F301700

General Info

Members Datasets Scaffolds Average Seq Length
196 125 392 427

Family's Representative Sequence

Representative Sequence 3300026075|Ga0207708_10002697|Ga0207708_100026971
Length 494
Sequence MAGSTVPTHARATSRSPTKPQLTFAGSTPPAGTAPRLGPRRPSGVGPLEWTPVIPRPPLPPGPYLVVGLARSGVAAALTLRARGAEVAGVDSGAVAPEVAERLAAAGATVHAQDDGLALLARAGSVIKSPGVPKEAPVIAAAHERGIPVLGEYETGWRLLPEHEFIAVTGSNGKTTTVELIGHLHREAALPVKVAGNVGTALTGLPGTLAPGTIVVAEASSFQLEDTEAFAPDAAVLLNLAEDHLDRHGTFEAYRAAKLEVFARQPNEAVAVAPLGLGVEDLGGCARRVCFGAGPGAELADRAGQLWWGEQPLLSVSEIGLRGAHNVQNAMAAAAVCLARGVDAEAVRAGLHSFSGLAHRLEEVATVGGVLYVNDSKATNVASALVGIDSFPGGVHAILGGRSKGGAFTELVPAVAERCRAAYLIGETAAELAEALAPAGVPLRECGDLERAVAAAPGDVVLLSPACPSYDQYVSYEQRGDHFRALARALISST

Samples

Sample ID Description Type Environment
1 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
75 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
88 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
89 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
90 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
93 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
115 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
116 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
123 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
124 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
125 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 10.2
Rhizosphere 89.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207708_10002697 3300026075 Bacteria 13042
2 JGI25407J50210_10006938 3300003373 Bacteria 2832
3 Ga0070658_10164235 3300005327 Bacteria 1864
4 Ga0070683_100121235 3300005329 Bacteria 2470
5 Ga0068869_100128172 3300005334 Bacteria 1948
6 Ga0070660_100004617 3300005339 Bacteria 9534
7 Ga0070660_100017239 3300005339 Bacteria 5262
8 Ga0070668_100061048 3300005347 Bacteria 2920
9 Ga0070659_100014500 3300005366 Bacteria 5890
10 Ga0070659_100209416 3300005366 Bacteria 1607
11 Ga0070663_100126458 3300005455 Bacteria 1937
12 Ga0070662_100027938 3300005457 Bacteria 3922
13 Ga0070681_10009545 3300005458 Bacteria 9548
14 Ga0070681_10143106 3300005458 Bacteria 2320
15 Ga0068867_100163553 3300005459 Bacteria 1756
16 Ga0070679_100104253 3300005530 Bacteria 2822
17 Ga0070679_100222362 3300005530 Bacteria 1849
18 Ga0070684_100011552 3300005535 Bacteria 7035
19 Ga0070665_100003396 3300005548 Bacteria 17017
20 Ga0068857_100087689 3300005577 Bacteria 2784
21 Ga0070702_100012789 3300005615 Bacteria 4221
22 Ga0070702_100061893 3300005615 Bacteria 2180
23 Ga0068852_100019129 3300005616 Bacteria 5412
24 Ga0068866_10004167 3300005718 Bacteria 5931
25 Ga0068861_100003395 3300005719 Bacteria 10567
26 Ga0068860_100139076 3300005843 Bacteria 2333
27 Ga0081455_10021452 3300005937 Bacteria 6059
28 Ga0081538_10000386 3300005981 Bacteria 50093
29 Ga0081538_10000909 3300005981 Bacteria 31949
30 Ga0081538_10001175 3300005981 Bacteria 27654
31 Ga0081538_10002030 3300005981 Bacteria 20235
32 Ga0081538_10003060 3300005981 Bacteria 15930
33 Ga0081538_10008058 3300005981 Bacteria 9004
34 Ga0081538_10019828 3300005981 Bacteria 4976
35 Ga0081538_10026453 3300005981 Bacteria 4057
36 Ga0081538_10054813 3300005981 Bacteria 2353
37 Ga0081538_10070072 3300005981 Bacteria 1938
38 Ga0081540_1000554 3300005983 Bacteria 36225
39 Ga0081539_10004699 3300005985 Bacteria 14811
40 Ga0081539_10010308 3300005985 Bacteria 7615
41 Ga0081539_10026350 3300005985 Bacteria 3711
42 Ga0070712_100000002 3300006175 Bacteria 288475
43 Ga0070712_100062795 3300006175 Bacteria 2628
44 Ga0075428_100031072 3300006844 Bacteria 5904
45 Ga0075428_100128026 3300006844 Bacteria 2762
46 Ga0075428_100133860 3300006844 Bacteria 2696
47 Ga0075428_100215064 3300006844 Bacteria 2077
48 Ga0075430_100016935 3300006846 Bacteria 6207
49 Ga0075430_100051440 3300006846 Bacteria 3471
50 Ga0075431_100037843 3300006847 Bacteria 4968
51 Ga0075431_100088867 3300006847 Bacteria 3189
52 Ga0075431_100223217 3300006847 Bacteria 1922
53 Ga0075433_10040974 3300006852 Bacteria 4011
54 Ga0075429_100006971 3300006880 Bacteria 9818
55 Ga0068865_100187430 3300006881 Bacteria 1597
56 Ga0105240_10274096 3300009093 Bacteria 1941
57 Ga0111539_10010764 3300009094 Bacteria 11513
58 Ga0111539_10040424 3300009094 Bacteria 5615
59 Ga0111539_10049157 3300009094 Bacteria 5032
60 Ga0111539_10085124 3300009094 Bacteria 3716
61 Ga0105245_10002793 3300009098 Bacteria 15710
62 Ga0105245_10077885 3300009098 Bacteria 3024
63 Ga0105245_10220058 3300009098 Bacteria 1831
64 Ga0114129_10003411 3300009147 Bacteria 22329
65 Ga0114129_10016855 3300009147 Bacteria 10404
66 Ga0114129_10328464 3300009147 Bacteria 2031
67 Ga0105243_10004317 3300009148 Bacteria 11255
68 Ga0105243_10057736 3300009148 Bacteria 3091
69 Ga0105242_10006177 3300009176 Bacteria 9227
70 Ga0105237_10000495 3300009545 Bacteria 55778
71 Ga0105237_10035512 3300009545 Bacteria 5044
72 Ga0105249_10003775 3300009553 Bacteria 13077
73 Ga0105239_10035912 3300010375 Bacteria 5441
74 Ga0157370_10032944 3300013104 Bacteria 5054
75 Ga0157369_10014682 3300013105 Bacteria 8838
76 Ga0163162_10059346 3300013306 Bacteria 3857
77 Ga0157372_10094987 3300013307 Bacteria 3396
78 Ga0157372_10185954 3300013307 Bacteria 2406
79 Ga0163161_10050414 3300017792 Bacteria 3012
80 Ga0207695_10059546 3300025913 Bacteria 3959
81 Ga0207671_10002108 3300025914 Bacteria 21711
82 Ga0207693_10000014 3300025915 Bacteria 148984
83 Ga0207693_10068499 3300025915 Bacteria 2777
84 Ga0207657_10006353 3300025919 Bacteria 12276
85 Ga0207649_10015485 3300025920 Bacteria 4285
86 Ga0207652_10007954 3300025921 Bacteria 8509
87 Ga0207687_10023419 3300025927 Bacteria 4116
88 Ga0207687_10078694 3300025927 Bacteria 2374
89 Ga0207644_10101969 3300025931 Bacteria 2158
90 Ga0207690_10007500 3300025932 Bacteria 6475
91 Ga0207690_10144303 3300025932 Bacteria 1758
92 Ga0207690_10178216 3300025932 Bacteria 1598
93 Ga0207706_10003250 3300025933 Bacteria 15577
94 Ga0207709_10017776 3300025935 Bacteria 3974
95 Ga0207709_10078423 3300025935 Bacteria 2120
96 Ga0207669_10110950 3300025937 Bacteria 1838
97 Ga0207704_10063057 3300025938 Bacteria 2308
98 Ga0207711_10206064 3300025941 Bacteria 1796
99 Ga0207689_10145564 3300025942 Bacteria 1952
100 Ga0207661_10001048 3300025944 Bacteria 18352
101 Ga0207661_10104629 3300025944 Bacteria 2384
102 Ga0207712_10024893 3300025961 Bacteria 3971
103 Ga0207640_10006521 3300025981 Bacteria 6406
104 Ga0207708_10017362 3300026075 Bacteria 5417
105 Ga0207708_10050369 3300026075 Bacteria 3170
106 Ga0207708_10108154 3300026075 Bacteria 2156
107 Ga0207702_10013009 3300026078 Bacteria 6921
108 Ga0207641_10240505 3300026088 Bacteria 1687
109 Ga0207674_10082203 3300026116 Bacteria 3222
110 Ga0207675_100000091 3300026118 Bacteria 70559
111 Ga0207675_100104211 3300026118 Bacteria 2673
112 Ga0207683_10087761 3300026121 Bacteria 2766
113 Ga0207698_10007047 3300026142 Bacteria 7038
114 Ga0207428_10046051 3300027907 Bacteria 3509
115 Ga0207428_10185108 3300027907 Bacteria 1572
116 Ga0268266_10002916 3300028379 Bacteria 17695
117 Ga0268264_10315920 3300028381 Bacteria 1475
118 Ga0265319_1000323 3300028563 Bacteria 35477
119 Ga0307410_10038482 3300031852 Bacteria 3134
120 Ga0307410_10049870 3300031852 Bacteria 2812
121 Ga0307406_10028419 3300031901 Bacteria 3379
122 Ga0307409_100024540 3300031995 Bacteria 4207
123 Ga0307409_100061182 3300031995 Bacteria 2941
124 Ga0307416_100050665 3300032002 Bacteria 3311
125 Ga0307416_100125066 3300032002 Bacteria 2302
126 Ga0307415_100009741 3300032126 Bacteria 5406
127 Ga0307415_100236797 3300032126 Bacteria 1474
128 Ga0373946_0020371 3300035171 Bacteria 2563
129 Ga0373947_0084521 3300035725 Bacteria 1970
130 Ga0373925_0066223 3300037068 Bacteria 2723
131 Ga0395901_0074978 3300038443 Bacteria 3529
132 Ga0466963_0080205 3300044694 Bacteria 2209
133 Ga0466960_0023296 3300044901 Bacteria 2779
134 Ga0466967_0010276 3300045976 Bacteria 7007
135 Ga0466967_0015860 3300045976 Bacteria 5922
136 Ga0466967_0030867 3300045976 Bacteria 4502
137 Ga0466967_0035725 3300045976 Bacteria 4234
138 Ga0466967_0299032 3300045976 Bacteria 1548
139 Ga0495653_0000982 3300046463 Bacteria 21923
140 Ga0495605_0057538 3300046474 Bacteria 1871
141 Ga0495664_0000063 3300046477 Bacteria 51031
142 Ga0495618_0000113 3300046514 Bacteria 59243
143 Ga0495630_0005323 3300046517 Bacteria 9080
144 Ga0495645_0001589 3300046543 Bacteria 15356
145 Ga0495657_0000013 3300046675 Bacteria 195590
146 Ga0496100_0037259 3300048903 Bacteria 3073
147 Ga0496101_0011641 3300048904 Bacteria 5843
148 Ga0496102_0000002 3300048905 Bacteria 814588
149 Ga0496103_0000066 3300048906 Bacteria 126247
150 Ga0496106_0014480 3300048909 Bacteria 5827
151 Ga0496106_0193593 3300048909 Bacteria 1617
152 Ga0496107_0005334 3300048910 Bacteria 8791
153 Ga0496108_0000341 3300048911 Bacteria 39335
154 Ga0496108_0035859 3300048911 Bacteria 4125
155 Ga0496109_0000172 3300048912 Bacteria 64023
156 Ga0496109_0007758 3300048912 Bacteria 9087
157 Ga0496109_0040846 3300048912 Bacteria 4202
158 Ga0496109_0065254 3300048912 Bacteria 3333
159 Ga0496109_0141935 3300048912 Bacteria 2246
160 Ga0496110_0066353 3300048913 Bacteria 3191
161 Ga0496111_0015366 3300048914 Bacteria 5252
162 Ga0496112_0164071 3300048915 Bacteria 2188
163 Ga0496113_0006508 3300048916 Bacteria 7414
164 Ga0496113_0132920 3300048916 Bacteria 1954
165 Ga0496114_0137456 3300048917 Bacteria 2114
166 Ga0496121_0002111 3300048924 Bacteria 31257
167 Ga0501036_0068728 3300049572 Bacteria 2998
168 Ga0501040_0186570 3300049576 Bacteria 1471
169 Ga0501042_0058701 3300049578 Bacteria 2747
170 Ga0501071_0025725 3300049587 Bacteria 4124
171 Ga0501075_0031301 3300049591 Bacteria 3948
172 Ga0501075_0091329 3300049591 Bacteria 2311
173 Ga0501076_0007800 3300049592 Bacteria 7804
174 Ga0501076_0025978 3300049592 Bacteria 4533
175 Ga0501077_0021231 3300049593 Bacteria 4110
176 Ga0501077_0179755 3300049593 Bacteria 1345
177 Ga0501081_0073975 3300049743 Bacteria 2377
178 Ga0501045_0041738 3300049824 Bacteria 3338
179 nmdc:mga05p37_106278_c1 3300050507 Bacteria 3453
180 nmdc:mga05p37_15612_c1 3300050507 Bacteria 9126
181 nmdc:mga05p37_91315_c1 3300050507 Bacteria 3752
182 nmdc:mga0qj67_37380_c1 3300050509 Bacteria 3803
183 nmdc:mga0qj67_755_c1 3300050509 Bacteria 21982
184 nmdc:mga06r32_18144_c1 3300050510 Bacteria 6437
185 nmdc:mga06r32_215098_c1 3300050510 Bacteria 1910
186 nmdc:mga06r32_36032_c1 3300050510 Bacteria 4672
187 nmdc:mga08y16_118880_c1 3300050511 Bacteria 2751
188 nmdc:mga08y16_200957_c1 3300050511 Bacteria 2065
189 nmdc:mga08y16_437554_c1 3300050511 Bacteria 1335
190 nmdc:mga0a205_36871_c1 3300050515 Bacteria 4700
191 Ga0495601_0000852 3300053077 Bacteria 16593
192 Ga0495601_0032830 3300053077 Bacteria 3233
193 Ga0495612_0000072 3300053078 Bacteria 45740
194 Ga0495619_0000010 3300053085 Bacteria 302390
195 Ga0530510_0038574 3300061734 Bacteria 3449
196 Ga0530510_0113051 3300061734 Bacteria 1990
197 Ga0207708_10002697
198 JGI25407J50210_10006938
199 Ga0070658_10164235
200 Ga0070683_100121235
201 Ga0068869_100128172
202 Ga0070660_100004617
203 Ga0070660_100017239
204 Ga0070668_100061048
205 Ga0070659_100014500
206 Ga0070659_100209416
207 Ga0070663_100126458
208 Ga0070662_100027938
209 Ga0070681_10009545
210 Ga0070681_10143106
211 Ga0068867_100163553
212 Ga0070679_100104253
213 Ga0070679_100222362
214 Ga0070684_100011552
215 Ga0070665_100003396
216 Ga0068857_100087689
217 Ga0070702_100012789
218 Ga0070702_100061893
219 Ga0068852_100019129
220 Ga0068866_10004167
221 Ga0068861_100003395
222 Ga0068860_100139076
223 Ga0081455_10021452
224 Ga0081538_10000386
225 Ga0081538_10000909
226 Ga0081538_10001175
227 Ga0081538_10002030
228 Ga0081538_10003060
229 Ga0081538_10008058
230 Ga0081538_10019828
231 Ga0081538_10026453
232 Ga0081538_10054813
233 Ga0081538_10070072
234 Ga0081540_1000554
235 Ga0081539_10004699
236 Ga0081539_10010308
237 Ga0081539_10026350
238 Ga0070712_100000002
239 Ga0070712_100062795
240 Ga0075428_100031072
241 Ga0075428_100128026
242 Ga0075428_100133860
243 Ga0075428_100215064
244 Ga0075430_100016935
245 Ga0075430_100051440
246 Ga0075431_100037843
247 Ga0075431_100088867
248 Ga0075431_100223217
249 Ga0075433_10040974
250 Ga0075429_100006971
251 Ga0068865_100187430
252 Ga0105240_10274096
253 Ga0111539_10010764
254 Ga0111539_10040424
255 Ga0111539_10049157
256 Ga0111539_10085124
257 Ga0105245_10002793
258 Ga0105245_10077885
259 Ga0105245_10220058
260 Ga0114129_10003411
261 Ga0114129_10016855
262 Ga0114129_10328464
263 Ga0105243_10004317
264 Ga0105243_10057736
265 Ga0105242_10006177
266 Ga0105237_10000495
267 Ga0105237_10035512
268 Ga0105249_10003775
269 Ga0105239_10035912
270 Ga0157370_10032944
271 Ga0157369_10014682
272 Ga0163162_10059346
273 Ga0157372_10094987
274 Ga0157372_10185954
275 Ga0163161_10050414
276 Ga0207695_10059546
277 Ga0207671_10002108
278 Ga0207693_10000014
279 Ga0207693_10068499
280 Ga0207657_10006353
281 Ga0207649_10015485
282 Ga0207652_10007954
283 Ga0207687_10023419
284 Ga0207687_10078694
285 Ga0207644_10101969
286 Ga0207690_10007500
287 Ga0207690_10144303
288 Ga0207690_10178216
289 Ga0207706_10003250
290 Ga0207709_10017776
291 Ga0207709_10078423
292 Ga0207669_10110950
293 Ga0207704_10063057
294 Ga0207711_10206064
295 Ga0207689_10145564
296 Ga0207661_10001048
297 Ga0207661_10104629
298 Ga0207712_10024893
299 Ga0207640_10006521
300 Ga0207708_10017362
301 Ga0207708_10050369
302 Ga0207708_10108154
303 Ga0207702_10013009
304 Ga0207641_10240505
305 Ga0207674_10082203
306 Ga0207675_100000091
307 Ga0207675_100104211
308 Ga0207683_10087761
309 Ga0207698_10007047
310 Ga0207428_10046051
311 Ga0207428_10185108
312 Ga0268266_10002916
313 Ga0268264_10315920
314 Ga0265319_1000323
315 Ga0307410_10038482
316 Ga0307410_10049870
317 Ga0307406_10028419
318 Ga0307409_100024540
319 Ga0307409_100061182
320 Ga0307416_100050665
321 Ga0307416_100125066
322 Ga0307415_100009741
323 Ga0307415_100236797
324 Ga0373946_0020371
325 Ga0373947_0084521
326 Ga0373925_0066223
327 Ga0395901_0074978
328 Ga0466963_0080205
329 Ga0466960_0023296
330 Ga0466967_0010276
331 Ga0466967_0015860
332 Ga0466967_0030867
333 Ga0466967_0035725
334 Ga0466967_0299032
335 Ga0495653_0000982
336 Ga0495605_0057538
337 Ga0495664_0000063
338 Ga0495618_0000113
339 Ga0495630_0005323
340 Ga0495645_0001589
341 Ga0495657_0000013
342 Ga0496100_0037259
343 Ga0496101_0011641
344 Ga0496102_0000002
345 Ga0496103_0000066
346 Ga0496106_0014480
347 Ga0496106_0193593
348 Ga0496107_0005334
349 Ga0496108_0000341
350 Ga0496108_0035859
351 Ga0496109_0000172
352 Ga0496109_0007758
353 Ga0496109_0040846
354 Ga0496109_0065254
355 Ga0496109_0141935
356 Ga0496110_0066353
357 Ga0496111_0015366
358 Ga0496112_0164071
359 Ga0496113_0006508
360 Ga0496113_0132920
361 Ga0496114_0137456
362 Ga0496121_0002111
363 Ga0501036_0068728
364 Ga0501040_0186570
365 Ga0501042_0058701
366 Ga0501071_0025725
367 Ga0501075_0031301
368 Ga0501075_0091329
369 Ga0501076_0007800
370 Ga0501076_0025978
371 Ga0501077_0021231
372 Ga0501077_0179755
373 Ga0501081_0073975
374 Ga0501045_0041738
375 nmdc:mga05p37_106278_c1
376 nmdc:mga05p37_15612_c1
377 nmdc:mga05p37_91315_c1
378 nmdc:mga0qj67_37380_c1
379 nmdc:mga0qj67_755_c1
380 nmdc:mga06r32_18144_c1
381 nmdc:mga06r32_215098_c1
382 nmdc:mga06r32_36032_c1
383 nmdc:mga08y16_118880_c1
384 nmdc:mga08y16_200957_c1
385 nmdc:mga08y16_437554_c1
386 nmdc:mga0a205_36871_c1
387 Ga0495601_0000852
388 Ga0495601_0032830
389 Ga0495612_0000072
390 Ga0495619_0000010
391 Ga0530510_0038574
392 Ga0530510_0113051

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

359

467

0.96

PF21799

MurD-like_N

Mur ligase MurD-like, N-terminal domain

63

151

0.9

PF08245

Mur_ligase_M

Mur ligase middle domain

168

337

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ti7-assembly1.cif.gz_A crystal structure of udp-n-acetylmuramoylalanine-d-glutamate ligase from acinetobacter baumannii ab5075-uw in complex with adp 0.9064 11 425
1el5-assembly1.cif.gz_A complex of monomeric sarcosine oxidase with the inhibitor dimethylglycine 0.8937 11 41
2y68-assembly1.cif.gz_A structure-based design of a new series of d-glutamic acid-based inhibitors of bacterial murd ligase 0.8826 11 425
8dp2-assembly1.cif.gz_A crystal structure of udp-n-acetylmuramoylalanine--d-glutamate ligase (murd) from pseudomonas aeruginosa pao1 in complex with uma (uridine-5'-diphosphate-n-acetylmuramoyl-l-alanine) 0.8819 11 425
2jff-assembly1.cif.gz_A crystal structure of murd ligase in complex with d-glu containing sulfonamide inhibitor 0.8809 11 425
ID Description Score Start End Superfamily
3lk7A03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9394 297 424 3.90.190.20
af_Q2FZ92_101_311_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9337 92 294 3.40.1190.10
af_Q2FZ92_312_442_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.911 295 425 3.90.190.20
af_Q2FZ92_312_442_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9043 295 425 3.90.190.20
4bucB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9008 296 424 3.90.190.20
ID Description Score Start End GO Terms
AF-A0A538EKX1-F1-model_v4 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) 0.9863 3 425 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301
GO:0071555
AF-A0A538EKX1-F1-model_v4 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) 0.9726 3 425 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301
GO:0071555
AF-A0A7X9JFX0-F1-model_v4 UDP-N-acetylmuramoylalanine--D-glutamate ligase 0.9722 309 425 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A5C7V4G3-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9694 299 425 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A359E2J3-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9687 300 425 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301

Map