F301263

General Info

Members Datasets Scaffolds Average Seq Length
196 115 392 456

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100046231|Ga0070665_1000462312
Length 516
Sequence VIPPERKQILVVDDEANLRRVLTAQLTRDGYDVHSAEDGEAGLAFLREHHIDLVITDLRMPKLDGMDLLRAALRDDASRPVVMMTAHGTVDTAVEALKTGAFDYITKPFDQNEVRIVVKKALRTKDLASADASPVTSDTAQGGSIAPSEEGVKFGIIGKSSPIMDLYAVLERVADTPTTVLVTGESGTGKELVARALHENSSRQDRPFIKVNCAAIPKDLMEAELFGYERGAFTGAIGSKPGRFELASGGTLFLDEIGELPNDMQVKLLRVLQESEFERVGGIKTMKVDVRLVAATNRDLKKEIASGNFREDLYYRLNVVPIALPALRERRSDIALLVSHFVTKFNARLKKHLTAVEDAALERLESYGWPGNIRELENVMERAVLFADGTRITVADLPEDVRQAPSLGPAGSSVHARSTPMDRISDLGDGASAQRASEVPSSGGSAREPSDLKEQVKAMTNRFEKGLIERALQQTQGNVTHAARLLKISRKGLQLKMKELGLRDVVGDAPGAGRDE

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
78 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
79 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
94 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
95 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
96 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
99 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
100 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
101 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
107 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
110 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
113 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0
Isolates 0.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 0
Rhizoplane 0.51
Rhizosphere 98.47
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100046231 3300005548 Bacteria 4373
2 LJQas_1000175 3300000549 Bacteria 11452
3 Ga0065704_10090290 3300005289 Bacteria 2797
4 Ga0065715_10095733 3300005293 Bacteria 4017
5 Ga0065707_10122338 3300005295 Bacteria 2090
6 Ga0070690_100141121 3300005330 Bacteria 1635
7 Ga0070680_100017059 3300005336 Bacteria 5719
8 Ga0070660_100058389 3300005339 Bacteria 2990
9 Ga0070675_100023258 3300005354 Bacteria 4953
10 Ga0070671_100011283 3300005355 Bacteria 7179
11 Ga0070671_100102742 3300005355 Bacteria 2398
12 Ga0070674_100021859 3300005356 Bacteria 4116
13 Ga0070673_100017097 3300005364 Bacteria 5147
14 Ga0070673_100113830 3300005364 Bacteria 2247
15 Ga0070659_100047997 3300005366 Bacteria 3352
16 Ga0070705_100010460 3300005440 Bacteria 4645
17 Ga0070694_100006945 3300005444 Bacteria 6878
18 Ga0070663_100012129 3300005455 Bacteria 5439
19 Ga0070662_100027582 3300005457 Bacteria 3944
20 Ga0070706_100058512 3300005467 Bacteria 3557
21 Ga0070707_100105334 3300005468 Bacteria 2735
22 Ga0070699_100188646 3300005518 Bacteria 1831
23 Ga0070679_100068580 3300005530 Bacteria 3537
24 Ga0068853_100014969 3300005539 Bacteria 6371
25 Ga0068853_100225548 3300005539 Bacteria 1713
26 Ga0070672_100064846 3300005543 Bacteria 2887
27 Ga0070672_100124951 3300005543 Bacteria 2109
28 Ga0070695_100004131 3300005545 Bacteria 8479
29 Ga0070695_100004935 3300005545 Bacteria 7867
30 Ga0070704_100009884 3300005549 Bacteria 5788
31 Ga0070704_100027742 3300005549 Bacteria 3760
32 Ga0068855_100040666 3300005563 Bacteria 5517
33 Ga0070664_100003750 3300005564 Bacteria 12258
34 Ga0070664_100022053 3300005564 Bacteria 5252
35 Ga0068859_100099111 3300005617 Bacteria 2969
36 Ga0068864_100099048 3300005618 Bacteria 2582
37 Ga0068870_10016242 3300005840 Bacteria 3552
38 Ga0068863_100037876 3300005841 Bacteria 4590
39 Ga0068863_100266651 3300005841 Bacteria 1657
40 Ga0068860_100192175 3300005843 Bacteria 1975
41 Ga0075428_100146953 3300006844 Bacteria 2562
42 Ga0075434_100062608 3300006871 Bacteria 3703
43 Ga0068865_100067476 3300006881 Bacteria 2527
44 Ga0097620_100099109 3300006931 Bacteria 2969
45 Ga0105240_10027564 3300009093 Bacteria 7436
46 Ga0105240_10192413 3300009093 Bacteria 2398
47 Ga0111539_10288399 3300009094 Bacteria 1910
48 Ga0105247_10006373 3300009101 Bacteria 7309
49 Ga0114129_10013206 3300009147 Bacteria 11764
50 Ga0105243_10033782 3300009148 Bacteria 3956
51 Ga0105237_10152332 3300009545 Bacteria 2309
52 Ga0105249_10007398 3300009553 Bacteria 9581
53 Ga0105249_10098668 3300009553 Bacteria 2744
54 Ga0157373_10017599 3300013100 Bacteria 5205
55 Ga0157373_10066293 3300013100 Bacteria 2554
56 Ga0157370_10205782 3300013104 Bacteria 1825
57 Ga0157372_10037485 3300013307 Bacteria 5349
58 Ga0157372_10184268 3300013307 Bacteria 2417
59 Ga0157375_10340557 3300013308 Bacteria 1665
60 Ga0157380_10001417 3300014326 Bacteria 15684
61 Ga0157380_10063606 3300014326 Bacteria 2959
62 Ga0163161_10000782 3300017792 Bacteria 25019
63 Ga0207710_10006840 3300025900 Bacteria 4855
64 Ga0207705_10010919 3300025909 Bacteria 6595
65 Ga0207684_10036778 3300025910 Bacteria 4155
66 Ga0207707_10009289 3300025912 Bacteria 8526
67 Ga0207695_10241461 3300025913 Bacteria 1708
68 Ga0207660_10074408 3300025917 Bacteria 2479
69 Ga0207657_10028765 3300025919 Bacteria 5065
70 Ga0207646_10090635 3300025922 Bacteria 2737
71 Ga0207650_10152173 3300025925 Bacteria 1826
72 Ga0207659_10044290 3300025926 Bacteria 3130
73 Ga0207644_10009700 3300025931 Bacteria 6328
74 Ga0207690_10092193 3300025932 Bacteria 2143
75 Ga0207706_10008890 3300025933 Bacteria 9248
76 Ga0207670_10006433 3300025936 Bacteria 6512
77 Ga0207691_10031208 3300025940 Bacteria 4975
78 Ga0207689_10031054 3300025942 Bacteria 4450
79 Ga0207679_10081007 3300025945 Bacteria 2481
80 Ga0207640_10149636 3300025981 Bacteria 1713
81 Ga0207658_10006628 3300025986 Bacteria 7886
82 Ga0207658_10030301 3300025986 Bacteria 3829
83 Ga0207703_10024980 3300026035 Bacteria 4699
84 Ga0207639_10003307 3300026041 Bacteria 10852
85 Ga0207678_10033296 3300026067 Bacteria 4491
86 Ga0207641_10086960 3300026088 Bacteria 2727
87 Ga0207641_10135370 3300026088 Bacteria 2217
88 Ga0207674_10041735 3300026116 Plasmid 4743
89 Ga0207674_10099687 3300026116 Bacteria 2887
90 Ga0268266_10049308 3300028379 Bacteria 3611
91 Ga0268264_10003179 3300028381 Bacteria 14229
92 Ga0268264_10201773 3300028381 Bacteria 1820
93 Ga0265327_10030099 3300031251 Bacteria 3075
94 Ga0307408_100126064 3300031548 Bacteria 1991
95 Ga0316575_10004401 3300031665 Bacteria 4958
96 Ga0316579_10009586 3300031691 Bacteria 4075
97 Ga0316579_10016040 3300031691 Bacteria 3264
98 Ga0316576_10094030 3300031727 Bacteria 2235
99 Ga0316578_10000150 3300031728 Bacteria 18261
100 Ga0307405_10006275 3300031731 Bacteria 5833
101 Ga0307405_10114153 3300031731 Bacteria 1835
102 Ga0316577_10011639 3300031733 Bacteria 4771
103 Ga0307413_10002203 3300031824 Bacteria 7843
104 Ga0307413_10002802 3300031824 Bacteria 7181
105 Ga0307413_10021983 3300031824 Bacteria 3427
106 Ga0307410_10005590 3300031852 Bacteria 6676
107 Ga0307410_10013039 3300031852 Bacteria 4834
108 Ga0307410_10133019 3300031852 Bacteria 1829
109 Ga0307406_10005269 3300031901 Bacteria 7069
110 Ga0307406_10008916 3300031901 Bacteria 5608
111 Ga0307406_10017347 3300031901 Bacteria 4191
112 Ga0307406_10048402 3300031901 Bacteria 2685
113 Ga0307406_10137582 3300031901 Bacteria 1724
114 Ga0307407_10028600 3300031903 Bacteria 2982
115 Ga0307412_10039919 3300031911 Bacteria 3034
116 Ga0307412_10046542 3300031911 Bacteria 2843
117 Ga0307412_10083523 3300031911 Bacteria 2214
118 Ga0307409_100015620 3300031995 Bacteria 4990
119 Ga0307409_100037847 3300031995 Bacteria 3561
120 Ga0307409_100100404 3300031995 Bacteria 2398
121 Ga0307416_100111071 3300032002 Bacteria 2415
122 Ga0307414_10120466 3300032004 Bacteria 2016
123 Ga0307411_10007842 3300032005 Bacteria 5480
124 Ga0307411_10014814 3300032005 Bacteria 4354
125 Ga0307411_10043400 3300032005 Bacteria 2876
126 Ga0307411_10060924 3300032005 Bacteria 2509
127 Ga0307415_100025583 3300032126 Bacteria 3707
128 Ga0307415_100028091 3300032126 Bacteria 3574
129 Ga0307415_100032458 3300032126 Bacteria 3376
130 Ga0316583_10001359 3300032133 Bacteria 8115
131 Ga0373928_0001084 3300035084 Bacteria 5381
132 Ga0316574_0000568 3300035398 Bacteria 15285
133 Ga0373937_0190584 3300036401 Bacteria 1927
134 Ga0316582_0007708 3300036647 Bacteria 5746
135 Ga0316582_0019182 3300036647 Bacteria 3997
136 Ga0316584_0009923 3300036712 Bacteria 6631
137 Ga0436362_0638448 3300039453 Bacteria 1543
138 Ga0439432_029001 3300042006 Bacteria 1801
139 Ga0451577_0000146 3300042876 Bacteria 156252
140 Ga0451577_0001484 3300042876 Bacteria 31087
141 Ga0451577_0005930 3300042876 Bacteria 12318
142 Ga0451577_0019887 3300042876 Bacteria 6167
143 Ga0451577_0027811 3300042876 Bacteria 5118
144 Ga0451577_0032551 3300042876 Bacteria 4697
145 Ga0451577_0174485 3300042876 Bacteria 1937
146 Ga0453683_0000001 3300044673 Bacteria 1384965
147 Ga0453683_0000009 3300044673 Bacteria 491115
148 Ga0453683_0000012 3300044673 Bacteria 376341
149 Ga0453683_0000041 3300044673 Bacteria 219754
150 Ga0453683_0000355 3300044673 Bacteria 55441
151 Ga0453683_0004494 3300044673 Bacteria 9884
152 Ga0453683_0006805 3300044673 Bacteria 7808
153 Ga0453683_0019458 3300044673 Bacteria 4348
154 Ga0453683_0022845 3300044673 Bacteria 3988
155 Ga0453683_0035154 3300044673 Bacteria 3158
156 Ga0453684_0000123 3300044712 Bacteria 339304
157 Ga0453684_0000924 3300044712 Bacteria 97175
158 Ga0453684_0000996 3300044712 Bacteria 92235
159 Ga0453684_0001182 3300044712 Bacteria 80877
160 Ga0453684_0001186 3300044712 Bacteria 80587
161 Ga0453684_0001201 3300044712 Bacteria 79902
162 Ga0453684_0006753 3300044712 Bacteria 21593
163 Ga0453684_0010645 3300044712 Bacteria 15667
164 Ga0453684_0010686 3300044712 Bacteria 15614
165 Ga0453684_0012269 3300044712 Bacteria 14189
166 Ga0453684_0027875 3300044712 Bacteria 8080
167 Ga0453684_0036838 3300044712 Bacteria 6732
168 Ga0453684_0037744 3300044712 Bacteria 6624
169 Ga0453684_0044342 3300044712 Bacteria 5953
170 Ga0453684_0066928 3300044712 Bacteria 4572
171 Ga0453684_0132376 3300044712 Bacteria 2991
172 Ga0453684_0169160 3300044712 Bacteria 2577
173 Ga0453684_0388311 3300044712 Bacteria 1566
174 Ga0451576_0000026 3300045051 Bacteria 427585
175 Ga0451576_0000492 3300045051 Bacteria 87364
176 Ga0451576_0002477 3300045051 Bacteria 27441
177 Ga0451576_0015002 3300045051 Bacteria 8608
178 Ga0451576_0017033 3300045051 Bacteria 7998
179 Ga0451576_0018225 3300045051 Bacteria 7699
180 Ga0451576_0039878 3300045051 Bacteria 4971
181 Ga0451576_0160184 3300045051 Bacteria 2348
182 Ga0451576_0202911 3300045051 Bacteria 2071
183 Ga0451576_0293843 3300045051 Bacteria 1699
184 Ga0495598_0023614 3300046537 Bacteria 1658
185 Ga0495668_0000847 3300046616 Bacteria 34708
186 Ga0496109_0204695 3300048912 Bacteria 1855
187 Ga0501072_0041945 3300049588 Bacteria 3594
188 Ga0501073_0025350 3300049589 Bacteria 4253
189 Ga0501080_0006972 3300049742 Bacteria 10198
190 Ga0501080_0052872 3300049742 Bacteria 3781
191 Ga0501083_0017136 3300049744 Bacteria 5053
192 Ga0501083_0075400 3300049744 Bacteria 2240
193 Ga0500577_0007224 3300053142 Bacteria 3105
194 Ga0501084_0000996 3300054114 Bacteria 22011
195 Ga0501084_0011481 3300054114 Bacteria 7335
196 2740992674 2740891818 Bacteria 6711283
197 Ga0070665_100046231
198 LJQas_1000175
199 Ga0065704_10090290
200 Ga0065715_10095733
201 Ga0065707_10122338
202 Ga0070690_100141121
203 Ga0070680_100017059
204 Ga0070660_100058389
205 Ga0070675_100023258
206 Ga0070671_100011283
207 Ga0070671_100102742
208 Ga0070674_100021859
209 Ga0070673_100017097
210 Ga0070673_100113830
211 Ga0070659_100047997
212 Ga0070705_100010460
213 Ga0070694_100006945
214 Ga0070663_100012129
215 Ga0070662_100027582
216 Ga0070706_100058512
217 Ga0070707_100105334
218 Ga0070699_100188646
219 Ga0070679_100068580
220 Ga0068853_100014969
221 Ga0068853_100225548
222 Ga0070672_100064846
223 Ga0070672_100124951
224 Ga0070695_100004131
225 Ga0070695_100004935
226 Ga0070704_100009884
227 Ga0070704_100027742
228 Ga0068855_100040666
229 Ga0070664_100003750
230 Ga0070664_100022053
231 Ga0068859_100099111
232 Ga0068864_100099048
233 Ga0068870_10016242
234 Ga0068863_100037876
235 Ga0068863_100266651
236 Ga0068860_100192175
237 Ga0075428_100146953
238 Ga0075434_100062608
239 Ga0068865_100067476
240 Ga0097620_100099109
241 Ga0105240_10027564
242 Ga0105240_10192413
243 Ga0111539_10288399
244 Ga0105247_10006373
245 Ga0114129_10013206
246 Ga0105243_10033782
247 Ga0105237_10152332
248 Ga0105249_10007398
249 Ga0105249_10098668
250 Ga0157373_10017599
251 Ga0157373_10066293
252 Ga0157370_10205782
253 Ga0157372_10037485
254 Ga0157372_10184268
255 Ga0157375_10340557
256 Ga0157380_10001417
257 Ga0157380_10063606
258 Ga0163161_10000782
259 Ga0207710_10006840
260 Ga0207705_10010919
261 Ga0207684_10036778
262 Ga0207707_10009289
263 Ga0207695_10241461
264 Ga0207660_10074408
265 Ga0207657_10028765
266 Ga0207646_10090635
267 Ga0207650_10152173
268 Ga0207659_10044290
269 Ga0207644_10009700
270 Ga0207690_10092193
271 Ga0207706_10008890
272 Ga0207670_10006433
273 Ga0207691_10031208
274 Ga0207689_10031054
275 Ga0207679_10081007
276 Ga0207640_10149636
277 Ga0207658_10006628
278 Ga0207658_10030301
279 Ga0207703_10024980
280 Ga0207639_10003307
281 Ga0207678_10033296
282 Ga0207641_10086960
283 Ga0207641_10135370
284 Ga0207674_10041735
285 Ga0207674_10099687
286 Ga0268266_10049308
287 Ga0268264_10003179
288 Ga0268264_10201773
289 Ga0265327_10030099
290 Ga0307408_100126064
291 Ga0316575_10004401
292 Ga0316579_10009586
293 Ga0316579_10016040
294 Ga0316576_10094030
295 Ga0316578_10000150
296 Ga0307405_10006275
297 Ga0307405_10114153
298 Ga0316577_10011639
299 Ga0307413_10002203
300 Ga0307413_10002802
301 Ga0307413_10021983
302 Ga0307410_10005590
303 Ga0307410_10013039
304 Ga0307410_10133019
305 Ga0307406_10005269
306 Ga0307406_10008916
307 Ga0307406_10017347
308 Ga0307406_10048402
309 Ga0307406_10137582
310 Ga0307407_10028600
311 Ga0307412_10039919
312 Ga0307412_10046542
313 Ga0307412_10083523
314 Ga0307409_100015620
315 Ga0307409_100037847
316 Ga0307409_100100404
317 Ga0307416_100111071
318 Ga0307414_10120466
319 Ga0307411_10007842
320 Ga0307411_10014814
321 Ga0307411_10043400
322 Ga0307411_10060924
323 Ga0307415_100025583
324 Ga0307415_100028091
325 Ga0307415_100032458
326 Ga0316583_10001359
327 Ga0373928_0001084
328 Ga0316574_0000568
329 Ga0373937_0190584
330 Ga0316582_0007708
331 Ga0316582_0019182
332 Ga0316584_0009923
333 Ga0436362_0638448
334 Ga0439432_029001
335 Ga0451577_0000146
336 Ga0451577_0001484
337 Ga0451577_0005930
338 Ga0451577_0019887
339 Ga0451577_0027811
340 Ga0451577_0032551
341 Ga0451577_0174485
342 Ga0453683_0000001
343 Ga0453683_0000009
344 Ga0453683_0000012
345 Ga0453683_0000041
346 Ga0453683_0000355
347 Ga0453683_0004494
348 Ga0453683_0006805
349 Ga0453683_0019458
350 Ga0453683_0022845
351 Ga0453683_0035154
352 Ga0453684_0000123
353 Ga0453684_0000924
354 Ga0453684_0000996
355 Ga0453684_0001182
356 Ga0453684_0001186
357 Ga0453684_0001201
358 Ga0453684_0006753
359 Ga0453684_0010645
360 Ga0453684_0010686
361 Ga0453684_0012269
362 Ga0453684_0027875
363 Ga0453684_0036838
364 Ga0453684_0037744
365 Ga0453684_0044342
366 Ga0453684_0066928
367 Ga0453684_0132376
368 Ga0453684_0169160
369 Ga0453684_0388311
370 Ga0451576_0000026
371 Ga0451576_0000492
372 Ga0451576_0002477
373 Ga0451576_0015002
374 Ga0451576_0017033
375 Ga0451576_0018225
376 Ga0451576_0039878
377 Ga0451576_0160184
378 Ga0451576_0202911
379 Ga0451576_0293843
380 Ga0495598_0023614
381 Ga0495668_0000847
382 Ga0496109_0204695
383 Ga0501072_0041945
384 Ga0501073_0025350
385 Ga0501080_0006972
386 Ga0501080_0052872
387 Ga0501083_0017136
388 Ga0501083_0075400
389 Ga0500577_0007224
390 Ga0501084_0000996
391 Ga0501084_0011481
392 2740992674

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

156

323

0.99

PF00072

Response_reg

Response regulator receiver domain

9

119

0.97

PF02954

HTH_8

Bacterial regulatory protein, Fis family

461

500

0.96

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

157

327

0.93

PF07728

AAA_5

AAA domain (dynein-related subfamily)

179

311

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l5e-assembly1.cif.gz_A-2 crystal structure of a. aeolicus ntrc1 dna binding domain 0.9823 393 437
6rh1-assembly1.cif.gz_C revisiting ph-gated conformational switch. complex hk853-rr468 d53a ph 7 0.969 4 119
1etq-assembly2.cif.gz_C the crystal structure of e. coli fis mutant r71y 0.969 397 436
7w9h-assembly1.cif.gz_A crystal structure of the receiver domain of the transcription regulator fler from pseudomonas aeruginosa 0.9683 3 117
1etv-assembly1.cif.gz_A the crystal structure of e. coli fis mutant g72a 0.9673 396 436
ID Description Score Start End Superfamily
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9862 129 296 3.40.50.300
4l5eA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9822 393 437 1.10.10.60
af_P14375_1_129_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9817 3 119 3.40.50.2300
af_P07604_193_369_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9747 126 298 3.40.50.300
1ojlB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9727 129 299 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6M0S994-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9808 1 119 GO:0000155
GO:0005737
GO:0006935
AF-A0A661I6D6-F1-model_v4 Two-component system response regulator 0.9765 3 120 GO:0000160
GO:0016787
AF-A0A3S0TMU0-F1-model_v4 deleted 0.9757 2 120
AF-A0A5C7KSI4-F1-model_v4 Response regulator 0.9747 3 120 GO:0000160
AF-A0A1V5FWC1-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9741 1 120 GO:0000155
GO:0005737
GO:0006935

Map