F300640

General Info

Members Datasets Scaffolds Average Seq Length
195 150 390 353

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0074931|Ga0496115_0074931_1334_2506
Length 390
Sequence MKALVYSGPGDMSWREVPLPVIQHPTDVIVKMEATTICGTDLHILKGDVPEVESGRILGHEGVGVITELGSGVTRLSVGDRVIVSCISSCGRCENCRAGLYSHCLDPEGAAGIGWILGHLIDGTQAEYVRIPFGENSLYKVPAGVSDAEAVLLSDILPTGFEIGVQYGQVKPGDVVAVIGSGPVGLAAVMTSRLYGPSKTIAIDVDAARLRRASAFGATDTVNSGDADWKEQVLALTDGAGVDVAIEAVGIPRTFTMATEIVRPGGHVANVGVHGKPVDLALNQLWIANITISTGLVNTNTLGMLLKLVTQRALPADAFVTHEFTFDEVEGAYEVFGNAAEHDALKVLIHDGPRLLEPAAGAGAASAQDLAEKIYIEGMERFNHPGEVFS

Samples

Sample ID Description Type Environment
1 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
57 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
85 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
86 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
102 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
108 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 2808606372 Agromyces sp. 23-23 Isolate Unclassified
143 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
144 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
145 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
146 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
147 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
148 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
149 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
150 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.87
Metatranscriptomes 0.51
Isolates 4.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.08
Nodule 0
Rhizoplane 6.15
Rhizosphere 83.08
Stem 0
Stem Tuber 0
Unclassified 2.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496115_0074931 3300048918 Bacteria 2748
2 rootH2_10007197 3300003320 Bacteria 152995
3 rootH1_10243393 3300003323 Bacteria 2178
4 Ga0065714_10094985 3300005288 Bacteria 1775
5 Ga0070658_10000090 3300005327 Bacteria 81871
6 Ga0070658_10000092 3300005327 Bacteria 81151
7 Ga0070658_10091240 3300005327 Bacteria 2510
8 Ga0070666_10129304 3300005335 Bacteria 1754
9 Ga0070682_100076141 3300005337 Bacteria 2159
10 Ga0070660_100091941 3300005339 Bacteria 2394
11 Ga0070660_100158666 3300005339 Bacteria 1822
12 Ga0070675_100287581 3300005354 Bacteria 1446
13 Ga0070714_100000008 3300005435 Bacteria 278734
14 Ga0070710_10093519 3300005437 Bacteria 1777
15 Ga0070701_10005957 3300005438 Bacteria 5090
16 Ga0070705_100114256 3300005440 Bacteria 1731
17 Ga0070700_100000147 3300005441 Bacteria 41728
18 Ga0070700_100004576 3300005441 Bacteria 7239
19 Ga0070662_100005744 3300005457 Bacteria 7949
20 Ga0070681_10257875 3300005458 Bacteria 1656
21 Ga0070685_10001305 3300005466 Bacteria 13138
22 Ga0068853_100020588 3300005539 Bacteria 5487
23 Ga0068853_100115912 3300005539 Bacteria 2385
24 Ga0068853_100191406 3300005539 Unclassified 1859
25 Ga0070672_100194151 3300005543 Bacteria 1696
26 Ga0070686_100005317 3300005544 Bacteria 7121
27 Ga0070665_100000003 3300005548 Bacteria 811857
28 Ga0068855_100136556 3300005563 Bacteria 2798
29 Ga0068855_100338769 3300005563 Bacteria 1659
30 Ga0070664_100048977 3300005564 Bacteria 3573
31 Ga0070664_100129436 3300005564 Bacteria 2216
32 Ga0068857_100048116 3300005577 Bacteria 3786
33 Ga0068856_100000915 3300005614 Bacteria 31569
34 Ga0068856_100124745 3300005614 Bacteria 2578
35 Ga0070702_100110232 3300005615 Bacteria 1705
36 Ga0075368_10057235 3300006042 Bacteria 1556
37 Ga0075367_10109527 3300006178 Bacteria 1694
38 Ga0068865_100024536 3300006881 Bacteria 3957
39 Ga0105240_10006692 3300009093 Bacteria 16900
40 Ga0105245_10018355 3300009098 Bacteria 6116
41 Ga0105245_10075323 3300009098 Bacteria 3072
42 Ga0105243_10216374 3300009148 Bacteria 1690
43 Ga0105241_10034728 3300009174 Bacteria 3790
44 Ga0105241_10121973 3300009174 Bacteria 2100
45 Ga0105237_10006548 3300009545 Bacteria 12885
46 Ga0105237_10322712 3300009545 Bacteria 1548
47 Ga0105238_10069093 3300009551 Bacteria 3533
48 Ga0105238_10464897 3300009551 Bacteria 1263
49 Ga0105249_10002799 3300009553 Bacteria 15060
50 Ga0105239_10001038 3300010375 Bacteria 38709
51 Ga0105239_10065025 3300010375 Bacteria 4005
52 Ga0105239_10079758 3300010375 Bacteria 3602
53 Ga0105246_10157480 3300011119 Bacteria 1727
54 Ga0157373_10115182 3300013100 Unclassified 1890
55 Ga0157371_10001014 3300013102 Bacteria 30952
56 Ga0157370_10021569 3300013104 Bacteria 6418
57 Ga0157370_10105522 3300013104 Bacteria 2637
58 Ga0157370_10165976 3300013104 Bacteria 2053
59 Ga0157369_10028877 3300013105 Bacteria 6135
60 Ga0157369_10363154 3300013105 Bacteria 1503
61 Ga0157374_10053404 3300013296 Bacteria 3767
62 Ga0157378_10128474 3300013297 Bacteria 2343
63 Ga0163162_10000118 3300013306 Bacteria 69834
64 Ga0163162_10009668 3300013306 Bacteria 9379
65 Ga0163162_10415515 3300013306 Bacteria 1477
66 Ga0157372_10000132 3300013307 Bacteria 82054
67 Ga0157372_10002063 3300013307 Bacteria 21836
68 Ga0157372_10056628 3300013307 Bacteria 4380
69 Ga0157375_10050775 3300013308 Bacteria 4069
70 Ga0163163_10019957 3300014325 Bacteria 6305
71 Ga0163163_10292050 3300014325 Bacteria 1682
72 Ga0157380_10073487 3300014326 Bacteria 2772
73 Ga0157377_10006769 3300014745 Bacteria 5491
74 Ga0157377_10051220 3300014745 Unclassified 2328
75 Ga0157376_10096637 3300014969 Bacteria 2571
76 Ga0182005_1000133 3300015265 Bacteria 53219
77 Ga0163161_10011761 3300017792 Bacteria 6068
78 Ga0163161_10063998 3300017792 Bacteria 2682
79 Ga0206354_10816915 3300020081 Bacteria 2417
80 Ga0213875_10002125 3300021388 Bacteria 12131
81 Ga0209646_1001027 3300025246 Bacteria 8447
82 Ga0209455_1006425 3300025272 Bacteria 3471
83 Ga0207692_10072497 3300025898 Bacteria 1819
84 Ga0207647_10057835 3300025904 Bacteria 2376
85 Ga0207705_10000006 3300025909 Bacteria 657147
86 Ga0207705_10000508 3300025909 Bacteria 33080
87 Ga0207705_10234415 3300025909 Bacteria 1397
88 Ga0207654_10004328 3300025911 Bacteria 7159
89 Ga0207707_10099680 3300025912 Bacteria 2539
90 Ga0207695_10001804 3300025913 Bacteria 33797
91 Ga0207671_10039341 3300025914 Bacteria 3502
92 Ga0207657_10198523 3300025919 Unclassified 1615
93 Ga0207657_10223921 3300025919 Bacteria 1506
94 Ga0207694_10055306 3300025924 Bacteria 3081
95 Ga0207659_10127414 3300025926 Bacteria 1960
96 Ga0207659_10154746 3300025926 Bacteria 1794
97 Ga0207687_10051468 3300025927 Bacteria 2871
98 Ga0207664_10000002 3300025929 Bacteria 657053
99 Ga0207706_10000725 3300025933 Bacteria 34447
100 Ga0207706_10102133 3300025933 Bacteria 2523
101 Ga0207679_10194577 3300025945 Bacteria 1689
102 Ga0207667_10193243 3300025949 Bacteria 2088
103 Ga0207712_10010742 3300025961 Bacteria 5820
104 Ga0207668_10349606 3300025972 Bacteria 1236
105 Ga0207677_10051103 3300026023 Bacteria 2801
106 Ga0207639_10031152 3300026041 Bacteria 3918
107 Ga0207639_10091775 3300026041 Bacteria 2432
108 Ga0207708_10000019 3300026075 Bacteria 187745
109 Ga0207708_10016591 3300026075 Bacteria 5540
110 Ga0207702_10007961 3300026078 Bacteria 8980
111 Ga0207702_10097319 3300026078 Bacteria 2590
112 Ga0207676_10167429 3300026095 Bacteria 1911
113 Ga0207674_10070681 3300026116 Bacteria 3510
114 Ga0207683_10281104 3300026121 Bacteria 1521
115 Ga0207683_10349080 3300026121 Bacteria 1358
116 Ga0207698_10129382 3300026142 Bacteria 2154
117 Ga0268266_10000078 3300028379 Bacteria 213632
118 Ga0307509_10007359 3300031507 Bacteria 14420
119 Ga0265342_10181337 3300031712 Bacteria 1153
120 Ga0307405_10027023 3300031731 Bacteria 3321
121 Ga0307405_10238025 3300031731 Bacteria 1346
122 Ga0307406_10316602 3300031901 Bacteria 1205
123 Ga0307412_10117180 3300031911 Bacteria 1912
124 Ga0307409_100060845 3300031995 Bacteria 2947
125 Ga0307416_100019792 3300032002 Bacteria 4782
126 Ga0307415_100058999 3300032126 Bacteria 2644
127 Ga0307510_10000107 3300033180 Bacteria 65945
128 Ga0395899_0004977 3300037312 Bacteria 10340
129 Ga0395900_0000557 3300037418 Bacteria 51834
130 Ga0395900_0002940 3300037418 Bacteria 18561
131 Ga0436364_1343911 3300037853 Bacteria 54356
132 Ga0395901_0081642 3300038443 Bacteria 3377
133 Ga0395901_0206401 3300038443 Bacteria 2058
134 Ga0436361_0484294 3300039447 Bacteria 8061
135 Ga0439434_0029680 3300042435 Bacteria 1658
136 Ga0451577_0000668 3300042876 Bacteria 53985
137 Ga0453684_0001916 3300044712 Bacteria 53942
138 Ga0495617_006262 3300046452 Bacteria 4182
139 Ga0495603_0001880 3300046455 Bacteria 12386
140 Ga0495638_0014876 3300046460 Bacteria 5243
141 Ga0495585_0004755 3300046492 Bacteria 8740
142 Ga0495594_0015765 3300046499 Bacteria 3974
143 Ga0495652_0062556 3300046529 Bacteria 3138
144 Ga0495622_0002062 3300046557 Bacteria 9820
145 Ga0495625_0000009 3300046660 Bacteria 404954
146 Ga0495657_0030344 3300046675 Bacteria 3787
147 Ga0495657_0159143 3300046675 Bacteria 1398
148 Ga0495613_0032492 3300046689 Bacteria 3877
149 Ga0495604_0265646 3300047317 Bacteria 1165
150 Ga0495674_0010672 3300047319 Bacteria 8692
151 Ga0495674_0250484 3300047319 Unclassified 1458
152 Ga0495683_0001104 3300047323 Bacteria 18634
153 Ga0495687_021258 3300047443 Bacteria 3144
154 Ga0495687_021802 3300047443 Bacteria 3088
155 Ga0495686_0031016 3300047472 Bacteria 3469
156 Ga0496104_0075150 3300048907 Bacteria 3217
157 Ga0496105_0046401 3300048908 Bacteria 3586
158 Ga0496105_0198636 3300048908 Bacteria 1637
159 Ga0496106_0248320 3300048909 Bacteria 1422
160 Ga0496108_0032437 3300048911 Bacteria 4338
161 Ga0496108_0053507 3300048911 Bacteria 3386
162 Ga0496109_0018953 3300048912 Bacteria 6058
163 Ga0496109_0019606 3300048912 Bacteria 5966
164 Ga0496110_0007519 3300048913 Bacteria 8704
165 Ga0496110_0338955 3300048913 Bacteria 1370
166 Ga0496111_0011468 3300048914 Bacteria 5971
167 Ga0501032_0048555 3300049569 Bacteria 2865
168 Ga0501034_0007356 3300049571 Bacteria 11727
169 Ga0501036_0001207 3300049572 Bacteria 19727
170 Ga0501037_0011316 3300049573 Bacteria 6567
171 Ga0501038_0044418 3300049574 Bacteria 3860
172 Ga0501039_0025032 3300049575 Bacteria 4584
173 Ga0501042_0084731 3300049578 Bacteria 2273
174 Ga0501046_0002096 3300049580 Bacteria 18898
175 Ga0501047_0000092 3300049581 Bacteria 111389
176 Ga0501047_0197470 3300049581 Bacteria 1873
177 Ga0501048_0200344 3300049582 Bacteria 1415
178 Ga0501070_0196785 3300049586 Bacteria 1655
179 Ga0501035_0029332 3300049822 Bacteria 5016
180 Ga0501044_0334771 3300049823 Bacteria 1435
181 Ga0501045_0053151 3300049824 Bacteria 2960
182 nmdc:mga0yw44_77246_c1 3300050492 Bacteria 2080
183 nmdc:mga06z11_123871_c1 3300050494 Bacteria 1445
184 Ga0495619_0035756 3300053085 Bacteria 3232
185 Ga0500590_031309 3300053148 Bacteria 2758
186 Ga0501082_0005445 3300060353 Bacteria 11052
187 2808899732 2808606372 Bacteria 4649509
188 2809196847 2808606439 Bacteria 5952208
189 2811846531 2808606982 Bacteria 7791042
190 2812323958 2811994872 Bacteria 4121241
191 2819578334 2818991442 Bacteria 8318214
192 2862515957 2862507626 Bacteria 9425308
193 2884995600 2884994152 Bacteria 4492978
194 3006428277 3006425503 Bacteria 6491253
195 8048411338 8048406513 Bacteria 8936924
196 Ga0496115_0074931
197 rootH2_10007197
198 rootH1_10243393
199 Ga0065714_10094985
200 Ga0070658_10000090
201 Ga0070658_10000092
202 Ga0070658_10091240
203 Ga0070666_10129304
204 Ga0070682_100076141
205 Ga0070660_100091941
206 Ga0070660_100158666
207 Ga0070675_100287581
208 Ga0070714_100000008
209 Ga0070710_10093519
210 Ga0070701_10005957
211 Ga0070705_100114256
212 Ga0070700_100000147
213 Ga0070700_100004576
214 Ga0070662_100005744
215 Ga0070681_10257875
216 Ga0070685_10001305
217 Ga0068853_100020588
218 Ga0068853_100115912
219 Ga0068853_100191406
220 Ga0070672_100194151
221 Ga0070686_100005317
222 Ga0070665_100000003
223 Ga0068855_100136556
224 Ga0068855_100338769
225 Ga0070664_100048977
226 Ga0070664_100129436
227 Ga0068857_100048116
228 Ga0068856_100000915
229 Ga0068856_100124745
230 Ga0070702_100110232
231 Ga0075368_10057235
232 Ga0075367_10109527
233 Ga0068865_100024536
234 Ga0105240_10006692
235 Ga0105245_10018355
236 Ga0105245_10075323
237 Ga0105243_10216374
238 Ga0105241_10034728
239 Ga0105241_10121973
240 Ga0105237_10006548
241 Ga0105237_10322712
242 Ga0105238_10069093
243 Ga0105238_10464897
244 Ga0105249_10002799
245 Ga0105239_10001038
246 Ga0105239_10065025
247 Ga0105239_10079758
248 Ga0105246_10157480
249 Ga0157373_10115182
250 Ga0157371_10001014
251 Ga0157370_10021569
252 Ga0157370_10105522
253 Ga0157370_10165976
254 Ga0157369_10028877
255 Ga0157369_10363154
256 Ga0157374_10053404
257 Ga0157378_10128474
258 Ga0163162_10000118
259 Ga0163162_10009668
260 Ga0163162_10415515
261 Ga0157372_10000132
262 Ga0157372_10002063
263 Ga0157372_10056628
264 Ga0157375_10050775
265 Ga0163163_10019957
266 Ga0163163_10292050
267 Ga0157380_10073487
268 Ga0157377_10006769
269 Ga0157377_10051220
270 Ga0157376_10096637
271 Ga0182005_1000133
272 Ga0163161_10011761
273 Ga0163161_10063998
274 Ga0206354_10816915
275 Ga0213875_10002125
276 Ga0209646_1001027
277 Ga0209455_1006425
278 Ga0207692_10072497
279 Ga0207647_10057835
280 Ga0207705_10000006
281 Ga0207705_10000508
282 Ga0207705_10234415
283 Ga0207654_10004328
284 Ga0207707_10099680
285 Ga0207695_10001804
286 Ga0207671_10039341
287 Ga0207657_10198523
288 Ga0207657_10223921
289 Ga0207694_10055306
290 Ga0207659_10127414
291 Ga0207659_10154746
292 Ga0207687_10051468
293 Ga0207664_10000002
294 Ga0207706_10000725
295 Ga0207706_10102133
296 Ga0207679_10194577
297 Ga0207667_10193243
298 Ga0207712_10010742
299 Ga0207668_10349606
300 Ga0207677_10051103
301 Ga0207639_10031152
302 Ga0207639_10091775
303 Ga0207708_10000019
304 Ga0207708_10016591
305 Ga0207702_10007961
306 Ga0207702_10097319
307 Ga0207676_10167429
308 Ga0207674_10070681
309 Ga0207683_10281104
310 Ga0207683_10349080
311 Ga0207698_10129382
312 Ga0268266_10000078
313 Ga0307509_10007359
314 Ga0265342_10181337
315 Ga0307405_10027023
316 Ga0307405_10238025
317 Ga0307406_10316602
318 Ga0307412_10117180
319 Ga0307409_100060845
320 Ga0307416_100019792
321 Ga0307415_100058999
322 Ga0307510_10000107
323 Ga0395899_0004977
324 Ga0395900_0000557
325 Ga0395900_0002940
326 Ga0436364_1343911
327 Ga0395901_0081642
328 Ga0395901_0206401
329 Ga0436361_0484294
330 Ga0439434_0029680
331 Ga0451577_0000668
332 Ga0453684_0001916
333 Ga0495617_006262
334 Ga0495603_0001880
335 Ga0495638_0014876
336 Ga0495585_0004755
337 Ga0495594_0015765
338 Ga0495652_0062556
339 Ga0495622_0002062
340 Ga0495625_0000009
341 Ga0495657_0030344
342 Ga0495657_0159143
343 Ga0495613_0032492
344 Ga0495604_0265646
345 Ga0495674_0010672
346 Ga0495674_0250484
347 Ga0495683_0001104
348 Ga0495687_021258
349 Ga0495687_021802
350 Ga0495686_0031016
351 Ga0496104_0075150
352 Ga0496105_0046401
353 Ga0496105_0198636
354 Ga0496106_0248320
355 Ga0496108_0032437
356 Ga0496108_0053507
357 Ga0496109_0018953
358 Ga0496109_0019606
359 Ga0496110_0007519
360 Ga0496110_0338955
361 Ga0496111_0011468
362 Ga0501032_0048555
363 Ga0501034_0007356
364 Ga0501036_0001207
365 Ga0501037_0011316
366 Ga0501038_0044418
367 Ga0501039_0025032
368 Ga0501042_0084731
369 Ga0501046_0002096
370 Ga0501047_0000092
371 Ga0501047_0197470
372 Ga0501048_0200344
373 Ga0501070_0196785
374 Ga0501035_0029332
375 Ga0501044_0334771
376 Ga0501045_0053151
377 nmdc:mga0yw44_77246_c1
378 nmdc:mga06z11_123871_c1
379 Ga0495619_0035756
380 Ga0500590_031309
381 Ga0501082_0005445
382 2808899732
383 2809196847
384 2811846531
385 2812323958
386 2819578334
387 2862515957
388 2884995600
389 3006428277
390 8048411338

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

183

311

0.93

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

24

143

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yln-assembly2.cif.gz_D zinc dependent alcohol dehydrogenase 2 from streptococcus pneumonia - apo form 0.9733 1 344
4cpd-assembly2.cif.gz_C alcohol dehydrogenase tadh from thermus sp. atn1 0.9497 1 346
4cpd-assembly2.cif.gz_C alcohol dehydrogenase tadh from thermus sp. atn1 0.947 1 346
4cpd-assembly1.cif.gz_D alcohol dehydrogenase tadh from thermus sp. atn1 0.9453 1 344
7f3p-assembly1.cif.gz_B crystal structure of a nadp-dependent alcohol dehydrogenase mutant in apo form 0.9421 1 344
ID Description Score Start End Superfamily
5ylnC01 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9793 1 344 3.90.180.10
af_P77316_1_168_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9613 1 145 3.90.180.10
af_B4G1G0_229_356_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9575 162 286 3.40.50.720
af_A0A1D8PNH7_186_307_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9485 169 287 3.40.50.720
4cpdB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9473 152 289 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3N1GDF8-F1-model_v4 Alcohol dehydrogenase-like protein 0.9975 1 131 GO:0008270
GO:0016491
AF-A0A507B5N0-F1-model_v4 GST N-terminal domain-containing protein 0.9924 1 345 GO:0008270
GO:0016491
GO:0016740
AF-B8PPP3-F1-model_v4 deleted 0.99 1 167
AF-A0A160NUE1-F1-model_v4 Alcohol dehydrogenase, zinc-containing 0.9868 1 346 GO:0008270
GO:0016491
AF-A0A507B5N0-F1-model_v4 GST N-terminal domain-containing protein 0.9867 1 345 GO:0008270
GO:0016491
GO:0016740

Map