 6565
58 Ga0105238_10000612 3300009551 Bacteria 37482
59 Ga0105239_10000049 3300010375 Bacteria 177578
60 Ga0105239_10000086 3300010375 Bacteria 129798
61 Ga0105239_10000478 3300010375 Bacteria 58328
62 Ga0105239_10001768 3300010375 Bacteria 28424
63 Ga0105239_10002795 3300010375 Bacteria 21842
64 Ga0105239_10029505 3300010375 Bacteria 6030
65 Ga0105239_10038445 3300010375 Bacteria 5244
66 Ga0157373_10000203 3300013100 Bacteria 49252
67 Ga0157373_10002483 3300013100 Bacteria 14049
68 Ga0157371_10017211 3300013102 Bacteria 5374
69 Ga0157369_10003292 3300013105 Bacteria 19216
70 Ga0157369_10028064 3300013105 Bacteria 6233
71 Ga0157374_10005433 3300013296 Bacteria 10705
72 Ga0157378_10005776 3300013297 Bacteria 10842
73 Ga0157378_10032134 3300013297 Bacteria 4636
74 Ga0163162_10000008 3300013306 Bacteria 316194
75 Ga0163162_10001653 3300013306 Bacteria 20900
76 Ga0163162_10016907 3300013306 Bacteria 7132
77 Ga0157372_10000190 3300013307 Bacteria 67909
78 Ga0157372_10000404 3300013307 Bacteria 47383
79 Ga0157372_10002106 3300013307 Bacteria 21657
80 Ga0157372_10005558 3300013307 Bacteria 13400
81 Ga0157372_10008722 3300013307 Bacteria 10768
82 Ga0157375_10001485 3300013308 Bacteria 20130
83 Ga0163161_10018094 3300017792 Bacteria 4940
84 Ga0207427_100131 3300025231 Bacteria 93947
85 Ga0209437_100048 3300025233 Bacteria 405107
86 Ga0209437_100102 3300025233 Bacteria 224216
87 Ga0209026_1000625 3300025250 Bacteria 22243
88 Ga0209233_1000029 3300025261 Bacteria 641642
89 Ga0209233_1000520 3300025261 Bacteria 22249
90 Ga0209233_1003726 3300025261 Bacteria 5325
91 Ga0209455_1003656 3300025272 Bacteria 5332
92 Ga0207647_10000588 3300025904 Bacteria 28282
93 Ga0207645_10000948 3300025907 Bacteria 24090
94 Ga0207705_10000233 3300025909 Bacteria 55125
95 Ga0207705_10115843 3300025909 Bacteria 1984
96 Ga0207654_10019415 3300025911 Bacteria 3587
97 Ga0207654_10021298 3300025911 Bacteria 3446
98 Ga0207707_10007508 3300025912 Bacteria 9501
99 Ga0207695_10000142 3300025913 Bacteria 214715
100 Ga0207695_10002312 3300025913 Bacteria 28435
101 Ga0207695_10009569 3300025913 Bacteria 11975
102 Ga0207695_10046308 3300025913 Bacteria 4611
103 Ga0207695_10081898 3300025913 Bacteria 3265
104 Ga0207671_10000110 3300025914 Bacteria 126480
105 Ga0207671_10000888 3300025914 Bacteria 37881
106 Ga0207671_10002963 3300025914 Bacteria 17464
107 Ga0207671_10007886 3300025914 Bacteria 9142
108 Ga0207671_10013464 3300025914 Bacteria 6511
109 Ga0207660_10003190 3300025917 Bacteria 10727
110 Ga0207652_10005623 3300025921 Bacteria 10170
111 Ga0207694_10035499 3300025924 Bacteria 3825
112 Ga0207644_10003629 3300025931 Bacteria 10008
113 Ga0207690_10000744 3300025932 Bacteria 21044
114 Ga0207690_10024235 3300025932 Bacteria 3799
115 Ga0207686_10046205 3300025934 Bacteria 2684
116 Ga0207704_10000015 3300025938 Bacteria 163572
117 Ga0207667_10000014 3300025949 Bacteria 421261
118 Ga0207667_10000496 3300025949 Bacteria 51954
119 Ga0207667_10049948 3300025949 Bacteria 4414
120 Ga0207667_10085743 3300025949 Bacteria 3260
121 Ga0207667_10183368 3300025949 Bacteria 2149
122 Ga0207702_10000195 3300026078 Bacteria 71757
123 Ga0207702_10014909 3300026078 Bacteria 6446
124 Ga0207702_10116794 3300026078 Bacteria 2381
125 Ga0207648_10009896 3300026089 Bacteria 9088
126 Ga0207683_10006713 3300026121 Bacteria 9846
127 Ga0207698_10008186 3300026142 Bacteria 6592
128 Ga0207698_10048539 3300026142 Bacteria 3224
129 Ga0268266_10000268 3300028379 Bacteria 85976
130 Ga0307517_10000207 3300028786 Bacteria 99774
131 Ga0307515_10001810 3300028794 Bacteria 47689
132 Ga0307515_10002270 3300028794 Bacteria 42110
133 Ga0265338_10038571 3300028800 Bacteria 4523
134 Ga0307412_10057053 3300031911 Unclassified 2605
135 Ga0307507_10000184 3300033179 Bacteria 114646
136 Ga0395899_0000027 3300037312 Bacteria 337387
137 Ga0395899_0015833 3300037312 Bacteria 5750
138 Ga0395899_0018268 3300037312 Bacteria 5333
139 Ga0395900_0002139 3300037418 Bacteria 22114
140 Ga0395900_0020304 3300037418 Bacteria 6781
141 Ga0395900_0027778 3300037418 Bacteria 5798
142 Ga0395898_0100356 3300037466 Bacteria 2780
143 Ga0395905_0000729 3300037471 Bacteria 43376
144 Ga0395901_0008129 3300038443 Bacteria 10595
145 Ga0436361_0119312 3300039447 Bacteria 8974
146 Ga0495651_0025969 3300046462 Bacteria 4560
147 Ga0495650_0000081 3300046471 Bacteria 240957
148 Ga0495585_0000036 3300046492 Bacteria 135914
149 Ga0495585_0000642 3300046492 Bacteria 32168
150 Ga0495596_0008437 3300046500 Unclassified 4585
151 Ga0495606_0000034 3300046507 Bacteria 247705
152 Ga0495606_0009021 3300046507 Bacteria 8523
153 Ga0495606_0029988 3300046507 Bacteria 3809
154 Ga0495610_0001483 3300046512 Bacteria 20663
155 Ga0495616_0002978 3300046513 Bacteria 10999
156 Ga0495616_0007205 3300046513 Bacteria 6666
157 Ga0495631_0009057 3300046518 Unclassified 4986
158 Ga0495644_0009259 3300046523 Bacteria 3795
159 Ga0495652_0021683 3300046529 Bacteria 5709
160 Ga0495609_0010687 3300046538 Bacteria 4394
161 Ga0495633_0000026 3300046558 Bacteria 204722
162 Ga0495633_0047288 3300046558 Bacteria 2033
163 Ga0495668_0000054 3300046616 Bacteria 203960
164 Ga0495625_0000049 3300046660 Bacteria 197646
165 Ga0495625_0000168 3300046660 Bacteria 102626
166 Ga0495625_0004837 3300046660 Bacteria 12573
167 Ga0495661_0000919 3300046665 Bacteria 26956
168 Ga0495661_0015961 3300046665 Bacteria 4995
169 Ga0495649_0000014 3300046694 Bacteria 287408
170 Ga0495660_0028629 3300046810 Bacteria 3145
171 Ga0495687_003250 3300047443 Bacteria 11988
172 Ga0495677_0013314 3300047445 Bacteria 2993
173 Ga0495686_0000319 3300047472 Bacteria 79929
174 Ga0495686_0000524 3300047472 Bacteria 55256
175 Ga0495686_0014711 3300047472 Bacteria 5378
176 Ga0495686_0033537 3300047472 Bacteria 3314
177 Ga0495678_002573 3300049459 Bacteria 12146
178 nmdc:mga0k408_281_c2 3300050493 Bacteria 21573
179 nmdc:mga0k408_81_c1 3300050493 Bacteria 45236
180 Ga0500635_0002976 3300053080 Bacteria 4220
181 Ga0500635_0006671 3300053080 Bacteria 3091
182 Ga0500608_000282 3300053122 Bacteria 19738
183 Ga0500608_009739 3300053122 Bacteria 4094
184 Ga0500618_000016 3300053125 Bacteria 164049
185 Ga0500642_0001849 3300053130 Bacteria 6108
186 Ga0500622_0000430 3300053156 Bacteria 39891
187 Ga0500624_000992 3300053157 Bacteria 5742
188 2599479778 2599185184 Bacteria 6430550
189 2852627171 2852623160 Bacteria 4376875
190 2884935892 2884933994 Bacteria 4535041
191 2919440289 2919437846 Bacteria 6199444
192 2928083663 2928078545 Bacteria 6534839
193 2928152105 2928147474 Bacteria 6512076
194 2932086997 2932082852 Bacteria 6563563
195 2977235654 2977232053 Bacteria 5485925
196 Ga0068852_100115800
197 JGI24739J22299_10017492
198 JGI24739J22299_10021676
199 JGI24737J22298_10000411
200 JGI24735J21928_10000007
201 JGI25162J39368_1000203
202 JGI25162J39368_1002024
203 JGI25165J46597_1000657
204 rootH1_10064563
205 rootH1_10065214
206 rootH2_10005722
207 rootH2_10131293
208 rootH2_10242203
209 rootL2_10055173
210 rootH1_10004106
211 rootH1_10083515
212 rootH1_10086820
213 rootH1_10271230
214 Ga0070658_10000060
215 Ga0070658_10160523
216 Ga0070680_100110328
217 Ga0070673_100021351
218 Ga0070659_100000199
219 Ga0070659_100037413
220 Ga0070678_100017254
221 Ga0070681_10011622
222 Ga0068867_100001240
223 Ga0068853_100021635
224 Ga0068853_100022741
225 Ga0070665_100000264
226 Ga0068855_100000074
227 Ga0068855_100000149
228 Ga0068855_100006331
229 Ga0068855_100139526
230 Ga0068856_100000120
231 Ga0068856_100001959
232 Ga0068856_100085856
233 Ga0068856_100154686
234 Ga0068852_100000389
235 Ga0075366_10000344
236 Ga0075366_10005962
237 Ga0097621_100000232
238 Ga0068871_100000800
239 Ga0068865_100003071
240 Ga0105240_10000371
241 Ga0105240_10062325
242 Ga0105240_10065863
243 Ga0105240_10089248
244 Ga0105240_10107330
245 Ga0105241_10000733
246 Ga0105241_10001408
247 Ga0105242_10042169
248 Ga0105237_10000535
249 Ga0105237_10000632
250 Ga0105237_10000794
251 Ga0105237_10003574
252 Ga0105237_10021894
253 Ga0105238_10000612
254 Ga0105239_10000049
255 Ga0105239_10000086
256 Ga0105239_10000478
257 Ga0105239_10001768
258 Ga0105239_10002795
259 Ga0105239_10029505
260 Ga0105239_10038445
261 Ga0157373_10000203
262 Ga0157373_10002483
263 Ga0157371_10017211
264 Ga0157369_10003292
265 Ga0157369_10028064
266 Ga0157374_10005433
267 Ga0157378_10005776
268 Ga0157378_10032134
269 Ga0163162_10000008
270 Ga0163162_10001653
271 Ga0163162_10016907
272 Ga0157372_10000190
273 Ga0157372_10000404
274 Ga0157372_10002106
275 Ga0157372_10005558
276 Ga0157372_10008722
277 Ga0157375_10001485
278 Ga0163161_10018094
279 Ga0207427_100131
280 Ga0209437_100048
281 Ga0209437_100102
282 Ga0209026_1000625
283 Ga0209233_1000029
284 Ga0209233_1000520
285 Ga0209233_1003726
286 Ga0209455_1003656
287 Ga0207647_10000588
288 Ga0207645_10000948
289 Ga0207705_10000233
290 Ga0207705_10115843
291 Ga0207654_10019415
292 Ga0207654_10021298
293 Ga0207707_10007508
294 Ga0207695_10000142
295 Ga0207695_10002312
296 Ga0207695_10009569
297 Ga0207695_10046308
298 Ga0207695_10081898
299 Ga0207671_10000110
300 Ga0207671_10000888
301 Ga0207671_10002963
302 Ga0207671_10007886
303 Ga0207671_10013464
304 Ga0207660_10003190
305 Ga0207652_10005623
306 Ga0207694_10035499
307 Ga0207644_10003629
308 Ga0207690_10000744
309 Ga0207690_10024235
310 Ga0207686_10046205
311 Ga0207704_10000015
312 Ga0207667_10000014
313 Ga0207667_10000496
314 Ga0207667_10049948
315 Ga0207667_10085743
316 Ga0207667_10183368
317 Ga0207702_10000195
318 Ga0207702_10014909
319 Ga0207702_10116794
320 Ga0207648_10009896
321 Ga0207683_10006713
322 Ga0207698_10008186
323 Ga0207698_10048539
324 Ga0268266_10000268
325 Ga0307517_10000207
326 Ga0307515_10001810
327 Ga0307515_10002270
328 Ga0265338_10038571
329 Ga0307412_10057053
330 Ga0307507_10000184
331 Ga0395899_0000027
332 Ga0395899_0015833
333 Ga0395899_0018268
334 Ga0395900_0002139
335 Ga0395900_0020304
336 Ga0395900_0027778
337 Ga0395898_0100356
338 Ga0395905_0000729
339 Ga0395901_0008129
340 Ga0436361_0119312
341 Ga0495651_0025969
342 Ga0495650_0000081
343 Ga0495585_0000036
344 Ga0495585_0000642
345 Ga0495596_0008437
346 Ga0495606_0000034
347 Ga0495606_0009021
348 Ga0495606_0029988
349 Ga0495610_0001483
350 Ga0495616_0002978
351 Ga0495616_0007205
352 Ga0495631_0009057
353 Ga0495644_0009259
354 Ga0495652_0021683
355 Ga0495609_0010687
356 Ga0495633_0000026
357 Ga0495633_0047288
358 Ga0495668_0000054
359 Ga0495625_0000049
360 Ga0495625_0000168
361 Ga0495625_0004837
362 Ga0495661_0000919
363 Ga0495661_0015961
364 Ga0495649_0000014
365 Ga0495660_0028629
366 Ga0495687_003250
367 Ga0495677_0013314
368 Ga0495686_0000319
369 Ga0495686_0000524
370 Ga0495686_0014711
371 Ga0495686_0033537
372 Ga0495678_002573
373 nmdc:mga0k408_281_c2
374 nmdc:mga0k408_81_c1
375 Ga0500635_0002976
376 Ga0500635_0006671
377 Ga0500608_000282
378 Ga0500608_009739
379 Ga0500618_000016
380 Ga0500642_0001849
381 Ga0500622_0000430
382 Ga0500624_000992
383 2599479778
384 2852627171
385 2884935892
386 2919440289
387 2928083663
388 2928152105
389 2932086997
390 2977235654

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13174

TPR_6

Tetratricopeptide repeat

554

587

0.96

PF14559

TPR_19

Tetratricopeptide repeat

69

137

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6w5q-assembly8.cif.gz_H structure of the globular c-terminal domain of p. aeruginosa lpop 0.8489 301 411
7b1u-assembly1.cif.gz_A crystal structure of a shortened ipgc variant in complex with 3-(3,4-difluorophenyl)-1h,4h,6h,7h-imidazo[2,1-c][1,2,4]triazine 0.8249 287 428
2nc9-assembly1.cif.gz_A apo solution structure of hop tpr2a 0.8164 301 437
7o6s-assembly1.cif.gz_A crystal structure of a shortened ipgc variant in complex with n-(2h-1,3-benzodioxol-5-ylmethyl)cyclopentanamine 0.8141 287 424
2xcc-assembly1.cif.gz_B crystal structure of pcrh from pseudomonas aeruginosa 0.8076 340 468
ID Description Score Start End Superfamily
af_I1KC83_194_309_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8917 319 431 1.25.40.10
af_K7KL29_204_311_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8822 322 436 1.25.40.10
4gz3C01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8796 329 418 1.25.40.10
af_C4J723_179_292_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8755 322 438 1.25.40.10
4gz6A01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.869 300 418 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A258KCM0-F1-model_v4 Uncharacterized protein 0.9509 53 429
AF-A0A520CAL6-F1-model_v4 Tetratricopeptide repeat protein 0.9508 156 516
AF-A0A3M1LDQ5-F1-model_v4 Tetratricopeptide repeat protein 0.9421 181 587
AF-A0A4V1SN28-F1-model_v4 deleted 0.9419 179 587
AF-A0A4V1ZZY1-F1-model_v4 Tetratricopeptide repeat protein 0.9415 17 588 GO:0016020

Map