F301317
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 196 | 155 | 174 | 347 |
Family's Representative Sequence
| Representative Sequence | 3300005843|Ga0068860_100003085|Ga0068860_10000308512 |
| Length | 411 |
| Sequence | MSDEASAGPTTVHPIEHWVLHVDLDQFIAAVEVLRHPELAGKPVIVGGDGDPSKRGVVSTASYEARQYGVGSGMALRIAARKCPDAVFLPVDREAYDEASAGVMDTLRSLEWGGRPVVLEVLGWDEAFLAAGPRPGDDTAARGAQLGRGRPWAGAADELNVEAGQGSLPPVTLEGAAPSAGKGVAFAAHIRERVLAATRLHCSVGIGDNKLRGKIATEFGKPRGSYVLTAENWFEVMGDRPTTALWGIGGKTAKKLAALGIDTVTQLAESDARVLAAELGPTMGPWYHRIGRGVSDSAVTAEPWVPRAHGRETTFQEDLDDWVRIAEEVRALTRQVVTDIDKEGRPAARVGLKLRYRPFITISRSLTLPEATNDPATLAEAAVSLLERVEKERPVRLLGVRLEMVPPEGGY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 2 | 2643221561 | Nocardioides sp. Root151 | Isolate | Unclassified |
| 3 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 4 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 5 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 6 | 2643221711 | Terrabacter sp. Root85 | Isolate | Unclassified |
| 7 | 2643221961 | Aeromicrobium sp. Root236 | Isolate | Unclassified |
| 8 | 2643221962 | Aeromicrobium sp. Root344 | Isolate | Unclassified |
| 9 | 2738541305 | Nocardioides sp. CF167 | Isolate | Unclassified |
| 10 | 2811994882 | Terrabacter sp. SLBN-196 | Isolate | Unclassified |
| 11 | 2818991318 | Humibacillus xanthopallidus SLBN-155 | Isolate | Unclassified |
| 12 | 2818991458 | Terrabacter sp. 3211 | Isolate | Rhizosphere |
| 13 | 2818991462 | Terrabacter sp. 3264 | Isolate | Rhizosphere |
| 14 | 2818991469 | Terrabacter lapilli 3265 | Isolate | Rhizosphere |
| 15 | 2835188231 | Isoptericola variabilis JZ7 | Isolate | Unclassified |
| 16 | 2842888712 | Tsukamurella sp. R-71941 | Isolate | Unclassified |
| 17 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 18 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 19 | 2899370129 | Amycolatopsis alkalitolerans SYSUP0005 | Isolate | Stem Tuber |
| 20 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 21 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 22 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 28 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 31 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 32 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 33 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 34 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 35 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 36 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 37 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 38 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 39 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 40 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 41 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 63 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 64 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 65 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 66 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 67 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 68 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 69 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 70 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 71 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 72 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 73 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 74 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 75 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 76 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 77 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 78 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 79 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 80 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 81 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 82 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 83 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 84 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 85 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 86 | 3300042437 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 | Metagenome | Rhizosphere |
| 87 | 3300042461 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 | Metagenome | Rhizosphere |
| 88 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 89 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 90 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 91 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 92 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 93 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 112 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 113 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 114 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 115 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 116 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 117 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 120 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 121 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 122 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 123 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 133 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 136 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 142 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 143 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 144 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 146 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 150 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 151 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 152 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 153 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 154 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 155 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.76 |
| Metatranscriptomes | 1.02 |
| Isolates | 11.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.12 |
| Nodule | 0 |
| Rhizoplane | 11.73 |
| Rhizosphere | 70.41 |
| Stem | 0 |
| Stem Tuber | 0.51 |
| Unclassified | 11.22 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0006562J51391_1021542 | 3300003578 | Bacteria | 3910 |
| 2 | Ga0006562J51391_1021543 | 3300003578 | Bacteria | 1855 |
| 3 | Ga0068868_100068800 | 3300005338 | Bacteria | 2820 |
| 4 | Ga0070661_100216928 | 3300005344 | Bacteria | 1466 |
| 5 | Ga0070668_100011923 | 3300005347 | Bacteria | 6471 |
| 6 | Ga0070667_100007122 | 3300005367 | Bacteria | 9298 |
| 7 | Ga0070663_100000117 | 3300005455 | Bacteria | 37277 |
| 8 | Ga0070678_100190300 | 3300005456 | Bacteria | 1687 |
| 9 | Ga0070684_100159006 | 3300005535 | Bacteria | 2049 |
| 10 | Ga0070684_100416078 | 3300005535 | Bacteria | 1240 |
| 11 | Ga0070693_100059933 | 3300005547 | Bacteria | 2208 |
| 12 | Ga0070664_100149394 | 3300005564 | Bacteria | 2062 |
| 13 | Ga0068860_100003085 | 3300005843 | Bacteria | 17230 |
| 14 | Ga0081455_10000352 | 3300005937 | Bacteria | 60576 |
| 15 | Ga0081455_10058549 | 3300005937 | Bacteria | 3259 |
| 16 | Ga0081538_10063080 | 3300005981 | Bacteria | 2107 |
| 17 | Ga0075365_10010165 | 3300006038 | Bacteria | 5464 |
| 18 | Ga0075365_10021072 | 3300006038 | Bacteria | 4058 |
| 19 | Ga0075365_10117858 | 3300006038 | Bacteria | 1829 |
| 20 | Ga0075365_10132894 | 3300006038 | Bacteria | 1723 |
| 21 | Ga0075368_10003264 | 3300006042 | Bacteria | 5401 |
| 22 | Ga0075370_10040271 | 3300006353 | Bacteria | 2635 |
| 23 | Ga0075428_100004037 | 3300006844 | Bacteria | 16128 |
| 24 | Ga0075428_100006897 | 3300006844 | Bacteria | 12616 |
| 25 | Ga0075430_100007755 | 3300006846 | Bacteria | 9070 |
| 26 | Ga0075431_100042426 | 3300006847 | Bacteria | 4692 |
| 27 | Ga0075433_10071563 | 3300006852 | Bacteria | 3048 |
| 28 | Ga0075429_100001988 | 3300006880 | Bacteria | 16983 |
| 29 | Ga0111539_10198168 | 3300009094 | Bacteria | 2342 |
| 30 | Ga0114129_10016875 | 3300009147 | Bacteria | 10395 |
| 31 | Ga0114129_10033388 | 3300009147 | Bacteria | 7272 |
| 32 | Ga0105243_10031850 | 3300009148 | Bacteria | 4068 |
| 33 | Ga0105242_10040782 | 3300009176 | Bacteria | 3741 |
| 34 | Ga0105238_10137374 | 3300009551 | Bacteria | 2422 |
| 35 | Ga0105246_10113476 | 3300011119 | Bacteria | 1995 |
| 36 | Ga0157372_10085731 | 3300013307 | Bacteria | 3573 |
| 37 | Ga0157372_10156290 | 3300013307 | Bacteria | 2634 |
| 38 | Ga0157375_10143397 | 3300013308 | Bacteria | 2517 |
| 39 | Ga0163161_10016161 | 3300017792 | Bacteria | 5210 |
| 40 | Ga0207705_10098078 | 3300025909 | Bacteria | 2153 |
| 41 | Ga0207657_10101326 | 3300025919 | Bacteria | 2390 |
| 42 | Ga0207690_10051330 | 3300025932 | Bacteria | 2758 |
| 43 | Ga0207669_10185030 | 3300025937 | Bacteria | 1497 |
| 44 | Ga0207679_10128018 | 3300025945 | Bacteria | 2033 |
| 45 | Ga0207658_10013057 | 3300025986 | Bacteria | 5672 |
| 46 | Ga0207678_10000093 | 3300026067 | Bacteria | 74658 |
| 47 | Ga0207678_10284950 | 3300026067 | Bacteria | 1418 |
| 48 | Ga0207708_10333369 | 3300026075 | Bacteria | 1241 |
| 49 | Ga0207675_100332989 | 3300026118 | Bacteria | 1484 |
| 50 | Ga0207683_10152274 | 3300026121 | Bacteria | 2087 |
| 51 | Ga0207683_10163343 | 3300026121 | Bacteria | 2014 |
| 52 | Ga0207698_10394524 | 3300026142 | Bacteria | 1321 |
| 53 | Ga0268264_10001626 | 3300028381 | Bacteria | 20764 |
| 54 | Ga0307408_100068408 | 3300031548 | Bacteria | 2615 |
| 55 | Ga0307405_10081826 | 3300031731 | Bacteria | 2112 |
| 56 | Ga0307405_10101680 | 3300031731 | Bacteria | 1929 |
| 57 | Ga0307410_10106772 | 3300031852 | Bacteria | 2018 |
| 58 | Ga0307407_10007993 | 3300031903 | Bacteria | 4825 |
| 59 | Ga0307407_10052894 | 3300031903 | Bacteria | 2334 |
| 60 | Ga0307412_10030697 | 3300031911 | Bacteria | 3387 |
| 61 | Ga0307409_100041439 | 3300031995 | Bacteria | 3439 |
| 62 | Ga0307409_100114838 | 3300031995 | Bacteria | 2266 |
| 63 | Ga0307416_100019467 | 3300032002 | Bacteria | 4813 |
| 64 | Ga0307416_100213614 | 3300032002 | Bacteria | 1843 |
| 65 | Ga0307416_100246331 | 3300032002 | Bacteria | 1736 |
| 66 | Ga0307416_100310753 | 3300032002 | Bacteria | 1573 |
| 67 | Ga0307411_10028049 | 3300032005 | Bacteria | 3417 |
| 68 | Ga0307411_10051625 | 3300032005 | Bacteria | 2684 |
| 69 | Ga0307411_10296973 | 3300032005 | Bacteria | 1294 |
| 70 | Ga0307415_100030757 | 3300032126 | Bacteria | 3450 |
| 71 | Ga0307510_10066767 | 3300033180 | Bacteria | 3628 |
| 72 | Ga0373934_0000004 | 3300035086 | Bacteria | 87334 |
| 73 | Ga0373953_0001205 | 3300035117 | Bacteria | 7370 |
| 74 | Ga0373954_0002885 | 3300035118 | Bacteria | 7254 |
| 75 | Ga0373956_0000601 | 3300035119 | Bacteria | 14759 |
| 76 | Ga0373957_0002328 | 3300035120 | Bacteria | 5393 |
| 77 | Ga0373955_0000025 | 3300035172 | Bacteria | 58341 |
| 78 | Ga0373924_0002276 | 3300035410 | Bacteria | 6445 |
| 79 | Ga0373933_0000119 | 3300035724 | Bacteria | 51009 |
| 80 | Ga0373937_0000306 | 3300036401 | Bacteria | 46226 |
| 81 | Ga0395901_0035183 | 3300038443 | Bacteria | 5175 |
| 82 | Ga0395901_0061413 | 3300038443 | Bacteria | 3910 |
| 83 | Ga0395901_0534956 | 3300038443 | Bacteria | 1189 |
| 84 | Ga0451853_3517755 | 3300041512 | Bacteria | 1089 |
| 85 | Ga0439431_0001337 | 3300041997 | Bacteria | 5427 |
| 86 | Ga0439446_0060665 | 3300042156 | Bacteria | 1143 |
| 87 | Ga0439434_0022438 | 3300042435 | Bacteria | 1898 |
| 88 | Ga0439444_0004831 | 3300042437 | Bacteria | 1974 |
| 89 | Ga0439460_0014391 | 3300042461 | Bacteria | 2079 |
| 90 | Ga0466972_0030141 | 3300044658 | Bacteria | 2671 |
| 91 | Ga0466972_0037600 | 3300044658 | Bacteria | 2366 |
| 92 | Ga0466970_0018666 | 3300044765 | Bacteria | 3593 |
| 93 | Ga0466970_0076305 | 3300044765 | Bacteria | 1806 |
| 94 | Ga0466957_0236522 | 3300044842 | Bacteria | 1211 |
| 95 | Ga0466960_0005256 | 3300044901 | Bacteria | 5114 |
| 96 | Ga0466960_0014478 | 3300044901 | Bacteria | 3377 |
| 97 | Ga0466960_0091565 | 3300044901 | Bacteria | 1551 |
| 98 | Ga0466967_0061602 | 3300045976 | Bacteria | 3329 |
| 99 | Ga0495592_0000200 | 3300046454 | Bacteria | 51023 |
| 100 | Ga0495651_0000151 | 3300046462 | Bacteria | 51025 |
| 101 | Ga0495653_0006911 | 3300046463 | Bacteria | 9323 |
| 102 | Ga0495608_0000147 | 3300046511 | Bacteria | 50943 |
| 103 | Ga0495628_0000753 | 3300046516 | Bacteria | 29919 |
| 104 | Ga0495652_0000276 | 3300046529 | Bacteria | 60614 |
| 105 | Ga0495587_0000045 | 3300046536 | Bacteria | 108362 |
| 106 | Ga0495667_0000051 | 3300046559 | Bacteria | 109277 |
| 107 | Ga0495657_0000044 | 3300046675 | Bacteria | 108383 |
| 108 | Ga0495599_0000101 | 3300046678 | Bacteria | 60499 |
| 109 | Ga0495623_0001529 | 3300046679 | Bacteria | 15620 |
| 110 | Ga0495646_0036726 | 3300046680 | Bacteria | 3034 |
| 111 | Ga0495600_0003438 | 3300046809 | Bacteria | 9308 |
| 112 | Ga0495604_0000046 | 3300047317 | Bacteria | 110553 |
| 113 | Ga0495680_0000108 | 3300047322 | Bacteria | 77095 |
| 114 | Ga0495675_0000119 | 3300047444 | Bacteria | 57079 |
| 115 | Ga0495602_0000167 | 3300048088 | Bacteria | 61216 |
| 116 | Ga0496100_0068909 | 3300048903 | Bacteria | 2354 |
| 117 | Ga0496101_0027862 | 3300048904 | Bacteria | 3940 |
| 118 | Ga0496102_0073319 | 3300048905 | Bacteria | 3146 |
| 119 | Ga0496103_0043841 | 3300048906 | Bacteria | 2755 |
| 120 | Ga0496103_0044377 | 3300048906 | Bacteria | 2739 |
| 121 | Ga0496104_0034858 | 3300048907 | Bacteria | 4695 |
| 122 | Ga0496104_0086217 | 3300048907 | Bacteria | 2998 |
| 123 | Ga0496105_0115392 | 3300048908 | Bacteria | 2215 |
| 124 | Ga0496105_0171259 | 3300048908 | Bacteria | 1780 |
| 125 | Ga0496107_0060117 | 3300048910 | Bacteria | 2750 |
| 126 | Ga0496108_0298331 | 3300048911 | Bacteria | 1403 |
| 127 | Ga0496109_0247555 | 3300048912 | Bacteria | 1678 |
| 128 | Ga0496109_0291770 | 3300048912 | Bacteria | 1538 |
| 129 | Ga0496110_0040008 | 3300048913 | Bacteria | 4084 |
| 130 | Ga0496111_0039422 | 3300048914 | Bacteria | 3386 |
| 131 | Ga0496111_0079983 | 3300048914 | Bacteria | 2384 |
| 132 | Ga0496113_0035584 | 3300048916 | Bacteria | 3642 |
| 133 | Ga0496113_0106738 | 3300048916 | Bacteria | 2175 |
| 134 | Ga0496113_0217535 | 3300048916 | Bacteria | 1522 |
| 135 | Ga0496114_0037796 | 3300048917 | Bacteria | 3993 |
| 136 | Ga0496114_0065214 | 3300048917 | Bacteria | 3051 |
| 137 | Ga0496114_0081104 | 3300048917 | Bacteria | 2740 |
| 138 | Ga0496114_0122923 | 3300048917 | Bacteria | 2234 |
| 139 | Ga0501033_0061086 | 3300049570 | Bacteria | 2778 |
| 140 | Ga0501038_0045722 | 3300049574 | Bacteria | 3799 |
| 141 | Ga0501040_0014706 | 3300049576 | Bacteria | 5162 |
| 142 | Ga0501041_0001871 | 3300049577 | Bacteria | 11787 |
| 143 | Ga0501042_0036364 | 3300049578 | Bacteria | 3493 |
| 144 | Ga0501042_0196758 | 3300049578 | Bacteria | 1454 |
| 145 | Ga0501046_0011775 | 3300049580 | Bacteria | 7468 |
| 146 | Ga0501048_0009795 | 3300049582 | Bacteria | 7184 |
| 147 | Ga0501067_0025041 | 3300049583 | Bacteria | 3309 |
| 148 | Ga0501067_0085400 | 3300049583 | Bacteria | 1751 |
| 149 | Ga0501067_0087546 | 3300049583 | Bacteria | 1728 |
| 150 | Ga0501068_0016754 | 3300049584 | Bacteria | 4229 |
| 151 | Ga0501068_0220207 | 3300049584 | Bacteria | 1206 |
| 152 | Ga0501069_0054339 | 3300049585 | Bacteria | 2231 |
| 153 | Ga0501069_0148136 | 3300049585 | Bacteria | 1348 |
| 154 | Ga0501070_0368601 | 3300049586 | Bacteria | 1164 |
| 155 | Ga0501071_0200282 | 3300049587 | Bacteria | 1500 |
| 156 | Ga0501072_0002851 | 3300049588 | Bacteria | 12977 |
| 157 | Ga0501076_0012700 | 3300049592 | Bacteria | 6305 |
| 158 | Ga0501077_0005331 | 3300049593 | Bacteria | 7816 |
| 159 | Ga0501079_0035779 | 3300049741 | Bacteria | 3823 |
| 160 | Ga0501081_0010954 | 3300049743 | Bacteria | 5926 |
| 161 | Ga0501035_0140160 | 3300049822 | Bacteria | 2103 |
| 162 | nmdc:mga00v17_93823_c1 | 3300050491 | Bacteria | 1888 |
| 163 | nmdc:mga0yw44_162429_c1 | 3300050492 | Bacteria | 1463 |
| 164 | nmdc:mga06z11_55004_c1 | 3300050494 | Bacteria | 2053 |
| 165 | nmdc:mga05p37_573_c1 | 3300050507 | Bacteria | 40363 |
| 166 | nmdc:mga09592_227_c1 | 3300050508 | Bacteria | 40641 |
| 167 | nmdc:mga0qj67_12480_c1 | 3300050509 | Bacteria | 6400 |
| 168 | nmdc:mga06r32_83_c1 | 3300050510 | Bacteria | 64174 |
| 169 | Ga0495595_0000441 | 3300053084 | Bacteria | 15723 |
| 170 | Ga0500644_0000143 | 3300053088 | Bacteria | 44243 |
| 171 | Ga0500556_0000502 | 3300053104 | Bacteria | 27054 |
| 172 | Ga0500593_000518 | 3300053117 | Bacteria | 15122 |
| 173 | Ga0501082_0248690 | 3300060353 | Bacteria | 1547 |
| 174 | Ga0530510_0036316 | 3300061734 | Bacteria | 3552 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300042435 | Ga0439434_0022438 | Ga0439434_0022438_998_1888 | 261 |
| 2 | 3300049741 | Ga0501079_0035779 | Ga0501079_0035779_38_889 | 283 |
| 3 | 3300041512 | Ga0451853_3517755 | Ga0451853_3517755_23_928 | 287 |
| 4 | 3300048913 | Ga0496110_0040008 | Ga0496110_0040008_13_921 | 293 |
| 5 | 3300042156 | Ga0439446_0060665 | Ga0439446_0060665_21_920 | 297 |
| 6 | 3300061734 | Ga0530510_0036316 | Ga0530510_0036316_26_928 | 300 |
| 7 | 3300009148 | Ga0105243_10031850 | Ga0105243_100318503 | 321 |
| 8 | 3300031911 | Ga0307412_10030697 | Ga0307412_100306973 | 322 |
| 9 | 3300032002 | Ga0307416_100310753 | Ga0307416_1003107532 | 322 |
| 10 | 3300017792 | Ga0163161_10016161 | Ga0163161_100161614 | 323 |
| 11 | 3300005456 | Ga0070678_100190300 | Ga0070678_1001903001 | 324 |
| 12 | 3300026121 | Ga0207683_10163343 | Ga0207683_101633432 | 324 |
| 13 | 3300041997 | Ga0439431_0001337 | Ga0439431_0001337_1240_2319 | 324 |
| 14 | 3300049578 | Ga0501042_0196758 | Ga0501042_0196758_108_1130 | 324 |
| 15 | 3300006844 | Ga0075428_100006897 | Ga0075428_1000068977 | 328 |
| 16 | 3300044901 | Ga0466960_0091565 | Ga0466960_0091565_33_1088 | 328 |
| 17 | 3300031548 | Ga0307408_100068408 | Ga0307408_1000684083 | 331 |
| 18 | 3300031731 | Ga0307405_10101680 | Ga0307405_101016802 | 331 |
| 19 | 3300031852 | Ga0307410_10106772 | Ga0307410_101067722 | 331 |
| 20 | 3300031903 | Ga0307407_10007993 | Ga0307407_100079934 | 331 |
| 21 | 3300032005 | Ga0307411_10051625 | Ga0307411_100516252 | 331 |
| 22 | 3300032126 | Ga0307415_100030757 | Ga0307415_1000307572 | 331 |
| 23 | 3300032002 | Ga0307416_100019467 | Ga0307416_1000194675 | 332 |
| 24 | 3300032005 | Ga0307411_10296973 | Ga0307411_102969732 | 333 |
| 25 | 3300042437 | Ga0439444_0004831 | Ga0439444_0004831_649_1650 | 333 |
| 26 | 3300042461 | Ga0439460_0014391 | Ga0439460_0014391_882_1883 | 333 |
| 27 | 3300026142 | Ga0207698_10394524 | Ga0207698_103945242 | 335 |
| 28 | iso_pu_bacteria | 2643221962 | 2645726476 | 336 |
| 29 | iso_pu_bacteria | 8047710418 | 8047713360 | 336 |
| 30 | 3300048917 | Ga0496114_0037796 | Ga0496114_0037796_1114_2196 | 337 |
| 31 | iso_pu_bacteria | 8003314358 | 8003315560 | 337 |
| 32 | iso_pu_bacteria | 8003314358 | 8003320778 | 337 |
| 33 | 3300005338 | Ga0068868_100068800 | Ga0068868_1000688002 | 339 |
| 34 | 3300009147 | Ga0114129_10033388 | Ga0114129_100333886 | 339 |
| 35 | 3300025937 | Ga0207669_10185030 | Ga0207669_101850301 | 339 |
| 36 | 3300026067 | Ga0207678_10284950 | Ga0207678_102849502 | 339 |
| 37 | 3300044765 | Ga0466970_0076305 | Ga0466970_0076305_685_1782 | 339 |
| 38 | 3300048905 | Ga0496102_0073319 | Ga0496102_0073319_1260_2312 | 339 |
| 39 | 3300048906 | Ga0496103_0044377 | Ga0496103_0044377_628_1680 | 339 |
| 40 | 3300048907 | Ga0496104_0086217 | Ga0496104_0086217_688_1740 | 339 |
| 41 | 3300048910 | Ga0496107_0060117 | Ga0496107_0060117_680_1732 | 339 |
| 42 | 3300048911 | Ga0496108_0298331 | Ga0496108_0298331_326_1378 | 339 |
| 43 | 3300048914 | Ga0496111_0079983 | Ga0496111_0079983_847_1899 | 339 |
| 44 | 3300048916 | Ga0496113_0106738 | Ga0496113_0106738_637_1689 | 339 |
| 45 | 3300049583 | Ga0501067_0087546 | Ga0501067_0087546_293_1345 | 339 |
| 46 | 3300049585 | Ga0501069_0054339 | Ga0501069_0054339_469_1521 | 339 |
| 47 | iso_pu_bacteria | 2899359706 | 2899360562 | 339 |
| 48 | 3300005547 | Ga0070693_100059933 | Ga0070693_1000599331 | 340 |
| 49 | 3300009176 | Ga0105242_10040782 | Ga0105242_100407822 | 340 |
| 50 | 3300009551 | Ga0105238_10137374 | Ga0105238_101373742 | 340 |
| 51 | 3300011119 | Ga0105246_10113476 | Ga0105246_101134762 | 340 |
| 52 | 3300026118 | Ga0207675_100332989 | Ga0207675_1003329892 | 340 |
| 53 | 3300026121 | Ga0207683_10152274 | Ga0207683_101522742 | 340 |
| 54 | 3300035086 | Ga0373934_0000004 | Ga0373934_0000004_20715_21737 | 340 |
| 55 | 3300035117 | Ga0373953_0001205 | Ga0373953_0001205_1072_2094 | 340 |
| 56 | 3300035118 | Ga0373954_0002885 | Ga0373954_0002885_2523_3545 | 340 |
| 57 | 3300035119 | Ga0373956_0000601 | Ga0373956_0000601_8466_9488 | 340 |
| 58 | 3300035120 | Ga0373957_0002328 | Ga0373957_0002328_3198_4220 | 340 |
| 59 | 3300035172 | Ga0373955_0000025 | Ga0373955_0000025_32952_33974 | 340 |
| 60 | 3300035410 | Ga0373924_0002276 | Ga0373924_0002276_4309_5331 | 340 |
| 61 | 3300035724 | Ga0373933_0000119 | Ga0373933_0000119_24359_25381 | 340 |
| 62 | 3300036401 | Ga0373937_0000306 | Ga0373937_0000306_20830_21852 | 340 |
| 63 | 3300046454 | Ga0495592_0000200 | Ga0495592_0000200_24378_25400 | 340 |
| 64 | 3300046462 | Ga0495651_0000151 | Ga0495651_0000151_25629_26651 | 340 |
| 65 | 3300046463 | Ga0495653_0006911 | Ga0495653_0006911_559_1581 | 340 |
| 66 | 3300046511 | Ga0495608_0000147 | Ga0495608_0000147_25594_26616 | 340 |
| 67 | 3300046516 | Ga0495628_0000753 | Ga0495628_0000753_20389_21411 | 340 |
| 68 | 3300046529 | Ga0495652_0000276 | Ga0495652_0000276_35218_36240 | 340 |
| 69 | 3300046536 | Ga0495587_0000045 | Ga0495587_0000045_23425_24447 | 340 |
| 70 | 3300046559 | Ga0495667_0000051 | Ga0495667_0000051_24352_25374 | 340 |
| 71 | 3300046675 | Ga0495657_0000044 | Ga0495657_0000044_23448_24470 | 340 |
| 72 | 3300046678 | Ga0495599_0000101 | Ga0495599_0000101_35100_36122 | 340 |
| 73 | 3300046679 | Ga0495623_0001529 | Ga0495623_0001529_6102_7124 | 340 |
| 74 | 3300046680 | Ga0495646_0036726 | Ga0495646_0036726_1046_2068 | 340 |
| 75 | 3300046809 | Ga0495600_0003438 | Ga0495600_0003438_4672_5694 | 340 |
| 76 | 3300047317 | Ga0495604_0000046 | Ga0495604_0000046_24358_25380 | 340 |
| 77 | 3300047322 | Ga0495680_0000108 | Ga0495680_0000108_24379_25401 | 340 |
| 78 | 3300047444 | Ga0495675_0000119 | Ga0495675_0000119_51654_52676 | 340 |
| 79 | 3300048088 | Ga0495602_0000167 | Ga0495602_0000167_8544_9566 | 340 |
| 80 | 3300053084 | Ga0495595_0000441 | Ga0495595_0000441_6188_7210 | 340 |
| 81 | iso_pu_bacteria | 2643221561 | 2643827656 | 340 |
| 82 | iso_pu_bacteria | 2643221696 | 2644534908 | 340 |
| 83 | 3300005347 | Ga0070668_100011923 | Ga0070668_1000119236 | 341 |
| 84 | 3300005455 | Ga0070663_100000117 | Ga0070663_10000011717 | 341 |
| 85 | 3300005937 | Ga0081455_10000352 | Ga0081455_1000035217 | 341 |
| 86 | 3300026067 | Ga0207678_10000093 | Ga0207678_1000009339 | 341 |
| 87 | iso_pu_bacteria | 2899370129 | 2899370343 | 341 |
| 88 | 3300006844 | Ga0075428_100004037 | Ga0075428_1000040375 | 342 |
| 89 | 3300006846 | Ga0075430_100007755 | Ga0075430_1000077553 | 342 |
| 90 | 3300006847 | Ga0075431_100042426 | Ga0075431_1000424265 | 342 |
| 91 | 3300006852 | Ga0075433_10071563 | Ga0075433_100715632 | 342 |
| 92 | 3300006880 | Ga0075429_100001988 | Ga0075429_1000019884 | 342 |
| 93 | 3300009094 | Ga0111539_10198168 | Ga0111539_101981682 | 342 |
| 94 | 3300009147 | Ga0114129_10016875 | Ga0114129_100168751 | 342 |
| 95 | 3300013307 | Ga0157372_10085731 | Ga0157372_100857314 | 342 |
| 96 | 3300013307 | Ga0157372_10156290 | Ga0157372_101562902 | 342 |
| 97 | 3300025932 | Ga0207690_10051330 | Ga0207690_100513301 | 342 |
| 98 | 3300038443 | Ga0395901_0061413 | Ga0395901_0061413_1246_2274 | 342 |
| 99 | 3300044901 | Ga0466960_0014478 | Ga0466960_0014478_1194_2222 | 342 |
| 100 | 3300049583 | Ga0501067_0085400 | Ga0501067_0085400_430_1509 | 342 |
| 101 | 3300049585 | Ga0501069_0148136 | Ga0501069_0148136_129_1208 | 342 |
| 102 | 3300050507 | nmdc:mga05p37_573_c1 | nmdc:mga05p37_573_c1_25591_26655 | 342 |
| 103 | 3300050508 | nmdc:mga09592_227_c1 | nmdc:mga09592_227_c1_21341_22405 | 342 |
| 104 | 3300050509 | nmdc:mga0qj67_12480_c1 | nmdc:mga0qj67_12480_c1_811_1875 | 342 |
| 105 | 3300050510 | nmdc:mga06r32_83_c1 | nmdc:mga06r32_83_c1_53042_54106 | 342 |
| 106 | iso_pu_bacteria | 2738541305 | 2738869556 | 342 |
| 107 | iso_pu_bacteria | 2842888712 | 2842889520 | 342 |
| 108 | 3300006038 | Ga0075365_10117858 | Ga0075365_101178582 | 344 |
| 109 | 3300032002 | Ga0307416_100246331 | Ga0307416_1002463313 | 344 |
| 110 | 3300053104 | Ga0500556_0000502 | Ga0500556_0000502_17457_18521 | 344 |
| 111 | 3300025909 | Ga0207705_10098078 | Ga0207705_100980782 | 345 |
| 112 | 3300031731 | Ga0307405_10081826 | Ga0307405_100818263 | 345 |
| 113 | 3300031903 | Ga0307407_10052894 | Ga0307407_100528942 | 345 |
| 114 | 3300031995 | Ga0307409_100041439 | Ga0307409_1000414394 | 345 |
| 115 | 3300032002 | Ga0307416_100213614 | Ga0307416_1002136142 | 345 |
| 116 | 3300032005 | Ga0307411_10028049 | Ga0307411_100280493 | 345 |
| 117 | 3300033180 | Ga0307510_10066767 | Ga0307510_100667673 | 345 |
| 118 | 3300044765 | Ga0466970_0018666 | Ga0466970_0018666_1190_2230 | 345 |
| 119 | iso_pu_bacteria | 2643221961 | 2645719578 | 345 |
| 120 | 3300005344 | Ga0070661_100216928 | Ga0070661_1002169282 | 346 |
| 121 | 3300005564 | Ga0070664_100149394 | Ga0070664_1001493942 | 346 |
| 122 | 3300005937 | Ga0081455_10058549 | Ga0081455_100585491 | 346 |
| 123 | 3300025919 | Ga0207657_10101326 | Ga0207657_101013262 | 346 |
| 124 | 3300025945 | Ga0207679_10128018 | Ga0207679_101280182 | 346 |
| 125 | 3300026075 | Ga0207708_10333369 | Ga0207708_103333691 | 346 |
| 126 | 3300049570 | Ga0501033_0061086 | Ga0501033_0061086_1688_2731 | 346 |
| 127 | 3300049574 | Ga0501038_0045722 | Ga0501038_0045722_879_1922 | 346 |
| 128 | 3300049576 | Ga0501040_0014706 | Ga0501040_0014706_1498_2541 | 346 |
| 129 | 3300049577 | Ga0501041_0001871 | Ga0501041_0001871_8191_9234 | 346 |
| 130 | 3300049578 | Ga0501042_0036364 | Ga0501042_0036364_1177_2220 | 346 |
| 131 | 3300049580 | Ga0501046_0011775 | Ga0501046_0011775_2170_3213 | 346 |
| 132 | 3300049582 | Ga0501048_0009795 | Ga0501048_0009795_4310_5353 | 346 |
| 133 | 3300049584 | Ga0501068_0016754 | Ga0501068_0016754_1177_2220 | 346 |
| 134 | 3300049586 | Ga0501070_0368601 | Ga0501070_0368601_10_1092 | 346 |
| 135 | 3300049588 | Ga0501072_0002851 | Ga0501072_0002851_1177_2220 | 346 |
| 136 | 3300049592 | Ga0501076_0012700 | Ga0501076_0012700_2722_3765 | 346 |
| 137 | 3300049593 | Ga0501077_0005331 | Ga0501077_0005331_6712_7755 | 346 |
| 138 | 3300049743 | Ga0501081_0010954 | Ga0501081_0010954_3046_4089 | 346 |
| 139 | 3300049822 | Ga0501035_0140160 | Ga0501035_0140160_805_1848 | 346 |
| 140 | 3300053088 | Ga0500644_0000143 | Ga0500644_0000143_12802_13881 | 346 |
| 141 | 3300060353 | Ga0501082_0248690 | Ga0501082_0248690_441_1484 | 346 |
| 142 | 3300048917 | Ga0496114_0065214 | Ga0496114_0065214_729_1778 | 347 |
| 143 | 3300049583 | Ga0501067_0025041 | Ga0501067_0025041_841_1887 | 347 |
| 144 | 3300049584 | Ga0501068_0220207 | Ga0501068_0220207_105_1154 | 347 |
| 145 | 3300005981 | Ga0081538_10063080 | Ga0081538_100630803 | 348 |
| 146 | 3300006038 | Ga0075365_10132894 | Ga0075365_101328942 | 348 |
| 147 | iso_pu_bacteria | 2643221615 | 2644091522 | 348 |
| 148 | iso_pu_bacteria | 2643221657 | 2644321325 | 348 |
| 149 | iso_pu_bacteria | 2857481737 | 2857484464 | 348 |
| 150 | 3300005367 | Ga0070667_100007122 | Ga0070667_1000071227 | 349 |
| 151 | 3300005843 | Ga0068860_100003085 | Ga0068860_10000308512 | 349 |
| 152 | 3300006038 | Ga0075365_10010165 | Ga0075365_100101656 | 349 |
| 153 | 3300006038 | Ga0075365_10021072 | Ga0075365_100210722 | 349 |
| 154 | 3300006042 | Ga0075368_10003264 | Ga0075368_100032645 | 349 |
| 155 | 3300006353 | Ga0075370_10040271 | Ga0075370_100402712 | 349 |
| 156 | 3300025986 | Ga0207658_10013057 | Ga0207658_100130573 | 349 |
| 157 | 3300028381 | Ga0268264_10001626 | Ga0268264_100016269 | 349 |
| 158 | 3300031995 | Ga0307409_100114838 | Ga0307409_1001148382 | 349 |
| 159 | 3300044901 | Ga0466960_0005256 | Ga0466960_0005256_2872_3927 | 349 |
| 160 | 3300050491 | nmdc:mga00v17_93823_c1 | nmdc:mga00v17_93823_c1_522_1613 | 349 |
| 161 | 3300050492 | nmdc:mga0yw44_162429_c1 | nmdc:mga0yw44_162429_c1_45_1136 | 349 |
| 162 | 3300050494 | nmdc:mga06z11_55004_c1 | nmdc:mga06z11_55004_c1_543_1625 | 349 |
| 163 | 3300053117 | Ga0500593_000518 | Ga0500593_000518_4539_5633 | 349 |
| 164 | 3300049587 | Ga0501071_0200282 | Ga0501071_0200282_282_1379 | 350 |
| 165 | iso_pu_bacteria | 2582580736 | 2583150249 | 354 |
| 166 | iso_pu_bacteria | 2818991318 | 2819428287 | 354 |
| 167 | 3300048908 | Ga0496105_0171259 | Ga0496105_0171259_161_1234 | 355 |
| 168 | 3300048917 | Ga0496114_0122923 | Ga0496114_0122923_995_2068 | 355 |
| 169 | 3300005535 | Ga0070684_100416078 | Ga0070684_1004160781 | 356 |
| 170 | 3300013308 | Ga0157375_10143397 | Ga0157375_101433972 | 356 |
| 171 | 3300044658 | Ga0466972_0030141 | Ga0466972_0030141_192_1268 | 356 |
| 172 | 3300044658 | Ga0466972_0037600 | Ga0466972_0037600_1113_2189 | 356 |
| 173 | 3300044842 | Ga0466957_0236522 | Ga0466957_0236522_81_1157 | 356 |
| 174 | iso_pu_bacteria | 2643221711 | 2644611694 | 356 |
| 175 | iso_pu_bacteria | 2818991458 | 2819664654 | 356 |
| 176 | iso_pu_bacteria | 2835188231 | 2835188672 | 356 |
| 177 | 3300045976 | Ga0466967_0061602 | Ga0466967_0061602_879_1988 | 357 |
| 178 | 3300048907 | Ga0496104_0034858 | Ga0496104_0034858_1831_2907 | 357 |
| 179 | 3300048908 | Ga0496105_0115392 | Ga0496105_0115392_254_1330 | 357 |
| 180 | 3300048912 | Ga0496109_0291770 | Ga0496109_0291770_185_1261 | 357 |
| 181 | 3300048914 | Ga0496111_0039422 | Ga0496111_0039422_391_1467 | 357 |
| 182 | 3300048916 | Ga0496113_0035584 | Ga0496113_0035584_2348_3424 | 357 |
| 183 | iso_pu_bacteria | 2811994882 | 2812372835 | 357 |
| 184 | iso_pu_bacteria | 2818991462 | 2819689648 | 359 |
| 185 | iso_pu_bacteria | 2818991469 | 2819726800 | 359 |
| 186 | 3300003578 | Ga0006562J51391_1021542 | Ga0006562J51391_10215424 | 360 |
| 187 | 3300003578 | Ga0006562J51391_1021543 | Ga0006562J51391_10215432 | 360 |
| 188 | 3300005535 | Ga0070684_100159006 | Ga0070684_1001590063 | 360 |
| 189 | 3300038443 | Ga0395901_0035183 | Ga0395901_0035183_1041_2123 | 360 |
| 190 | 3300038443 | Ga0395901_0534956 | Ga0395901_0534956_36_1118 | 360 |
| 191 | 3300048903 | Ga0496100_0068909 | Ga0496100_0068909_164_1246 | 360 |
| 192 | 3300048904 | Ga0496101_0027862 | Ga0496101_0027862_458_1540 | 360 |
| 193 | 3300048906 | Ga0496103_0043841 | Ga0496103_0043841_877_1959 | 360 |
| 194 | 3300048912 | Ga0496109_0247555 | Ga0496109_0247555_278_1360 | 360 |
| 195 | 3300048916 | Ga0496113_0217535 | Ga0496113_0217535_35_1117 | 360 |
| 196 | 3300048917 | Ga0496114_0081104 | Ga0496114_0081104_1203_2285 | 360 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6jul-assembly1.cif.gz_F | msdpo4-dna complex 1 | 0.98 | 6 | 346 |
| 6jum-assembly2.cif.gz_F | msdpo4-dna complex 2 | 0.9799 | 6 | 346 |
| 6jur-assembly2.cif.gz_F | msdpo4-dna complex 5 | 0.973 | 6 | 346 |
| 6jun-assembly2.cif.gz_A | msdpo4-dna complex 3 | 0.9666 | 6 | 346 |
| 6jul-assembly1.cif.gz_F | msdpo4-dna complex 1 | 0.9605 | 6 | 346 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FWZ5_4_63_3.40.1170.60 | Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; | 0.9798 | 19 | 78 | 3.40.1170.60 |
| af_P9WNT1_245_346_3.30.1490.100 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain | 0.9738 | 242 | 343 | 3.30.1490.100 |
| 4dezA03 | Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain | 0.9661 | 169 | 238 | 1.10.150.20 |
| af_P9WNT1_245_346_3.30.1490.100 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain | 0.9645 | 242 | 343 | 3.30.1490.100 |
| af_O74944_370_477_3.30.1490.100 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain | 0.9483 | 244 | 341 | 3.30.1490.100 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A521MHK7-F1-model_v4 | DNA polymerase IV (EC 2.7.7.7) | 0.9858 | 1 | 184 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A0U1DDC5-F1-model_v4 | DNA polymerase IV | 0.9846 | 48 | 209 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A1P8YK57-F1-model_v4 | ImpB/mucB/samB family protein | 0.9755 | 13 | 83 |
GO:0003887
GO:0005829 GO:0009432 GO:0042276 |
| AF-A0A0Q9KLB4-F1-model_v4 | DNA-directed DNA polymerase (EC 2.7.7.7) | 0.9717 | 10 | 348 |
GO:0003684
GO:0003887 GO:0005829 GO:0006260 GO:0009432 GO:0042276 GO:0046872 |
| AF-A0A365ZYB8-F1-model_v4 | DNA polymerase IV (Pol IV) (EC 2.7.7.7) | 0.9704 | 1 | 345 |
GO:0000287
GO:0003684 GO:0003887 GO:0005829 GO:0006261 GO:0009432 GO:0042276 |
Predicted Structure (AlphaFold2)
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