F300752

General Info

Members Datasets Scaffolds Average Seq Length
195 157 390 454

Family's Representative Sequence

Representative Sequence 3300050515|nmdc:mga0a205_30573_c1|nmdc:mga0a205_30573_c1_3171_4649
Length 492
Sequence LATGGEDQVPRFSIPRFPIYLIESSTARAHGRAVQTVPTLVIAGTHSGVGKTSVATALIAALARRGLKVQPFKIGPDFIDPTFHRAAAGRACRNLDGWMLPRETNLRLFARASEGADIAVVEGVMGLFDGHDGRTEAGSTAEMAKWLGSPVVLVADASALARSAGALVLGFETFDPDVDVAGVIFNRVGGPGHFAYLRDALAARCRSAPLGWLKQDPEVALPDRHLGLVMADEILTPARLDRLIAWLEANVDVDRLVQLARGRPPLQIDVPDTRETVPAPPPRIGVARDPAFSFYYEDNLDLLRRSGAALIEFSPIADAHLPEDVDGLYLGGGYPELHAAALAANASMRRDIAALARGGTPVYAECGGFMYLTEAIVDASGRVFEMAGVFPTRARMQTSLAALAYVEVEPSGGGGFLPRGRSARGHEFRWSAIDPMPDGVERCYRVKSKCGERADGFRIGQTLASYVHLHFESCPDFAARFVAACRRRKDHS

Samples

Sample ID Description Type Environment
1 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
2 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
9 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
10 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
11 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
12 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
13 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
14 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
15 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
16 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
19 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
20 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
21 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
22 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
23 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
24 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
27 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
33 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
34 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
35 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
36 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
37 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
38 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
39 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
40 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
41 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
42 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
43 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
44 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
45 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
46 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
47 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
48 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
49 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
50 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
51 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
52 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
57 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
58 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
59 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
60 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
61 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
62 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
63 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
64 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
65 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
66 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
67 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
68 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
69 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
70 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
71 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
72 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
73 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
74 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
75 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
76 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
77 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
78 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
79 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
80 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
81 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
82 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
83 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
87 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
88 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
89 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
90 2547132181 Kosakonia sacchari SP1 Isolate Stem
91 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
92 2561511199 Enterobacter sp. R4-368 Isolate Nodule
93 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
94 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
95 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
96 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
97 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
98 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
99 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
100 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
101 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
102 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
103 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
104 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
105 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
106 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
107 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
108 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
109 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
110 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
111 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
112 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
113 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
114 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
115 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
116 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
117 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
118 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
119 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
120 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
121 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
122 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
123 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
124 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
125 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
126 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
127 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
128 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
129 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
130 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
131 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
132 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
133 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
134 2636415599 Klebsiella variicola DX120E Isolate Unclassified
135 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
136 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
137 2775507074 Klebsiella sp. D5A Isolate Unclassified
138 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
139 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
140 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
141 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
142 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
143 2891670763 Buttiauxella sp. B2 Isolate Rhizosphere
144 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
145 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
146 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
147 2932406140 Serratia sp. 2723 Isolate Rhizosphere
148 2937539931 Pantoea sp. LS15 Isolate Unclassified
149 2939573065 Citrobacter sp. 506 Isolate Rhizosphere
150 2939577877 Serratia sp. 509 Isolate Rhizosphere
151 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
152 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
153 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
154 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
155 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
156 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
157 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 63.59
Metatranscriptomes 1.03
Isolates 35.38

Biome Distribution

Category Percentage (%)
Aerial Root 2.05
Bulb 0
Endosphere 0.51
Nodule 1.54
Rhizoplane 22.56
Rhizosphere 53.33
Stem 0.51
Stem Tuber 0
Unclassified 3.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0a205_30573_c1 3300050515 Bacteria 5157
2 Ga0058692_1002640 3300003856 Bacteria 5904
3 JGI25405J52794_10002389 3300003911 Bacteria 3227
4 Ga0070699_100020877 3300005518 Bacteria 5647
5 Ga0068855_100129499 3300005563 Bacteria 2883
6 Ga0068864_100221636 3300005618 Unclassified 1745
7 Ga0081455_10000364 3300005937 Bacteria 59805
8 Ga0070717_10066453 3300006028 Bacteria 2999
9 Ga0075428_100064502 3300006844 Bacteria 4011
10 Ga0075431_100166264 3300006847 Bacteria 2267
11 Ga0075433_10064758 3300006852 Bacteria 3205
12 Ga0075433_10117870 3300006852 Unclassified 2356
13 Ga0075433_10149436 3300006852 Bacteria 2078
14 Ga0079104_1000440 3300006946 Bacteria 47213
15 Ga0075435_100029733 3300007076 Bacteria 4289
16 Ga0105251_10008150 3300009011 Bacteria 6338
17 Ga0105251_10011619 3300009011 Bacteria 5024
18 Ga0105251_10017448 3300009011 Bacteria 3846
19 Ga0105251_10019683 3300009011 Bacteria 3559
20 Ga0105244_10001440 3300009036 Bacteria 19259
21 Ga0105244_10008559 3300009036 Bacteria 6381
22 Ga0105250_10000240 3300009092 Bacteria 45513
23 Ga0105250_10001726 3300009092 Bacteria 11527
24 Ga0105250_10003096 3300009092 Bacteria 8001
25 Ga0114129_10260879 3300009147 Unclassified 2323
26 Ga0163162_10147995 3300013306 Bacteria 2465
27 Ga0157380_10184234 3300014326 Bacteria 1837
28 Ga0183366_1001 3300015679 Bacteria 2743932
29 Ga0183370_1001 3300015680 Bacteria 2743932
30 Ga0183369_1001 3300015685 Bacteria 2743932
31 Ga0183368_1001 3300015687 Bacteria 2743932
32 Ga0206352_10260663 3300020078 Bacteria 3738
33 Ga0206350_10990978 3300020080 Bacteria 3544
34 Ga0213876_10000034 3300021384 Bacteria 202967
35 Ga0207696_1000053 3300025711 Bacteria 268590
36 Ga0207696_1000520 3300025711 Bacteria 31938
37 Ga0207655_1012727 3300025728 Bacteria 4887
38 Ga0207713_1000082 3300025735 Bacteria 164992
39 Ga0207713_1000880 3300025735 Bacteria 27401
40 Ga0207713_1022545 3300025735 Bacteria 2985
41 Ga0207713_1026424 3300025735 Bacteria 2660
42 Ga0207693_10126519 3300025915 Bacteria 2009
43 Ga0207652_10323460 3300025921 Bacteria 1392
44 Ga0209281_1000001 3300027111 Bacteria 1933496
45 Ga0209371_1000002 3300027312 Bacteria 1551985
46 Ga0209371_1000746 3300027312 Bacteria 27126
47 Ga0268256_1000002 3300030500 Bacteria 1535763
48 Ga0268256_1000504 3300030500 Bacteria 32957
49 Ga0307405_10054078 3300031731 Unclassified 2504
50 Ga0307416_100131355 3300032002 Bacteria 2255
51 Ga0373937_0201025 3300036401 Bacteria 1873
52 Ga0395898_0033464 3300037466 Bacteria 5129
53 Ga0400483_013864 3300039062 Bacteria 11864
54 Ga0436365_0868896 3300039437 Bacteria 14604
55 Ga0436365_0965775 3300039437 Bacteria 470291
56 Ga0436365_1640740 3300039437 Bacteria 2003
57 Ga0450906_011801 3300042145 Archaea 1628
58 Ga0439434_0009277 3300042435 Archaea 2890
59 Ga0451577_0150854 3300042876 Archaea 2091
60 Ga0466969_0000095 3300044656 Bacteria 46163
61 Ga0466969_0015592 3300044656 Unclassified 3982
62 Ga0453683_0000435 3300044673 Bacteria 47770
63 Ga0466966_0002844 3300044684 Bacteria 11388
64 Ga0466966_0011817 3300044684 Bacteria 5781
65 Ga0466961_0005147 3300044693 Bacteria 8226
66 Ga0466961_0009921 3300044693 Bacteria 6067
67 Ga0466964_0024515 3300044706 Bacteria 2351
68 Ga0453684_0000145 3300044712 Archaea 313029
69 Ga0453684_0006892 3300044712 Archaea 21318
70 Ga0453684_0020426 3300044712 Bacteria 9989
71 Ga0466968_0001856 3300044735 Bacteria 7638
72 Ga0466970_0003316 3300044765 Bacteria 7827
73 Ga0466957_0083140 3300044842 Unclassified 1996
74 Ga0466959_0004648 3300045049 Bacteria 9236
75 Ga0466959_0017927 3300045049 Bacteria 5194
76 Ga0466958_0003272 3300045836 Bacteria 8377
77 Ga0466967_0202107 3300045976 Bacteria 1882
78 Ga0495597_0000513 3300046542 Bacteria 32157
79 Ga0495597_0001091 3300046542 Bacteria 20586
80 Ga0495625_0002866 3300046660 Bacteria 18070
81 Ga0495588_0002116 3300046674 Bacteria 8523
82 Ga0495588_0003587 3300046674 Bacteria 6782
83 Ga0495674_0046416 3300047319 Bacteria 3856
84 Ga0495672_0000009 3300047320 Bacteria 557755
85 Ga0495679_000309 3300047446 Bacteria 39033
86 Ga0495681_0036591 3300047470 Bacteria 2426
87 Ga0496104_0000154 3300048907 Bacteria 62631
88 Ga0496105_0000613 3300048908 Bacteria 23855
89 Ga0496116_0004301 3300048919 Bacteria 13631
90 Ga0496117_0033217 3300048920 Bacteria 3904
91 Ga0496118_0002312 3300048921 Bacteria 25885
92 Ga0496119_0004225 3300048922 Bacteria 14409
93 Ga0496119_0011961 3300048922 Bacteria 7110
94 Ga0496120_0000725 3300048923 Bacteria 48287
95 Ga0496121_0000554 3300048924 Bacteria 70589
96 Ga0496122_0001144 3300048925 Bacteria 45511
97 Ga0496122_0015165 3300048925 Bacteria 7385
98 Ga0496122_0015568 3300048925 Bacteria 7260
99 Ga0496123_0000917 3300048926 Bacteria 46208
100 Ga0496123_0002345 3300048926 Bacteria 23746
101 Ga0496123_0030343 3300048926 Bacteria 3958
102 Ga0496123_0103642 3300048926 Bacteria 1647
103 Ga0496125_0000065 3300048928 Bacteria 249830
104 Ga0496125_0000978 3300048928 Bacteria 44685
105 Ga0496125_0009564 3300048928 Bacteria 9932
106 Ga0496126_0000860 3300048929 Bacteria 53466
107 Ga0496126_0001812 3300048929 Bacteria 31279
108 Ga0496126_0121940 3300048929 Bacteria 2260
109 Ga0496126_0225402 3300048929 Bacteria 1572
110 Ga0501199_002852 3300049650 Archaea 1635
111 Ga0501208_003855 3300049655 Archaea 1720
112 Ga0501235_002372 3300049669 Archaea 4062
113 Ga0501234_000843 3300049707 Archaea 4808
114 Ga0501245_001202 3300049708 Archaea 3342
115 Ga0501265_003582 3300049762 Archaea 1764
116 Ga0501266_000558 3300049763 Archaea 4934
117 Ga0501271_000485 3300049768 Archaea 3456
118 Ga0501276_000694 3300049773 Archaea 2111
119 nmdc:mga05p37_352751_c1 3300050507 Bacteria 1732
120 nmdc:mga09592_142839_c1 3300050508 Unclassified 2064
121 nmdc:mga0n895_480818_c1 3300050512 Archaea 1252
122 nmdc:mga0n895_83355_c1 3300050512 Bacteria 3188
123 nmdc:mga08x19_24040_c1 3300050514 Bacteria 3783
124 nmdc:mga0a205_21129_c1 3300050515 Bacteria 6155
125 nmdc:mga0a205_46123_c1 3300050515 Bacteria 4203
126 Ga0500628_000250 3300053129 Bacteria 10328
127 2512735890 2512564039 Bacteria 8739048
128 2547697151 2547132181 Bacteria 4945084
129 2555258479 2554235234 Bacteria 5762085
130 2562463308 2561511199 Bacteria 5155034
131 2599409922 2599185169 Bacteria 5441380
132 2601523116 2600255254 Bacteria 5281859
133 2601528275 2600255255 Bacteria 5282785
134 2601534793 2600255256 Bacteria 5597742
135 2601539578 2600255257 Bacteria 5597196
136 2601615108 2600255280 Bacteria 5292309
137 2601619966 2600255281 Bacteria 5288753
138 2601643574 2600255287 Bacteria 5210468
139 2601648371 2600255288 Bacteria 5282738
140 2601653160 2600255289 Bacteria 5281907
141 2601658719 2600255290 Bacteria 5282218
142 2601663397 2600255291 Bacteria 5217298
143 2601696720 2600255298 Bacteria 5215185
144 2601701030 2600255299 Bacteria 5218662
145 2601705815 2600255300 Bacteria 5287774
146 2601711400 2600255301 Bacteria 5280532
147 2601716418 2600255302 Bacteria 5288235
148 2601721746 2600255303 Bacteria 5219315
149 2601726824 2600255304 Bacteria 5283973
150 2601731364 2600255305 Bacteria 5282329
151 2601736376 2600255306 Bacteria 5281613
152 2601740640 2600255307 Bacteria 5439064
153 2601751577 2600255309 Bacteria 5431045
154 2601757928 2600255310 Bacteria 5600903
155 2601764286 2600255311 Bacteria 5598766
156 2602018563 2600255392 Bacteria 5437392
157 2603637103 2602042046 Bacteria 5483348
158 2603643004 2602042047 Bacteria 4697674
159 2603660781 2602042052 Bacteria 5215873
160 2603666054 2602042053 Bacteria 5214361
161 2603838759 2602042103 Bacteria 5284714
162 2603843981 2602042104 Bacteria 5281639
163 2603848915 2602042105 Bacteria 5282303
164 2603853986 2602042106 Bacteria 5282744
165 2603872040 2602042110 Bacteria 5283285
166 2603876866 2602042111 Bacteria 5212080
167 2606049222 2603880178 Bacteria 5283018
168 2606070487 2603880184 Bacteria 5217896
169 2606146905 2603880202 Bacteria 5284684
170 2606176631 2603880211 Bacteria 5284226
171 2609909905 2609459761 Bacteria 5513740
172 2637223534 2636415599 Bacteria 5718434
173 2676408291 2675903046 Bacteria 5451247
174 2775542198 2775506706 Bacteria 4873073
175 2777019850 2775507074 Bacteria 5532402
176 2791922007 2791354903 Bacteria 4937680
177 2792310383 2791355010 Bacteria 4864581
178 2813728120 2811995292 Bacteria 5303342
179 2814695664 2814123068 Bacteria 5687681
180 2837185186 2837183177 Bacteria 4637169
181 2891672183 2891670763 Bacteria 4967099
182 2904516818 2904513164 Bacteria 5476410
183 2919110335 2919108558 Bacteria 5897419
184 2929299117 2929297113 Bacteria 3141306
185 2932409784 2932406140 Bacteria 5134491
186 2937543364 2937539931 Bacteria 4639830
187 2939573114 2939573065 Bacteria 4926053
188 2939578902 2939577877 Bacteria 5132791
189 2945877104 2945874760 Bacteria 5527237
190 2969080568 2969079654 Bacteria 5439582
191 2971821949 2971820967 Bacteria 5823634
192 2984563009 2984559226 Bacteria 5683096
193 2984601067 2984595703 Bacteria 5682994
194 2990267984 2990265787 Bacteria 3943888
195 2993696997 2993693658 Bacteria 4040749
196 nmdc:mga0a205_30573_c1
197 Ga0058692_1002640
198 JGI25405J52794_10002389
199 Ga0070699_100020877
200 Ga0068855_100129499
201 Ga0068864_100221636
202 Ga0081455_10000364
203 Ga0070717_10066453
204 Ga0075428_100064502
205 Ga0075431_100166264
206 Ga0075433_10064758
207 Ga0075433_10117870
208 Ga0075433_10149436
209 Ga0079104_1000440
210 Ga0075435_100029733
211 Ga0105251_10008150
212 Ga0105251_10011619
213 Ga0105251_10017448
214 Ga0105251_10019683
215 Ga0105244_10001440
216 Ga0105244_10008559
217 Ga0105250_10000240
218 Ga0105250_10001726
219 Ga0105250_10003096
220 Ga0114129_10260879
221 Ga0163162_10147995
222 Ga0157380_10184234
223 Ga0183366_1001
224 Ga0183370_1001
225 Ga0183369_1001
226 Ga0183368_1001
227 Ga0206352_10260663
228 Ga0206350_10990978
229 Ga0213876_10000034
230 Ga0207696_1000053
231 Ga0207696_1000520
232 Ga0207655_1012727
233 Ga0207713_1000082
234 Ga0207713_1000880
235 Ga0207713_1022545
236 Ga0207713_1026424
237 Ga0207693_10126519
238 Ga0207652_10323460
239 Ga0209281_1000001
240 Ga0209371_1000002
241 Ga0209371_1000746
242 Ga0268256_1000002
243 Ga0268256_1000504
244 Ga0307405_10054078
245 Ga0307416_100131355
246 Ga0373937_0201025
247 Ga0395898_0033464
248 Ga0400483_013864
249 Ga0436365_0868896
250 Ga0436365_0965775
251 Ga0436365_1640740
252 Ga0450906_011801
253 Ga0439434_0009277
254 Ga0451577_0150854
255 Ga0466969_0000095
256 Ga0466969_0015592
257 Ga0453683_0000435
258 Ga0466966_0002844
259 Ga0466966_0011817
260 Ga0466961_0005147
261 Ga0466961_0009921
262 Ga0466964_0024515
263 Ga0453684_0000145
264 Ga0453684_0006892
265 Ga0453684_0020426
266 Ga0466968_0001856
267 Ga0466970_0003316
268 Ga0466957_0083140
269 Ga0466959_0004648
270 Ga0466959_0017927
271 Ga0466958_0003272
272 Ga0466967_0202107
273 Ga0495597_0000513
274 Ga0495597_0001091
275 Ga0495625_0002866
276 Ga0495588_0002116
277 Ga0495588_0003587
278 Ga0495674_0046416
279 Ga0495672_0000009
280 Ga0495679_000309
281 Ga0495681_0036591
282 Ga0496104_0000154
283 Ga0496105_0000613
284 Ga0496116_0004301
285 Ga0496117_0033217
286 Ga0496118_0002312
287 Ga0496119_0004225
288 Ga0496119_0011961
289 Ga0496120_0000725
290 Ga0496121_0000554
291 Ga0496122_0001144
292 Ga0496122_0015165
293 Ga0496122_0015568
294 Ga0496123_0000917
295 Ga0496123_0002345
296 Ga0496123_0030343
297 Ga0496123_0103642
298 Ga0496125_0000065
299 Ga0496125_0000978
300 Ga0496125_0009564
301 Ga0496126_0000860
302 Ga0496126_0001812
303 Ga0496126_0121940
304 Ga0496126_0225402
305 Ga0501199_002852
306 Ga0501208_003855
307 Ga0501235_002372
308 Ga0501234_000843
309 Ga0501245_001202
310 Ga0501265_003582
311 Ga0501266_000558
312 Ga0501271_000485
313 Ga0501276_000694
314 nmdc:mga05p37_352751_c1
315 nmdc:mga09592_142839_c1
316 nmdc:mga0n895_480818_c1
317 nmdc:mga0n895_83355_c1
318 nmdc:mga08x19_24040_c1
319 nmdc:mga0a205_21129_c1
320 nmdc:mga0a205_46123_c1
321 Ga0500628_000250
322 2512735890
323 2547697151
324 2555258479
325 2562463308
326 2599409922
327 2601523116
328 2601528275
329 2601534793
330 2601539578
331 2601615108
332 2601619966
333 2601643574
334 2601648371
335 2601653160
336 2601658719
337 2601663397
338 2601696720
339 2601701030
340 2601705815
341 2601711400
342 2601716418
343 2601721746
344 2601726824
345 2601731364
346 2601736376
347 2601740640
348 2601751577
349 2601757928
350 2601764286
351 2602018563
352 2603637103
353 2603643004
354 2603660781
355 2603666054
356 2603838759
357 2603843981
358 2603848915
359 2603853986
360 2603872040
361 2603876866
362 2606049222
363 2606070487
364 2606146905
365 2606176631
366 2609909905
367 2637223534
368 2676408291
369 2775542198
370 2777019850
371 2791922007
372 2792310383
373 2813728120
374 2814695664
375 2837185186
376 2891672183
377 2904516818
378 2919110335
379 2929299117
380 2932409784
381 2937543364
382 2939573114
383 2939578902
384 2945877104
385 2969080568
386 2971821949
387 2984563009
388 2984601067
389 2990267984
390 2993696997

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01656

CbiA

CobQ/CobB/MinD/ParA nucleotide binding domain

40

229

0.93

PF07685

GATase_3

CobB/CobQ-like glutamine amidotransferase domain

283

475

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zn8-assembly1.cif.gz_A structural basis of signal sequence surveillance and selection by the srp-sr complex 0.7429 31 210
5n9m-assembly2.cif.gz_B crystal structure of gatd - a glutamine amidotransferase from staphylococcus aureus involved in peptidoglycan amidation 0.7404 278 484
2wjz-assembly3.cif.gz_D crystal structure of (hish) k181a y138a mutant of imidazoleglycerolphosphate synthase (hish hisf) which displays constitutive glutaminase activity 0.7404 278 482
1dts-assembly1.cif.gz_A-2 crystal structure of an atp dependent carboxylase, dethiobiotin synthase, at 1.65 angstroms resolution 0.7359 32 215
7ac8-assembly3.cif.gz_F error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7343 278 482
ID Description Score Start End Superfamily
af_Q58816_43_191_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9288 75 220 3.40.50.300
af_P9WP97_251_439_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9271 278 471 3.40.50.880
af_P9WP97_251_439_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9082 278 471 3.40.50.880
af_Q58816_43_191_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9052 75 220 3.40.50.300
af_Q57602_240_429_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7801 31 216 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2J5PQC3-F1-model_v4 Cobyrinic acid a,c-diamide synthase 0.9949 295 486 GO:0006541
GO:0009236
GO:0042242
AF-A0A381GL07-F1-model_v4 deleted 0.9919 365 486
AF-P29946-F1-model_v4 Cobyrinate a,c-diamide synthase (EC 6.3.5.11) (Cobyrinic acid a,c-diamide synthetase) [Cleaved into: Cobyrinate a,c-diamide synthase, N-terminally processed] 0.9913 28 486 GO:0005524
GO:0009236
GO:0042242
AF-P29946-F1-model_v4 Cobyrinate a,c-diamide synthase (EC 6.3.5.11) (Cobyrinic acid a,c-diamide synthetase) [Cleaved into: Cobyrinate a,c-diamide synthase, N-terminally processed] 0.9892 28 486 GO:0005524
GO:0009236
GO:0042242
AF-A0A378BD84-F1-model_v4 Cobyrinate a,c-diamide synthase (EC 6.3.5.11) (Cobyrinic acid a,c-diamide synthetase) 0.9878 31 432 GO:0005524
GO:0006541
GO:0009236
GO:0042242

Map